FvH4_1g00300

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000113
Physical Location & Seq
Forward (+)
153823 .. 155409
1587 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g00300.t1

Sequence Viewer

Length: 1269 bp
ATGGAAACAAGCAACAGCAGCAGCTCATTTTCCATTGCTAGCAAAGATCTTCCTTGCGAGATCATAGAGGAAATTCTGCTCCAGCTGCCTGTCAAGTCGCTGCTCCGTTTCAAATGCGTAAGCAAATCGTGGCTTAATCTCATCTCCGACCACAAATTCATCAAGTCACACCTTCACCAGTCCACCAAACAACACCCTCCTCATGATCATGATGGTGCCTGTGGTGATGGAGTTTCAAACACACATCTCATGCTCTCCTCCACATCTCTCATTCACTCCCTCCACCTGCAGCTACCCAATACCACACAAGAAGAACAAGTCCCAGCTGCGACTACTGATGCAGAAGTTGTACTCGAATCCATTGTTGAGTATCCGGTGACGTCGACGGTGAGGCGGCCATCTGTCAAAGACATCAAGATCGTCGGTTCCTGCAACGGTTTGCTGTGCTTGGTTCTCGACTCCCAACACATGATCATATACAACCCCTCCACCAGGCATGTTCAGGAAGTCCCCTGCCCGGAGGAAACTGTAGTCGGTAAAGATTACTTCTACGGTTTCGGTTATGATTCTCGCAACGACGACTGTAAGATAGTGAGGGCCACTTCTTCAAGTAGGGATGGCAATTTCGTCACCCAACTCGACATCTTTACTTTGAAGACCAATGCTTGGAGGACAAAAACCAAAGCCCTACCCTTTTATTTCATGTCCAGCTTGGTTGGTACCCTTCTCAATGGGGCTCTACACTGGGCTGTCCGTCGAGGAATCAACATCAGTCCTACCGCTGACAGCGATGACCATGACCACAGACCTTTCGGGATCGTCTCCTTTGATCTGACGGAGGAGACCTACAAAGAGGTGCCGCTGCCGTGTGACGGTGACAAGCAATTCTCGTTCTACGGGTTGGGGGTGTTAGGAGGGTGTCTGAGTATGCTCCACAGCCCCCATGGGTCTGATTATCAAGTGTGGGTTATGAAGGAGTATGGAGTCAAGGCGTCTTGGAGCGTGTTCACAACCATCCCACAGAAGATGGAGGATTCTAAGGAATACATAGGACTGATGTCTCTTTTGTGCGTTTTGAAGAACGGTGAAATTCTTATGATGTTGCACAACCACAAGAAGGTTGTGATATATAATCCCGGACAGAGGAAATTCCGAACCATATTCAGCGGTGAAATAGGCTCTTCCCGAGTGGCCTTATACCTCGAGACTCTAGTTTCACCAAAGATATATGCACCATCCTCATCATCACCATGCATCCTAGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

423

Amino Acids

46.98

Weight (kDa)

6.41

Isoelectric Point (pI)

52.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 54 1.1e-09 F-box domain
F-box-like PF12937 16 - 53 1.6e-06 F-box-like
FBA_1 PF07734 135 - 405 2e-29 F-box associated beta propeller domain
FBA_3 PF08268 136 - 393 6.9e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 294
AatII GACGTC 1 cut(s) 383
Acc36I ACCTGC 1 cut(s) 294
Acc65I GGTACC 1 cut(s) 719
AccB1I GGYRCC 3 cut(s) 215, 719, 856
AccB7I CCANNNNNTGG 1 cut(s) 666
AccI GTMKAC 1 cut(s) 383
AciI CCGC 4 cut(s) 394, 780, 860, 1167
AclWI GGATC 1 cut(s) 824
AcoI YGGCCR 1 cut(s) 395
AcsI RAATTY 4 cut(s) 72, 155, 1089, 1148
AcyI GRCGYC 2 cut(s) 380, 992
AfaI GTAC 2 cut(s) 351, 721
AfiI CCNNNNNNNGG 6 cut(s) 492, 517, 666, 872, 1117, 1143
AgsI TTSAA 5 cut(s) 112, 237, 609, 655, 1078
AjnI CCWGG 1 cut(s) 491
AluBI AGCT 6 cut(s) 24, 85, 292, 326, 711, 1262
AluI AGCT 6 cut(s) 24, 85, 292, 326, 711, 1262
Alw26I GTCTC 4 cut(s) 826, 836, 1065, 1199
AlwI GGATC 1 cut(s) 824
Ama87I CYCGRG 2 cut(s) 1185, 1202
AoxI GGCC 3 cut(s) 395, 597, 1191
ApeKI GCWGC 8 cut(s) 18, 21, 85, 100, 289, 326, 862, 1262
ApoI RAATTY 4 cut(s) 72, 155, 1089, 1148
Asp718I GGTACC 1 cut(s) 719
AspS9I GGNCC 1 cut(s) 597
AsuC2I CCSGG 2 cut(s) 518, 1137
AsuNHI GCTAGC 1 cut(s) 38
AvaI CYCGRG 2 cut(s) 1185, 1202
BanI GGYRCC 3 cut(s) 215, 719, 856
BanII GRGCYC 1 cut(s) 739
BbsI GAAGAC 1 cut(s) 662
BbvI GCAGC 8 cut(s) 30, 33, 72, 87, 301, 313, 849, 1249
BccI CCATC 7 cut(s) 206, 221, 406, 611, 1021, 1022, 1243
BceAI ACGGC 1 cut(s) 850
BciT130I CCWGG 1 cut(s) 493
BciVI GTATCC 1 cut(s) 381
BclI TGATCA 2 cut(s) 205, 471
BcnI CCSGG 2 cut(s) 518, 1137
BcoDI GTCTC 4 cut(s) 826, 836, 1065, 1199
BfaI CTAG 3 cut(s) 39, 1211, 1259
BfmI CTRYAG 2 cut(s) 287, 528
BfuAI ACCTGC 1 cut(s) 294
BfuI GTATCC 1 cut(s) 381
BglII AGATCT 1 cut(s) 46
Bme1390I CCNGG 3 cut(s) 493, 518, 1137
BmeT110I CYCGRG 2 cut(s) 1185, 1202
BmgT120I GGNCC 1 cut(s) 597
BmiI GGNNCC 4 cut(s) 217, 427, 721, 858
BmrFI CCNGG 3 cut(s) 493, 518, 1137
BmrI ACTGGG 1 cut(s) 754
BmsI GCATC 2 cut(s) 328, 1263
BmtI GCTAGC 1 cut(s) 42
BmuI ACTGGG 1 cut(s) 754
BoxI GACNNNNGTC 1 cut(s) 1057
BpiI GAAGAC 1 cut(s) 662
BpmI CTGGAG 1 cut(s) 65
BpuMI CCSGG 2 cut(s) 518, 1137
BsaHI GRCGYC 2 cut(s) 380, 992
BsaI GGTCTC 1 cut(s) 836
BsaJI CCNNGG 1 cut(s) 943
BsaWI WCCGGW 1 cut(s) 373
BsaXI ACNNNNNCTCC 2 cut(s) 470, 500
Bsc4I CCNNNNNNNGG 6 cut(s) 492, 517, 666, 872, 1117, 1143
Bse1I ACTGG 2 cut(s) 178, 749
Bse3DI GCAATG 1 cut(s) 33
BseBI CCWGG 1 cut(s) 493
BseDI CCNNGG 1 cut(s) 943
BseGI GGATG 4 cut(s) 622, 1014, 1235, 1254
BseLI CCNNNNNNNGG 6 cut(s) 492, 517, 666, 872, 1117, 1143
BseMI GCAATG 1 cut(s) 33
BseMII CTCAG 1 cut(s) 914
BseNI ACTGG 2 cut(s) 178, 749
BseRI GAGGAG 3 cut(s) 189, 247, 854
BseXI GCAGC 8 cut(s) 30, 33, 72, 87, 301, 313, 849, 1249
BseYI CCCAGC 1 cut(s) 322
BshFI GGCC 3 cut(s) 397, 599, 1193
BshNI GGYRCC 3 cut(s) 215, 719, 856
BsiHKCI CYCGRG 2 cut(s) 1185, 1202
BsiSI CCGG 3 cut(s) 374, 518, 1137
BslFI GGGAC 2 cut(s) 305, 494
BslI CCNNNNNNNGG 6 cut(s) 492, 517, 666, 872, 1117, 1143
BsmAI GTCTC 4 cut(s) 826, 836, 1065, 1199
BsmBI CGTCTC 1 cut(s) 826
BsmFI GGGAC 2 cut(s) 305, 494
BsnI GGCC 3 cut(s) 397, 599, 1193
Bso31I GGTCTC 1 cut(s) 836
BsoBI CYCGRG 2 cut(s) 1185, 1202
Bsp1286I GDGCHC 1 cut(s) 739
Bsp143I GATC 7 cut(s) 46, 60, 205, 417, 471, 816, 829
Bsp19I CCATGG 1 cut(s) 943
BspACI CCGC 4 cut(s) 394, 780, 860, 1167
BspANI GGCC 3 cut(s) 397, 599, 1193
BspCNI CTCAG 1 cut(s) 915
BspHI TCATGA 2 cut(s) 202, 208
BspLI GGNNCC 4 cut(s) 217, 427, 721, 858
BspMAI CTGCAG 1 cut(s) 291
BspMI ACCTGC 1 cut(s) 294
BspOI GCTAGC 1 cut(s) 42
BspPI GGATC 1 cut(s) 824
BspQI GCTCTTC 1 cut(s) 1186
BspT107I GGYRCC 3 cut(s) 215, 719, 856
BspTNI GGTCTC 1 cut(s) 836
BsrDI GCAATG 1 cut(s) 33
BsrI ACTGG 2 cut(s) 178, 749
BssECI CCNNGG 1 cut(s) 943
BssMI GATC 7 cut(s) 46, 60, 205, 417, 471, 816, 829
BssNI GRCGYC 2 cut(s) 380, 992
BssT1I CCWWGG 1 cut(s) 943
Bst2UI CCWGG 1 cut(s) 493
Bst4CI ACNGT 7 cut(s) 388, 437, 529, 554, 584, 875, 1085
Bst6I CTCTTC 1 cut(s) 1186
BstACI GRCGYC 2 cut(s) 380, 992
BstC8I GCNNGC 1 cut(s) 40
BstDEI CTNAG 3 cut(s) 923, 1038, 1266
BstDSI CCRYGG 1 cut(s) 943
BstENI CCTNNNNNAGG 1 cut(s) 490
BstF5I GGATG 4 cut(s) 622, 1014, 1235, 1254
BstKTI GATC 7 cut(s) 49, 63, 208, 420, 474, 819, 832
BstMAI GTCTC 4 cut(s) 826, 836, 1065, 1199
BstMBI GATC 7 cut(s) 46, 60, 205, 417, 471, 816, 829
BstMWI GCNNNNNNNGC 2 cut(s) 18, 85
BstNI CCWGG 1 cut(s) 493
BstNSI RCATGY 1 cut(s) 500
BstPAI GACNNNNGTC 1 cut(s) 1057
BstSCI CCNGG 3 cut(s) 491, 516, 1135
BstSFI CTRYAG 2 cut(s) 287, 528
BstV1I GCAGC 8 cut(s) 30, 33, 72, 87, 301, 313, 849, 1249
BstV2I GAAGAC 1 cut(s) 662
BstX2I RGATCY 1 cut(s) 46
BstYI RGATCY 1 cut(s) 46
BsuI GTATCC 1 cut(s) 381
BsuRI GGCC 3 cut(s) 397, 599, 1193
BtgI CCRYGG 1 cut(s) 943
BtgZI GCGATG 1 cut(s) 804
BtsCI GGATG 4 cut(s) 622, 1014, 1235, 1254
BtsIMutI CAGTG 1 cut(s) 742
BveI ACCTGC 1 cut(s) 294
Cac8I GCNNGC 1 cut(s) 40
CciI TCATGA 2 cut(s) 202, 208
Cfr13I GGNCC 1 cut(s) 597
CseI GACGC 1 cut(s) 981
Csp6I GTAC 2 cut(s) 350, 720
CviAII CATG 9 cut(s) 203, 209, 250, 469, 497, 703, 797, 944, 1251
CviQI GTAC 2 cut(s) 350, 720
DdeI CTNAG 3 cut(s) 923, 1038, 1266
DpnI GATC 7 cut(s) 48, 62, 207, 419, 473, 818, 831
DpnII GATC 7 cut(s) 46, 60, 205, 417, 471, 816, 829
EaeI YGGCCR 1 cut(s) 395
Eam1104I CTCTTC 1 cut(s) 1186
EarI CTCTTC 1 cut(s) 1186
Eco130I CCWWGG 1 cut(s) 943
Eco24I GRGCYC 1 cut(s) 739
Eco31I GGTCTC 1 cut(s) 836
Eco88I CYCGRG 2 cut(s) 1185, 1202
EcoNI CCTNNNNNAGG 1 cut(s) 490
EcoRII CCWGG 1 cut(s) 491
EcoT14I CCWWGG 1 cut(s) 943
EcoT22I ATGCAT 1 cut(s) 1256
EcoT38I GRGCYC 1 cut(s) 739
ErhI CCWWGG 1 cut(s) 943
Esp3I CGTCTC 1 cut(s) 826
FaeI CATG 9 cut(s) 206, 212, 253, 472, 500, 706, 800, 947, 1254
FaqI GGGAC 2 cut(s) 305, 494
FatI CATG 9 cut(s) 202, 208, 249, 468, 496, 702, 796, 943, 1250
FbaI TGATCA 2 cut(s) 205, 471
FblI GTMKAC 1 cut(s) 383
FokI GGATG 4 cut(s) 629, 1001, 1222, 1241
FriOI GRGCYC 1 cut(s) 739
FspBI CTAG 3 cut(s) 39, 1211, 1259
GsaI CCCAGC 1 cut(s) 326
GsuI CTGGAG 1 cut(s) 65
HaeIII GGCC 3 cut(s) 397, 599, 1193
HapII CCGG 3 cut(s) 374, 518, 1137
HgaI GACGC 1 cut(s) 981
Hin1I GRCGYC 2 cut(s) 380, 992
Hin1II CATG 9 cut(s) 206, 212, 253, 472, 500, 706, 800, 947, 1254
HincII GTYRAC 1 cut(s) 384
HindII GTYRAC 1 cut(s) 384
HinfI GANTC 7 cut(s) 356, 458, 566, 762, 984, 1034, 1207
HpaII CCGG 3 cut(s) 374, 518, 1137
Hpy166II GTNNAC 3 cut(s) 183, 384, 1008
Hpy188I TCNGA 5 cut(s) 148, 834, 924, 952, 1154
Hpy188III TCNNGA 8 cut(s) 203, 209, 415, 455, 503, 814, 1185, 1204
Hpy8I GTNNAC 3 cut(s) 183, 384, 1008
Hpy99I CGWCG 5 cut(s) 385, 388, 425, 581, 759
HpyAV CCTTC 4 cut(s) 182, 734, 967, 1111
HpyCH4III ACNGT 7 cut(s) 388, 437, 529, 554, 584, 875, 1085
HpyCH4IV ACGT 1 cut(s) 380
HpyCH4V TGCA 6 cut(s) 289, 341, 432, 1105, 1232, 1254
HpyF10VI GCNNNNNNNGC 2 cut(s) 18, 85
HpyF3I CTNAG 3 cut(s) 923, 1038, 1266
HpySE526I ACGT 1 cut(s) 380
Hsp92I GRCGYC 2 cut(s) 380, 992
Hsp92II CATG 9 cut(s) 206, 212, 253, 472, 500, 706, 800, 947, 1254
KpnI GGTACC 1 cut(s) 723
Ksp22I TGATCA 2 cut(s) 205, 471
Kzo9I GATC 7 cut(s) 46, 60, 205, 417, 471, 816, 829
LguI GCTCTTC 1 cut(s) 1186
LmnI GCTCC 4 cut(s) 84, 108, 936, 999
Lsp1109I GCAGC 8 cut(s) 30, 33, 72, 87, 301, 313, 849, 1249
LweI GCATC 2 cut(s) 328, 1263
MaeI CTAG 3 cut(s) 39, 1211, 1259
MaeII ACGT 1 cut(s) 380
MaeIII GTNAC 5 cut(s) 165, 376, 628, 869, 875
MalI GATC 7 cut(s) 48, 62, 207, 419, 473, 818, 831
MboI GATC 7 cut(s) 46, 60, 205, 417, 471, 816, 829
MboII GAAGA 7 cut(s) 41, 323, 597, 667, 1036, 1090, 1173
MflI RGATCY 1 cut(s) 46
MhlI GDGCHC 1 cut(s) 739
MluCI AATT 6 cut(s) 72, 155, 622, 884, 1089, 1148
MlyI GAGTC 3 cut(s) 452, 993, 1201
MmeI TCCRAC 1 cut(s) 171
Mph1103I ATGCAT 1 cut(s) 1256
MseI TTAA 1 cut(s) 135
MslI CAYNNNNRTG 3 cut(s) 207, 213, 1249
MspA1I CMGCKG 5 cut(s) 85, 326, 782, 862, 1167
MspI CCGG 3 cut(s) 374, 518, 1137
MspR9I CCNGG 3 cut(s) 493, 518, 1137
MvaI CCWGG 1 cut(s) 493
MwoI GCNNNNNNNGC 2 cut(s) 18, 85
NciI CCSGG 2 cut(s) 518, 1137
NcoI CCATGG 1 cut(s) 943
NdeII GATC 7 cut(s) 46, 60, 205, 417, 471, 816, 829
NheI GCTAGC 1 cut(s) 38
NlaIII CATG 9 cut(s) 206, 212, 253, 472, 500, 706, 800, 947, 1254
NlaIV GGNNCC 4 cut(s) 217, 427, 721, 858
NmuCI GTSAC 5 cut(s) 165, 376, 628, 869, 875
NsiI ATGCAT 1 cut(s) 1256
NspI RCATGY 1 cut(s) 500
PaeR7I CTCGAG 1 cut(s) 1202
PagI TCATGA 2 cut(s) 202, 208
PaqCI CACCTGC 1 cut(s) 294
PciSI GCTCTTC 1 cut(s) 1186
PfeI GAWTC 4 cut(s) 356, 566, 762, 1034
PflMI CCANNNNNTGG 1 cut(s) 666
PfoI TCCNGGA 1 cut(s) 1135
PleI GAGTC 3 cut(s) 452, 992, 1201
PpsI GAGTC 3 cut(s) 452, 992, 1201
PshAI GACNNNNGTC 1 cut(s) 1057
Psp6I CCWGG 1 cut(s) 491
PspFI CCCAGC 1 cut(s) 322
PspGI CCWGG 1 cut(s) 491
PspN4I GGNNCC 4 cut(s) 217, 427, 721, 858
PspPI GGNCC 1 cut(s) 597
PstI CTGCAG 1 cut(s) 291
PsuI RGATCY 1 cut(s) 46
PvuII CAGCTG 2 cut(s) 85, 326
RsaI GTAC 2 cut(s) 351, 721
RsaNI GTAC 2 cut(s) 350, 720
RseI CAYNNNNRTG 3 cut(s) 207, 213, 1249
SalI GTCGAC 1 cut(s) 382
SapI GCTCTTC 1 cut(s) 1186
SaqAI TTAA 1 cut(s) 135
Sau3AI GATC 7 cut(s) 46, 60, 205, 417, 471, 816, 829
Sau96I GGNCC 1 cut(s) 597
SchI GAGTC 3 cut(s) 452, 993, 1201
ScrFI CCNGG 3 cut(s) 493, 518, 1137
SduI GDGCHC 1 cut(s) 739
SfaNI GCATC 2 cut(s) 328, 1263
SfcI CTRYAG 2 cut(s) 287, 528
Sfr274I CTCGAG 1 cut(s) 1202
SgrDI CGTCGACG 1 cut(s) 382
SlaI CTCGAG 1 cut(s) 1202
SmiMI CAYNNNNRTG 3 cut(s) 207, 213, 1249
SmlI CTYRAG 1 cut(s) 1202
SmoI CTYRAG 1 cut(s) 1202
Sse9I AATT 6 cut(s) 72, 155, 622, 884, 1089, 1148
SsiI CCGC 4 cut(s) 394, 780, 860, 1167
SspMI CTAG 3 cut(s) 39, 1211, 1259
StyD4I CCNGG 3 cut(s) 491, 516, 1135
StyI CCWWGG 1 cut(s) 943
TaaI ACNGT 7 cut(s) 388, 437, 529, 554, 584, 875, 1085
TaiI ACGT 1 cut(s) 383
TaqI TCGA 6 cut(s) 354, 383, 456, 639, 757, 1203
TasI AATT 6 cut(s) 72, 155, 622, 884, 1089, 1148
TatI WGTACW 1 cut(s) 349
TauI GCSGC 2 cut(s) 397, 862
TfiI GAWTC 4 cut(s) 356, 566, 762, 1034
Tru1I TTAA 1 cut(s) 135
Tru9I TTAA 1 cut(s) 135
TscAI CASTG 1 cut(s) 749
TseFI GTSAC 5 cut(s) 165, 376, 628, 869, 875
TseI GCWGC 8 cut(s) 18, 21, 85, 100, 289, 326, 862, 1262
Tsp45I GTSAC 5 cut(s) 165, 376, 628, 869, 875
TspDTI ATGAA 3 cut(s) 148, 691, 986
TspGWI ACGGA 3 cut(s) 95, 743, 851
TspRI CASTG 1 cut(s) 749
Van91I CCANNNNNTGG 1 cut(s) 666
XagI CCTNNNNNAGG 1 cut(s) 490
XapI RAATTY 4 cut(s) 72, 155, 1089, 1148
XceI RCATGY 1 cut(s) 500
XcmI CCANNNNNNNNNTGG 1 cut(s) 941
XhoI CTCGAG 1 cut(s) 1202
XmiI GTMKAC 1 cut(s) 383
XspI CTAG 3 cut(s) 39, 1211, 1259
ZraI GACGTC 1 cut(s) 381
Zsp2I ATGCAT 1 cut(s) 1256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.