RchiOBHm_Chr2g0154601

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000113
Physical Location & Seq
Reverse (-)
71711954 .. 71713603
1650 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52358

Sequence Viewer

Length: 1194 bp
ATGTCGGACGCTCTCTGCAGTCGGCGGCAGAAACAAGTAGTTCTCTCCGGTACCGCACCTAGCTCCGAGTCTGTTGATTTAGATGGTGTCATCGTCGACATCCTCTCACGTCTACCGGCCAAATCCCTGCTCCGATTCCGCTGTGTGTGCAAAGCATGGCGGGCATTGATCTCCGACCCTTATTTCATCAGAAAACACCTCAACTGCATCAACACCAAAATCAGTACCAGCTACTCTCTCCTTATCAGGTCTGAAATTTTCCGATCCGCAGAGTACGAAGCAATATTGAAGTGTTTGAGCCATGATGGTCCTCTTCCAAGCAGAAGGCTTGATTTTCCTGTACTTGATCGACTGGTTTGTATTTCTAAAATTTTAATAGTTGGCAGTTGCAATGGCTTGATATGTCTAATACTTGATTTTGTTACTGAAGAATCCTTTACCTTTATGATATGGAATCCTTGTACCGGAGAATACCAGGTCCTACCACAACCTCCCGTTCATGCCTCCCGCGGATGTTTTTTCGGGTTCGGTTATGATTCAACCAGTGATGACTACAAAGTAATAGTGGGTAGCTCTAGATATGAATTTGTTGTTGTCTTTATGCTAAAAAAGGGTTCATGGAGGAAGCTTGAAAGGCTCAACAGGTATTTCGAGGTGAATTGGCATGGGTGTTTAGTTAACGAAGCTCTGCATTGGGTATTGACGCAAGAGGAAGACGGTTGGTTAATCGCTCCAAGAATAGTGTCATTTGATTTAGGGGAGGAGAAATTTCATGAGATTCCATTCTCCTATCCTCCCGATGCAAATGACAGGCAGGGTTTATTTCCAGATGTTGGAATTCTTTGTAATTGCTTAACTCTAGAGTTTCAGACCATGTATGGCGGAGTTGACAGCAATATAAGCATATGGGTTATGAAGGACTATGGAGTCAAGGAATCTTGGACTGAAGTCCTAAACATCCCTCCAGAGGATTTGGATGAAGGTGAACTGTATACATGCATTGCATGCATTTCTGAGAATGGCGAGATTTTGATGCAGCTGGGAGTTACAGGCGCTTGCCCCATGGCATTATATAATCCGAGGGAGAAGACATATAGGATTGTCATGCACGATCATGATACCGTGGATTGTACTGCTCCTTATATAGAAACTTTAGTTTCACCATTAACTGGCAGTACTAGCGCATGCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

397

Amino Acids

44.86

Weight (kDa)

5.09

Isoelectric Point (pI)

47.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 30 - 64 8.5e-10 F-box domain
F-box-like PF12937 30 - 65 4.4e-09 F-box-like
FBA_1 PF07734 123 - 322 7.5e-20 F-box associated beta propeller domain
FBA_3 PF08268 125 - 370 4.7e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 926
Acc65I GGTACC 1 cut(s) 50
AccB1I GGYRCC 1 cut(s) 50
AccB7I CCANNNNNTGG 2 cut(s) 833, 1169
AccI GTMKAC 3 cut(s) 96, 112, 992
AccII CGCG 1 cut(s) 510
AciI CCGC 8 cut(s) 25, 54, 139, 160, 267, 508, 510, 882
AclWI GGATC 1 cut(s) 258
AcoI YGGCCR 1 cut(s) 117
AcsI RAATTY 5 cut(s) 255, 369, 584, 767, 837
AcuI CTGAAG 2 cut(s) 447, 966
AfaI GTAC 7 cut(s) 52, 226, 275, 342, 463, 1132, 1177
AfiI CCNNNNNNNGG 4 cut(s) 464, 833, 967, 1169
AgsI TTSAA 3 cut(s) 289, 540, 632
AjiI CACGTC 1 cut(s) 110
AjnI CCWGG 1 cut(s) 474
AluBI AGCT 6 cut(s) 63, 231, 573, 628, 686, 1039
AluI AGCT 6 cut(s) 63, 231, 573, 628, 686, 1039
AlwI GGATC 1 cut(s) 258
AoxI GGCC 1 cut(s) 117
ApeKI GCWGC 1 cut(s) 1036
ApoI RAATTY 5 cut(s) 255, 369, 584, 767, 837
Asp718I GGTACC 1 cut(s) 50
AspLEI GCGC 2 cut(s) 1055, 1184
AspS9I GGNCC 2 cut(s) 308, 478
AsuHPI GGTGA 3 cut(s) 667, 995, 1152
AvaII GGWCC 2 cut(s) 308, 478
BanI GGYRCC 1 cut(s) 50
BbsI GAAGAC 2 cut(s) 720, 1094
BbvI GCAGC 1 cut(s) 1048
BccI CCATC 2 cut(s) 77, 299
BciT130I CCWGG 1 cut(s) 476
BfaI CTAG 4 cut(s) 60, 576, 860, 1179
BfmI CTRYAG 1 cut(s) 16
BfoI RGCGCY 1 cut(s) 1056
BisI GCNGC 2 cut(s) 26, 1037
BlsI GCNGC 2 cut(s) 27, 1038
BmcAI AGTACT 1 cut(s) 1177
Bme1390I CCNGG 1 cut(s) 476
Bme18I GGWCC 2 cut(s) 308, 478
BmgBI CACGTC 1 cut(s) 110
BmgT120I GGNCC 2 cut(s) 308, 478
BmiI GGNNCC 1 cut(s) 52
BmrFI CCNGG 1 cut(s) 476
BmsI GCATC 3 cut(s) 216, 790, 1023
BoxI GACNNNNGTC 1 cut(s) 947
BpiI GAAGAC 2 cut(s) 720, 1094
BpmI CTGGAG 1 cut(s) 948
BsaJI CCNNGG 4 cut(s) 508, 1062, 1079, 1122
BsaWI WCCGGW 2 cut(s) 47, 464
Bsc4I CCNNNNNNNGG 4 cut(s) 464, 833, 967, 1169
Bse118I RCCGGY 1 cut(s) 115
Bse1I ACTGG 3 cut(s) 357, 543, 1174
Bse3DI GCAATG 2 cut(s) 397, 999
BseBI CCWGG 1 cut(s) 476
BseDI CCNNGG 4 cut(s) 508, 1062, 1079, 1122
BseGI GGATG 4 cut(s) 99, 518, 957, 982
BseLI CCNNNNNNNGG 4 cut(s) 464, 833, 967, 1169
BseMI GCAATG 2 cut(s) 397, 999
BseMII CTCAG 1 cut(s) 1005
BseNI ACTGG 3 cut(s) 357, 543, 1174
BseRI GAGGAG 1 cut(s) 776
BseXI GCAGC 1 cut(s) 1048
BseYI CCCAGC 1 cut(s) 1039
Bsh1236I CGCG 1 cut(s) 510
BshFI GGCC 1 cut(s) 119
BshNI GGYRCC 1 cut(s) 50
BsiSI CCGG 3 cut(s) 48, 116, 465
BslI CCNNNNNNNGG 4 cut(s) 464, 833, 967, 1169
BsnI GGCC 1 cut(s) 119
Bsp143I GATC 4 cut(s) 168, 263, 346, 1111
Bsp19I CCATGG 1 cut(s) 1062
BspACI CCGC 8 cut(s) 25, 54, 139, 160, 267, 508, 510, 882
BspANI GGCC 1 cut(s) 119
BspCNI CTCAG 1 cut(s) 1006
BspFNI CGCG 1 cut(s) 510
BspHI TCATGA 2 cut(s) 772, 1114
BspLI GGNNCC 1 cut(s) 52
BspMAI CTGCAG 1 cut(s) 20
BspPI GGATC 1 cut(s) 258
BspT107I GGYRCC 1 cut(s) 50
BsrDI GCAATG 2 cut(s) 397, 999
BsrFI RCCGGY 1 cut(s) 115
BsrI ACTGG 3 cut(s) 357, 543, 1174
BssAI RCCGGY 1 cut(s) 115
BssECI CCNNGG 4 cut(s) 508, 1062, 1079, 1122
BssMI GATC 4 cut(s) 168, 263, 346, 1111
BssNAI GTATAC 1 cut(s) 993
BssT1I CCWWGG 1 cut(s) 1062
Bst1107I GTATAC 1 cut(s) 993
Bst2UI CCWGG 1 cut(s) 476
Bst4CI ACNGT 3 cut(s) 719, 990, 1123
Bst6I CTCTTC 1 cut(s) 318
BstAPI GCANNNNNTGC 1 cut(s) 1005
BstC8I GCNNGC 4 cut(s) 162, 1006, 1057, 1186
BstDEI CTNAG 1 cut(s) 1014
BstDSI CCRYGG 3 cut(s) 508, 1062, 1122
BstF5I GGATG 4 cut(s) 99, 518, 957, 982
BstFNI CGCG 1 cut(s) 510
BstH2I RGCGCY 1 cut(s) 1056
BstHHI GCGC 2 cut(s) 1055, 1184
BstKTI GATC 4 cut(s) 171, 266, 349, 1114
BstMBI GATC 4 cut(s) 168, 263, 346, 1111
BstMWI GCNNNNNNNGC 6 cut(s) 147, 161, 634, 900, 1005, 1179
BstNI CCWGG 1 cut(s) 476
BstNSI RCATGY 3 cut(s) 999, 1008, 1188
BstPAI GACNNNNGTC 1 cut(s) 947
BstSCI CCNGG 1 cut(s) 474
BstSFI CTRYAG 1 cut(s) 16
BstUI CGCG 1 cut(s) 510
BstV1I GCAGC 1 cut(s) 1048
BstV2I GAAGAC 2 cut(s) 720, 1094
BstZ17I GTATAC 1 cut(s) 993
BsuRI GGCC 1 cut(s) 119
BtgI CCRYGG 3 cut(s) 508, 1062, 1122
BtrI CACGTC 1 cut(s) 110
BtsCI GGATG 4 cut(s) 99, 518, 957, 982
BtsIMutI CAGTG 1 cut(s) 550
Cac8I GCNNGC 4 cut(s) 162, 1006, 1057, 1186
CciI TCATGA 2 cut(s) 772, 1114
CfoI GCGC 2 cut(s) 1055, 1184
Cfr10I RCCGGY 1 cut(s) 115
Cfr13I GGNCC 2 cut(s) 308, 478
Cfr42I CCGCGG 1 cut(s) 511
CseI GACGC 2 cut(s) 17, 712
CsiI ACCWGGT 1 cut(s) 474
Csp6I GTAC 7 cut(s) 51, 225, 274, 341, 462, 1131, 1176
CviQI GTAC 7 cut(s) 51, 225, 274, 341, 462, 1131, 1176
DdeI CTNAG 1 cut(s) 1014
DpnI GATC 4 cut(s) 170, 265, 348, 1113
DpnII GATC 4 cut(s) 168, 263, 346, 1111
DrdI GACNNNNNNGTC 1 cut(s) 926
DseDI GACNNNNNNGTC 1 cut(s) 926
EaeI YGGCCR 1 cut(s) 117
Eam1104I CTCTTC 1 cut(s) 318
EarI CTCTTC 1 cut(s) 318
EciI GGCGGA 1 cut(s) 897
Eco130I CCWWGG 1 cut(s) 1062
Eco47I GGWCC 2 cut(s) 308, 478
Eco57I CTGAAG 2 cut(s) 447, 966
EcoO109I RGGNCCY 1 cut(s) 478
EcoRI GAATTC 1 cut(s) 837
EcoRII CCWGG 1 cut(s) 474
EcoT14I CCWWGG 1 cut(s) 1062
EcoT22I ATGCAT 2 cut(s) 1001, 1010
ErhI CCWWGG 1 cut(s) 1062
FauI CCCGC 2 cut(s) 153, 515
FauNDI CATATG 1 cut(s) 905
FblI GTMKAC 3 cut(s) 96, 112, 992
Fnu4HI GCNGC 2 cut(s) 26, 1037
FokI GGATG 4 cut(s) 86, 525, 944, 989
Fsp4HI GCNGC 2 cut(s) 26, 1037
FspBI CTAG 4 cut(s) 60, 576, 860, 1179
GlaI GCGC 2 cut(s) 1054, 1183
GluI GCNGC 2 cut(s) 26, 1037
GsaI CCCAGC 1 cut(s) 1043
GsuI CTGGAG 1 cut(s) 948
HaeII RGCGCY 1 cut(s) 1056
HaeIII GGCC 1 cut(s) 119
HapII CCGG 3 cut(s) 48, 116, 465
HgaI GACGC 2 cut(s) 17, 712
HhaI GCGC 2 cut(s) 1055, 1184
Hin6I GCGC 2 cut(s) 1053, 1182
HinP1I GCGC 2 cut(s) 1053, 1182
HincII GTYRAC 3 cut(s) 97, 679, 889
HindII GTYRAC 3 cut(s) 97, 679, 889
HindIII AAGCTT 1 cut(s) 626
HinfI GANTC 8 cut(s) 68, 135, 431, 454, 536, 778, 927, 935
HpaI GTTAAC 1 cut(s) 679
HpaII CCGG 3 cut(s) 48, 116, 465
HphI GGTGA 3 cut(s) 667, 995, 1152
Hpy166II GTNNAC 6 cut(s) 97, 113, 679, 889, 986, 993
Hpy188III TCNNGA 7 cut(s) 576, 773, 797, 827, 860, 965, 1115
Hpy8I GTNNAC 6 cut(s) 97, 113, 679, 889, 986, 993
Hpy99I CGWCG 1 cut(s) 98
HpyAV CCTTC 3 cut(s) 318, 910, 974
HpyCH4III ACNGT 3 cut(s) 719, 990, 1123
HpyCH4IV ACGT 1 cut(s) 109
HpyF10VI GCNNNNNNNGC 6 cut(s) 147, 161, 634, 900, 1005, 1179
HpyF3I CTNAG 1 cut(s) 1014
HpySE526I ACGT 1 cut(s) 109
HspAI GCGC 2 cut(s) 1053, 1182
KpnI GGTACC 1 cut(s) 54
KspAI GTTAAC 1 cut(s) 679
KspI CCGCGG 1 cut(s) 511
Kzo9I GATC 4 cut(s) 168, 263, 346, 1111
LmnI GCTCC 4 cut(s) 68, 135, 736, 1141
Lsp1109I GCAGC 1 cut(s) 1048
LweI GCATC 3 cut(s) 216, 790, 1023
MabI ACCWGGT 1 cut(s) 474
MaeI CTAG 4 cut(s) 60, 576, 860, 1179
MaeII ACGT 1 cut(s) 109
MaeIII GTNAC 2 cut(s) 421, 1045
MalI GATC 4 cut(s) 170, 265, 348, 1113
MboI GATC 4 cut(s) 168, 263, 346, 1111
MboII GAAGA 4 cut(s) 305, 440, 725, 1099
MluCI AATT 7 cut(s) 255, 369, 584, 658, 767, 837, 847
MlyI GAGTC 2 cut(s) 77, 936
MmeI TCCRAC 2 cut(s) 198, 814
Mph1103I ATGCAT 2 cut(s) 1001, 1010
MseI TTAA 5 cut(s) 374, 678, 725, 854, 1166
MslI CAYNNNNRTG 2 cut(s) 1113, 1189
MspA1I CMGCKG 3 cut(s) 141, 510, 1039
MspI CCGG 3 cut(s) 48, 116, 465
MspR9I CCNGG 1 cut(s) 476
MvaI CCWGG 1 cut(s) 476
MvnI CGCG 1 cut(s) 510
MwoI GCNNNNNNNGC 6 cut(s) 147, 161, 634, 900, 1005, 1179
NcoI CCATGG 1 cut(s) 1062
NdeI CATATG 1 cut(s) 905
NdeII GATC 4 cut(s) 168, 263, 346, 1111
NlaIV GGNNCC 1 cut(s) 52
NsiI ATGCAT 2 cut(s) 1001, 1010
NspI RCATGY 3 cut(s) 999, 1008, 1188
PaeI GCATGC 2 cut(s) 1008, 1188
PagI TCATGA 2 cut(s) 772, 1114
PfeI GAWTC 6 cut(s) 135, 431, 454, 536, 778, 935
PflMI CCANNNNNTGG 2 cut(s) 833, 1169
PkrI GCNGC 2 cut(s) 27, 1038
PleI GAGTC 2 cut(s) 76, 935
PpsI GAGTC 2 cut(s) 76, 935
PpuMI RGGWCCY 1 cut(s) 478
PshAI GACNNNNGTC 1 cut(s) 947
Psp5II RGGWCCY 1 cut(s) 478
Psp6I CCWGG 1 cut(s) 474
PspFI CCCAGC 1 cut(s) 1039
PspGI CCWGG 1 cut(s) 474
PspN4I GGNNCC 1 cut(s) 52
PspPI GGNCC 2 cut(s) 308, 478
PspPPI RGGWCCY 1 cut(s) 478
PstI CTGCAG 1 cut(s) 20
PvuII CAGCTG 1 cut(s) 1039
RsaI GTAC 7 cut(s) 52, 226, 275, 342, 463, 1132, 1177
RsaNI GTAC 7 cut(s) 51, 225, 274, 341, 462, 1131, 1176
RseI CAYNNNNRTG 2 cut(s) 1113, 1189
SacII CCGCGG 1 cut(s) 511
SalI GTCGAC 1 cut(s) 95
SaqAI TTAA 5 cut(s) 374, 678, 725, 854, 1166
SatI GCNGC 2 cut(s) 26, 1037
Sau3AI GATC 4 cut(s) 168, 263, 346, 1111
Sau96I GGNCC 2 cut(s) 308, 478
ScaI AGTACT 1 cut(s) 1177
SchI GAGTC 2 cut(s) 77, 936
ScrFI CCNGG 1 cut(s) 476
SexAI ACCWGGT 1 cut(s) 474
SfaNI GCATC 3 cut(s) 216, 790, 1023
SfcI CTRYAG 1 cut(s) 16
Sfr303I CCGCGG 1 cut(s) 511
SgrBI CCGCGG 1 cut(s) 511
SinI GGWCC 2 cut(s) 308, 478
SmiMI CAYNNNNRTG 2 cut(s) 1113, 1189
SphI GCATGC 2 cut(s) 1008, 1188
Sse9I AATT 7 cut(s) 255, 369, 584, 658, 767, 837, 847
SsiI CCGC 8 cut(s) 25, 54, 139, 160, 267, 508, 510, 882
SspI AATATT 1 cut(s) 285
SspMI CTAG 4 cut(s) 60, 576, 860, 1179
StyD4I CCNGG 1 cut(s) 474
StyI CCWWGG 1 cut(s) 1062
TaaI ACNGT 3 cut(s) 719, 990, 1123
TaiI ACGT 1 cut(s) 112
TaqI TCGA 3 cut(s) 96, 349, 651
TasI AATT 7 cut(s) 255, 369, 584, 658, 767, 837, 847
TatI WGTACW 3 cut(s) 340, 1130, 1175
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 6 cut(s) 135, 431, 454, 536, 778, 935
Tru1I TTAA 5 cut(s) 374, 678, 725, 854, 1166
Tru9I TTAA 5 cut(s) 374, 678, 725, 854, 1166
TscAI CASTG 1 cut(s) 550
TseI GCWGC 1 cut(s) 1036
TspDTI ATGAA 7 cut(s) 175, 488, 597, 606, 761, 929, 993
TspRI CASTG 1 cut(s) 550
Van91I CCANNNNNTGG 2 cut(s) 833, 1169
VpaK11BI GGWCC 2 cut(s) 308, 478
XapI RAATTY 5 cut(s) 255, 369, 584, 767, 837
XbaI TCTAGA 2 cut(s) 575, 859
XceI RCATGY 3 cut(s) 999, 1008, 1188
XmiI GTMKAC 3 cut(s) 96, 112, 992
XspI CTAG 4 cut(s) 60, 576, 860, 1179
ZrmI AGTACT 1 cut(s) 1177
Zsp2I ATGCAT 2 cut(s) 1001, 1010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.