MD17G1124300.v1.1

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000113
Physical Location & Seq
Forward (+)
10806561 .. 10807892
1332 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1124300.v1.1.491

Sequence Viewer

Length: 1332 bp
ATGTGGGCTCATTCAGACATTCCCATTTTTTTATATATAGTTCATGAAGTACCTTGCGACACAATGCTTTCTGCAATGACAAACTCAAGGGGTTGTTCTTGTATTTACAGCCTTTTTCCAAGAATCTCCACTTCGAAACTCCCGCCAGCAGCTGGAAGCAACACTACCACTGCGGACGGCCCCAATAGCCCCCGGCAGCTGAAGCAACCTCCCCCCTCTGATGGTAAACTCCGTCAACGAGTACCTCTCATTGACTACAACGACATTATTATCGAGATCCTCTCAAGGCTCCCAGTCAGATCTTTACTCCAATTTCGGTGTGTATGCAAGTCATGGCGCGCTTTAATCTCCAATCCTCATTTCGTTACGAAGCACCTCAGCCACGCTGTACTCACATGCATGAACAACACCAGAACCTTCACCCTCTTTATCTCGTCCACGCGTATCCACTCCATTGTCCACATCGCATTGAATGATCAGCAGAGTGATTCTCATGTTCGTGTTACAGTTAAAGAGCTTGATTTTCCAGTGATGATCCCGGATATTGTTCTTACACGAATTGTGGGTTCCTGCAACGGCTTGATATGTCTACAAGTAAACTGCAACAAAATTATCATATGGAATCCTTGTACTGGGCAGTCCAAGGTATTACCAAAACCTCTTTATTCCGGTTCGCTGTTTTATGGATTCGGGTATGATTCCACCACGGATGATTACAAGGTAATCCGAGGATCGTCTAAAACAACACTTGGTTCTAAAGAAGTCACGATTCAAGTTTTCTCACTCAAATCCGATTCATGGAGGAGTGCTGACGATGATCACGAAAATTATATTCACTTGGAAGGGAAGGGTTGCTTCTTAAACGGAGCTCTACATTGGGTAGAAGTTAGTATGGTTGCTTCGCGAATTTTGTCTTTCGATTTAGCAGAGGAGAAATTTAAGGAGAAGTTGCCATTGCCCTACCTTGGCAACAAAAACTGTGTCTTTGTGGGAGTTGGTGTTAGTAAAAATTGTCTATTTGTGTATTCTTACCCGTTGGAAATGGATCTTCGGATATGGGTGATGAAGGAGTACGGAGTCGCAAAATCTTGGGCTGAAGTCGTTAAAATTTCTTTGGATCAGATCCTACCTGAAGAGCGCAACGAATCTTTCAAGCCTCTATGCATTTTAGAGAATGATGAAGTTTTGTTGGACTACAAGCGAAACATATTGGCGTTGTATAATCCGAAGGGAAAGACGTTTAGAAACATTGCTATCGGGACTCAATCGGAAGTAGTGGTTTACATGGAAACGTTAGTCTCGCCGGTTACCGGCAGGGGAACGGACATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

444

Amino Acids

49.84

Weight (kDa)

8.3

Isoelectric Point (pI)

38.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 87 - 121 2.7e-10 F-box domain
F-box-like PF12937 87 - 121 2.4e-08 F-box-like
FBA_1 PF07734 145 - 408 4.7e-34 F-box associated beta propeller domain
FBA_3 PF08268 157 - 420 7.2e-25 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 152
AccI GTMKAC 1 cut(s) 589
AccII CGCG 3 cut(s) 339, 442, 904
AciI CCGC 2 cut(s) 143, 173
AclI AACGTT 1 cut(s) 1292
AclWI GGATC 6 cut(s) 271, 529, 739, 1053, 1117, 1125
AcsI RAATTY 3 cut(s) 906, 935, 1107
AcuI CTGAAG 3 cut(s) 221, 1116, 1152
AfaI GTAC 5 cut(s) 51, 243, 390, 631, 1073
AfiI CCNNNNNNNGG 6 cut(s) 152, 221, 632, 798, 965, 1310
AflIII ACRYGT 1 cut(s) 440
AgsI TTSAA 3 cut(s) 472, 773, 1153
AjuI GAANNNNNNNTTGG 2 cut(s) 344, 376
AluBI AGCT 4 cut(s) 152, 199, 517, 869
AluI AGCT 4 cut(s) 152, 199, 517, 869
Alw21I GWGCWC 1 cut(s) 871
Alw26I GTCTC 1 cut(s) 1303
AlwI GGATC 6 cut(s) 271, 529, 739, 1053, 1117, 1125
AlwNI CAGNNNCTG 1 cut(s) 152
AoxI GGCC 1 cut(s) 178
ApeKI GCWGC 2 cut(s) 149, 196
ApoI RAATTY 3 cut(s) 906, 935, 1107
ArsI GACNNNNNNTTYG 2 cut(s) 966, 998
AspLEI GCGC 3 cut(s) 339, 341, 1140
AspS9I GGNCC 1 cut(s) 179
AsuC2I CCSGG 2 cut(s) 193, 539
AsuHPI GGTGA 2 cut(s) 412, 1072
AsuII TTCGAA 1 cut(s) 134
BanII GRGCYC 2 cut(s) 10, 871
BarI GAAGNNNNNNTAC 4 cut(s) 148, 180, 883, 915
Bbv12I GWGCWC 1 cut(s) 871
BbvCI CCTCAGC 1 cut(s) 377
BbvI GCAGC 2 cut(s) 161, 208
BccI CCATC 1 cut(s) 215
BceAI ACGGC 2 cut(s) 193, 592
BciVI GTATCC 1 cut(s) 455
BclI TGATCA 2 cut(s) 475, 817
BcnI CCSGG 2 cut(s) 193, 539
BcoDI GTCTC 1 cut(s) 1303
BfuI GTATCC 1 cut(s) 455
BglII AGATCT 1 cut(s) 299
BisI GCNGC 2 cut(s) 150, 197
BlsI GCNGC 2 cut(s) 151, 198
Bme1390I CCNGG 2 cut(s) 193, 539
BmgT120I GGNCC 1 cut(s) 179
BmiI GGNNCC 3 cut(s) 181, 290, 568
BmrFI CCNGG 2 cut(s) 193, 539
BmrI ACTGGG 2 cut(s) 287, 642
BmuI ACTGGG 2 cut(s) 287, 642
BplI GAGNNNNNCTC 6 cut(s) 231, 263, 266, 298, 475, 507
Bpu10I CCTNAGC 1 cut(s) 377
Bpu14I TTCGAA 1 cut(s) 134
BpuEI CTTGAG 2 cut(s) 70, 268
BpuMI CCSGG 2 cut(s) 193, 539
BsaJI CCNNGG 5 cut(s) 191, 642, 705, 727, 964
BsaWI WCCGGW 1 cut(s) 668
BsaXI ACNNNNNCTCC 2 cut(s) 984, 1014
Bsc4I CCNNNNNNNGG 6 cut(s) 152, 221, 632, 798, 965, 1310
Bse118I RCCGGY 2 cut(s) 1303, 1310
Bse1I ACTGG 3 cut(s) 293, 527, 637
Bse3DI GCAATG 3 cut(s) 81, 953, 1248
BseDI CCNNGG 5 cut(s) 191, 642, 705, 727, 964
BseGI GGATG 1 cut(s) 715
BseLI CCNNNNNNNGG 6 cut(s) 152, 221, 632, 798, 965, 1310
BseMI GCAATG 3 cut(s) 81, 953, 1248
BseMII CTCAG 1 cut(s) 391
BseNI ACTGG 3 cut(s) 293, 527, 637
BsePI GCGCGC 1 cut(s) 337
BseRI GAGGAG 2 cut(s) 817, 944
BseXI GCAGC 2 cut(s) 161, 208
Bsh1236I CGCG 3 cut(s) 339, 442, 904
BshFI GGCC 1 cut(s) 180
BsiHKAI GWGCWC 1 cut(s) 871
BsiSI CCGG 5 cut(s) 193, 539, 669, 1304, 1311
BslFI GGGAC 1 cut(s) 1273
BslI CCNNNNNNNGG 6 cut(s) 152, 221, 632, 798, 965, 1310
BsmAI GTCTC 1 cut(s) 1303
BsmFI GGGAC 1 cut(s) 1273
BsnI GGCC 1 cut(s) 180
Bsp119I TTCGAA 1 cut(s) 134
Bsp1286I GDGCHC 2 cut(s) 10, 871
Bsp143I GATC 9 cut(s) 276, 299, 475, 534, 731, 817, 1045, 1117, 1122
Bsp68I TCGCGA 1 cut(s) 904
BspACI CCGC 2 cut(s) 143, 173
BspANI GGCC 1 cut(s) 180
BspCNI CTCAG 1 cut(s) 390
BspFNI CGCG 3 cut(s) 339, 442, 904
BspHI TCATGA 1 cut(s) 43
BspLI GGNNCC 3 cut(s) 181, 290, 568
BspPI GGATC 6 cut(s) 271, 529, 739, 1053, 1117, 1125
BspQI GCTCTTC 1 cut(s) 1128
BspT104I TTCGAA 1 cut(s) 134
BsrDI GCAATG 3 cut(s) 81, 953, 1248
BsrFI RCCGGY 2 cut(s) 1303, 1310
BsrI ACTGG 3 cut(s) 293, 527, 637
BssAI RCCGGY 2 cut(s) 1303, 1310
BssECI CCNNGG 5 cut(s) 191, 642, 705, 727, 964
BssHII GCGCGC 1 cut(s) 337
BssMI GATC 9 cut(s) 276, 299, 475, 534, 731, 817, 1045, 1117, 1122
BssT1I CCWWGG 2 cut(s) 642, 964
Bst4CI ACNGT 2 cut(s) 508, 980
Bst6I CTCTTC 1 cut(s) 1128
BstBI TTCGAA 1 cut(s) 134
BstC8I GCNNGC 2 cut(s) 147, 339
BstDEI CTNAG 1 cut(s) 377
BstDSI CCRYGG 1 cut(s) 705
BstEII GGTNACC 1 cut(s) 1306
BstF5I GGATG 1 cut(s) 715
BstFNI CGCG 3 cut(s) 339, 442, 904
BstHHI GCGC 3 cut(s) 339, 341, 1140
BstKTI GATC 9 cut(s) 279, 302, 478, 537, 734, 820, 1048, 1120, 1125
BstMAI GTCTC 1 cut(s) 1303
BstMBI GATC 9 cut(s) 276, 299, 475, 534, 731, 817, 1045, 1117, 1122
BstMWI GCNNNNNNNGC 2 cut(s) 186, 202
BstNSI RCATGY 1 cut(s) 399
BstPI GGTNACC 1 cut(s) 1306
BstSCI CCNGG 2 cut(s) 191, 537
BstUI CGCG 3 cut(s) 339, 442, 904
BstV1I GCAGC 2 cut(s) 161, 208
BstX2I RGATCY 4 cut(s) 276, 299, 1045, 1122
BstYI RGATCY 4 cut(s) 276, 299, 1045, 1122
BsuI GTATCC 1 cut(s) 455
BsuRI GGCC 1 cut(s) 180
BtgI CCRYGG 1 cut(s) 705
BtgZI GCGATG 1 cut(s) 448
BtsCI GGATG 1 cut(s) 715
BtsI GCAGTG 1 cut(s) 168
BtsIMutI CAGTG 2 cut(s) 168, 534
BtuMI TCGCGA 1 cut(s) 904
Cac8I GCNNGC 2 cut(s) 147, 339
CaiI CAGNNNCTG 1 cut(s) 152
CciI TCATGA 1 cut(s) 43
CfoI GCGC 3 cut(s) 339, 341, 1140
Cfr10I RCCGGY 2 cut(s) 1303, 1310
Cfr13I GGNCC 1 cut(s) 179
Csp6I GTAC 5 cut(s) 50, 242, 389, 630, 1072
CviAII CATG 7 cut(s) 44, 333, 396, 400, 494, 798, 1285
CviQI GTAC 5 cut(s) 50, 242, 389, 630, 1072
DdeI CTNAG 1 cut(s) 377
DpnI GATC 9 cut(s) 278, 301, 477, 536, 733, 819, 1047, 1119, 1124
DpnII GATC 9 cut(s) 276, 299, 475, 534, 731, 817, 1045, 1117, 1122
Eam1104I CTCTTC 1 cut(s) 1128
EarI CTCTTC 1 cut(s) 1128
Ecl136II GAGCTC 1 cut(s) 869
Eco130I CCWWGG 2 cut(s) 642, 964
Eco24I GRGCYC 2 cut(s) 10, 871
Eco53kI GAGCTC 1 cut(s) 869
Eco57I CTGAAG 3 cut(s) 221, 1116, 1152
Eco91I GGTNACC 1 cut(s) 1306
EcoICRI GAGCTC 1 cut(s) 869
EcoO65I GGTNACC 1 cut(s) 1306
EcoT14I CCWWGG 2 cut(s) 642, 964
EcoT22I ATGCAT 2 cut(s) 401, 1166
EcoT38I GRGCYC 2 cut(s) 10, 871
ErhI CCWWGG 2 cut(s) 642, 964
FaeI CATG 7 cut(s) 47, 336, 399, 403, 497, 801, 1288
FalI AAGNNNNNCTT 2 cut(s) 839, 871
FaqI GGGAC 1 cut(s) 1273
FatI CATG 7 cut(s) 43, 332, 395, 399, 493, 797, 1284
FauI CCCGC 1 cut(s) 150
FauNDI CATATG 1 cut(s) 617
FbaI TGATCA 2 cut(s) 475, 817
FblI GTMKAC 1 cut(s) 589
Fnu4HI GCNGC 2 cut(s) 150, 197
FokI GGATG 1 cut(s) 722
FriOI GRGCYC 2 cut(s) 10, 871
Fsp4HI GCNGC 2 cut(s) 150, 197
GlaI GCGC 3 cut(s) 338, 340, 1139
GluI GCNGC 2 cut(s) 150, 197
HaeIII GGCC 1 cut(s) 180
HapII CCGG 5 cut(s) 193, 539, 669, 1304, 1311
HhaI GCGC 3 cut(s) 339, 341, 1140
Hin1II CATG 7 cut(s) 47, 336, 399, 403, 497, 801, 1288
Hin6I GCGC 3 cut(s) 337, 339, 1138
HinP1I GCGC 3 cut(s) 337, 339, 1138
HincII GTYRAC 1 cut(s) 236
HindII GTYRAC 1 cut(s) 236
HpaII CCGG 5 cut(s) 193, 539, 669, 1304, 1311
HphI GGTGA 2 cut(s) 412, 1072
Hpy166II GTNNAC 7 cut(s) 227, 236, 438, 460, 590, 598, 1282
Hpy188III TCNNGA 6 cut(s) 44, 274, 766, 821, 903, 1258
Hpy8I GTNNAC 7 cut(s) 227, 236, 438, 460, 590, 598, 1282
HpyAV CCTTC 5 cut(s) 427, 836, 841, 1060, 1222
HpyCH4III ACNGT 2 cut(s) 508, 980
HpyCH4IV ACGT 2 cut(s) 1238, 1292
HpyCH4V TGCA 6 cut(s) 74, 327, 399, 573, 603, 1164
HpyF10VI GCNNNNNNNGC 2 cut(s) 186, 202
HpyF3I CTNAG 1 cut(s) 377
HpySE526I ACGT 2 cut(s) 1238, 1292
Hsp92II CATG 7 cut(s) 47, 336, 399, 403, 497, 801, 1288
HspAI GCGC 3 cut(s) 337, 339, 1138
Ksp22I TGATCA 2 cut(s) 475, 817
Kzo9I GATC 9 cut(s) 276, 299, 475, 534, 731, 817, 1045, 1117, 1122
LguI GCTCTTC 1 cut(s) 1128
LmnI GCTCC 2 cut(s) 294, 866
Lsp1109I GCAGC 2 cut(s) 161, 208
MaeII ACGT 2 cut(s) 1238, 1292
MaeIII GTNAC 4 cut(s) 364, 502, 763, 1306
MalI GATC 9 cut(s) 278, 301, 477, 536, 733, 819, 1047, 1119, 1124
MboI GATC 9 cut(s) 276, 299, 475, 534, 731, 817, 1045, 1117, 1122
MboII GAAGA 2 cut(s) 1040, 1145
MflI RGATCY 4 cut(s) 276, 299, 1045, 1122
MhlI GDGCHC 2 cut(s) 10, 871
MluCI AATT 8 cut(s) 311, 558, 609, 826, 906, 935, 1009, 1107
MluI ACGCGT 1 cut(s) 440
MlyI GAGTC 2 cut(s) 1086, 1255
MmeI TCCRAC 2 cut(s) 1017, 1170
Mph1103I ATGCAT 2 cut(s) 401, 1166
MseI TTAA 5 cut(s) 344, 510, 860, 939, 1104
MslI CAYNNNNRTG 2 cut(s) 398, 498
MspA1I CMGCKG 2 cut(s) 152, 199
MspI CCGG 5 cut(s) 193, 539, 669, 1304, 1311
MspR9I CCNGG 2 cut(s) 193, 539
MvnI CGCG 3 cut(s) 339, 442, 904
MwoI GCNNNNNNNGC 2 cut(s) 186, 202
NciI CCSGG 2 cut(s) 193, 539
NdeI CATATG 1 cut(s) 617
NdeII GATC 9 cut(s) 276, 299, 475, 534, 731, 817, 1045, 1117, 1122
NlaIII CATG 7 cut(s) 47, 336, 399, 403, 497, 801, 1288
NlaIV GGNNCC 3 cut(s) 181, 290, 568
NmuCI GTSAC 1 cut(s) 763
NruI TCGCGA 1 cut(s) 904
NsiI ATGCAT 2 cut(s) 401, 1166
NspI RCATGY 1 cut(s) 399
NspV TTCGAA 1 cut(s) 134
PagI TCATGA 1 cut(s) 43
PauI GCGCGC 1 cut(s) 337
PciSI GCTCTTC 1 cut(s) 1128
PcsI WCGNNNNNNNCGW 1 cut(s) 819
PfeI GAWTC 8 cut(s) 123, 488, 622, 687, 698, 769, 794, 1145
PflMI CCANNNNNTGG 1 cut(s) 152
PfoI TCCNGGA 1 cut(s) 537
PkrI GCNGC 2 cut(s) 151, 198
PleI GAGTC 2 cut(s) 1085, 1255
PpsI GAGTC 2 cut(s) 1085, 1255
Psp124BI GAGCTC 1 cut(s) 871
Psp1406I AACGTT 1 cut(s) 1292
PspEI GGTNACC 1 cut(s) 1306
PspN4I GGNNCC 3 cut(s) 181, 290, 568
PspPI GGNCC 1 cut(s) 179
PstNI CAGNNNCTG 1 cut(s) 152
PsuI RGATCY 4 cut(s) 276, 299, 1045, 1122
PteI GCGCGC 1 cut(s) 337
PvuII CAGCTG 2 cut(s) 152, 199
RruI TCGCGA 1 cut(s) 904
RsaI GTAC 5 cut(s) 51, 243, 390, 631, 1073
RsaNI GTAC 5 cut(s) 50, 242, 389, 630, 1072
RseI CAYNNNNRTG 2 cut(s) 398, 498
SacI GAGCTC 1 cut(s) 871
SapI GCTCTTC 1 cut(s) 1128
SaqAI TTAA 5 cut(s) 344, 510, 860, 939, 1104
SatI GCNGC 2 cut(s) 150, 197
Sau3AI GATC 9 cut(s) 276, 299, 475, 534, 731, 817, 1045, 1117, 1122
Sau96I GGNCC 1 cut(s) 179
SchI GAGTC 2 cut(s) 1086, 1255
ScrFI CCNGG 2 cut(s) 193, 539
SduI GDGCHC 2 cut(s) 10, 871
SfuI TTCGAA 1 cut(s) 134
SmiMI CAYNNNNRTG 2 cut(s) 398, 498
SmlI CTYRAG 2 cut(s) 85, 283
SmoI CTYRAG 2 cut(s) 85, 283
Sse9I AATT 8 cut(s) 311, 558, 609, 826, 906, 935, 1009, 1107
SsiI CCGC 2 cut(s) 143, 173
SstI GAGCTC 1 cut(s) 871
StyD4I CCNGG 2 cut(s) 191, 537
StyI CCWWGG 2 cut(s) 642, 964
TaaI ACNGT 2 cut(s) 508, 980
TaiI ACGT 2 cut(s) 1241, 1295
TaqI TCGA 3 cut(s) 134, 273, 918
TasI AATT 8 cut(s) 311, 558, 609, 826, 906, 935, 1009, 1107
TatI WGTACW 2 cut(s) 388, 629
TfiI GAWTC 8 cut(s) 123, 488, 622, 687, 698, 769, 794, 1145
Tru1I TTAA 5 cut(s) 344, 510, 860, 939, 1104
Tru9I TTAA 5 cut(s) 344, 510, 860, 939, 1104
TscAI CASTG 2 cut(s) 175, 534
TseFI GTSAC 1 cut(s) 763
TseI GCWGC 2 cut(s) 149, 196
Tsp45I GTSAC 1 cut(s) 763
TspDTI ATGAA 6 cut(s) 32, 60, 416, 786, 1079, 1194
TspGWI ACGGA 4 cut(s) 221, 722, 879, 1089
TspRI CASTG 2 cut(s) 175, 534
Van91I CCANNNNNTGG 1 cut(s) 152
XapI RAATTY 3 cut(s) 906, 935, 1107
XceI RCATGY 1 cut(s) 399
XmiI GTMKAC 1 cut(s) 589
Zsp2I ATGCAT 2 cut(s) 401, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.