pycom07g08360

TMV resistance protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
7746669 .. 7749786
3118 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g08360.2

Sequence Viewer

Length: 2682 bp
ATGGACCAATTAGATGCAATACTAAAGATGAAAGATCGGTTTTATCCTGGAAGTAAGATACTTATAACAACTAGGCGTGAAAGGTTGCTAAAGGCACATCAAGTTACAAAGGTGCAGAGATTTGAAACTTTGGATTACAATCAATCATTAGAGCTTTTCAGCTGGCATGCATTTGGCCAGGACCATCCTATAGAAGAATACATGGAGCATTCAAAAATGGTAGTGCAACATAGTGGCGGACTTCCATTAGCTCTTCGAGTTTTGGGTTCTACTTTATCAGGGGAAAGTATAGATGTATGGGAAAGTGCACTGGAGAAGTTGAAAGTTATTCCTAATGGTGAAATCTTGAATAAACTAAGAATAAGCTATGACAGCTTACAAGATGACCATGACCAGAAATTATTCCTTCACATTGCTTGCTTCCTAATAGGAAGGGACAAAAACTACATTGTTAGAATACTCAATGGATGTGATTTCTTTACAACCATTGGCATTCATAATCTCATTGATAGATGCTTGGTGACAATTGATAAATACGACAAGGTGAATATGCATGACATGATTCGTGACATGGGGAGAGAAATTGTTCGCCTAGAAGCAGAAGAGCCTGAGAAACGTAGTAGATTATGGCGCCATAAGGATTCTTTCGAAGTATTGAGGGACAAGAATGGTACACAAACAATTCAAGGTCTTGTCTTGGATATGCGTATGCACCTTGCAAATAGTCCGATAAACACAAATGAAACAATCTTAGAAACCAATGCATTTGAAAGGATGCAAAAATTAAAACTACTCCATCTTACTCATGTACAACTCGATGGATGTTATGCAAAATTTCCTTTAGGATTAAGATGGTTGTGTTGGCTTGGATTTCCTTTACATTCTATACCTATTGATTTTCCTTTGGAGAACGTAATTGTTCTTGAAATGCAATACAGTAACTTGGGACAAGTATGCAAAGGAACAAAAGTTCTTCCGCTGTTGAAGATCCTTGACTTCAGCCATTCTCATGACCTCACTGAAATCATGGACTTCTCACTTTGCCCTAGTCTAGAAGAATTGATTCTTGTAGATTGCACAAGCTTGAAGAGTGTTCATGAATCCATTGGAAACCTGGAAAGACTCGTGTACTTGAATATGAAAGACTGCAAGAATCTTAGGATGCTTCCAAAGAACATGTGCATGCTAAAATCACTTGAAACACTCATTTTATCTAGTTGCTCAAGTCTGGATGAGTTCCCAGTGGAGATGATGAAGCAGATAAAGTCTCTGAAAGTTCTTAAAACAGATGGAATTCCATTAAATGAATTATGGCCAGAAAGAAGTTCAAGTATCTTGAGTTCTTTTCCATGCTCTTTAGTAGAGTTAAATCTCAGTAGGTGCAATCTTTCTGATGATGCCTTTCCTTGGGATTTAAGTAATCTATCGTCAATCCGAAGACTATATTTAGATGAGAATCCAATTTGTACTCTACCAATTTTCATCAAAGGTTTGAGGAGGCTCGATCATCTCTCTTTCTATGATTGTGAGAGGCTCAAATCACTTGTGGGTTTACCAAAAGGACACCAATGCTTGTACGTCTCCCAATGCAGATCTTTAGAAAAAGTATCATATCTACAGGATCACTTCTTTAATTGGTCTCCTGAATTCCACTCCATTGGGGGTTCCATCGACAACCTAGTTGAGTGGCAGTATTGGTACAAGTTAGAACCCATCGGAAGAGTTGATGTAGAAATGATTAAACTTTTAGGCTTGTGCAACTTGGAATCCCTGCCAAACATTCGGATGCACAAATTCGGTAGAATGGTTTGGTGTGATGATTGGTCTCCTGTCCAGGTATTCTCACATATATATAGGGGACTGTATCAATATGGTATATTCACCACATTTTTGCCGGGGAATGAATTTTTTCCGAGGAATGAAGTACCAAGCCGGTTGATCCACAAAAGTGGAGGGTCTTCCTCAATATCATTTACCGTGTCGTTACTTCCTAATCACAGAGGTCGAGGCTTGAATGTCTTTGCTGTCTATGAAAATGTTATTGATTTTTCTGATACTGAACTTGTCTACGATTGTATGGATATTCGGATGACTATTAAAGTGAGTAATAAGAGCAAGGGTCTGAAGTGGATCTATGTCCCATTAGTGTACGGTATTCCAGGAGAGGGAGAAGATATGACATGGTTGAGCCATTGGAAAATGGAGAACGAAACAATAGCATTAGAATGTGGAGATGAAGTGTCTGTTTCAGTACTCATGAGACATCCTTGGTTTCAGCTCAAGGAGTTTGGTGTCGAGCTTGTGCAAGAGCACCAAAATAATACGATGATAAGTACCCAACACAACACCAAATCAGATCCTAATTATCCATTTGTCATCAGTGGAGATTTATCGATGTGGGAGCATATACCAGGAATATACTTCCTTGGCGGTTTCTCTAAAGAATATATTAAAAGCATGCCAAGATCTAATTGGATTAATCATCTCATTATGGACTCTGATGAAGAAGACACAGACAAAGAAGAAGGGCAAGAGGATGAACCTGATTACACAATTGCAAAGACGAGGGCTGCCAACAATAACTACGGCCTCGGAGGCTGGAAGGTGCTCCTTATAGTTGTTGGCTTCTTTTTCACGCTTGCTCTAGTACTTTGGTCCTCCATCTCCCAGAAAAAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

894

Amino Acids

103.25

Weight (kDa)

5.93

Isoelectric Point (pI)

41.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000036)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G57630 AT1G72930 AT5G38344
fragaria_vesca FvH4_1g27020 FvH4_2g00931 FvH4_2g17330 FvH4_2g17330 FvH4_2g17340 FvH4_2g17350 FvH4_2g20690 FvH4_5g15301 FvH4_5g34194 FvH4_5g38530 FvH4_5g38740 FvH4_5g38740 FvH4_5g38740 FvH4_6g03800 FvH4_7g09791 FvH4_7g09800 FvH4_7g09800 FvH4_7g10510 FvH4_7g10520 FvH4_7g10520 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750 FvH4_7g10750
malus_domestica MD02G1217100.v1.1 MD02G1217200.v1.1 MD02G1217400.v1.1 MD02G1217600.v1.1 MD02G1264800.v1.1 MD02G1264900.v1.1 MD02G1302100.v1.1 MD04G1010700.v1.1 MD05G1006800.v1.1 MD05G1140100.v1.1 MD05G1140200.v1.1 MD05G1152200.v1.1 MD07G1073500.v1.1 MD07G1101700.v1.1 MD07G1102200.v1.1 MD07G1103200.v1.1 MD07G1112300.v1.1 MD08G1018200.v1.1 MD08G1018400.v1.1 MD08G1018800.v1.1 MD08G1019000.v1.1 MD08G1019100.v1.1 MD08G1019200.v1.1 MD08G1019300.v1.1 MD08G1019400.v1.1 MD08G1019600.v1.1 MD08G1019900.v1.1 MD08G1020000.v1.1 MD08G1020200.v1.1 MD08G1020500.v1.1 MD08G1020700.v1.1 MD08G1020800.v1.1 MD08G1040700.v1.1 MD11G1112400.v1.1 MD12G1068600.v1.1 MD12G1193200.v1.1 MD13G1050600.v1.1 MD15G1374900.v1.1 MD15G1375100.v1.1 MD15G1416500.v1.1 MD17G1072500.v1.1 MD17G1274200.v1.1 MD17G1274900.v1.1
prunus_persica Prupe.2G121000_v2.0.a1 Prupe.2G121000_v2.0.a1 Prupe.2G125800_v2.0.a1 Prupe.2G126000_v2.0.a1 Prupe.2G126100_v2.0.a1 Prupe.2G126200_v2.0.a1 Prupe.2G126300_v2.0.a1 Prupe.2G126400_v2.0.a1 Prupe.2G126500_v2.0.a1 Prupe.2G126600_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126700_v2.0.a1 Prupe.2G126800_v2.0.a1 Prupe.2G126900_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G127000_v2.0.a1 Prupe.2G135500_v2.0.a1 Prupe.2G135600_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.2G135700_v2.0.a1 Prupe.3G009800_v2.0.a1 Prupe.3G010200_v2.0.a1 Prupe.3G131000_v2.0.a1 Prupe.4G260800_v2.0.a1 Prupe.4G260900_v2.0.a1 Prupe.6G083100_v2.0.a1 Prupe.6G083200_v2.0.a1 Prupe.6G083400_v2.0.a1 Prupe.6G132100_v2.0.a1 Prupe.8G184900_v2.0.a1 Prupe.8G185200_v2.0.a1 Prupe.8G185300_v2.0.a1
pyrus_communis pycom02g17870 pycom02g17880 pycom02g19520 pycom02g22610 pycom02g22630 pycom02g22680 pycom05g13540 pycom05g14680 pycom07g04880 pycom07g04890 pycom07g05690 pycom07g05710 pycom07g05720 pycom07g05750 pycom07g05780 pycom07g06300 pycom07g08320 pycom07g08330 pycom07g08350 pycom07g08360 pycom07g08370 pycom07g08410 pycom07g08420 pycom07g08430 pycom07g08440 pycom07g08470 pycom07g08480 pycom07g08520 pycom07g08550 pycom07g08560 pycom07g08640 pycom07g08660 pycom07g08670 pycom07g08680 pycom07g08690 pycom07g08720 pycom07g08730 pycom07g08790 pycom07g08800 pycom07g08810 pycom07g08860 pycom07g08890 pycom07g09720 pycom08g01590 pycom08g01600 pycom08g01620 pycom08g01630 pycom08g01640 pycom10g12630 pycom15g16490 pycom17g07200 pycom17g07210 pycom17g07220 pycom17g11730 pycom17g11740 pycom17g27340 pycom17g27380
rosa_chinensis RchiOBHm_Chr1g0342571 RchiOBHm_Chr1g0346231 RchiOBHm_Chr1g0346831 RchiOBHm_Chr1g0346891 RchiOBHm_Chr1g0348311 RchiOBHm_Chr1g0348321 RchiOBHm_Chr1g0348331 RchiOBHm_Chr1g0348361 RchiOBHm_Chr1g0348371 RchiOBHm_Chr1g0348381 RchiOBHm_Chr1g0348401 RchiOBHm_Chr1g0348411 RchiOBHm_Chr1g0348421 RchiOBHm_Chr1g0348431 RchiOBHm_Chr2g0130881 RchiOBHm_Chr3g0487331 RchiOBHm_Chr5g0060371 RchiOBHm_Chr6g0246491 RchiOBHm_Chr6g0246871 RchiOBHm_Chr6g0250311 RchiOBHm_Chr6g0250781 RchiOBHm_Chr6g0251431 RchiOBHm_Chr6g0281871 RchiOBHm_Chr6g0281881 RchiOBHm_Chr6g0281931 RchiOBHm_Chr6g0281941 RchiOBHm_Chr6g0281951 RchiOBHm_Chr6g0281971 RchiOBHm_Chr6g0281981 RchiOBHm_Chr7g0240541 RchiOBHm_Chr7g0240631 RchiOBHm_Chr7g0240671
rosa_laevigata RLG00000000627 RLG00000000631 RLG00000000641 RLG00000000645 RLG00000000652 RLG00000000662 RLG00000000663 RLG00000000667 RLG00000000670 RLG00000000702 RLG00000001216 RLG00000001219 RLG00000007678 RLG00000012923 RLG00000012996 RLG00000013243 RLG00000017513 RLG00000017514 RLG00000020936 RLG00000022755 RLG00000023013 RLG00000028646 RLG00000028654 RLG00000028662 RLG00000028665 RLG00000028667 RLG00000028711 RLG00000028714 RLG00000028716 RLG00000028770 RLG00000028771 RLG00000028773 RLG00000028778 RLG00000028798 RLG00000028809 RLG00000028813 RLG00000029334 RLG00000030003 RLG00000033910 RLG00000034358 RLG00000035430
rosa_multiflora Rmu_co8031134.1_g000001 Rmu_co8092796.1_g000001 Rmu_co8130156.1_g000001 Rmu_co8325323.1_g000001 Rmu_co8424083.1_g000002 Rmu_sc0000008.1_g000003 Rmu_sc0000008.1_g000011 Rmu_sc0000008.1_g000015 Rmu_sc0000008.1_g000020 Rmu_sc0000091.1_g000015 Rmu_sc0000091.1_g000018 Rmu_sc0000091.1_g000029 Rmu_sc0000091.1_g000031 Rmu_sc0000391.1_g000004 Rmu_sc0001070.1_g000030 Rmu_sc0001293.1_g000016 Rmu_sc0001674.1_g000006 Rmu_sc0001731.1_g000002 Rmu_sc0001731.1_g000003 Rmu_sc0001731.1_g000005 Rmu_sc0001911.1_g000029 Rmu_sc0001913.1_g000038 Rmu_sc0001955.1_g000025 Rmu_sc0001992.1_g000022 Rmu_sc0001992.1_g000028 Rmu_sc0001992.1_g000031 Rmu_sc0002517.1_g000013 Rmu_sc0002517.1_g000017 Rmu_sc0002551.1_g000022 Rmu_sc0002551.1_g000029 Rmu_sc0002551.1_g000038 Rmu_sc0002705.1_g000015 Rmu_sc0002705.1_g000016 Rmu_sc0002882.1_g000055 Rmu_sc0003232.1_g000027 Rmu_sc0003363.1_g000037 Rmu_sc0003600.1_g000054 Rmu_sc0003918.1_g000011 Rmu_sc0004395.1_g000011 Rmu_sc0005071.1_g000004 Rmu_sc0005255.1_g000018 Rmu_sc0005327.1_g000004 Rmu_sc0005597.1_g000007 Rmu_sc0007060.1_g000007 Rmu_sc0007310.1_g000003 Rmu_sc0007383.1_g000014 Rmu_sc0007799.1_g000003 Rmu_sc0008477.1_g000016 Rmu_sc0010151.1_g000009 Rmu_sc0011217.1_g000005 Rmu_sc0016269.1_g000006 Rmu_sc0021495.1_g000001 Rmu_sc0027364.1_g000001 Rmu_sc0029432.1_g000001 Rmu_sc0041386.1_g000001 Rmu_ssc0000126.1_g000023 Rmu_ssc0000126.1_g000027
rosa_roxburghii Rroxscaffold_1G00006130 Rroxscaffold_1G00023320 Rroxscaffold_1G00038770 Rroxscaffold_2G00119800 Rroxscaffold_2G00121860 Rroxscaffold_3G00219780 Rroxscaffold_3G00219890 Rroxscaffold_4G00306740 Rroxscaffold_4G00306820 Rroxscaffold_4G00307000 Rroxscaffold_4G00307010 Rroxscaffold_4G00307020 Rroxscaffold_4G00308030 Rroxscaffold_4G00308070 Rroxscaffold_4G00308450 Rroxscaffold_4G00308460 Rroxscaffold_4G00315320 Rroxscaffold_5G00352470 Rroxscaffold_5G00371420 Rroxscaffold_6G00392300 Rroxscaffold_6G00394870 Rroxscaffold_6G00394890 Rroxscaffold_7G00186700 Rroxscaffold_7G00194980 Rroxscaffold_7G00216840
rosa_rugosa Rorug01G0076100 Rorug01G0128100 Rorug01G0149000.1 Rorug01G0149500.1 Rorug01G0180000 Rorug01G0180100 Rorug01G0182900 Rorug01G0184000 Rorug01G0184100 Rorug01G0184300 Rorug01G0184600 Rorug01G0184700 Rorug01G0184700 Rorug01G0184900 Rorug01G0185000 Rorug01G0185100 Rorug01G0189300 Rorug01G0194100 Rorug01G0194100 Rorug01G0194200 Rorug01G0194400 Rorug01G0194400 Rorug01G0194500 Rorug02G0090400 Rorug02G0090400 Rorug03G0233000 Rorug03G0233100 Rorug05G0178600 Rorug05G0178700 Rorug05G0579200 Rorug06G0144100 Rorug06G0144300 Rorug06G0144300 Rorug06G0179300 Rorug06G0208800 Rorug07G0323500 Rorug07G0337000
rosa_samantha Rh1AG046100 Rh1AG201400 Rh1AG201800 Rh1AG202100 Rh1AG202600 Rh1AG211500 Rh1AG211800 Rh1AG212200 Rh1AG212500 Rh1AG212600 Rh1AG214200 Rh1BG168000 Rh1BG168300 Rh1BG168500 Rh1BG177900 Rh1BG178200 Rh1BG178300 Rh1BG178800 Rh1BG178900 Rh1CG080900 Rh1CG183300 Rh1CG186300 Rh1CG186700 Rh1CG187000 Rh1CG187300 Rh1CG193400 Rh1CG195800 Rh1CG196000 Rh1CG196100 Rh1CG196400 Rh1CG196500 Rh1CG196800 Rh1CG198800 Rh1CG442600 Rh1DG086200 Rh1DG155400 Rh1DG156200 Rh1DG194000 Rh1DG194300 Rh1DG194900 Rh1DG197000 Rh1DG198800 Rh1DG199000 Rh1DG199200 Rh1DG202000 Rh1DG203900 Rh1DG207600 Rh1DG207900 Rh1DG208000 Rh1DG208500 Rh1DG208600 Rh1DG208700 Rh3CG339100 Rh5AG106500 Rh5AG264800 Rh5AG265300 Rh5CG302800 Rh5DG277900 Rh6AG257600 Rh6AG257700 Rh6BG260500 Rh6BG260700 Rh6CG259600 Rh6CG259700 Rh6DG252100 Rh7DG126900
rosa_wichuraiana Rw0G005780 Rw0G007540 Rw0G007550 Rw0G007560 Rw0G009390 Rw1G016900 Rw1G016930 Rw1G016940 Rw1G016970 Rw1G017860 Rw1G017890 Rw1G017900 Rw1G017910 Rw1G017920 Rw1G017960 Rw1G017970 Rw1G017980 Rw1G018150 Rw4G000830 Rw5G009290 Rw5G018950 Rw5G024850 Rw5G024870 Rw5G040460 Rw6G022290 Rw7G041020 Rw7G041200 Rw7G041360 Rw7G041450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 65
AccB1I GGYRCC 1 cut(s) 630
AccI GTMKAC 1 cut(s) 2067
AciI CCGC 3 cut(s) 237, 977, 2430
AclWI GGATC 5 cut(s) 982, 1629, 1933, 2138, 2351
AcoI YGGCCR 2 cut(s) 175, 1313
AcsI RAATTY 5 cut(s) 833, 1293, 1646, 1793, 1904
AcuI CTGAAG 2 cut(s) 982, 2144
AcyI GRCGYC 1 cut(s) 631
AfiI CCNNNNNNNGG 2 cut(s) 1407, 2165
AflIII ACRYGT 1 cut(s) 1176
AjnI CCWGG 6 cut(s) 46, 177, 1113, 1833, 2158, 2410
AleI CACNNNNGTG 1 cut(s) 1947
AloI GAACNNNNNNTCC 2 cut(s) 954, 986
AluBI AGCT 8 cut(s) 154, 162, 251, 366, 375, 1083, 2278, 2299
AluI AGCT 8 cut(s) 154, 162, 251, 366, 375, 1083, 2278, 2299
Alw21I GWGCWC 3 cut(s) 310, 2313, 2610
Alw26I GTCTC 5 cut(s) 1272, 1585, 1644, 1830, 2254
Alw44I GTGCAC 1 cut(s) 306
AlwI GGATC 5 cut(s) 982, 1629, 1933, 2138, 2351
AoxI GGCC 3 cut(s) 175, 1313, 2587
ApaLI GTGCAC 1 cut(s) 306
ApeKI GCWGC 1 cut(s) 2570
ApoI RAATTY 5 cut(s) 833, 1293, 1646, 1793, 1904
AseI ATTAAT 1 cut(s) 2478
Asp700I GAANNNNTTC 4 cut(s) 401, 585, 1062, 1908
AspLEI GCGC 1 cut(s) 633
AspS9I GGNCC 3 cut(s) 4, 181, 2655
AsuC2I CCSGG 1 cut(s) 1896
AsuHPI GGTGA 4 cut(s) 350, 532, 556, 1873
AsuII TTCGAA 1 cut(s) 648
AvaII GGWCC 3 cut(s) 4, 181, 2655
BaeGI GKGCMC 1 cut(s) 310
BalI TGGCCA 2 cut(s) 177, 1315
BanI GGYRCC 1 cut(s) 630
BauI CACGAG 1 cut(s) 1124
BbsI GAAGAC 3 cut(s) 1444, 1950, 2514
Bbv12I GWGCWC 3 cut(s) 310, 2313, 2610
BbvI GCAGC 1 cut(s) 2557
BccI CCATC 8 cut(s) 192, 804, 812, 846, 1283, 1676, 1721, 2669
BceAI ACGGC 1 cut(s) 2602
BciT130I CCWGG 6 cut(s) 48, 179, 1115, 1835, 2160, 2412
BcnI CCSGG 1 cut(s) 1896
BcoDI GTCTC 5 cut(s) 1272, 1585, 1644, 1830, 2254
BfaI CTAG 7 cut(s) 72, 593, 1047, 1052, 1215, 1679, 2645
BfmI CTRYAG 2 cut(s) 189, 1616
BfoI RGCGCY 1 cut(s) 634
BglI GCCNNNNNGGC 1 cut(s) 2595
BglII AGATCT 2 cut(s) 1592, 2465
BisI GCNGC 1 cut(s) 2571
BlsI GCNGC 1 cut(s) 2572
BmcAI AGTACT 2 cut(s) 2253, 2649
Bme1390I CCNGG 7 cut(s) 48, 179, 1115, 1835, 1896, 2160, 2412
Bme18I GGWCC 3 cut(s) 4, 181, 2655
BmgT120I GGNCC 3 cut(s) 4, 181, 2655
BmiI GGNNCC 2 cut(s) 632, 1666
BmrFI CCNGG 7 cut(s) 48, 179, 1115, 1835, 1896, 2160, 2412
BmrI ACTGGG 1 cut(s) 1235
BmsI GCATC 6 cut(s) 4, 503, 765, 1152, 1387, 1776
BmuI ACTGGG 1 cut(s) 1235
BpiI GAAGAC 3 cut(s) 1444, 1950, 2514
BpmI CTGGAG 1 cut(s) 332
Bpu14I TTCGAA 1 cut(s) 648
BpuEI CTTGAG 3 cut(s) 1207, 1357, 2264
BpuMI CCSGG 1 cut(s) 1896
Bsa29I ATCGAT 1 cut(s) 2393
BsaBI GATNNNNATC 2 cut(s) 138, 1455
BsaHI GRCGYC 1 cut(s) 631
BsaI GGTCTC 2 cut(s) 1644, 1830
BsaJI CCNNGG 6 cut(s) 1406, 1895, 1913, 2267, 2425, 2590
BsaXI ACNNNNNCTCC 2 cut(s) 2223, 2253
Bsc4I CCNNNNNNNGG 2 cut(s) 1407, 2165
Bse118I RCCGGY 1 cut(s) 1932
Bse1I ACTGG 2 cut(s) 315, 1241
Bse3DI GCAATG 1 cut(s) 411
Bse8I GATNNNNATC 2 cut(s) 138, 1455
BseBI CCWGG 6 cut(s) 48, 179, 1115, 1835, 2160, 2412
BseCI ATCGAT 1 cut(s) 2393
BseDI CCNNGG 6 cut(s) 1406, 1895, 1913, 2267, 2425, 2590
BseJI GATNNNNATC 2 cut(s) 138, 1455
BseLI CCNNNNNNNGG 2 cut(s) 1407, 2165
BseMI GCAATG 1 cut(s) 411
BseMII CTCAG 2 cut(s) 600, 1387
BseNI ACTGG 2 cut(s) 315, 1241
BseRI GAGGAG 1 cut(s) 1510
BseSI GKGCMC 1 cut(s) 310
BseXI GCAGC 1 cut(s) 2557
BsgI GTGCAG 1 cut(s) 134
BshFI GGCC 3 cut(s) 177, 1315, 2589
BshNI GGYRCC 1 cut(s) 630
BshVI ATCGAT 1 cut(s) 2393
BsiHKAI GWGCWC 3 cut(s) 310, 2313, 2610
BsiSI CCGG 2 cut(s) 1895, 1933
BslFI GGGAC 5 cut(s) 449, 674, 960, 1872, 2123
BslI CCNNNNNNNGG 2 cut(s) 1407, 2165
BsmAI GTCTC 5 cut(s) 1272, 1585, 1644, 1830, 2254
BsmBI CGTCTC 1 cut(s) 1585
BsmFI GGGAC 5 cut(s) 449, 674, 960, 1872, 2123
BsmI GAATGC 2 cut(s) 208, 492
BsnI GGCC 3 cut(s) 177, 1315, 2589
Bso31I GGTCTC 2 cut(s) 1644, 1830
Bsp119I TTCGAA 1 cut(s) 648
Bsp1286I GDGCHC 3 cut(s) 310, 2313, 2610
Bsp1407I TGTACA 1 cut(s) 808
Bsp143I GATC 9 cut(s) 34, 987, 1504, 1592, 1621, 1938, 2130, 2356, 2465
BspACI CCGC 3 cut(s) 237, 977, 2430
BspANI GGCC 3 cut(s) 177, 1315, 2589
BspCNI CTCAG 2 cut(s) 601, 1386
BspDI ATCGAT 1 cut(s) 2393
BspHI TCATGA 3 cut(s) 1009, 1096, 2256
BspLI GGNNCC 2 cut(s) 632, 1666
BspPI GGATC 5 cut(s) 982, 1629, 1933, 2138, 2351
BspQI GCTCTTC 2 cut(s) 258, 597
BspT104I TTCGAA 1 cut(s) 648
BspT107I GGYRCC 1 cut(s) 630
BspTNI GGTCTC 2 cut(s) 1644, 1830
BsrDI GCAATG 1 cut(s) 411
BsrFI RCCGGY 1 cut(s) 1932
BsrGI TGTACA 1 cut(s) 808
BsrI ACTGG 2 cut(s) 315, 1241
BssAI RCCGGY 1 cut(s) 1932
BssECI CCNNGG 6 cut(s) 1406, 1895, 1913, 2267, 2425, 2590
BssMI GATC 9 cut(s) 34, 987, 1504, 1592, 1621, 1938, 2130, 2356, 2465
BssNI GRCGYC 1 cut(s) 631
BssSI CACGAG 1 cut(s) 1124
BssT1I CCWWGG 3 cut(s) 1406, 2267, 2425
Bst2BI CACGAG 1 cut(s) 1124
Bst2UI CCWGG 6 cut(s) 48, 179, 1115, 1835, 2160, 2412
Bst4CI ACNGT 4 cut(s) 938, 1863, 1978, 2153
Bst6I CTCTTC 4 cut(s) 258, 597, 1082, 1714
BstACI GRCGYC 1 cut(s) 631
BstAUI TGTACA 1 cut(s) 808
BstBI TTCGAA 1 cut(s) 648
BstC8I GCNNGC 6 cut(s) 164, 168, 418, 1184, 2459, 2640
BstDEI CTNAG 5 cut(s) 356, 609, 751, 1157, 1373
BstH2I RGCGCY 1 cut(s) 634
BstHHI GCGC 1 cut(s) 633
BstKTI GATC 9 cut(s) 37, 990, 1507, 1595, 1624, 1941, 2133, 2359, 2468
BstMAI GTCTC 5 cut(s) 1272, 1585, 1644, 1830, 2254
BstMBI GATC 9 cut(s) 34, 987, 1504, 1592, 1621, 1938, 2130, 2356, 2465
BstMWI GCNNNNNNNGC 2 cut(s) 372, 2595
BstNI CCWGG 6 cut(s) 48, 179, 1115, 1835, 2160, 2412
BstNSI RCATGY 4 cut(s) 170, 1180, 1186, 2461
BstSCI CCNGG 7 cut(s) 46, 177, 1113, 1833, 1894, 2158, 2410
BstSFI CTRYAG 2 cut(s) 189, 1616
BstSLI GKGCMC 1 cut(s) 310
BstV1I GCAGC 1 cut(s) 2557
BstV2I GAAGAC 3 cut(s) 1444, 1950, 2514
BstX2I RGATCY 5 cut(s) 987, 1592, 2130, 2356, 2465
BstXI CCANNNNNNTGG 2 cut(s) 1658, 1949
BstYI RGATCY 5 cut(s) 987, 1592, 2130, 2356, 2465
Bsu15I ATCGAT 1 cut(s) 2393
BsuRI GGCC 3 cut(s) 177, 1315, 2589
BsuTUI ATCGAT 1 cut(s) 2393
BtsIMutI CAGTG 4 cut(s) 308, 1017, 1248, 2386
Cac8I GCNNGC 6 cut(s) 164, 168, 418, 1184, 2459, 2640
CciI TCATGA 3 cut(s) 1009, 1096, 2256
CfoI GCGC 1 cut(s) 633
Cfr10I RCCGGY 1 cut(s) 1932
Cfr13I GGNCC 3 cut(s) 4, 181, 2655
ClaI ATCGAT 1 cut(s) 2393
DdeI CTNAG 5 cut(s) 356, 609, 751, 1157, 1373
DinI GGCGCC 1 cut(s) 632
DpnI GATC 9 cut(s) 36, 989, 1506, 1594, 1623, 1940, 2132, 2358, 2467
DpnII GATC 9 cut(s) 34, 987, 1504, 1592, 1621, 1938, 2130, 2356, 2465
EaeI YGGCCR 2 cut(s) 175, 1313
Eam1104I CTCTTC 4 cut(s) 258, 597, 1082, 1714
EarI CTCTTC 4 cut(s) 258, 597, 1082, 1714
EciI GGCGGA 1 cut(s) 252
Eco130I CCWWGG 3 cut(s) 1406, 2267, 2425
Eco31I GGTCTC 2 cut(s) 1644, 1830
Eco47I GGWCC 3 cut(s) 4, 181, 2655
Eco57I CTGAAG 2 cut(s) 982, 2144
EcoRI GAATTC 2 cut(s) 1293, 1646
EcoRII CCWGG 6 cut(s) 46, 177, 1113, 1833, 2158, 2410
EcoT14I CCWWGG 3 cut(s) 1406, 2267, 2425
EcoT22I ATGCAT 3 cut(s) 172, 555, 766
EgeI GGCGCC 1 cut(s) 632
EheI GGCGCC 1 cut(s) 632
ErhI CCWWGG 3 cut(s) 1406, 2267, 2425
Esp3I CGTCTC 1 cut(s) 1585
FaqI GGGAC 5 cut(s) 449, 674, 960, 1872, 2123
FblI GTMKAC 1 cut(s) 2067
Fnu4HI GCNGC 1 cut(s) 2571
Fsp4HI GCNGC 1 cut(s) 2571
FspBI CTAG 7 cut(s) 72, 593, 1047, 1052, 1215, 1679, 2645
GlaI GCGC 1 cut(s) 632
GluI GCNGC 1 cut(s) 2571
GsuI CTGGAG 1 cut(s) 332
HaeII RGCGCY 1 cut(s) 634
HaeIII GGCC 3 cut(s) 177, 1315, 2589
HapII CCGG 2 cut(s) 1895, 1933
HhaI GCGC 1 cut(s) 633
Hin1I GRCGYC 1 cut(s) 631
Hin6I GCGC 1 cut(s) 631
HinP1I GCGC 1 cut(s) 631
HindIII AAGCTT 1 cut(s) 1081
HinfI GANTC 9 cut(s) 562, 641, 1063, 1100, 1122, 1153, 1456, 1766, 2495
HpaII CCGG 2 cut(s) 1895, 1933
HphI GGTGA 4 cut(s) 350, 532, 556, 1873
Hpy166II GTNNAC 6 cut(s) 308, 674, 1129, 1553, 2068, 2149
Hpy8I GTNNAC 6 cut(s) 308, 674, 1129, 1553, 2068, 2149
HpyAV CCTTC 4 cut(s) 416, 426, 2519, 2596
HpyCH4III ACNGT 4 cut(s) 938, 1863, 1978, 2153
HpyCH4IV ACGT 3 cut(s) 616, 912, 1578
HpyF10VI GCNNNNNNNGC 2 cut(s) 372, 2595
HpyF3I CTNAG 5 cut(s) 356, 609, 751, 1157, 1373
HpySE526I ACGT 3 cut(s) 616, 912, 1578
Hsp92I GRCGYC 1 cut(s) 631
HspAI GCGC 1 cut(s) 631
KasI GGCGCC 1 cut(s) 630
Kzo9I GATC 9 cut(s) 34, 987, 1504, 1592, 1621, 1938, 2130, 2356, 2465
LguI GCTCTTC 2 cut(s) 258, 597
LmnI GCTCC 3 cut(s) 205, 2401, 2613
Lsp1109I GCAGC 1 cut(s) 2557
LweI GCATC 6 cut(s) 4, 503, 765, 1152, 1387, 1776
MaeI CTAG 7 cut(s) 72, 593, 1047, 1052, 1215, 1679, 2645
MaeII ACGT 3 cut(s) 616, 912, 1578
MaeIII GTNAC 5 cut(s) 103, 520, 566, 938, 1983
MalI GATC 9 cut(s) 36, 989, 1506, 1594, 1623, 1940, 2132, 2358, 2467
MboI GATC 9 cut(s) 34, 987, 1504, 1592, 1621, 1938, 2130, 2356, 2465
MfeI CAATTG 2 cut(s) 525, 2553
MflI RGATCY 5 cut(s) 987, 1592, 2130, 2356, 2465
MhlI GDGCHC 3 cut(s) 310, 2313, 2610
MlsI TGGCCA 2 cut(s) 177, 1315
MluNI TGGCCA 2 cut(s) 177, 1315
Mly113I GGCGCC 1 cut(s) 631
MlyI GAGTC 2 cut(s) 1116, 2489
Mox20I TGGCCA 2 cut(s) 177, 1315
Mph1103I ATGCAT 3 cut(s) 172, 555, 766
MroXI GAANNNNTTC 4 cut(s) 401, 585, 1062, 1908
MscI TGGCCA 2 cut(s) 177, 1315
MslI CAYNNNNRTG 5 cut(s) 1008, 1181, 1784, 1947, 2224
Msp20I TGGCCA 2 cut(s) 177, 1315
MspA1I CMGCKG 2 cut(s) 162, 979
MspI CCGG 2 cut(s) 1895, 1933
MspR9I CCNGG 7 cut(s) 48, 179, 1115, 1835, 1896, 2160, 2412
MunI CAATTG 2 cut(s) 525, 2553
Mva1269I GAATGC 2 cut(s) 208, 492
MvaI CCWGG 6 cut(s) 48, 179, 1115, 1835, 2160, 2412
MwoI GCNNNNNNNGC 2 cut(s) 372, 2595
NarI GGCGCC 1 cut(s) 631
NciI CCSGG 1 cut(s) 1896
NdeII GATC 9 cut(s) 34, 987, 1504, 1592, 1621, 1938, 2130, 2356, 2465
NlaIV GGNNCC 2 cut(s) 632, 1666
NmuCI GTSAC 2 cut(s) 520, 566
NsiI ATGCAT 3 cut(s) 172, 555, 766
NspI RCATGY 4 cut(s) 170, 1180, 1186, 2461
NspV TTCGAA 1 cut(s) 648
OliI CACNNNNGTG 1 cut(s) 1947
PaeI GCATGC 3 cut(s) 170, 1186, 2461
PagI TCATGA 3 cut(s) 1009, 1096, 2256
PciI ACATGT 1 cut(s) 1176
PciSI GCTCTTC 2 cut(s) 258, 597
PctI GAATGC 2 cut(s) 208, 492
PdmI GAANNNNTTC 4 cut(s) 401, 585, 1062, 1908
PfeI GAWTC 7 cut(s) 562, 641, 1063, 1100, 1153, 1456, 1766
PfoI TCCNGGA 2 cut(s) 46, 2158
PkrI GCNGC 1 cut(s) 2572
PleI GAGTC 2 cut(s) 1116, 2489
PluTI GGCGCC 1 cut(s) 634
PpsI GAGTC 2 cut(s) 1116, 2489
PscI ACATGT 1 cut(s) 1176
PshBI ATTAAT 1 cut(s) 2478
PsiI TTATAA 1 cut(s) 65
Psp6I CCWGG 6 cut(s) 46, 177, 1113, 1833, 2158, 2410
PspGI CCWGG 6 cut(s) 46, 177, 1113, 1833, 2158, 2410
PspN4I GGNNCC 2 cut(s) 632, 1666
PspPI GGNCC 3 cut(s) 4, 181, 2655
PsrI GAACNNNNNNTAC 2 cut(s) 1324, 1356
PsuI RGATCY 5 cut(s) 987, 1592, 2130, 2356, 2465
PvuII CAGCTG 1 cut(s) 162
RseI CAYNNNNRTG 5 cut(s) 1008, 1181, 1784, 1947, 2224
SapI GCTCTTC 2 cut(s) 258, 597
SatI GCNGC 1 cut(s) 2571
Sau3AI GATC 9 cut(s) 34, 987, 1504, 1592, 1621, 1938, 2130, 2356, 2465
Sau96I GGNCC 3 cut(s) 4, 181, 2655
ScaI AGTACT 2 cut(s) 2253, 2649
SchI GAGTC 2 cut(s) 1116, 2489
ScrFI CCNGG 7 cut(s) 48, 179, 1115, 1835, 1896, 2160, 2412
SduI GDGCHC 3 cut(s) 310, 2313, 2610
SfaNI GCATC 6 cut(s) 4, 503, 765, 1152, 1387, 1776
SfcI CTRYAG 2 cut(s) 189, 1616
SfoI GGCGCC 1 cut(s) 632
SfuI TTCGAA 1 cut(s) 648
SinI GGWCC 3 cut(s) 4, 181, 2655
SmiMI CAYNNNNRTG 5 cut(s) 1008, 1181, 1784, 1947, 2224
SmlI CTYRAG 3 cut(s) 1222, 1336, 2279
SmoI CTYRAG 3 cut(s) 1222, 1336, 2279
SphI GCATGC 3 cut(s) 170, 1186, 2461
SsiI CCGC 3 cut(s) 237, 977, 2430
SspDI GGCGCC 1 cut(s) 630
SspMI CTAG 7 cut(s) 72, 593, 1047, 1052, 1215, 1679, 2645
StyD4I CCNGG 7 cut(s) 46, 177, 1113, 1833, 1894, 2158, 2410
StyI CCWWGG 3 cut(s) 1406, 2267, 2425
TaaI ACNGT 4 cut(s) 938, 1863, 1978, 2153
TaiI ACGT 3 cut(s) 619, 915, 1581
TaqI TCGA 8 cut(s) 256, 648, 816, 1503, 1671, 2005, 2295, 2393
TatI WGTACW 5 cut(s) 808, 1128, 1466, 2251, 2647
TfiI GAWTC 7 cut(s) 562, 641, 1063, 1100, 1153, 1456, 1766
TscAI CASTG 4 cut(s) 315, 1024, 1248, 2386
TseFI GTSAC 2 cut(s) 520, 566
TseI GCWGC 1 cut(s) 2570
Tsp45I GTSAC 2 cut(s) 520, 566
TspRI CASTG 4 cut(s) 315, 1024, 1248, 2386
VneI GTGCAC 1 cut(s) 306
VpaK11BI GGWCC 3 cut(s) 4, 181, 2655
VspI ATTAAT 1 cut(s) 2478
XapI RAATTY 5 cut(s) 833, 1293, 1646, 1793, 1904
XbaI TCTAGA 1 cut(s) 1051
XceI RCATGY 4 cut(s) 170, 1180, 1186, 2461
XcmI CCANNNNNNNNNTGG 2 cut(s) 1111, 2469
XmiI GTMKAC 1 cut(s) 2067
XmnI GAANNNNTTC 4 cut(s) 401, 585, 1062, 1908
XspI CTAG 7 cut(s) 72, 593, 1047, 1052, 1215, 1679, 2645
ZrmI AGTACT 2 cut(s) 2253, 2649
Zsp2I ATGCAT 3 cut(s) 172, 555, 766
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.