Rroxscaffold_4G00307880

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000113
Physical Location & Seq
Forward (+)
29354130 .. 29355335
1206 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00307880.1

Sequence Viewer

Length: 1206 bp
ATGGCGGACGACGGCGGCGTTCACAAGCGAGCTCTTACCAGTGTCGCCGATCTCGACGGCGTCCTTGATGAGATACTGGCAAGGCTACCGGTCAAATCACTGATGCGATTTTGCTGCGTTTGCAAGTCATGGCGTGCTCTCATCTCCCAGTCTCATTTTGTCGCCAAGCACTTCGACTACGCAAGCAAAGGCTTCACCGAGAACACCTCCGGTCTCTTGATATCAATGAGTCCTCTCAAATACCGAGACTGTGAAGCAACCAAGGATTTGTCCCTAGACTGTGAAGCATTGAAGGACTTGAAGGATGATGGAGATGCTCATCTTGCAATTAGAAAGCTCGAGTTTCCGGTAATTTTCCCCAATTCCAGCCGTAGAAAAATTGTGGGTTCTTGCAATGGGCTGATTTGTGTAGAAATTGACGAGAAAGACATGGTGTTATGGAACCCTTGTACTGGACAATCCAATTTGTTGCCAAAACCTACTGGTCATGTCACTTTGAAGCTTTGCGGAGATGGTTATGATCTTACTACGAAGTTTTGGGGATTTGGTTATGATTCCACTAATGATGATTACAAGGTAGTGAGAGGGTACAATTATAGAGTTAGTGGTTCTGAGGAAACCGTGGTTCAGGTCTTTAGTTTAAAATCAGGTTCATGGAGGACCCATAAGGGTCTTAGTTACTTTTGCTTGGAAGGGCCAGGGTGCTTGTTAAATGGTGCTCTGCATTGGGCATTGACCATATTCTATGATTTTCGTCCAACAGATTCAAGGACTATCTCTTTTGATTTAGCAGAGGAAAAGTTTCAGGAGATGATTCCATTGCCCTCTCAGGCTGGTTTTAGATACAGCTTTATTCCTGGAGATTGTCGTGGTGTATATACATATGGCTTTCTACACAATGAGATCATCAGGCTTAGAATATGGGTGATGAAGGAATATGGGGTCCAGGATTCGTGGACTGAAGTTGCTTCATTTGATATTTTACGTGAAGATTGTCAATTCTCACTCATGACGCCTCTGTGCATATTAGAGAATGGTGAAGGTTTTATCGCCGAGAGTTGTGATTTTCAGTCCTTGGTATTATATAGCTTCAAGGAACAGACATTTAGGAATGTTGTTAGGGCCGACAACAAATGCCAATTTGGTGCAGTCGTTTACAGGGAGACTTTAGTTTCACCAGTCACCAGTGGTATTGCAGACATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

401

Amino Acids

45.18

Weight (kDa)

5.48

Isoelectric Point (pI)

33.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 21 - 53 1.2e-08 F-box domain
F-box-like PF12937 21 - 51 1e-05 F-box-like
FBA_3 PF08268 115 - 374 1.2e-21 F-box associated beta propeller domain
FBA_1 PF07734 126 - 372 1.2e-25 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 5, 15, 507
AcuI CTGAAG 1 cut(s) 981
AcyI GRCGYC 2 cut(s) 60, 1013
AfaI GTAC 2 cut(s) 451, 590
AfiI CCNNNNNNNGG 1 cut(s) 452
AgeI ACCGGT 1 cut(s) 88
AgsI TTSAA 5 cut(s) 292, 301, 499, 768, 1093
AjnI CCWGG 3 cut(s) 697, 856, 945
AluBI AGCT 5 cut(s) 32, 337, 502, 849, 1089
AluI AGCT 5 cut(s) 32, 337, 502, 849, 1089
Alw21I GWGCWC 3 cut(s) 34, 139, 721
Alw26I GTCTC 4 cut(s) 156, 218, 240, 1157
Ama87I CYCGRG 1 cut(s) 338
AoxI GGCC 2 cut(s) 695, 1122
ApeKI GCWGC 1 cut(s) 114
AsiGI ACCGGT 1 cut(s) 88
Asp700I GAANNNNTTC 1 cut(s) 801
AspS9I GGNCC 4 cut(s) 660, 695, 943, 1122
AsuHPI GGTGA 5 cut(s) 187, 937, 1049, 1167, 1174
AvaI CYCGRG 1 cut(s) 338
AvaII GGWCC 2 cut(s) 660, 943
BanII GRGCYC 1 cut(s) 34
Bbv12I GWGCWC 3 cut(s) 34, 139, 721
BbvI GCAGC 1 cut(s) 101
BccI CCATC 2 cut(s) 302, 506
BceAI ACGGC 3 cut(s) 28, 73, 354
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BciT130I CCWGG 3 cut(s) 699, 858, 947
BcoDI GTCTC 4 cut(s) 156, 218, 240, 1157
BfaI CTAG 1 cut(s) 275
BisI GCNGC 2 cut(s) 16, 115
BlsI GCNGC 2 cut(s) 17, 116
Bme1390I CCNGG 3 cut(s) 699, 858, 947
Bme18I GGWCC 2 cut(s) 660, 943
BmeT110I CYCGRG 1 cut(s) 338
BmgT120I GGNCC 4 cut(s) 660, 695, 943, 1122
BmiI GGNNCC 3 cut(s) 443, 662, 944
BmrFI CCNGG 3 cut(s) 699, 858, 947
BmrI ACTGGG 1 cut(s) 142
BmsI GCATC 2 cut(s) 93, 304
BmuI ACTGGG 1 cut(s) 142
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpmI CTGGAG 1 cut(s) 879
BsaAI YACGTR 1 cut(s) 986
BsaBI GATNNNNATC 1 cut(s) 318
BsaHI GRCGYC 2 cut(s) 60, 1013
BsaI GGTCTC 1 cut(s) 218
BsaJI CCNNGG 4 cut(s) 261, 621, 698, 1074
BsaWI WCCGGW 3 cut(s) 88, 209, 346
Bsc4I CCNNNNNNNGG 1 cut(s) 452
Bse118I RCCGGY 1 cut(s) 88
Bse1I ACTGG 7 cut(s) 39, 81, 148, 457, 487, 1178, 1185
Bse3DI GCAATG 2 cut(s) 400, 818
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 3 cut(s) 699, 858, 947
BseDI CCNNGG 4 cut(s) 261, 621, 698, 1074
BseGI GGATG 1 cut(s) 310
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 1 cut(s) 452
BseMI GCAATG 2 cut(s) 400, 818
BseMII CTCAG 2 cut(s) 603, 842
BseNI ACTGG 7 cut(s) 39, 81, 148, 457, 487, 1178, 1185
BseXI GCAGC 1 cut(s) 101
BsgI GTGCAG 1 cut(s) 1167
BshFI GGCC 2 cut(s) 697, 1124
BshTI ACCGGT 1 cut(s) 88
BsiHKAI GWGCWC 3 cut(s) 34, 139, 721
BsiHKCI CYCGRG 1 cut(s) 338
BsiSI CCGG 3 cut(s) 89, 210, 347
BslFI GGGAC 1 cut(s) 256
BslI CCNNNNNNNGG 1 cut(s) 452
BsmAI GTCTC 4 cut(s) 156, 218, 240, 1157
BsmFI GGGAC 1 cut(s) 256
BsnI GGCC 2 cut(s) 697, 1124
Bso31I GGTCTC 1 cut(s) 218
BsoBI CYCGRG 1 cut(s) 338
Bsp1286I GDGCHC 3 cut(s) 34, 139, 721
Bsp143I GATC 3 cut(s) 49, 520, 903
BspACI CCGC 3 cut(s) 5, 15, 507
BspANI GGCC 2 cut(s) 697, 1124
BspCNI CTCAG 2 cut(s) 604, 841
BspHI TCATGA 1 cut(s) 1008
BspLI GGNNCC 3 cut(s) 443, 662, 944
BspTNI GGTCTC 1 cut(s) 218
BsrDI GCAATG 2 cut(s) 400, 818
BsrFI RCCGGY 1 cut(s) 88
BsrI ACTGG 7 cut(s) 39, 81, 148, 457, 487, 1178, 1185
BssAI RCCGGY 1 cut(s) 88
BssECI CCNNGG 4 cut(s) 261, 621, 698, 1074
BssMI GATC 3 cut(s) 49, 520, 903
BssNI GRCGYC 2 cut(s) 60, 1013
BssT1I CCWWGG 2 cut(s) 261, 1074
Bst2UI CCWGG 3 cut(s) 699, 858, 947
Bst4CI ACNGT 3 cut(s) 251, 281, 622
BstACI GRCGYC 2 cut(s) 60, 1013
BstBAI YACGTR 1 cut(s) 986
BstC8I GCNNGC 3 cut(s) 30, 135, 184
BstDEI CTNAG 4 cut(s) 612, 674, 828, 914
BstDSI CCRYGG 1 cut(s) 621
BstF5I GGATG 1 cut(s) 310
BstKTI GATC 3 cut(s) 52, 523, 906
BstMAI GTCTC 4 cut(s) 156, 218, 240, 1157
BstMBI GATC 3 cut(s) 49, 520, 903
BstMWI GCNNNNNNNGC 2 cut(s) 120, 323
BstNI CCWGG 3 cut(s) 699, 858, 947
BstSCI CCNGG 3 cut(s) 697, 856, 945
BstV1I GCAGC 1 cut(s) 101
BsuRI GGCC 2 cut(s) 697, 1124
BtgI CCRYGG 1 cut(s) 621
BtsCI GGATG 1 cut(s) 310
BtsIMutI CAGTG 3 cut(s) 46, 98, 1192
Cac8I GCNNGC 3 cut(s) 30, 135, 184
CciI TCATGA 1 cut(s) 1008
Cfr10I RCCGGY 1 cut(s) 88
Cfr13I GGNCC 4 cut(s) 660, 695, 943, 1122
CseI GACGC 2 cut(s) 49, 1021
Csp6I GTAC 2 cut(s) 450, 589
CspAI ACCGGT 1 cut(s) 88
CviAII CATG 5 cut(s) 129, 430, 488, 654, 1009
CviQI GTAC 2 cut(s) 450, 589
DdeI CTNAG 4 cut(s) 612, 674, 828, 914
DpnI GATC 3 cut(s) 51, 522, 905
DpnII GATC 3 cut(s) 49, 520, 903
DraI TTTAAA 1 cut(s) 642
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 32
Eco130I CCWWGG 2 cut(s) 261, 1074
Eco24I GRGCYC 1 cut(s) 34
Eco31I GGTCTC 1 cut(s) 218
Eco32I GATATC 1 cut(s) 222
Eco47I GGWCC 2 cut(s) 660, 943
Eco53kI GAGCTC 1 cut(s) 32
Eco57I CTGAAG 1 cut(s) 981
Eco88I CYCGRG 1 cut(s) 338
EcoICRI GAGCTC 1 cut(s) 32
EcoO109I RGGNCCY 1 cut(s) 660
EcoRII CCWGG 3 cut(s) 697, 856, 945
EcoRV GATATC 1 cut(s) 222
EcoT14I CCWWGG 2 cut(s) 261, 1074
EcoT38I GRGCYC 1 cut(s) 34
ErhI CCWWGG 2 cut(s) 261, 1074
FaeI CATG 5 cut(s) 132, 433, 491, 657, 1012
FaqI GGGAC 1 cut(s) 256
FatI CATG 5 cut(s) 128, 429, 487, 653, 1008
FauNDI CATATG 1 cut(s) 883
Fnu4HI GCNGC 2 cut(s) 16, 115
FokI GGATG 1 cut(s) 317
FriOI GRGCYC 1 cut(s) 34
Fsp4HI GCNGC 2 cut(s) 16, 115
FspBI CTAG 1 cut(s) 275
GluI GCNGC 2 cut(s) 16, 115
GsuI CTGGAG 1 cut(s) 879
HaeIII GGCC 2 cut(s) 697, 1124
HapII CCGG 3 cut(s) 89, 210, 347
HgaI GACGC 2 cut(s) 49, 1021
Hin1I GRCGYC 2 cut(s) 60, 1013
Hin1II CATG 5 cut(s) 132, 433, 491, 657, 1012
HindIII AAGCTT 1 cut(s) 500
HinfI GANTC 5 cut(s) 229, 554, 764, 814, 950
HpaII CCGG 3 cut(s) 89, 210, 347
HphI GGTGA 5 cut(s) 187, 937, 1049, 1167, 1174
Hpy166II GTNNAC 3 cut(s) 22, 957, 1156
Hpy188I TCNGA 1 cut(s) 613
Hpy188III TCNNGA 4 cut(s) 53, 217, 806, 1009
Hpy8I GTNNAC 3 cut(s) 22, 957, 1156
Hpy99I CGWCG 2 cut(s) 14, 59
HpyAV CCTTC 5 cut(s) 286, 295, 686, 925, 1034
HpyCH4III ACNGT 3 cut(s) 251, 281, 622
HpyCH4IV ACGT 1 cut(s) 985
HpyCH4V TGCA 7 cut(s) 123, 326, 393, 724, 1023, 1148, 1196
HpyF10VI GCNNNNNNNGC 2 cut(s) 120, 323
HpyF3I CTNAG 4 cut(s) 612, 674, 828, 914
HpySE526I ACGT 1 cut(s) 985
Hsp92I GRCGYC 2 cut(s) 60, 1013
Hsp92II CATG 5 cut(s) 132, 433, 491, 657, 1012
Kzo9I GATC 3 cut(s) 49, 520, 903
Lsp1109I GCAGC 1 cut(s) 101
LweI GCATC 2 cut(s) 93, 304
MaeI CTAG 1 cut(s) 275
MaeII ACGT 1 cut(s) 985
MaeIII GTNAC 3 cut(s) 490, 677, 1180
MalI GATC 3 cut(s) 51, 522, 905
MboI GATC 3 cut(s) 49, 520, 903
MboII GAAGA 1 cut(s) 1001
MhlI GDGCHC 3 cut(s) 34, 139, 721
MluCI AATT 9 cut(s) 327, 351, 361, 378, 414, 463, 592, 998, 1139
MlyI GAGTC 1 cut(s) 238
MmeI TCCRAC 1 cut(s) 782
MnlI CCTC 8 cut(s) 217, 243, 578, 607, 651, 787, 835, 1026
MroXI GAANNNNTTC 1 cut(s) 801
MseI TTAA 2 cut(s) 641, 710
MspI CCGG 3 cut(s) 89, 210, 347
MspR9I CCNGG 3 cut(s) 699, 858, 947
MvaI CCWGG 3 cut(s) 699, 858, 947
MwoI GCNNNNNNNGC 2 cut(s) 120, 323
NdeI CATATG 1 cut(s) 883
NdeII GATC 3 cut(s) 49, 520, 903
NlaIII CATG 5 cut(s) 132, 433, 491, 657, 1012
NlaIV GGNNCC 3 cut(s) 443, 662, 944
NmeAIII GCCGAG 1 cut(s) 1078
NmuCI GTSAC 2 cut(s) 490, 1180
PaeR7I CTCGAG 1 cut(s) 338
PagI TCATGA 1 cut(s) 1008
PcsI WCGNNNNNNNCGW 2 cut(s) 15, 51
PdmI GAANNNNTTC 1 cut(s) 801
PfeI GAWTC 4 cut(s) 554, 764, 814, 950
PflFI GACNNNGTC 1 cut(s) 59
PfoI TCCNGGA 2 cut(s) 856, 945
PinAI ACCGGT 1 cut(s) 88
PkrI GCNGC 2 cut(s) 17, 116
PleI GAGTC 1 cut(s) 237
PpsI GAGTC 1 cut(s) 237
Ppu21I YACGTR 1 cut(s) 986
PpuMI RGGWCCY 1 cut(s) 660
Psp124BI GAGCTC 1 cut(s) 34
Psp5II RGGWCCY 1 cut(s) 660
Psp6I CCWGG 3 cut(s) 697, 856, 945
PspGI CCWGG 3 cut(s) 697, 856, 945
PspN4I GGNNCC 3 cut(s) 443, 662, 944
PspPI GGNCC 4 cut(s) 660, 695, 943, 1122
PspPPI RGGWCCY 1 cut(s) 660
PspXI VCTCGAGB 1 cut(s) 338
PsyI GACNNNGTC 1 cut(s) 59
RsaI GTAC 2 cut(s) 451, 590
RsaNI GTAC 2 cut(s) 450, 589
SacI GAGCTC 1 cut(s) 34
SaqAI TTAA 2 cut(s) 641, 710
SatI GCNGC 2 cut(s) 16, 115
Sau3AI GATC 3 cut(s) 49, 520, 903
Sau96I GGNCC 4 cut(s) 660, 695, 943, 1122
SchI GAGTC 1 cut(s) 238
ScrFI CCNGG 3 cut(s) 699, 858, 947
SduI GDGCHC 3 cut(s) 34, 139, 721
SfaNI GCATC 2 cut(s) 93, 304
Sfr274I CTCGAG 1 cut(s) 338
SinI GGWCC 2 cut(s) 660, 943
SlaI CTCGAG 1 cut(s) 338
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
Sse9I AATT 9 cut(s) 327, 351, 361, 378, 414, 463, 592, 998, 1139
SsiI CCGC 3 cut(s) 5, 15, 507
SspMI CTAG 1 cut(s) 275
SstI GAGCTC 1 cut(s) 34
StyD4I CCNGG 3 cut(s) 697, 856, 945
StyI CCWWGG 2 cut(s) 261, 1074
TaaI ACNGT 3 cut(s) 251, 281, 622
TaiI ACGT 1 cut(s) 988
TaqI TCGA 3 cut(s) 54, 174, 339
TasI AATT 9 cut(s) 327, 351, 361, 378, 414, 463, 592, 998, 1139
TatI WGTACW 1 cut(s) 449
TauI GCSGC 1 cut(s) 18
TfiI GAWTC 4 cut(s) 554, 764, 814, 950
Tru1I TTAA 2 cut(s) 641, 710
Tru9I TTAA 2 cut(s) 641, 710
TscAI CASTG 3 cut(s) 46, 105, 1192
TseFI GTSAC 2 cut(s) 490, 1180
TseI GCWGC 1 cut(s) 114
Tsp45I GTSAC 2 cut(s) 490, 1180
TspDTI ATGAA 3 cut(s) 642, 944, 960
TspRI CASTG 3 cut(s) 46, 105, 1192
Tth111I GACNNNGTC 1 cut(s) 59
VpaK11BI GGWCC 2 cut(s) 660, 943
XhoI CTCGAG 1 cut(s) 338
XmnI GAANNNNTTC 1 cut(s) 801
XspI CTAG 1 cut(s) 275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.