TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 394 |
| AccB1I | GGYRCC | 1 cut(s) | 1017 |
| AccBSI | CCGCTC | 1 cut(s) | 560 |
| AciI | CCGC | 7 cut(s) | 109, 438, 528, 560, 756, 797, 1395 |
| AclWI | GGATC | 2 cut(s) | 1639, 1652 |
| AcoI | YGGCCR | 2 cut(s) | 3, 106 |
| AcsI | RAATTY | 3 cut(s) | 472, 479, 1499 |
| AcuI | CTGAAG | 1 cut(s) | 598 |
| AcyI | GRCGYC | 1 cut(s) | 1018 |
| AfaI | GTAC | 9 cut(s) | 76, 234, 410, 819, 1027, 1087, 1272, 1484, 1748 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 99, 1216, 1272 |
| AflIII | ACRYGT | 1 cut(s) | 294 |
| AjiI | CACGTC | 1 cut(s) | 858 |
| AjnI | CCWGG | 2 cut(s) | 1648, 1719 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 121, 153, 158, 190 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 118, 150 |
| AluBI | AGCT | 8 cut(s) | 548, 618, 1294, 1466, 1495, 1536, 1700, 1808 |
| AluI | AGCT | 8 cut(s) | 548, 618, 1294, 1466, 1495, 1536, 1700, 1808 |
| Alw21I | GWGCWC | 2 cut(s) | 1458, 1549 |
| Alw26I | GTCTC | 1 cut(s) | 456 |
| Alw44I | GTGCAC | 1 cut(s) | 1545 |
| AlwI | GGATC | 2 cut(s) | 1639, 1652 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 725 |
| Ama87I | CYCGRG | 1 cut(s) | 936 |
| AoxI | GGCC | 3 cut(s) | 3, 106, 1119 |
| ApaLI | GTGCAC | 1 cut(s) | 1545 |
| ApeKI | GCWGC | 5 cut(s) | 146, 257, 827, 962, 1697 |
| ApoI | RAATTY | 3 cut(s) | 472, 479, 1499 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 133 |
| AspLEI | GCGC | 2 cut(s) | 1020, 1394 |
| AspS9I | GGNCC | 2 cut(s) | 279, 562 |
| AsuHPI | GGTGA | 3 cut(s) | 452, 859, 1279 |
| AsuII | TTCGAA | 1 cut(s) | 470 |
| AvaI | CYCGRG | 1 cut(s) | 936 |
| AvaII | GGWCC | 2 cut(s) | 279, 562 |
| AxyI | CCTNAGG | 1 cut(s) | 786 |
| BaeGI | GKGCMC | 1 cut(s) | 1549 |
| BamHI | GGATCC | 1 cut(s) | 1644 |
| BanI | GGYRCC | 1 cut(s) | 1017 |
| Bbv12I | GWGCWC | 2 cut(s) | 1458, 1549 |
| BbvCI | CCTCAGC | 2 cut(s) | 252, 1211 |
| BbvI | GCAGC | 5 cut(s) | 133, 244, 814, 974, 1709 |
| BccI | CCATC | 6 cut(s) | 80, 857, 1169, 1334, 1517, 1635 |
| BceAI | ACGGC | 1 cut(s) | 77 |
| BciT130I | CCWGG | 2 cut(s) | 1650, 1721 |
| BcoDI | GTCTC | 1 cut(s) | 456 |
| BfaI | CTAG | 3 cut(s) | 518, 804, 1620 |
| BfmI | CTRYAG | 2 cut(s) | 699, 717 |
| BfoI | RGCGCY | 1 cut(s) | 1021 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1331 |
| BisI | GCNGC | 8 cut(s) | 109, 147, 258, 529, 828, 963, 1395, 1698 |
| BlsI | GCNGC | 8 cut(s) | 110, 148, 259, 530, 829, 964, 1396, 1699 |
| Bme1390I | CCNGG | 2 cut(s) | 1650, 1721 |
| Bme18I | GGWCC | 2 cut(s) | 279, 562 |
| BmeT110I | CYCGRG | 1 cut(s) | 936 |
| BmgBI | CACGTC | 1 cut(s) | 858 |
| BmgT120I | GGNCC | 2 cut(s) | 279, 562 |
| BmiI | GGNNCC | 4 cut(s) | 91, 646, 1019, 1646 |
| BmrFI | CCNGG | 2 cut(s) | 1650, 1721 |
| BmrI | ACTGGG | 2 cut(s) | 245, 343 |
| BmsI | GCATC | 1 cut(s) | 722 |
| BmuI | ACTGGG | 2 cut(s) | 245, 343 |
| Bpu10I | CCTNAGC | 2 cut(s) | 252, 1211 |
| Bpu14I | TTCGAA | 1 cut(s) | 470 |
| BpuEI | CTTGAG | 1 cut(s) | 407 |
| BsaAI | YACGTR | 2 cut(s) | 817, 1486 |
| BsaHI | GRCGYC | 1 cut(s) | 1018 |
| BsaI | GGTCTC | 1 cut(s) | 456 |
| BsaJI | CCNNGG | 5 cut(s) | 121, 764, 937, 1013, 1648 |
| BsaWI | WCCGGW | 1 cut(s) | 281 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 118, 148, 189, 219 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 99, 1216, 1272 |
| Bse118I | RCCGGY | 2 cut(s) | 5, 1239 |
| Bse1I | ACTGG | 6 cut(s) | 136, 240, 338, 565, 825, 1599 |
| Bse21I | CCTNAGG | 1 cut(s) | 786 |
| Bse3DI | GCAATG | 3 cut(s) | 492, 510, 1320 |
| BseBI | CCWGG | 2 cut(s) | 1650, 1721 |
| BseDI | CCNNGG | 5 cut(s) | 121, 764, 937, 1013, 1648 |
| BseGI | GGATG | 4 cut(s) | 91, 1206, 1633, 1646 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 99, 1216, 1272 |
| BseMI | GCAATG | 3 cut(s) | 492, 510, 1320 |
| BseMII | CTCAG | 5 cut(s) | 243, 800, 1113, 1225, 1356 |
| BseNI | ACTGG | 6 cut(s) | 136, 240, 338, 565, 825, 1599 |
| BseRI | GAGGAG | 1 cut(s) | 1791 |
| BseSI | GKGCMC | 1 cut(s) | 1549 |
| BseXI | GCAGC | 5 cut(s) | 133, 244, 814, 974, 1709 |
| BseYI | CCCAGC | 1 cut(s) | 1183 |
| BshFI | GGCC | 3 cut(s) | 5, 108, 1121 |
| BshNI | GGYRCC | 1 cut(s) | 1017 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1458, 1549 |
| BsiHKCI | CYCGRG | 1 cut(s) | 936 |
| BsiSI | CCGG | 3 cut(s) | 6, 282, 1240 |
| BsiWI | CGTACG | 1 cut(s) | 1270 |
| BslFI | GGGAC | 1 cut(s) | 252 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 99, 1216, 1272 |
| BsmAI | GTCTC | 1 cut(s) | 456 |
| BsmFI | GGGAC | 1 cut(s) | 252 |
| BsmI | GAATGC | 1 cut(s) | 188 |
| BsnI | GGCC | 3 cut(s) | 5, 108, 1121 |
| Bso31I | GGTCTC | 1 cut(s) | 456 |
| BsoBI | CYCGRG | 1 cut(s) | 936 |
| Bsp119I | TTCGAA | 1 cut(s) | 470 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1458, 1549 |
| Bsp1407I | TGTACA | 2 cut(s) | 1025, 1085 |
| Bsp143I | GATC | 4 cut(s) | 852, 1338, 1644, 1714 |
| Bsp19I | CCATGG | 1 cut(s) | 1013 |
| BspACI | CCGC | 7 cut(s) | 109, 438, 528, 560, 756, 797, 1395 |
| BspANI | GGCC | 3 cut(s) | 5, 108, 1121 |
| BspCNI | CTCAG | 5 cut(s) | 244, 799, 1112, 1224, 1355 |
| BspLI | GGNNCC | 4 cut(s) | 91, 646, 1019, 1646 |
| BspPI | GGATC | 2 cut(s) | 1639, 1652 |
| BspT104I | TTCGAA | 1 cut(s) | 470 |
| BspT107I | GGYRCC | 1 cut(s) | 1017 |
| BspTNI | GGTCTC | 1 cut(s) | 456 |
| BsrBI | CCGCTC | 1 cut(s) | 560 |
| BsrDI | GCAATG | 3 cut(s) | 492, 510, 1320 |
| BsrFI | RCCGGY | 2 cut(s) | 5, 1239 |
| BsrGI | TGTACA | 2 cut(s) | 1025, 1085 |
| BsrI | ACTGG | 6 cut(s) | 136, 240, 338, 565, 825, 1599 |
| BssAI | RCCGGY | 2 cut(s) | 5, 1239 |
| BssECI | CCNNGG | 5 cut(s) | 121, 764, 937, 1013, 1648 |
| BssMI | GATC | 4 cut(s) | 852, 1338, 1644, 1714 |
| BssNI | GRCGYC | 1 cut(s) | 1018 |
| BssT1I | CCWWGG | 2 cut(s) | 764, 1013 |
| Bst2UI | CCWGG | 2 cut(s) | 1650, 1721 |
| Bst4CI | ACNGT | 4 cut(s) | 289, 700, 1030, 1511 |
| Bst6I | CTCTTC | 2 cut(s) | 309, 656 |
| BstACI | GRCGYC | 1 cut(s) | 1018 |
| BstAUI | TGTACA | 2 cut(s) | 1025, 1085 |
| BstBAI | YACGTR | 2 cut(s) | 817, 1486 |
| BstBI | TTCGAA | 1 cut(s) | 470 |
| BstC8I | GCNNGC | 5 cut(s) | 7, 730, 1189, 1267, 1806 |
| BstDEI | CTNAG | 8 cut(s) | 10, 252, 320, 786, 1099, 1211, 1342, 1693 |
| BstDSI | CCRYGG | 1 cut(s) | 1013 |
| BstF5I | GGATG | 4 cut(s) | 91, 1206, 1633, 1646 |
| BstH2I | RGCGCY | 1 cut(s) | 1021 |
| BstHHI | GCGC | 2 cut(s) | 1020, 1394 |
| BstKTI | GATC | 4 cut(s) | 855, 1341, 1647, 1717 |
| BstMAI | GTCTC | 1 cut(s) | 456 |
| BstMBI | GATC | 4 cut(s) | 852, 1338, 1644, 1714 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 185, 257, 729, 734, 781, 1331 |
| BstNI | CCWGG | 2 cut(s) | 1650, 1721 |
| BstNSI | RCATGY | 2 cut(s) | 298, 1195 |
| BstSCI | CCNGG | 2 cut(s) | 1648, 1719 |
| BstSFI | CTRYAG | 2 cut(s) | 699, 717 |
| BstSLI | GKGCMC | 1 cut(s) | 1549 |
| BstV1I | GCAGC | 5 cut(s) | 133, 244, 814, 974, 1709 |
| BstX2I | RGATCY | 1 cut(s) | 1644 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1014 |
| BstYI | RGATCY | 1 cut(s) | 1644 |
| Bsu36I | CCTNAGG | 1 cut(s) | 786 |
| BsuRI | GGCC | 3 cut(s) | 5, 108, 1121 |
| BtgI | CCRYGG | 1 cut(s) | 1013 |
| BtrI | CACGTC | 1 cut(s) | 858 |
| BtsCI | GGATG | 4 cut(s) | 91, 1206, 1633, 1646 |
| BtsIMutI | CAGTG | 1 cut(s) | 1035 |
| Cac8I | GCNNGC | 5 cut(s) | 7, 730, 1189, 1267, 1806 |
| CaiI | CAGNNNCTG | 1 cut(s) | 725 |
| CfoI | GCGC | 2 cut(s) | 1020, 1394 |
| Cfr10I | RCCGGY | 2 cut(s) | 5, 1239 |
| Cfr13I | GGNCC | 2 cut(s) | 279, 562 |
| Csp6I | GTAC | 9 cut(s) | 75, 233, 409, 818, 1026, 1086, 1271, 1483, 1747 |
| CviAII | CATG | 9 cut(s) | 295, 456, 733, 890, 1014, 1192, 1330, 1480, 1555 |
| CviQI | GTAC | 9 cut(s) | 75, 233, 409, 818, 1026, 1086, 1271, 1483, 1747 |
| DdeI | CTNAG | 8 cut(s) | 10, 252, 320, 786, 1099, 1211, 1342, 1693 |
| DinI | GGCGCC | 1 cut(s) | 1019 |
| DpnI | GATC | 4 cut(s) | 854, 1340, 1646, 1716 |
| DpnII | GATC | 4 cut(s) | 852, 1338, 1644, 1714 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 394 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 394 |
| EaeI | YGGCCR | 2 cut(s) | 3, 106 |
| Eam1104I | CTCTTC | 2 cut(s) | 309, 656 |
| EarI | CTCTTC | 2 cut(s) | 309, 656 |
| Eco130I | CCWWGG | 2 cut(s) | 764, 1013 |
| Eco31I | GGTCTC | 1 cut(s) | 456 |
| Eco47I | GGWCC | 2 cut(s) | 279, 562 |
| Eco57I | CTGAAG | 1 cut(s) | 598 |
| Eco81I | CCTNAGG | 1 cut(s) | 786 |
| Eco88I | CYCGRG | 1 cut(s) | 936 |
| EcoRI | GAATTC | 2 cut(s) | 479, 1499 |
| EcoRII | CCWGG | 2 cut(s) | 1648, 1719 |
| EcoT14I | CCWWGG | 2 cut(s) | 764, 1013 |
| EgeI | GGCGCC | 1 cut(s) | 1019 |
| EheI | GGCGCC | 1 cut(s) | 1019 |
| ErhI | CCWWGG | 2 cut(s) | 764, 1013 |
| FaeI | CATG | 9 cut(s) | 298, 459, 736, 893, 1017, 1195, 1333, 1483, 1558 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1797 |
| FaqI | GGGAC | 1 cut(s) | 252 |
| FatI | CATG | 9 cut(s) | 294, 455, 732, 889, 1013, 1191, 1329, 1479, 1554 |
| Fnu4HI | GCNGC | 8 cut(s) | 109, 147, 258, 529, 828, 963, 1395, 1698 |
| FokI | GGATG | 4 cut(s) | 98, 1193, 1640, 1653 |
| Fsp4HI | GCNGC | 8 cut(s) | 109, 147, 258, 529, 828, 963, 1395, 1698 |
| FspBI | CTAG | 3 cut(s) | 518, 804, 1620 |
| GlaI | GCGC | 2 cut(s) | 1019, 1393 |
| GluI | GCNGC | 8 cut(s) | 109, 147, 258, 529, 828, 963, 1395, 1698 |
| GsaI | CCCAGC | 1 cut(s) | 1187 |
| HaeII | RGCGCY | 1 cut(s) | 1021 |
| HaeIII | GGCC | 3 cut(s) | 5, 108, 1121 |
| HapII | CCGG | 3 cut(s) | 6, 282, 1240 |
| HhaI | GCGC | 2 cut(s) | 1020, 1394 |
| Hin1I | GRCGYC | 1 cut(s) | 1018 |
| Hin1II | CATG | 9 cut(s) | 298, 459, 736, 893, 1017, 1195, 1333, 1483, 1558 |
| Hin6I | GCGC | 2 cut(s) | 1018, 1392 |
| HinP1I | GCGC | 2 cut(s) | 1018, 1392 |
| HincII | GTYRAC | 1 cut(s) | 1197 |
| HindII | GTYRAC | 1 cut(s) | 1197 |
| HinfI | GANTC | 6 cut(s) | 166, 326, 637, 942, 1284, 1818 |
| HpaII | CCGG | 3 cut(s) | 6, 282, 1240 |
| HphI | GGTGA | 3 cut(s) | 452, 859, 1279 |
| Hpy166II | GTNNAC | 5 cut(s) | 208, 292, 1197, 1547, 1592 |
| Hpy188I | TCNGA | 6 cut(s) | 122, 862, 915, 1463, 1471, 1823 |
| Hpy188III | TCNNGA | 3 cut(s) | 223, 1250, 1673 |
| Hpy8I | GTNNAC | 5 cut(s) | 208, 292, 1197, 1547, 1592 |
| Hpy99I | CGWCG | 1 cut(s) | 1463 |
| HpyAV | CCTTC | 3 cut(s) | 584, 619, 838 |
| HpyCH4III | ACNGT | 4 cut(s) | 289, 700, 1030, 1511 |
| HpyCH4IV | ACGT | 4 cut(s) | 407, 816, 857, 1485 |
| HpyCH4V | TGCA | 8 cut(s) | 116, 149, 260, 515, 830, 1379, 1547, 1554 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 185, 257, 729, 734, 781, 1331 |
| HpyF3I | CTNAG | 8 cut(s) | 10, 252, 320, 786, 1099, 1211, 1342, 1693 |
| HpySE526I | ACGT | 4 cut(s) | 407, 816, 857, 1485 |
| Hsp92I | GRCGYC | 1 cut(s) | 1018 |
| Hsp92II | CATG | 9 cut(s) | 298, 459, 736, 893, 1017, 1195, 1333, 1483, 1558 |
| HspAI | GCGC | 2 cut(s) | 1018, 1392 |
| KasI | GGCGCC | 1 cut(s) | 1017 |
| KroI | GCCGGC | 1 cut(s) | 5 |
| KroNI | GCCGGC | 1 cut(s) | 7 |
| Kzo9I | GATC | 4 cut(s) | 852, 1338, 1644, 1714 |
| LmnI | GCTCC | 3 cut(s) | 89, 557, 1463 |
| Lsp1109I | GCAGC | 5 cut(s) | 133, 244, 814, 974, 1709 |
| LweI | GCATC | 1 cut(s) | 722 |
| MaeI | CTAG | 3 cut(s) | 518, 804, 1620 |
| MaeII | ACGT | 4 cut(s) | 407, 816, 857, 1485 |
| MaeIII | GTNAC | 6 cut(s) | 396, 593, 812, 970, 1030, 1597 |
| MalI | GATC | 4 cut(s) | 854, 1340, 1646, 1716 |
| MbiI | CCGCTC | 1 cut(s) | 560 |
| MboI | GATC | 4 cut(s) | 852, 1338, 1644, 1714 |
| MboII | GAAGA | 9 cut(s) | 53, 56, 296, 604, 643, 862, 1055, 1222, 1495 |
| MflI | RGATCY | 1 cut(s) | 1644 |
| MhlI | GDGCHC | 2 cut(s) | 1458, 1549 |
| MluCI | AATT | 7 cut(s) | 150, 472, 479, 603, 1074, 1387, 1499 |
| Mly113I | GGCGCC | 1 cut(s) | 1018 |
| MlyI | GAGTC | 1 cut(s) | 1278 |
| MmeI | TCCRAC | 1 cut(s) | 1441 |
| MroNI | GCCGGC | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 1 cut(s) | 133 |
| MseI | TTAA | 5 cut(s) | 780, 1050, 1370, 1529, 1659 |
| MslI | CAYNNNNRTG | 5 cut(s) | 161, 879, 1115, 1334, 1484 |
| MspI | CCGG | 3 cut(s) | 6, 282, 1240 |
| MspR9I | CCNGG | 2 cut(s) | 1650, 1721 |
| Mva1269I | GAATGC | 1 cut(s) | 188 |
| MvaI | CCWGG | 2 cut(s) | 1650, 1721 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 185, 257, 729, 734, 781, 1331 |
| NaeI | GCCGGC | 1 cut(s) | 7 |
| NarI | GGCGCC | 1 cut(s) | 1018 |
| NcoI | CCATGG | 1 cut(s) | 1013 |
| NdeII | GATC | 4 cut(s) | 852, 1338, 1644, 1714 |
| NgoMIV | GCCGGC | 1 cut(s) | 5 |
| NlaIII | CATG | 9 cut(s) | 298, 459, 736, 893, 1017, 1195, 1333, 1483, 1558 |
| NlaIV | GGNNCC | 4 cut(s) | 91, 646, 1019, 1646 |
| NmuCI | GTSAC | 5 cut(s) | 396, 593, 812, 970, 1030 |
| NspI | RCATGY | 2 cut(s) | 298, 1195 |
| NspV | TTCGAA | 1 cut(s) | 470 |
| PciI | ACATGT | 1 cut(s) | 294 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 975, 1257, 1266, 1467 |
| PctI | GAATGC | 1 cut(s) | 188 |
| PdiI | GCCGGC | 1 cut(s) | 7 |
| PdmI | GAANNNNTTC | 1 cut(s) | 133 |
| PfeI | GAWTC | 4 cut(s) | 166, 326, 637, 942 |
| Pfl23II | CGTACG | 1 cut(s) | 1270 |
| PkrI | GCNGC | 8 cut(s) | 110, 148, 259, 530, 829, 964, 1396, 1699 |
| PleI | GAGTC | 1 cut(s) | 1278 |
| PluTI | GGCGCC | 1 cut(s) | 1021 |
| PpsI | GAGTC | 1 cut(s) | 1278 |
| Ppu21I | YACGTR | 2 cut(s) | 817, 1486 |
| PscI | ACATGT | 1 cut(s) | 294 |
| Psp6I | CCWGG | 2 cut(s) | 1648, 1719 |
| PspFI | CCCAGC | 1 cut(s) | 1183 |
| PspGI | CCWGG | 2 cut(s) | 1648, 1719 |
| PspLI | CGTACG | 1 cut(s) | 1270 |
| PspN4I | GGNNCC | 4 cut(s) | 91, 646, 1019, 1646 |
| PspPI | GGNCC | 2 cut(s) | 279, 562 |
| PstNI | CAGNNNCTG | 1 cut(s) | 725 |
| PsuI | RGATCY | 1 cut(s) | 1644 |
| RsaI | GTAC | 9 cut(s) | 76, 234, 410, 819, 1027, 1087, 1272, 1484, 1748 |
| RsaNI | GTAC | 9 cut(s) | 75, 233, 409, 818, 1026, 1086, 1271, 1483, 1747 |
| RseI | CAYNNNNRTG | 5 cut(s) | 161, 879, 1115, 1334, 1484 |
| SaqAI | TTAA | 5 cut(s) | 780, 1050, 1370, 1529, 1659 |
| SatI | GCNGC | 8 cut(s) | 109, 147, 258, 529, 828, 963, 1395, 1698 |
| Sau3AI | GATC | 4 cut(s) | 852, 1338, 1644, 1714 |
| Sau96I | GGNCC | 2 cut(s) | 279, 562 |
| SchI | GAGTC | 1 cut(s) | 1278 |
| ScrFI | CCNGG | 2 cut(s) | 1650, 1721 |
| SduI | GDGCHC | 2 cut(s) | 1458, 1549 |
| SfaNI | GCATC | 1 cut(s) | 722 |
| SfcI | CTRYAG | 2 cut(s) | 699, 717 |
| SfoI | GGCGCC | 1 cut(s) | 1019 |
| SfuI | TTCGAA | 1 cut(s) | 470 |
| SinI | GGWCC | 2 cut(s) | 279, 562 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 161, 879, 1115, 1334, 1484 |
| SmlI | CTYRAG | 1 cut(s) | 422 |
| SmoI | CTYRAG | 1 cut(s) | 422 |
| Sse9I | AATT | 7 cut(s) | 150, 472, 479, 603, 1074, 1387, 1499 |
| SsiI | CCGC | 7 cut(s) | 109, 438, 528, 560, 756, 797, 1395 |
| SspDI | GGCGCC | 1 cut(s) | 1017 |
| SspI | AATATT | 2 cut(s) | 666, 1798 |
| SspMI | CTAG | 3 cut(s) | 518, 804, 1620 |
| StyD4I | CCNGG | 2 cut(s) | 1648, 1719 |
| StyI | CCWWGG | 2 cut(s) | 764, 1013 |
| TaaI | ACNGT | 4 cut(s) | 289, 700, 1030, 1511 |
| TaiI | ACGT | 4 cut(s) | 410, 819, 860, 1488 |
| TaqI | TCGA | 4 cut(s) | 470, 599, 1203, 1251 |
| TasI | AATT | 7 cut(s) | 150, 472, 479, 603, 1074, 1387, 1499 |
| TatI | WGTACW | 2 cut(s) | 1025, 1085 |
| TauI | GCSGC | 3 cut(s) | 111, 531, 1397 |
| TfiI | GAWTC | 4 cut(s) | 166, 326, 637, 942 |
| Tru1I | TTAA | 5 cut(s) | 780, 1050, 1370, 1529, 1659 |
| Tru9I | TTAA | 5 cut(s) | 780, 1050, 1370, 1529, 1659 |
| TscAI | CASTG | 1 cut(s) | 1035 |
| TseFI | GTSAC | 5 cut(s) | 396, 593, 812, 970, 1030 |
| TseI | GCWGC | 5 cut(s) | 146, 257, 827, 962, 1697 |
| Tsp45I | GTSAC | 5 cut(s) | 396, 593, 812, 970, 1030 |
| TspDTI | ATGAA | 6 cut(s) | 54, 1166, 1222, 1468, 1625, 1806 |
| TspGWI | ACGGA | 1 cut(s) | 1288 |
| TspRI | CASTG | 1 cut(s) | 1035 |
| VneI | GTGCAC | 1 cut(s) | 1545 |
| VpaK11BI | GGWCC | 2 cut(s) | 279, 562 |
| XapI | RAATTY | 3 cut(s) | 472, 479, 1499 |
| XceI | RCATGY | 2 cut(s) | 298, 1195 |
| XmnI | GAANNNNTTC | 1 cut(s) | 133 |
| XspI | CTAG | 3 cut(s) | 518, 804, 1620 |