pycom17g11570

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000113
Physical Location & Seq
Forward (+)
9140892 .. 9142183
1292 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g11570.1

Sequence Viewer

Length: 1239 bp
ATGAAGTACCTTGTCGACACAATGCTTTCTGCAATGACAAAATCAGAGTGTTGTTCTTGTATTTACCGCCTTTTTCCAAGAATCTCCACTTCGAAACTCCCGCCAGCAGCTGGAAGCAACACTACCACGGCGGACGGCCCCAGTAGCCCCCGGCAGCTGAAGCAACCTCCCCCCTCTGATGGTAAACTCCGTCAACGAGTACCTCTCATTGACTACAACGACATTATTATCGAGATCCTCTCGAGGCTCCCAGTCAGATCTTTACTCCAATTTCGGTGTGTATGCAAGTCATGGCGCGCTTTAATCTCCAATCCTCATTTCGTTACGAAGCACCTCAGCCACGCTGTACTCACATGCGTGAACAACAACAGAACCTTCACCCTCTTTTTCTCATCCACGCGTATCCAGTCCATTGTCCACGTCGCATTGACTGATCAGCAGAGTGATTCTCATGTTCGTGTTACAGGTAAAGAGCTTGATTTTCCAGTGAGGATCCCGGATATTGTTCTTACACGAATTGTGGGTTCCTGCGACGGCTTGATTTGTCTACAAGTAAACTGCAACAAAATTATCATATGGAATCCTTGTACTGGGCAGTCCAAGGTATTACCAAAACCTCTTTATTCTGGTTCGCTGTTTTATGGATTCGGGTATGATTCCACCACGGATGATTACAAGGTAATCCGAGGATCGTCTAAAACAACACTTGGTTCTAAAGAAGTCACGATTCAAGTTTTCTCACTCAAATCCGATTCATGGAGGAGGAGTGCTGACGATGATCGCGGCAATTATATTCACTTGAAAGGGAAGGGTTGCTTCTTAAACGGAGCTCTGCATTGGGTAGAAGTTAGTATGGTTGCTTCGCGAATTTTGTCTTTTGATTTAGCAGAGGAGAAATTTAAGGAGATGTTACCATTGCCCTACCTTGGCAACAAAAACTGTGTCTTTGTGGGAGTTGGTGCTGGTAAAAATTGTCTATTTGTGTATTCTTACCCGATGGAGACGGATCTTCAGATATGGGTGATGAAGGAGTACGGAGTCGCAAAATCTTGGACTAAAGTCCCTCTATGCATTTTAGAGAATGATGAAGTTTTGTTGGACTACAAGCGAAACATATTGGCGTTGTATAATCCGAAGGGAAAGACATTTAGAAACATTGCTGTCGGGACTCAGTCGGAAGTCGCGGTTTACATGGAAACGTTAGTCTCGCCGGTTACCGGCAGGGGAACGGTCATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

413

Amino Acids

46.11

Weight (kDa)

9.13

Isoelectric Point (pI)

40.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 73 - 107 2.4e-10 F-box domain
F-box-like PF12937 73 - 107 2.2e-08 F-box-like
FBA_1 PF07734 132 - 356 3.6e-34 F-box associated beta propeller domain
FBA_3 PF08268 135 - 366 7.2e-26 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 110
AccI GTMKAC 2 cut(s) 15, 547
AccII CGCG 5 cut(s) 297, 400, 783, 865, 1184
AciI CCGC 5 cut(s) 67, 101, 131, 783, 1184
AclI AACGTT 1 cut(s) 1199
AclWI GGATC 5 cut(s) 229, 487, 500, 697, 1014
AcsI RAATTY 2 cut(s) 867, 896
AcuI CTGAAG 2 cut(s) 179, 995
AfaI GTAC 5 cut(s) 8, 201, 348, 589, 1034
AfiI CCNNNNNNNGG 6 cut(s) 110, 179, 590, 756, 926, 1217
AflIII ACRYGT 1 cut(s) 398
AgsI TTSAA 2 cut(s) 731, 802
AjiI CACGTC 1 cut(s) 421
AjuI GAANNNNNNNTTGG 2 cut(s) 302, 334
AleI CACNNNNGTG 1 cut(s) 356
AluBI AGCT 4 cut(s) 110, 157, 475, 830
AluI AGCT 4 cut(s) 110, 157, 475, 830
Alw21I GWGCWC 1 cut(s) 832
Alw26I GTCTC 2 cut(s) 995, 1210
AlwI GGATC 5 cut(s) 229, 487, 500, 697, 1014
AlwNI CAGNNNCTG 1 cut(s) 110
Ama87I CYCGRG 1 cut(s) 241
AoxI GGCC 1 cut(s) 136
ApeKI GCWGC 2 cut(s) 107, 154
ApoI RAATTY 2 cut(s) 867, 896
ArsI GACNNNNNNTTYG 2 cut(s) 927, 959
AspLEI GCGC 2 cut(s) 297, 299
AspS9I GGNCC 1 cut(s) 137
AsuC2I CCSGG 2 cut(s) 151, 497
AsuHPI GGTGA 2 cut(s) 370, 1033
AsuII TTCGAA 1 cut(s) 92
AvaI CYCGRG 1 cut(s) 241
BamHI GGATCC 1 cut(s) 492
BanII GRGCYC 1 cut(s) 832
BarI GAAGNNNNNNTAC 4 cut(s) 106, 138, 844, 876
Bbv12I GWGCWC 1 cut(s) 832
BbvCI CCTCAGC 1 cut(s) 335
BbvI GCAGC 2 cut(s) 119, 166
BccI CCATC 2 cut(s) 173, 991
BceAI ACGGC 3 cut(s) 144, 151, 550
BciVI GTATCC 1 cut(s) 413
BclI TGATCA 1 cut(s) 433
BcnI CCSGG 2 cut(s) 151, 497
BcoDI GTCTC 2 cut(s) 995, 1210
BfuI GTATCC 1 cut(s) 413
BglII AGATCT 1 cut(s) 257
BisI GCNGC 3 cut(s) 108, 155, 784
BlsI GCNGC 3 cut(s) 109, 156, 785
Bme1390I CCNGG 2 cut(s) 151, 497
BmeT110I CYCGRG 1 cut(s) 241
BmgBI CACGTC 1 cut(s) 421
BmgT120I GGNCC 1 cut(s) 137
BmiI GGNNCC 4 cut(s) 139, 248, 494, 526
BmrFI CCNGG 2 cut(s) 151, 497
BmrI ACTGGG 3 cut(s) 135, 245, 600
BmuI ACTGGG 3 cut(s) 135, 245, 600
BoxI GACNNNNGTC 1 cut(s) 1058
BplI GAGNNNNNCTC 6 cut(s) 189, 221, 224, 256, 433, 465
Bpu10I CCTNAGC 1 cut(s) 335
Bpu14I TTCGAA 1 cut(s) 92
BpuMI CCSGG 2 cut(s) 151, 497
BsaJI CCNNGG 6 cut(s) 126, 149, 600, 663, 685, 925
BsaXI ACNNNNNCTCC 2 cut(s) 751, 781
Bsc4I CCNNNNNNNGG 6 cut(s) 110, 179, 590, 756, 926, 1217
Bse118I RCCGGY 2 cut(s) 1210, 1217
Bse1I ACTGG 5 cut(s) 141, 251, 406, 485, 595
Bse3DI GCAATG 3 cut(s) 39, 914, 1155
BseDI CCNNGG 6 cut(s) 126, 149, 600, 663, 685, 925
BseGI GGATG 2 cut(s) 392, 673
BseLI CCNNNNNNNGG 6 cut(s) 110, 179, 590, 756, 926, 1217
BseMI GCAATG 3 cut(s) 39, 914, 1155
BseMII CTCAG 2 cut(s) 349, 1184
BseNI ACTGG 5 cut(s) 141, 251, 406, 485, 595
BsePI GCGCGC 1 cut(s) 295
BseRI GAGGAG 3 cut(s) 775, 778, 905
BseXI GCAGC 2 cut(s) 119, 166
Bsh1236I CGCG 5 cut(s) 297, 400, 783, 865, 1184
BshFI GGCC 1 cut(s) 138
BsiHKAI GWGCWC 1 cut(s) 832
BsiHKCI CYCGRG 1 cut(s) 241
BsiSI CCGG 4 cut(s) 151, 497, 1211, 1218
BslFI GGGAC 2 cut(s) 1046, 1180
BslI CCNNNNNNNGG 6 cut(s) 110, 179, 590, 756, 926, 1217
BsmAI GTCTC 2 cut(s) 995, 1210
BsmBI CGTCTC 1 cut(s) 995
BsmFI GGGAC 2 cut(s) 1046, 1180
BsnI GGCC 1 cut(s) 138
BsoBI CYCGRG 1 cut(s) 241
Bsp119I TTCGAA 1 cut(s) 92
Bsp1286I GDGCHC 1 cut(s) 832
Bsp143I GATC 7 cut(s) 234, 257, 433, 492, 689, 778, 1006
Bsp68I TCGCGA 1 cut(s) 865
BspACI CCGC 5 cut(s) 67, 101, 131, 783, 1184
BspANI GGCC 1 cut(s) 138
BspCNI CTCAG 2 cut(s) 348, 1183
BspFNI CGCG 5 cut(s) 297, 400, 783, 865, 1184
BspLI GGNNCC 4 cut(s) 139, 248, 494, 526
BspPI GGATC 5 cut(s) 229, 487, 500, 697, 1014
BspT104I TTCGAA 1 cut(s) 92
BsrDI GCAATG 3 cut(s) 39, 914, 1155
BsrFI RCCGGY 2 cut(s) 1210, 1217
BsrI ACTGG 5 cut(s) 141, 251, 406, 485, 595
BssAI RCCGGY 2 cut(s) 1210, 1217
BssECI CCNNGG 6 cut(s) 126, 149, 600, 663, 685, 925
BssHII GCGCGC 1 cut(s) 295
BssMI GATC 7 cut(s) 234, 257, 433, 492, 689, 778, 1006
BssT1I CCWWGG 2 cut(s) 600, 925
Bst4CI ACNGT 2 cut(s) 941, 1231
BstBI TTCGAA 1 cut(s) 92
BstC8I GCNNGC 2 cut(s) 105, 297
BstDEI CTNAG 2 cut(s) 335, 1170
BstDSI CCRYGG 2 cut(s) 126, 663
BstEII GGTNACC 1 cut(s) 1213
BstF5I GGATG 2 cut(s) 392, 673
BstFNI CGCG 5 cut(s) 297, 400, 783, 865, 1184
BstHHI GCGC 2 cut(s) 297, 299
BstKTI GATC 7 cut(s) 237, 260, 436, 495, 692, 781, 1009
BstMAI GTCTC 2 cut(s) 995, 1210
BstMBI GATC 7 cut(s) 234, 257, 433, 492, 689, 778, 1006
BstMWI GCNNNNNNNGC 2 cut(s) 144, 160
BstNSI RCATGY 1 cut(s) 357
BstPAI GACNNNNGTC 1 cut(s) 1058
BstPI GGTNACC 1 cut(s) 1213
BstSCI CCNGG 2 cut(s) 149, 495
BstUI CGCG 5 cut(s) 297, 400, 783, 865, 1184
BstV1I GCAGC 2 cut(s) 119, 166
BstX2I RGATCY 4 cut(s) 234, 257, 492, 1006
BstYI RGATCY 4 cut(s) 234, 257, 492, 1006
BsuI GTATCC 1 cut(s) 413
BsuRI GGCC 1 cut(s) 138
BtgI CCRYGG 2 cut(s) 126, 663
BtrI CACGTC 1 cut(s) 421
BtsCI GGATG 2 cut(s) 392, 673
BtsIMutI CAGTG 1 cut(s) 492
BtuMI TCGCGA 1 cut(s) 865
Cac8I GCNNGC 2 cut(s) 105, 297
CaiI CAGNNNCTG 1 cut(s) 110
CfoI GCGC 2 cut(s) 297, 299
Cfr10I RCCGGY 2 cut(s) 1210, 1217
Cfr13I GGNCC 1 cut(s) 137
Csp6I GTAC 5 cut(s) 7, 200, 347, 588, 1033
CviAII CATG 5 cut(s) 291, 354, 452, 756, 1192
CviJI RGCY 9 cut(s) 110, 138, 147, 157, 247, 339, 475, 537, 830
CviKI_1 RGCY 9 cut(s) 110, 138, 147, 157, 247, 339, 475, 537, 830
CviQI GTAC 5 cut(s) 7, 200, 347, 588, 1033
DdeI CTNAG 2 cut(s) 335, 1170
DpnI GATC 7 cut(s) 236, 259, 435, 494, 691, 780, 1008
DpnII GATC 7 cut(s) 234, 257, 433, 492, 689, 778, 1006
EciI GGCGGA 1 cut(s) 146
Ecl136II GAGCTC 1 cut(s) 830
Eco130I CCWWGG 2 cut(s) 600, 925
Eco24I GRGCYC 1 cut(s) 832
Eco53kI GAGCTC 1 cut(s) 830
Eco57I CTGAAG 2 cut(s) 179, 995
Eco88I CYCGRG 1 cut(s) 241
Eco91I GGTNACC 1 cut(s) 1213
EcoICRI GAGCTC 1 cut(s) 830
EcoO65I GGTNACC 1 cut(s) 1213
EcoT14I CCWWGG 2 cut(s) 600, 925
EcoT22I ATGCAT 1 cut(s) 1073
EcoT38I GRGCYC 1 cut(s) 832
ErhI CCWWGG 2 cut(s) 600, 925
Esp3I CGTCTC 1 cut(s) 995
FaeI CATG 5 cut(s) 294, 357, 455, 759, 1195
FalI AAGNNNNNCTT 2 cut(s) 800, 832
FaqI GGGAC 2 cut(s) 1046, 1180
FatI CATG 5 cut(s) 290, 353, 451, 755, 1191
FauI CCCGC 1 cut(s) 108
FauNDI CATATG 1 cut(s) 575
FbaI TGATCA 1 cut(s) 433
FblI GTMKAC 2 cut(s) 15, 547
Fnu4HI GCNGC 3 cut(s) 108, 155, 784
FokI GGATG 2 cut(s) 379, 680
FriOI GRGCYC 1 cut(s) 832
Fsp4HI GCNGC 3 cut(s) 108, 155, 784
GlaI GCGC 2 cut(s) 296, 298
GluI GCNGC 3 cut(s) 108, 155, 784
HaeIII GGCC 1 cut(s) 138
HapII CCGG 4 cut(s) 151, 497, 1211, 1218
HhaI GCGC 2 cut(s) 297, 299
Hin1II CATG 5 cut(s) 294, 357, 455, 759, 1195
Hin6I GCGC 2 cut(s) 295, 297
HinP1I GCGC 2 cut(s) 295, 297
HincII GTYRAC 2 cut(s) 16, 194
HindII GTYRAC 2 cut(s) 16, 194
HinfI GANTC 9 cut(s) 81, 446, 580, 645, 656, 727, 752, 1038, 1168
HpaII CCGG 4 cut(s) 151, 497, 1211, 1218
HphI GGTGA 2 cut(s) 370, 1033
Hpy166II GTNNAC 8 cut(s) 16, 185, 194, 361, 418, 548, 556, 1189
Hpy188I TCNGA 9 cut(s) 46, 178, 257, 686, 751, 1014, 1134, 1177, 1238
Hpy188III TCNNGA 5 cut(s) 232, 241, 724, 864, 1165
Hpy8I GTNNAC 8 cut(s) 16, 185, 194, 361, 418, 548, 556, 1189
Hpy99I CGWCG 2 cut(s) 425, 536
HpyAV CCTTC 4 cut(s) 385, 802, 1021, 1129
HpyCH4III ACNGT 2 cut(s) 941, 1231
HpyCH4IV ACGT 2 cut(s) 420, 1199
HpyCH4V TGCA 5 cut(s) 32, 285, 561, 835, 1071
HpyF10VI GCNNNNNNNGC 2 cut(s) 144, 160
HpyF3I CTNAG 2 cut(s) 335, 1170
HpySE526I ACGT 2 cut(s) 420, 1199
Hsp92II CATG 5 cut(s) 294, 357, 455, 759, 1195
HspAI GCGC 2 cut(s) 295, 297
Ksp22I TGATCA 1 cut(s) 433
Kzo9I GATC 7 cut(s) 234, 257, 433, 492, 689, 778, 1006
LmnI GCTCC 2 cut(s) 252, 827
Lsp1109I GCAGC 2 cut(s) 119, 166
MaeII ACGT 2 cut(s) 420, 1199
MaeIII GTNAC 5 cut(s) 322, 460, 721, 909, 1213
MalI GATC 7 cut(s) 236, 259, 435, 494, 691, 780, 1008
MboI GATC 7 cut(s) 234, 257, 433, 492, 689, 778, 1006
MboII GAAGA 1 cut(s) 1001
MflI RGATCY 4 cut(s) 234, 257, 492, 1006
MhlI GDGCHC 1 cut(s) 832
MluCI AATT 7 cut(s) 269, 516, 567, 787, 867, 896, 970
MluI ACGCGT 1 cut(s) 398
MlyI GAGTC 2 cut(s) 1047, 1162
MmeI TCCRAC 2 cut(s) 1077, 1155
Mph1103I ATGCAT 1 cut(s) 1073
MseI TTAA 3 cut(s) 302, 821, 900
MslI CAYNNNNRTG 2 cut(s) 356, 456
MspA1I CMGCKG 2 cut(s) 110, 157
MspI CCGG 4 cut(s) 151, 497, 1211, 1218
MspR9I CCNGG 2 cut(s) 151, 497
MvnI CGCG 5 cut(s) 297, 400, 783, 865, 1184
MwoI GCNNNNNNNGC 2 cut(s) 144, 160
NciI CCSGG 2 cut(s) 151, 497
NdeI CATATG 1 cut(s) 575
NdeII GATC 7 cut(s) 234, 257, 433, 492, 689, 778, 1006
NlaIII CATG 5 cut(s) 294, 357, 455, 759, 1195
NlaIV GGNNCC 4 cut(s) 139, 248, 494, 526
NmuCI GTSAC 1 cut(s) 721
NruI TCGCGA 1 cut(s) 865
NsiI ATGCAT 1 cut(s) 1073
NspI RCATGY 1 cut(s) 357
NspV TTCGAA 1 cut(s) 92
OliI CACNNNNGTG 1 cut(s) 356
PaeR7I CTCGAG 1 cut(s) 241
PauI GCGCGC 1 cut(s) 295
PfeI GAWTC 7 cut(s) 81, 446, 580, 645, 656, 727, 752
PflFI GACNNNGTC 1 cut(s) 1171
PflMI CCANNNNNTGG 1 cut(s) 110
PfoI TCCNGGA 1 cut(s) 495
PkrI GCNGC 3 cut(s) 109, 156, 785
PleI GAGTC 2 cut(s) 1046, 1162
PpsI GAGTC 2 cut(s) 1046, 1162
PshAI GACNNNNGTC 1 cut(s) 1058
Psp124BI GAGCTC 1 cut(s) 832
Psp1406I AACGTT 1 cut(s) 1199
PspEI GGTNACC 1 cut(s) 1213
PspN4I GGNNCC 4 cut(s) 139, 248, 494, 526
PspPI GGNCC 1 cut(s) 137
PstNI CAGNNNCTG 1 cut(s) 110
PsuI RGATCY 4 cut(s) 234, 257, 492, 1006
PsyI GACNNNGTC 1 cut(s) 1171
PteI GCGCGC 1 cut(s) 295
PvuII CAGCTG 2 cut(s) 110, 157
RruI TCGCGA 1 cut(s) 865
RsaI GTAC 5 cut(s) 8, 201, 348, 589, 1034
RsaNI GTAC 5 cut(s) 7, 200, 347, 588, 1033
RseI CAYNNNNRTG 2 cut(s) 356, 456
SacI GAGCTC 1 cut(s) 832
SalI GTCGAC 1 cut(s) 14
SaqAI TTAA 3 cut(s) 302, 821, 900
SatI GCNGC 3 cut(s) 108, 155, 784
Sau3AI GATC 7 cut(s) 234, 257, 433, 492, 689, 778, 1006
Sau96I GGNCC 1 cut(s) 137
SchI GAGTC 2 cut(s) 1047, 1162
ScrFI CCNGG 2 cut(s) 151, 497
SduI GDGCHC 1 cut(s) 832
Sfr274I CTCGAG 1 cut(s) 241
SfuI TTCGAA 1 cut(s) 92
SlaI CTCGAG 1 cut(s) 241
SmiMI CAYNNNNRTG 2 cut(s) 356, 456
SmlI CTYRAG 1 cut(s) 241
SmoI CTYRAG 1 cut(s) 241
Sse9I AATT 7 cut(s) 269, 516, 567, 787, 867, 896, 970
SsiI CCGC 5 cut(s) 67, 101, 131, 783, 1184
SstI GAGCTC 1 cut(s) 832
StyD4I CCNGG 2 cut(s) 149, 495
StyI CCWWGG 2 cut(s) 600, 925
TaaI ACNGT 2 cut(s) 941, 1231
TaiI ACGT 2 cut(s) 423, 1202
TaqI TCGA 4 cut(s) 15, 92, 231, 242
TasI AATT 7 cut(s) 269, 516, 567, 787, 867, 896, 970
TatI WGTACW 2 cut(s) 346, 587
TauI GCSGC 1 cut(s) 786
TfiI GAWTC 7 cut(s) 81, 446, 580, 645, 656, 727, 752
Tru1I TTAA 3 cut(s) 302, 821, 900
Tru9I TTAA 3 cut(s) 302, 821, 900
TscAI CASTG 1 cut(s) 492
TseFI GTSAC 1 cut(s) 721
TseI GCWGC 2 cut(s) 107, 154
Tsp45I GTSAC 1 cut(s) 721
TspDTI ATGAA 4 cut(s) 17, 744, 1040, 1101
TspGWI ACGGA 5 cut(s) 179, 680, 840, 1019, 1050
TspRI CASTG 1 cut(s) 492
Tth111I GACNNNGTC 1 cut(s) 1171
Van91I CCANNNNNTGG 1 cut(s) 110
XapI RAATTY 2 cut(s) 867, 896
XceI RCATGY 1 cut(s) 357
XhoI CTCGAG 1 cut(s) 241
XmiI GTMKAC 2 cut(s) 15, 547
Zsp2I ATGCAT 1 cut(s) 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.