Rw2G041880

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000113
Physical Location & Seq
Reverse (-)
68114007 .. 68115448
1442 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G041880.1

Sequence Viewer

Length: 1218 bp
ATGTCGGACGCTCTCTGCACTCGGCTGCAGCAACAACTGGTTCTCTCCGGTACCGGACCCAGCTCCGAGTCTCTTGATTTCGACGCCGTCATCGTCGAGATCCTCTCATGGCTGCCGGCCAAATCTCTGCTCCGATTCCGGTGCGTATGCAAAGCATGGCGGGCCTTGATCTCCGATCCATATTTCATCAGAAAACACCTCAGCTGCATCAACACCAAAATCAATAGCAGCTACTCTCTCCTTTTTAAGGATAAGAACTCCAGTTTCCGATCCATAGACTGTGAAGCATTATTCAAGTGTTCAAGCCATGTTGATGGTCCCGTTCCGAGCAGAGAGCTTGATTTTCCGGTAATTGATCCGCGGTTTGAATTTGAGTTTATTGAGATAATTGGTTCTTGCAATGGCTTGATATGTCTACTAATTGATTCGGATAGTTTAGTCTTTATGTTATGGAATCCTTGCACTAGAGAATCCAAGGTGTTACCGGAACCTCCTTCTGAGCTCTACCTAAAGTTTTATGGATTCGGTTATGATTCCACAACCGATGATTACAAGTTAATAGTGGGATTTTCTGCTTCCAGTGCCGGTGAATATGTTGCTTTTGTTTTTACATTAAAAACGGGTTCATGGAGGAAGGTTCAGAGCCTGAACCAGAATTTTAGGGTGCTTTGGAATGGCTGTTTGGTAAACGAAACTCTACATTGGGTATTAAATGAACGGGATGAGTTTCGTAGGGTGATTGCTTCCAAGTTAGTGTCATTTGACTTAGCCGAGGAGAAATTTCATGAGATTGCATTCCCATATTTTCCTAATTCTGTTGACAGATGTAATTTGGTTGCAAGAGTTGGAAATATTAGAAATTCTTTAATCTTACACTGTGGACCCATCTCGACCAGACCCATCTCAACCAGTTCTAGGTTAGATTTTAGGATTTGGGTGATGAAGGAATATGGAGTCGAGAAATCCTGGAATGAAGTCATGAAAATCCCTTCAGAGATTCTACCCGGAGATCATTTTAGGTGCGAGAGGCCTTTATGCATTTCTGATGATGGTGCAGCAACTTTGATTGATGTCTTTGATGTATATGACGATCGCTGCTTCTTTACATTATACAATCCGAAGGAAAAGACATGTAGGAACGTTACTGACAATTGTGTGTCTAAACCGGCAACTTATGTAGAAACTTTAGTTTCCCCATTAACAGGCAGTGGCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

405

Amino Acids

46.06

Weight (kDa)

5.66

Isoelectric Point (pI)

40.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 30 - 64 3.9e-10 F-box domain
F-box-like PF12937 30 - 65 1.2e-08 F-box-like
FBA_1 PF07734 123 - 397 1.9e-23 F-box associated beta propeller domain
FBA_3 PF08268 125 - 382 1.2e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 50
AccB1I GGYRCC 1 cut(s) 50
AccI GTMKAC 1 cut(s) 415
AccII CGCG 1 cut(s) 361
AciI CCGC 3 cut(s) 160, 359, 361
AclI AACGTT 1 cut(s) 1140
AclWI GGATC 4 cut(s) 94, 170, 264, 350
AcoI YGGCCR 1 cut(s) 117
AcsI RAATTY 4 cut(s) 368, 655, 779, 859
AcuI CTGAAG 1 cut(s) 975
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 1 cut(s) 52
AfiI CCNNNNNNNGG 3 cut(s) 247, 915, 1202
AflIII ACRYGT 1 cut(s) 1130
AgsI TTSAA 3 cut(s) 295, 303, 368
AjnI CCWGG 1 cut(s) 965
AjuI GAANNNNNNNTTGG 2 cut(s) 665, 697
AluBI AGCT 5 cut(s) 63, 204, 231, 337, 502
AluI AGCT 5 cut(s) 63, 204, 231, 337, 502
Alw21I GWGCWC 1 cut(s) 504
Alw26I GTCTC 1 cut(s) 75
AlwI GGATC 4 cut(s) 94, 170, 264, 350
AlwNI CAGNNNCTG 1 cut(s) 646
AoxI GGCC 3 cut(s) 117, 162, 1028
ApeKI GCWGC 7 cut(s) 25, 28, 112, 204, 228, 1055, 1095
ApoI RAATTY 4 cut(s) 368, 655, 779, 859
Asp718I GGTACC 1 cut(s) 50
AspS9I GGNCC 4 cut(s) 56, 162, 317, 881
AsuC2I CCSGG 1 cut(s) 1005
AsuHPI GGTGA 3 cut(s) 599, 748, 949
AvaII GGWCC 3 cut(s) 56, 317, 881
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 1 cut(s) 504
Bbv12I GWGCWC 1 cut(s) 504
BbvCI CCTCAGC 1 cut(s) 200
BbvI GCAGC 7 cut(s) 12, 40, 99, 191, 240, 1067, 1082
BccI CCATC 4 cut(s) 308, 893, 908, 1043
BceAI ACGGC 1 cut(s) 71
BcgI CGANNNNNNTGC 2 cut(s) 123, 157
BciT130I CCWGG 1 cut(s) 967
BcnI CCSGG 1 cut(s) 1005
BcoDI GTCTC 1 cut(s) 75
BfaI CTAG 2 cut(s) 465, 915
BfmI CTRYAG 1 cut(s) 26
BisI GCNGC 7 cut(s) 26, 29, 113, 205, 229, 1056, 1096
BlsI GCNGC 7 cut(s) 27, 30, 114, 206, 230, 1057, 1097
Bme1390I CCNGG 2 cut(s) 967, 1005
Bme18I GGWCC 3 cut(s) 56, 317, 881
BmgT120I GGNCC 4 cut(s) 56, 162, 317, 881
BmiI GGNNCC 5 cut(s) 52, 58, 319, 489, 883
BmrFI CCNGG 2 cut(s) 967, 1005
BmsI GCATC 1 cut(s) 216
BplI GAGNNNNNCTC 2 cut(s) 89, 121
BpmI CTGGAG 1 cut(s) 244
Bpu10I CCTNAGC 1 cut(s) 200
BpuMI CCSGG 1 cut(s) 1005
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 3 cut(s) 359, 474, 771
BsaWI WCCGGW 5 cut(s) 47, 53, 138, 346, 484
Bsc4I CCNNNNNNNGG 3 cut(s) 247, 915, 1202
Bse118I RCCGGY 3 cut(s) 115, 584, 1165
Bse1I ACTGG 4 cut(s) 42, 261, 579, 909
Bse3DI GCAATG 1 cut(s) 406
BseBI CCWGG 1 cut(s) 967
BseDI CCNNGG 3 cut(s) 359, 474, 771
BseGI GGATG 1 cut(s) 727
BseLI CCNNNNNNNGG 3 cut(s) 247, 915, 1202
BseMI GCAATG 1 cut(s) 406
BseMII CTCAG 2 cut(s) 214, 489
BseNI ACTGG 4 cut(s) 42, 261, 579, 909
BseRI GAGGAG 1 cut(s) 788
BseXI GCAGC 7 cut(s) 12, 40, 99, 191, 240, 1067, 1082
BseYI CCCAGC 1 cut(s) 59
BsgI GTGCAG 1 cut(s) 1074
Bsh1236I CGCG 1 cut(s) 361
Bsh1285I CGRYCG 1 cut(s) 1093
BshFI GGCC 3 cut(s) 119, 164, 1030
BshNI GGYRCC 1 cut(s) 50
BsiEI CGRYCG 1 cut(s) 1093
BsiHKAI GWGCWC 1 cut(s) 504
BsiSI CCGG 9 cut(s) 48, 54, 116, 139, 347, 485, 585, 1005, 1166
BslFI GGGAC 1 cut(s) 303
BslI CCNNNNNNNGG 3 cut(s) 247, 915, 1202
BsmAI GTCTC 1 cut(s) 75
BsmFI GGGAC 1 cut(s) 303
BsmI GAATGC 1 cut(s) 794
BsnI GGCC 3 cut(s) 119, 164, 1030
Bsp1286I GDGCHC 1 cut(s) 504
Bsp143I GATC 7 cut(s) 99, 168, 175, 269, 355, 1009, 1090
BspACI CCGC 3 cut(s) 160, 359, 361
BspANI GGCC 3 cut(s) 119, 164, 1030
BspCNI CTCAG 2 cut(s) 213, 490
BspFNI CGCG 1 cut(s) 361
BspHI TCATGA 2 cut(s) 784, 978
BspLI GGNNCC 5 cut(s) 52, 58, 319, 489, 883
BspMAI CTGCAG 1 cut(s) 30
BspPI GGATC 4 cut(s) 94, 170, 264, 350
BspT107I GGYRCC 1 cut(s) 50
BsrDI GCAATG 1 cut(s) 406
BsrFI RCCGGY 3 cut(s) 115, 584, 1165
BsrI ACTGG 4 cut(s) 42, 261, 579, 909
BssAI RCCGGY 3 cut(s) 115, 584, 1165
BssECI CCNNGG 3 cut(s) 359, 474, 771
BssMI GATC 7 cut(s) 99, 168, 175, 269, 355, 1009, 1090
BssNI GRCGYC 1 cut(s) 84
BssT1I CCWWGG 1 cut(s) 474
Bst2UI CCWGG 1 cut(s) 967
Bst4CI ACNGT 2 cut(s) 281, 878
BstACI GRCGYC 1 cut(s) 84
BstC8I GCNNGC 2 cut(s) 117, 162
BstDEI CTNAG 3 cut(s) 200, 498, 766
BstDSI CCRYGG 1 cut(s) 359
BstENI CCTNNNNNAGG 1 cut(s) 245
BstF5I GGATG 1 cut(s) 727
BstFNI CGCG 1 cut(s) 361
BstKTI GATC 7 cut(s) 102, 171, 178, 272, 358, 1012, 1093
BstMAI GTCTC 1 cut(s) 75
BstMBI GATC 7 cut(s) 99, 168, 175, 269, 355, 1009, 1090
BstMCI CGRYCG 1 cut(s) 1093
BstMWI GCNNNNNNNGC 2 cut(s) 161, 581
BstNI CCWGG 1 cut(s) 967
BstNSI RCATGY 1 cut(s) 1134
BstSCI CCNGG 2 cut(s) 965, 1003
BstSFI CTRYAG 1 cut(s) 26
BstUI CGCG 1 cut(s) 361
BstV1I GCAGC 7 cut(s) 12, 40, 99, 191, 240, 1067, 1082
BstX2I RGATCY 1 cut(s) 99
BstXI CCANNNNNNTGG 1 cut(s) 314
BstYI RGATCY 1 cut(s) 99
BsuRI GGCC 3 cut(s) 119, 164, 1030
BtgI CCRYGG 1 cut(s) 359
BtsCI GGATG 1 cut(s) 727
BtsI GCAGTG 1 cut(s) 1213
BtsIMutI CAGTG 3 cut(s) 586, 874, 1213
Cac8I GCNNGC 2 cut(s) 117, 162
CaiI CAGNNNCTG 1 cut(s) 646
CciI TCATGA 2 cut(s) 784, 978
Cfr10I RCCGGY 3 cut(s) 115, 584, 1165
Cfr13I GGNCC 4 cut(s) 56, 162, 317, 881
Cfr42I CCGCGG 1 cut(s) 362
CseI GACGC 2 cut(s) 17, 92
Csp6I GTAC 1 cut(s) 51
CviAII CATG 7 cut(s) 108, 156, 308, 627, 785, 979, 1131
CviQI GTAC 1 cut(s) 51
DdeI CTNAG 3 cut(s) 200, 498, 766
DpnI GATC 7 cut(s) 101, 170, 177, 271, 357, 1011, 1092
DpnII GATC 7 cut(s) 99, 168, 175, 269, 355, 1009, 1090
EaeI YGGCCR 1 cut(s) 117
Ecl136II GAGCTC 1 cut(s) 502
Eco130I CCWWGG 1 cut(s) 474
Eco147I AGGCCT 1 cut(s) 1030
Eco24I GRGCYC 1 cut(s) 504
Eco47I GGWCC 3 cut(s) 56, 317, 881
Eco53kI GAGCTC 1 cut(s) 502
Eco57I CTGAAG 1 cut(s) 975
EcoICRI GAGCTC 1 cut(s) 502
EcoNI CCTNNNNNAGG 1 cut(s) 245
EcoRII CCWGG 1 cut(s) 965
EcoT14I CCWWGG 1 cut(s) 474
EcoT22I ATGCAT 1 cut(s) 1040
EcoT38I GRGCYC 1 cut(s) 504
ErhI CCWWGG 1 cut(s) 474
FaeI CATG 7 cut(s) 111, 159, 311, 630, 788, 982, 1134
FaqI GGGAC 1 cut(s) 303
FatI CATG 7 cut(s) 107, 155, 307, 626, 784, 978, 1130
FauI CCCGC 1 cut(s) 153
FblI GTMKAC 1 cut(s) 415
Fnu4HI GCNGC 7 cut(s) 26, 29, 113, 205, 229, 1056, 1096
FokI GGATG 1 cut(s) 734
FriOI GRGCYC 1 cut(s) 504
Fsp4HI GCNGC 7 cut(s) 26, 29, 113, 205, 229, 1056, 1096
FspBI CTAG 2 cut(s) 465, 915
GluI GCNGC 7 cut(s) 26, 29, 113, 205, 229, 1056, 1096
GsaI CCCAGC 1 cut(s) 63
GsuI CTGGAG 1 cut(s) 244
HaeIII GGCC 3 cut(s) 119, 164, 1030
HapII CCGG 9 cut(s) 48, 54, 116, 139, 347, 485, 585, 1005, 1166
HgaI GACGC 2 cut(s) 17, 92
Hin1I GRCGYC 1 cut(s) 84
Hin1II CATG 7 cut(s) 111, 159, 311, 630, 788, 982, 1134
HincII GTYRAC 1 cut(s) 820
HindII GTYRAC 1 cut(s) 820
HinfI GANTC 9 cut(s) 68, 135, 425, 454, 470, 522, 533, 954, 997
HpaII CCGG 9 cut(s) 48, 54, 116, 139, 347, 485, 585, 1005, 1166
HphI GGTGA 3 cut(s) 599, 748, 949
Hpy166II GTNNAC 4 cut(s) 416, 688, 820, 881
Hpy188III TCNNGA 6 cut(s) 74, 97, 785, 889, 958, 979
Hpy8I GTNNAC 4 cut(s) 416, 688, 820, 881
Hpy99I CGWCG 2 cut(s) 86, 98
HpyAV CCTTC 5 cut(s) 504, 628, 937, 999, 1114
HpyCH4III ACNGT 2 cut(s) 281, 878
HpyCH4IV ACGT 1 cut(s) 1140
HpyF10VI GCNNNNNNNGC 2 cut(s) 161, 581
HpyF3I CTNAG 3 cut(s) 200, 498, 766
HpySE526I ACGT 1 cut(s) 1140
Hsp92I GRCGYC 1 cut(s) 84
Hsp92II CATG 7 cut(s) 111, 159, 311, 630, 788, 982, 1134
KpnI GGTACC 1 cut(s) 54
KroI GCCGGC 1 cut(s) 115
KroNI GCCGGC 1 cut(s) 117
KspI CCGCGG 1 cut(s) 362
Kzo9I GATC 7 cut(s) 99, 168, 175, 269, 355, 1009, 1090
LmnI GCTCC 2 cut(s) 68, 135
Lsp1109I GCAGC 7 cut(s) 12, 40, 99, 191, 240, 1067, 1082
LweI GCATC 1 cut(s) 216
MaeI CTAG 2 cut(s) 465, 915
MaeII ACGT 1 cut(s) 1140
MaeIII GTNAC 2 cut(s) 480, 1141
MalI GATC 7 cut(s) 101, 170, 177, 271, 357, 1011, 1092
MboI GATC 7 cut(s) 99, 168, 175, 269, 355, 1009, 1090
MfeI CAATTG 1 cut(s) 1150
MflI RGATCY 1 cut(s) 99
MhlI GDGCHC 1 cut(s) 504
MlyI GAGTC 2 cut(s) 77, 963
MmeI TCCRAC 1 cut(s) 826
MnlI CCTC 6 cut(s) 113, 209, 501, 624, 766, 1020
Mph1103I ATGCAT 1 cut(s) 1040
MroNI GCCGGC 1 cut(s) 115
MseI TTAA 6 cut(s) 246, 557, 614, 710, 866, 1199
MslI CAYNNNNRTG 1 cut(s) 312
MspA1I CMGCKG 2 cut(s) 204, 361
MspI CCGG 9 cut(s) 48, 54, 116, 139, 347, 485, 585, 1005, 1166
MspR9I CCNGG 2 cut(s) 967, 1005
MunI CAATTG 1 cut(s) 1150
Mva1269I GAATGC 1 cut(s) 794
MvaI CCWGG 1 cut(s) 967
MvnI CGCG 1 cut(s) 361
MwoI GCNNNNNNNGC 2 cut(s) 161, 581
NaeI GCCGGC 1 cut(s) 117
NciI CCSGG 1 cut(s) 1005
NdeII GATC 7 cut(s) 99, 168, 175, 269, 355, 1009, 1090
NgoMIV GCCGGC 1 cut(s) 115
NlaIII CATG 7 cut(s) 111, 159, 311, 630, 788, 982, 1134
NlaIV GGNNCC 5 cut(s) 52, 58, 319, 489, 883
NmeAIII GCCGAG 1 cut(s) 796
NsiI ATGCAT 1 cut(s) 1040
NspI RCATGY 1 cut(s) 1134
PagI TCATGA 2 cut(s) 784, 978
PceI AGGCCT 1 cut(s) 1030
PciI ACATGT 1 cut(s) 1130
PcsI WCGNNNNNNNCGW 1 cut(s) 90
PctI GAATGC 1 cut(s) 794
PdiI GCCGGC 1 cut(s) 117
PfeI GAWTC 7 cut(s) 135, 425, 454, 470, 522, 533, 997
PflFI GACNNNGTC 1 cut(s) 86
PfoI TCCNGGA 1 cut(s) 965
PkrI GCNGC 7 cut(s) 27, 30, 114, 206, 230, 1057, 1097
Ple19I CGATCG 1 cut(s) 1093
PleI GAGTC 2 cut(s) 76, 962
PpsI GAGTC 2 cut(s) 76, 962
PscI ACATGT 1 cut(s) 1130
Psp124BI GAGCTC 1 cut(s) 504
Psp1406I AACGTT 1 cut(s) 1140
Psp6I CCWGG 1 cut(s) 965
PspFI CCCAGC 1 cut(s) 59
PspGI CCWGG 1 cut(s) 965
PspN4I GGNNCC 5 cut(s) 52, 58, 319, 489, 883
PspPI GGNCC 4 cut(s) 56, 162, 317, 881
PstI CTGCAG 1 cut(s) 30
PstNI CAGNNNCTG 1 cut(s) 646
PsuI RGATCY 1 cut(s) 99
PsyI GACNNNGTC 1 cut(s) 86
PvuI CGATCG 1 cut(s) 1093
PvuII CAGCTG 1 cut(s) 204
RsaI GTAC 1 cut(s) 52
RsaNI GTAC 1 cut(s) 51
RseI CAYNNNNRTG 1 cut(s) 312
SacI GAGCTC 1 cut(s) 504
SacII CCGCGG 1 cut(s) 362
SaqAI TTAA 6 cut(s) 246, 557, 614, 710, 866, 1199
SatI GCNGC 7 cut(s) 26, 29, 113, 205, 229, 1056, 1096
Sau3AI GATC 7 cut(s) 99, 168, 175, 269, 355, 1009, 1090
Sau96I GGNCC 4 cut(s) 56, 162, 317, 881
SchI GAGTC 2 cut(s) 77, 963
ScrFI CCNGG 2 cut(s) 967, 1005
SduI GDGCHC 1 cut(s) 504
SfaNI GCATC 1 cut(s) 216
SfcI CTRYAG 1 cut(s) 26
Sfr303I CCGCGG 1 cut(s) 362
SgrBI CCGCGG 1 cut(s) 362
SinI GGWCC 3 cut(s) 56, 317, 881
SmiMI CAYNNNNRTG 1 cut(s) 312
SseBI AGGCCT 1 cut(s) 1030
SsiI CCGC 3 cut(s) 160, 359, 361
SspI AATATT 1 cut(s) 853
SspMI CTAG 2 cut(s) 465, 915
SstI GAGCTC 1 cut(s) 504
StuI AGGCCT 1 cut(s) 1030
StyD4I CCNGG 2 cut(s) 965, 1003
StyI CCWWGG 1 cut(s) 474
TaaI ACNGT 2 cut(s) 281, 878
TaiI ACGT 1 cut(s) 1143
TaqI TCGA 4 cut(s) 81, 96, 890, 957
TfiI GAWTC 7 cut(s) 135, 425, 454, 470, 522, 533, 997
Tru1I TTAA 6 cut(s) 246, 557, 614, 710, 866, 1199
Tru9I TTAA 6 cut(s) 246, 557, 614, 710, 866, 1199
TscAI CASTG 3 cut(s) 586, 881, 1213
TseI GCWGC 7 cut(s) 25, 28, 112, 204, 228, 1055, 1095
TspDTI ATGAA 7 cut(s) 175, 615, 729, 773, 956, 987, 995
TspRI CASTG 3 cut(s) 586, 881, 1213
Tth111I GACNNNGTC 1 cut(s) 86
VpaK11BI GGWCC 3 cut(s) 56, 317, 881
XagI CCTNNNNNAGG 1 cut(s) 245
XapI RAATTY 4 cut(s) 368, 655, 779, 859
XceI RCATGY 1 cut(s) 1134
XmiI GTMKAC 1 cut(s) 415
XspI CTAG 2 cut(s) 465, 915
Zsp2I ATGCAT 1 cut(s) 1040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.