Rroxscaffold_4G00307910

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000113
Physical Location & Seq
Forward (+)
29387860 .. 29459859
72000 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00307910.1

Sequence Viewer

Length: 1290 bp
ATGGCCACCAATTCCATGGCGGACGACGACGGCGTTCACAAGCGAGCTCTTACCAGTGTCGCCGACCTCGACGGCGTCCTTGATGAGATACTGGCAAGGCTACCGGTCAAATCACTGATGCGATTTCGCTGCGTCTGCAAGTCATGGCGTGCTCTCATCTCCCAGTCTCGTTTTGTCACCAAGCACTTCAACTACGCAAGCAAAGGCTTCACCGAGAACACCTCCAGGCTCTTGATATCAATGAGTCCTCTCCAATCCCGAGACTGTGAAGCATCCAAGGACTTATCCCTAGACTGTGAGGCATTGAAGGAGTTGAAGGATGATGGAGATGCTCATCTTGCAATTGGAAAGCTCGAGTTTCCGGTAATGTTCCCTAATTCCAGTCGTAGAAATATTGTGGGTTCTTGCAATGGGCTGATTTGTGTAGAAATAGACCATAAAGACATGGTGTTATGGAACCCTTGTACTGGACAATCCAATTTGTTGCCAAAACCTACTGGTCATGTCACTTCGAAGCTTTGCGGAGTTGGTTATGATCTCACTATGAAGTTTTGCGGATTTGGTTATGATTCCACTAATGATGATTATAAGGTAGTGAGAGGGTACAATCATATAGTTAGGGGTTCTGAGGAAACCATGGTTCAGGTCTTTAGTTTAAAATCAGGTTCATGGAGGACCCATGAGGGTCTCGGTTACTTTTGCTTGGCAGGGCCGGCGTGCTTGTTAAATGGTGCTCTGCATTGGCAAGGGACCATATTTGATGATTTTCATCCAAGAGATTCAAGGGTTATCTCTTTTGATTTAGCAGAGGAAAAGTTTCGGGAGATGCTTCCATTGCCCTCTCTGGTAGGGTTTAGATGCGACTTTATTCCTGGAGATTGTCTTGGTGTATATGAATATAGCATTCTACACGATGAGATCTTCAGGTTTAGAATATGGATGATGAAGGAATATGGGGTCAAGGAATCGTGGACTGAAGTTGCTTCTTTTGATTTACCAAAAGATTATAAATTCTCACTCGTGACGCCTCTGTGCATATTAGAGAATGGTGAAGGTTTGATCGCCAGTAGATATGATTTTCAGTCCTTGGTATTCTATAGCTTCAAGGAGCAGACATTTAGGAATGTTTTTAGGACCCACAACAGATGGAAATTTGATGGACTCATTTACAGGGAGACTTTAGTTTCACCAGTCACCAGTGGTATTGCAGACATCTCTAAGATCAACACTATTTGTGGGGAGCTAATTTGTGAGCACCATGATGCCCAAGGAAATCTCCAAAATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

429

Amino Acids

48.58

Weight (kDa)

5.93

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 26 - 58 2.6e-09 F-box domain
F-box-like PF12937 26 - 57 7.8e-06 F-box-like
FBA_3 PF08268 119 - 376 3.8e-21 F-box associated beta propeller domain
FBA_1 PF07734 131 - 376 2.9e-26 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 588, 1008
AciI CCGC 3 cut(s) 20, 522, 555
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 1010, 1151
AcuI CTGAAG 2 cut(s) 907, 996
AcyI GRCGYC 2 cut(s) 75, 1025
AfaI GTAC 2 cut(s) 466, 605
AfiI CCNNNNNNNGG 1 cut(s) 467
AgeI ACCGGT 1 cut(s) 103
AgsI TTSAA 5 cut(s) 190, 307, 316, 783, 1105
AjnI CCWGG 2 cut(s) 224, 871
AluBI AGCT 5 cut(s) 47, 352, 517, 1101, 1243
AluI AGCT 5 cut(s) 47, 352, 517, 1101, 1243
Alw21I GWGCWC 4 cut(s) 49, 154, 736, 1257
Alw26I GTCTC 4 cut(s) 171, 255, 692, 1169
Ama87I CYCGRG 2 cut(s) 258, 353
AoxI GGCC 2 cut(s) 3, 710
ApeKI GCWGC 1 cut(s) 129
ApoI RAATTY 2 cut(s) 1010, 1151
AsiGI ACCGGT 1 cut(s) 103
Asp700I GAANNNNTTC 1 cut(s) 816
AspS9I GGNCC 4 cut(s) 675, 710, 750, 1134
AsuHPI GGTGA 5 cut(s) 169, 202, 1061, 1179, 1186
AsuII TTCGAA 1 cut(s) 512
AvaI CYCGRG 2 cut(s) 258, 353
AvaII GGWCC 3 cut(s) 675, 750, 1134
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 1 cut(s) 49
BauI CACGAG 1 cut(s) 1019
Bbv12I GWGCWC 4 cut(s) 49, 154, 736, 1257
BbvI GCAGC 1 cut(s) 116
BccI CCATC 3 cut(s) 317, 1140, 1151
BceAI ACGGC 2 cut(s) 46, 88
BcgI CGANNNNNNTGC 2 cut(s) 111, 145
BciT130I CCWGG 2 cut(s) 226, 873
BcoDI GTCTC 4 cut(s) 171, 255, 692, 1169
BfaI CTAG 1 cut(s) 290
BfmI CTRYAG 1 cut(s) 1096
BglII AGATCT 1 cut(s) 918
BisI GCNGC 1 cut(s) 130
BlsI GCNGC 1 cut(s) 131
Bme1390I CCNGG 2 cut(s) 226, 873
Bme18I GGWCC 3 cut(s) 675, 750, 1134
BmeT110I CYCGRG 2 cut(s) 258, 353
BmgT120I GGNCC 4 cut(s) 675, 710, 750, 1134
BmiI GGNNCC 4 cut(s) 458, 677, 751, 1136
BmrFI CCNGG 2 cut(s) 226, 873
BmrI ACTGGG 1 cut(s) 157
BmsI GCATC 6 cut(s) 108, 281, 319, 816, 848, 1252
BmuI ACTGGG 1 cut(s) 157
BplI GAGNNNNNCTC 2 cut(s) 206, 238
BpmI CTGGAG 2 cut(s) 208, 894
Bpu14I TTCGAA 1 cut(s) 512
BsaBI GATNNNNATC 2 cut(s) 333, 768
BsaHI GRCGYC 2 cut(s) 75, 1025
BsaI GGTCTC 1 cut(s) 692
BsaJI CCNNGG 5 cut(s) 15, 276, 636, 1086, 1267
BsaWI WCCGGW 2 cut(s) 103, 361
Bsc4I CCNNNNNNNGG 1 cut(s) 467
Bse118I RCCGGY 2 cut(s) 103, 712
Bse1I ACTGG 9 cut(s) 54, 96, 163, 381, 472, 502, 1065, 1190, 1197
Bse3DI GCAATG 2 cut(s) 415, 833
Bse8I GATNNNNATC 2 cut(s) 333, 768
BseBI CCWGG 2 cut(s) 226, 873
BseDI CCNNGG 5 cut(s) 15, 276, 636, 1086, 1267
BseGI GGATG 4 cut(s) 272, 325, 769, 945
BseJI GATNNNNATC 2 cut(s) 333, 768
BseLI CCNNNNNNNGG 1 cut(s) 467
BseMI GCAATG 2 cut(s) 415, 833
BseMII CTCAG 1 cut(s) 618
BseNI ACTGG 9 cut(s) 54, 96, 163, 381, 472, 502, 1065, 1190, 1197
BseXI GCAGC 1 cut(s) 116
BshFI GGCC 2 cut(s) 5, 712
BshTI ACCGGT 1 cut(s) 103
BsiHKAI GWGCWC 4 cut(s) 49, 154, 736, 1257
BsiHKCI CYCGRG 2 cut(s) 258, 353
BsiSI CCGG 3 cut(s) 104, 362, 713
BslFI GGGAC 1 cut(s) 763
BslI CCNNNNNNNGG 1 cut(s) 467
BsmAI GTCTC 4 cut(s) 171, 255, 692, 1169
BsmFI GGGAC 1 cut(s) 763
BsmI GAATGC 1 cut(s) 903
BsnI GGCC 2 cut(s) 5, 712
Bso31I GGTCTC 1 cut(s) 692
BsoBI CYCGRG 2 cut(s) 258, 353
Bsp119I TTCGAA 1 cut(s) 512
Bsp1286I GDGCHC 4 cut(s) 49, 154, 736, 1257
Bsp143I GATC 4 cut(s) 535, 918, 1059, 1221
Bsp19I CCATGG 2 cut(s) 15, 636
BspACI CCGC 3 cut(s) 20, 522, 555
BspANI GGCC 2 cut(s) 5, 712
BspCNI CTCAG 1 cut(s) 619
BspLI GGNNCC 4 cut(s) 458, 677, 751, 1136
BspT104I TTCGAA 1 cut(s) 512
BspTNI GGTCTC 1 cut(s) 692
BsrDI GCAATG 2 cut(s) 415, 833
BsrFI RCCGGY 2 cut(s) 103, 712
BsrI ACTGG 9 cut(s) 54, 96, 163, 381, 472, 502, 1065, 1190, 1197
BssAI RCCGGY 2 cut(s) 103, 712
BssECI CCNNGG 5 cut(s) 15, 276, 636, 1086, 1267
BssMI GATC 4 cut(s) 535, 918, 1059, 1221
BssNI GRCGYC 2 cut(s) 75, 1025
BssSI CACGAG 1 cut(s) 1019
BssT1I CCWWGG 5 cut(s) 15, 276, 636, 1086, 1267
Bst2BI CACGAG 1 cut(s) 1019
Bst2UI CCWGG 2 cut(s) 226, 873
Bst4CI ACNGT 2 cut(s) 266, 296
BstACI GRCGYC 2 cut(s) 75, 1025
BstBI TTCGAA 1 cut(s) 512
BstC8I GCNNGC 5 cut(s) 45, 150, 199, 714, 718
BstDEI CTNAG 2 cut(s) 627, 1218
BstDSI CCRYGG 2 cut(s) 15, 636
BstF5I GGATG 4 cut(s) 272, 325, 769, 945
BstKTI GATC 4 cut(s) 538, 921, 1062, 1224
BstMAI GTCTC 4 cut(s) 171, 255, 692, 1169
BstMBI GATC 4 cut(s) 535, 918, 1059, 1221
BstMWI GCNNNNNNNGC 4 cut(s) 135, 338, 713, 835
BstNI CCWGG 2 cut(s) 226, 873
BstSCI CCNGG 2 cut(s) 224, 871
BstSFI CTRYAG 1 cut(s) 1096
BstV1I GCAGC 1 cut(s) 116
BstX2I RGATCY 1 cut(s) 918
BstXI CCANNNNNNTGG 1 cut(s) 16
BstYI RGATCY 1 cut(s) 918
BsuRI GGCC 2 cut(s) 5, 712
BtgI CCRYGG 2 cut(s) 15, 636
BtsCI GGATG 4 cut(s) 272, 325, 769, 945
BtsIMutI CAGTG 3 cut(s) 61, 113, 1204
Cac8I GCNNGC 5 cut(s) 45, 150, 199, 714, 718
Cfr10I RCCGGY 2 cut(s) 103, 712
Cfr13I GGNCC 4 cut(s) 675, 710, 750, 1134
CseI GACGC 3 cut(s) 64, 121, 1033
Csp6I GTAC 2 cut(s) 465, 604
CspAI ACCGGT 1 cut(s) 103
CviAII CATG 8 cut(s) 16, 144, 445, 503, 637, 669, 680, 1259
CviQI GTAC 2 cut(s) 465, 604
DdeI CTNAG 2 cut(s) 627, 1218
DpnI GATC 4 cut(s) 537, 920, 1061, 1223
DpnII GATC 4 cut(s) 535, 918, 1059, 1221
DraI TTTAAA 1 cut(s) 657
EaeI YGGCCR 1 cut(s) 3
EciI GGCGGA 1 cut(s) 35
Ecl136II GAGCTC 1 cut(s) 47
Eco130I CCWWGG 5 cut(s) 15, 276, 636, 1086, 1267
Eco24I GRGCYC 1 cut(s) 49
Eco31I GGTCTC 1 cut(s) 692
Eco32I GATATC 1 cut(s) 237
Eco47I GGWCC 3 cut(s) 675, 750, 1134
Eco53kI GAGCTC 1 cut(s) 47
Eco57I CTGAAG 2 cut(s) 907, 996
Eco88I CYCGRG 2 cut(s) 258, 353
EcoICRI GAGCTC 1 cut(s) 47
EcoO109I RGGNCCY 2 cut(s) 675, 1134
EcoRII CCWGG 2 cut(s) 224, 871
EcoRV GATATC 1 cut(s) 237
EcoT14I CCWWGG 5 cut(s) 15, 276, 636, 1086, 1267
EcoT38I GRGCYC 1 cut(s) 49
ErhI CCWWGG 5 cut(s) 15, 276, 636, 1086, 1267
FaeI CATG 8 cut(s) 19, 147, 448, 506, 640, 672, 683, 1262
FaqI GGGAC 1 cut(s) 763
FatI CATG 8 cut(s) 15, 143, 444, 502, 636, 668, 679, 1258
Fnu4HI GCNGC 1 cut(s) 130
FokI GGATG 4 cut(s) 259, 332, 756, 952
FriOI GRGCYC 1 cut(s) 49
Fsp4HI GCNGC 1 cut(s) 130
FspBI CTAG 1 cut(s) 290
GluI GCNGC 1 cut(s) 130
GsuI CTGGAG 2 cut(s) 208, 894
HaeIII GGCC 2 cut(s) 5, 712
HapII CCGG 3 cut(s) 104, 362, 713
HgaI GACGC 3 cut(s) 64, 121, 1033
Hin1I GRCGYC 2 cut(s) 75, 1025
Hin1II CATG 8 cut(s) 19, 147, 448, 506, 640, 672, 683, 1262
HindIII AAGCTT 1 cut(s) 515
HinfI GANTC 5 cut(s) 244, 569, 779, 965, 1161
HpaII CCGG 3 cut(s) 104, 362, 713
HphI GGTGA 5 cut(s) 169, 202, 1061, 1179, 1186
Hpy166II GTNNAC 2 cut(s) 37, 972
Hpy188I TCNGA 1 cut(s) 628
Hpy188III TCNNGA 4 cut(s) 232, 258, 821, 1021
Hpy8I GTNNAC 2 cut(s) 37, 972
Hpy99I CGWCG 3 cut(s) 29, 32, 74
HpyAV CCTTC 4 cut(s) 301, 310, 940, 1046
HpyCH4III ACNGT 2 cut(s) 266, 296
HpyCH4V TGCA 6 cut(s) 138, 341, 408, 739, 1035, 1208
HpyF10VI GCNNNNNNNGC 4 cut(s) 135, 338, 713, 835
HpyF3I CTNAG 2 cut(s) 627, 1218
Hsp92I GRCGYC 2 cut(s) 75, 1025
Hsp92II CATG 8 cut(s) 19, 147, 448, 506, 640, 672, 683, 1262
KroI GCCGGC 1 cut(s) 712
KroNI GCCGGC 1 cut(s) 714
Kzo9I GATC 4 cut(s) 535, 918, 1059, 1221
LmnI GCTCC 2 cut(s) 1108, 1240
Lsp1109I GCAGC 1 cut(s) 116
LweI GCATC 6 cut(s) 108, 281, 319, 816, 848, 1252
MaeI CTAG 1 cut(s) 290
MaeIII GTNAC 5 cut(s) 175, 505, 692, 1021, 1192
MalI GATC 4 cut(s) 537, 920, 1061, 1223
MboI GATC 4 cut(s) 535, 918, 1059, 1221
MboII GAAGA 1 cut(s) 913
MfeI CAATTG 1 cut(s) 342
MflI RGATCY 1 cut(s) 918
MhlI GDGCHC 4 cut(s) 49, 154, 736, 1257
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 10, 342, 376, 478, 1010, 1151, 1245
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 253, 1155
Mox20I TGGCCA 1 cut(s) 5
MroNI GCCGGC 1 cut(s) 712
MroXI GAANNNNTTC 1 cut(s) 816
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 656, 725
MslI CAYNNNNRTG 1 cut(s) 1260
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 3 cut(s) 104, 362, 713
MspR9I CCNGG 2 cut(s) 226, 873
MunI CAATTG 1 cut(s) 342
Mva1269I GAATGC 1 cut(s) 903
MvaI CCWGG 2 cut(s) 226, 873
MwoI GCNNNNNNNGC 4 cut(s) 135, 338, 713, 835
NaeI GCCGGC 1 cut(s) 714
NcoI CCATGG 2 cut(s) 15, 636
NdeII GATC 4 cut(s) 535, 918, 1059, 1221
NgoMIV GCCGGC 1 cut(s) 712
NlaIII CATG 8 cut(s) 19, 147, 448, 506, 640, 672, 683, 1262
NlaIV GGNNCC 4 cut(s) 458, 677, 751, 1136
NmuCI GTSAC 4 cut(s) 175, 505, 1021, 1192
NspV TTCGAA 1 cut(s) 512
PaeR7I CTCGAG 1 cut(s) 353
PcsI WCGNNNNNNNCGW 2 cut(s) 30, 66
PctI GAATGC 1 cut(s) 903
PdiI GCCGGC 1 cut(s) 714
PdmI GAANNNNTTC 1 cut(s) 816
PfeI GAWTC 3 cut(s) 569, 779, 965
PflFI GACNNNGTC 1 cut(s) 74
PfoI TCCNGGA 1 cut(s) 871
PinAI ACCGGT 1 cut(s) 103
PkrI GCNGC 1 cut(s) 131
PleI GAGTC 2 cut(s) 252, 1155
PpsI GAGTC 2 cut(s) 252, 1155
PpuMI RGGWCCY 2 cut(s) 675, 1134
PsiI TTATAA 2 cut(s) 588, 1008
Psp124BI GAGCTC 1 cut(s) 49
Psp5II RGGWCCY 2 cut(s) 675, 1134
Psp6I CCWGG 2 cut(s) 224, 871
PspGI CCWGG 2 cut(s) 224, 871
PspN4I GGNNCC 4 cut(s) 458, 677, 751, 1136
PspPI GGNCC 4 cut(s) 675, 710, 750, 1134
PspPPI RGGWCCY 2 cut(s) 675, 1134
PspXI VCTCGAGB 1 cut(s) 353
PsuI RGATCY 1 cut(s) 918
PsyI GACNNNGTC 1 cut(s) 74
RsaI GTAC 2 cut(s) 466, 605
RsaNI GTAC 2 cut(s) 465, 604
RseI CAYNNNNRTG 1 cut(s) 1260
SacI GAGCTC 1 cut(s) 49
SaqAI TTAA 2 cut(s) 656, 725
SatI GCNGC 1 cut(s) 130
Sau3AI GATC 4 cut(s) 535, 918, 1059, 1221
Sau96I GGNCC 4 cut(s) 675, 710, 750, 1134
SchI GAGTC 2 cut(s) 253, 1155
ScrFI CCNGG 2 cut(s) 226, 873
SduI GDGCHC 4 cut(s) 49, 154, 736, 1257
SfaNI GCATC 6 cut(s) 108, 281, 319, 816, 848, 1252
SfcI CTRYAG 1 cut(s) 1096
Sfr274I CTCGAG 1 cut(s) 353
SfuI TTCGAA 1 cut(s) 512
SinI GGWCC 3 cut(s) 675, 750, 1134
SlaI CTCGAG 1 cut(s) 353
SmiMI CAYNNNNRTG 1 cut(s) 1260
SmlI CTYRAG 1 cut(s) 353
SmoI CTYRAG 1 cut(s) 353
Sse9I AATT 7 cut(s) 10, 342, 376, 478, 1010, 1151, 1245
SsiI CCGC 3 cut(s) 20, 522, 555
SspI AATATT 1 cut(s) 394
SspMI CTAG 1 cut(s) 290
SstI GAGCTC 1 cut(s) 49
StyD4I CCNGG 2 cut(s) 224, 871
StyI CCWWGG 5 cut(s) 15, 276, 636, 1086, 1267
TaaI ACNGT 2 cut(s) 266, 296
TaqI TCGA 3 cut(s) 69, 354, 512
TasI AATT 7 cut(s) 10, 342, 376, 478, 1010, 1151, 1245
TatI WGTACW 1 cut(s) 464
TfiI GAWTC 3 cut(s) 569, 779, 965
Tru1I TTAA 2 cut(s) 656, 725
Tru9I TTAA 2 cut(s) 656, 725
TscAI CASTG 3 cut(s) 61, 120, 1204
TseFI GTSAC 4 cut(s) 175, 505, 1021, 1192
TseI GCWGC 1 cut(s) 129
Tsp45I GTSAC 4 cut(s) 175, 505, 1021, 1192
TspDTI ATGAA 5 cut(s) 560, 657, 758, 909, 959
TspRI CASTG 3 cut(s) 61, 120, 1204
Tth111I GACNNNGTC 1 cut(s) 74
VpaK11BI GGWCC 3 cut(s) 675, 750, 1134
XapI RAATTY 2 cut(s) 1010, 1151
XcmI CCANNNNNNNNNTGG 1 cut(s) 13
XhoI CTCGAG 1 cut(s) 353
XmnI GAANNNNTTC 1 cut(s) 816
XspI CTAG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.