FvH4_3g33320

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000113
Physical Location & Seq
Forward (+)
28712434 .. 28714385
1952 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g33320.t1

Sequence Viewer

Length: 1368 bp
ATGGCGGAGGACAGAAGCTCTAAGGGAGCTCAGATCGAGTTTTTCGACGACGAAATAATATCAGAGATTCTGGCGAGGCTTCCAGTCAAATCTGTGGTGCGATTCCGGTGCGTATCCAAGTGGTGGAGTGCTCTGATCTCCGATCCTTACTTCACAAAGAAGCACTTGAGCTACTCAAAAGAGGGCATCACCGAGAACACCTCAAGGCTGCTTTATTCATTGTACCCTCCGCAATCTCTGGACTACGAAGCACTGAAGGATTTGAAGGATCACAGTGATGGTTCTTTTGCCAACAGAGTTCTTGATTTTCCGGTACGGAAGCTCCCGCGCTATCATTTTCTTTGTAGTATTGTGGGTTGTTGCGATGGGTTGGTATGTATTATAGTCGAAGAAGAAGAAGATGGAGGATACTTTATGTTATGGAATCCATGTACTAGGAACTCCAGGAAGTTACCGAGAACTATTCCTAAACTATGCAACCCTGATCGTATGAGTTTCAAATTTTGTGGGTTTGGTTATGATTCTGCTACTGATGATTACAAGGTCATAGTAGGGGATATAAATCATATAGTGTTTGAAGAAACCACCGTTTACGTTTTTGCTCTAAAAACGAGTTCATGGAAGAAGCTCCCCATTATTAACAATCCTCTTGACATAACAGGTCGGGGTTTCTTTTTGAATGGAGCTTTACACTGGTTAACACGGAATCCAGGGCACTGTCCCCGAACAGTACTTTTGTCTTTTGATTTGGTGGAGGAGAAGTTTCATGACAAGATCCCATTACCCGATTGTGAAATTCAACAAATGAGTGTAGTTAAAAATTGTCTTTGTGTGTTTAATCACGCATTTTCCTGGCGTAATGTTACCACAATTTGGTTGATGAAGGAGTATGGGGTCAAGCAATCTTGGACTCCAGTGATAAGGTGTTCCACAGAGAATTTTCCTGGAGATTTCAGGCATGTCTCCGTGCAGCCTCTTTGCATTCTCGAGGATGGACAAGTTTTAGTGGTTACTAATTACGGTGAACGTTTCTTGGTGTTATATGATCCAAAGGAAAATACATTCAAGACTGTTACCAAGACTCATACTCAATTGAGTGCTGGAGCTTTCGTTTACACTGAGACTTTAGTTTCACCAGTAACCGGCAGTGCTGCTGTAGAGACTACATCTGATCCAAGTCATTGTTTTCCTGTAATTGTCAAGGCTGAAGATGGTCCTTTAGAAGATGCATACTGGAAAAAACGAGAAGCTGAAGCGGAGAAAGTAGCCGAGCATTCTGTTAATCCTCATCCGGAGAAGGTGACCGAGGAATTGAATAAAGATGTTGGCGAGCTTGTATATGAGCAACAGAAGCATAAGCAGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

456

Amino Acids

52.02

Weight (kDa)

5.91

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 17 - 53 3.3e-07 F-box domain
FBA_3 PF08268 107 - 361 5e-23 F-box associated beta propeller domain
FBA_1 PF07734 115 - 378 1.8e-26 F-box associated beta propeller domain
Pec_lyase_N PF04431 409 - 447 1.2e-08 Pectate lyase, N terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 123, 873
AccII CGCG 1 cut(s) 328
AccIII TCCGGA 1 cut(s) 1291
AciI CCGC 4 cut(s) 5, 230, 326, 1256
AclI AACGTT 1 cut(s) 1027
AclWI GGATC 5 cut(s) 137, 276, 769, 1040, 1166
AcsI RAATTY 3 cut(s) 500, 795, 937
AcuI CTGAAG 3 cut(s) 275, 1227, 1272
AfaI GTAC 4 cut(s) 224, 315, 433, 732
AfiI CCNNNNNNNGG 3 cut(s) 123, 873, 1142
AgsI TTSAA 7 cut(s) 265, 499, 578, 679, 800, 1066, 1315
AjnI CCWGG 4 cut(s) 443, 709, 851, 943
AluBI AGCT 9 cut(s) 18, 29, 171, 322, 628, 686, 1106, 1250, 1333
AluI AGCT 9 cut(s) 18, 29, 171, 322, 628, 686, 1106, 1250, 1333
Alw21I GWGCWC 2 cut(s) 31, 133
Alw26I GTCTC 3 cut(s) 967, 1115, 1154
AlwI GGATC 5 cut(s) 137, 276, 769, 1040, 1166
Ama87I CYCGRG 1 cut(s) 986
Aor13HI TCCGGA 1 cut(s) 1291
ApeKI GCWGC 3 cut(s) 208, 970, 1151
ApoI RAATTY 3 cut(s) 500, 795, 937
AspLEI GCGC 1 cut(s) 330
AspS9I GGNCC 1 cut(s) 1214
AsuHPI GGTGA 4 cut(s) 181, 1034, 1125, 1312
AvaI CYCGRG 1 cut(s) 986
AvaII GGWCC 1 cut(s) 1214
BaeGI GKGCMC 1 cut(s) 717
BanII GRGCYC 1 cut(s) 31
Bbv12I GWGCWC 2 cut(s) 31, 133
BbvI GCAGC 3 cut(s) 195, 982, 1138
BccI CCATC 5 cut(s) 272, 359, 395, 986, 1205
BcgI CGANNNNNNTGC 2 cut(s) 90, 124
BciT130I CCWGG 4 cut(s) 445, 711, 853, 945
BciVI GTATCC 2 cut(s) 124, 401
BcoDI GTCTC 3 cut(s) 967, 1115, 1154
BfaI CTAG 1 cut(s) 435
BfmI CTRYAG 1 cut(s) 1155
BfuI GTATCC 2 cut(s) 124, 401
BisI GCNGC 3 cut(s) 209, 971, 1152
BlsI GCNGC 3 cut(s) 210, 972, 1153
BmcAI AGTACT 1 cut(s) 732
Bme1390I CCNGG 4 cut(s) 445, 711, 853, 945
Bme18I GGWCC 1 cut(s) 1214
BmeT110I CYCGRG 1 cut(s) 986
BmgT120I GGNCC 1 cut(s) 1214
BmrFI CCNGG 4 cut(s) 445, 711, 853, 945
BmsI GCATC 2 cut(s) 195, 1216
BplI GAGNNNNNCTC 2 cut(s) 185, 217
BpmI CTGGAG 4 cut(s) 427, 897, 966, 1122
BpuEI CTTGAG 2 cut(s) 187, 187
BsaBI GATNNNNATC 1 cut(s) 561
BsaJI CCNNGG 2 cut(s) 710, 1305
BsaWI WCCGGW 3 cut(s) 105, 310, 1291
BsaXI ACNNNNNCTCC 6 cut(s) 306, 336, 746, 776, 1095, 1125
Bsc4I CCNNNNNNNGG 3 cut(s) 123, 873, 1142
Bse118I RCCGGY 1 cut(s) 1142
Bse1I ACTGG 5 cut(s) 83, 698, 914, 1136, 1238
Bse8I GATNNNNATC 1 cut(s) 561
BseAI TCCGGA 1 cut(s) 1291
BseBI CCWGG 4 cut(s) 445, 711, 853, 945
BseDI CCNNGG 2 cut(s) 710, 1305
BseGI GGATG 2 cut(s) 997, 1288
BseJI GATNNNNATC 1 cut(s) 561
BseLI CCNNNNNNNGG 3 cut(s) 123, 873, 1142
BseMII CTCAG 2 cut(s) 44, 1110
BseNI ACTGG 5 cut(s) 83, 698, 914, 1136, 1238
BseRI GAGGAG 1 cut(s) 770
BseSI GKGCMC 1 cut(s) 717
BseXI GCAGC 3 cut(s) 195, 982, 1138
BsgI GTGCAG 1 cut(s) 989
Bsh1236I CGCG 1 cut(s) 328
BsiHKAI GWGCWC 2 cut(s) 31, 133
BsiHKCI CYCGRG 1 cut(s) 986
BsiSI CCGG 4 cut(s) 106, 311, 1143, 1292
BslFI GGGAC 1 cut(s) 705
BslI CCNNNNNNNGG 3 cut(s) 123, 873, 1142
BsmAI GTCTC 3 cut(s) 967, 1115, 1154
BsmFI GGGAC 1 cut(s) 705
BsmI GAATGC 2 cut(s) 981, 1273
BsoBI CYCGRG 1 cut(s) 986
Bsp1286I GDGCHC 3 cut(s) 31, 133, 717
Bsp13I TCCGGA 1 cut(s) 1291
Bsp143I GATC 8 cut(s) 33, 135, 142, 268, 484, 774, 1045, 1171
BspACI CCGC 4 cut(s) 5, 230, 326, 1256
BspCNI CTCAG 2 cut(s) 43, 1111
BspEI TCCGGA 1 cut(s) 1291
BspFNI CGCG 1 cut(s) 328
BspHI TCATGA 1 cut(s) 766
BspPI GGATC 5 cut(s) 137, 276, 769, 1040, 1166
BsrFI RCCGGY 1 cut(s) 1142
BsrI ACTGG 5 cut(s) 83, 698, 914, 1136, 1238
BssAI RCCGGY 1 cut(s) 1142
BssECI CCNNGG 2 cut(s) 710, 1305
BssMI GATC 8 cut(s) 33, 135, 142, 268, 484, 774, 1045, 1171
Bst2UI CCWGG 4 cut(s) 445, 711, 853, 945
Bst4CI ACNGT 6 cut(s) 275, 589, 719, 730, 1022, 1072
BstC8I GCNNGC 1 cut(s) 1331
BstDEI CTNAG 3 cut(s) 21, 30, 1119
BstEII GGTNACC 1 cut(s) 1300
BstF5I GGATG 2 cut(s) 997, 1288
BstFNI CGCG 1 cut(s) 328
BstHHI GCGC 1 cut(s) 330
BstKTI GATC 8 cut(s) 36, 138, 145, 271, 487, 777, 1048, 1174
BstMAI GTCTC 3 cut(s) 967, 1115, 1154
BstMBI GATC 8 cut(s) 33, 135, 142, 268, 484, 774, 1045, 1171
BstMWI GCNNNNNNNGC 1 cut(s) 1351
BstNI CCWGG 4 cut(s) 445, 711, 853, 945
BstNSI RCATGY 1 cut(s) 962
BstPI GGTNACC 1 cut(s) 1300
BstSCI CCNGG 4 cut(s) 443, 709, 851, 943
BstSFI CTRYAG 1 cut(s) 1155
BstSLI GKGCMC 1 cut(s) 717
BstUI CGCG 1 cut(s) 328
BstV1I GCAGC 3 cut(s) 195, 982, 1138
BstX2I RGATCY 1 cut(s) 774
BstYI RGATCY 1 cut(s) 774
BsuI GTATCC 2 cut(s) 124, 401
BtgZI GCGATG 1 cut(s) 378
BtsCI GGATG 2 cut(s) 997, 1288
BtsI GCAGTG 1 cut(s) 1153
BtsIMutI CAGTG 7 cut(s) 251, 280, 691, 715, 921, 1116, 1153
Cac8I GCNNGC 1 cut(s) 1331
CciI TCATGA 1 cut(s) 766
CfoI GCGC 1 cut(s) 330
Cfr10I RCCGGY 1 cut(s) 1142
Cfr13I GGNCC 1 cut(s) 1214
Csp6I GTAC 4 cut(s) 223, 314, 432, 731
CspCI CAANNNNNGTGG 2 cut(s) 487, 522
CviAII CATG 4 cut(s) 429, 618, 767, 959
CviQI GTAC 4 cut(s) 223, 314, 432, 731
DdeI CTNAG 3 cut(s) 21, 30, 1119
DpnI GATC 8 cut(s) 35, 137, 144, 270, 486, 776, 1047, 1173
DpnII GATC 8 cut(s) 33, 135, 142, 268, 484, 774, 1045, 1171
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 29
Eco24I GRGCYC 1 cut(s) 31
Eco47I GGWCC 1 cut(s) 1214
Eco53kI GAGCTC 1 cut(s) 29
Eco57I CTGAAG 3 cut(s) 275, 1227, 1272
Eco88I CYCGRG 1 cut(s) 986
Eco91I GGTNACC 1 cut(s) 1300
EcoICRI GAGCTC 1 cut(s) 29
EcoO65I GGTNACC 1 cut(s) 1300
EcoRII CCWGG 4 cut(s) 443, 709, 851, 943
EcoT22I ATGCAT 1 cut(s) 1231
EcoT38I GRGCYC 1 cut(s) 31
FaeI CATG 4 cut(s) 432, 621, 770, 962
FalI AAGNNNNNCTT 2 cut(s) 149, 181
FaqI GGGAC 1 cut(s) 705
FatI CATG 4 cut(s) 428, 617, 766, 958
FauI CCCGC 1 cut(s) 333
Fnu4HI GCNGC 3 cut(s) 209, 971, 1152
FokI GGATG 2 cut(s) 1004, 1275
FriOI GRGCYC 1 cut(s) 31
Fsp4HI GCNGC 3 cut(s) 209, 971, 1152
FspBI CTAG 1 cut(s) 435
GlaI GCGC 1 cut(s) 329
GluI GCNGC 3 cut(s) 209, 971, 1152
GsuI CTGGAG 4 cut(s) 427, 897, 966, 1122
HapII CCGG 4 cut(s) 106, 311, 1143, 1292
HhaI GCGC 1 cut(s) 330
Hin1II CATG 4 cut(s) 432, 621, 770, 962
Hin6I GCGC 1 cut(s) 328
HinP1I GCGC 1 cut(s) 328
HincII GTYRAC 1 cut(s) 699
HindII GTYRAC 1 cut(s) 699
HinfI GANTC 7 cut(s) 67, 102, 424, 521, 706, 910, 1081
HpaI GTTAAC 1 cut(s) 699
HpaII CCGG 4 cut(s) 106, 311, 1143, 1292
HphI GGTGA 4 cut(s) 181, 1034, 1125, 1312
Hpy166II GTNNAC 4 cut(s) 592, 699, 1025, 1114
Hpy188I TCNGA 5 cut(s) 33, 64, 135, 142, 1171
Hpy188III TCNNGA 7 cut(s) 239, 302, 650, 767, 986, 1066, 1292
Hpy8I GTNNAC 4 cut(s) 592, 699, 1025, 1114
Hpy99I CGWCG 2 cut(s) 50, 53
HpyAV CCTTC 4 cut(s) 250, 259, 877, 1291
HpyCH4III ACNGT 6 cut(s) 275, 589, 719, 730, 1022, 1072
HpyCH4IV ACGT 2 cut(s) 594, 1027
HpyCH4V TGCA 4 cut(s) 477, 970, 981, 1229
HpyF10VI GCNNNNNNNGC 1 cut(s) 1351
HpyF3I CTNAG 3 cut(s) 21, 30, 1119
HpySE526I ACGT 2 cut(s) 594, 1027
Hsp92II CATG 4 cut(s) 432, 621, 770, 962
HspAI GCGC 1 cut(s) 328
Kpn2I TCCGGA 1 cut(s) 1291
KspAI GTTAAC 1 cut(s) 699
Kzo9I GATC 8 cut(s) 33, 135, 142, 268, 484, 774, 1045, 1171
LmnI GCTCC 5 cut(s) 26, 327, 633, 683, 1103
Lsp1109I GCAGC 3 cut(s) 195, 982, 1138
LweI GCATC 2 cut(s) 195, 1216
MaeI CTAG 1 cut(s) 435
MaeII ACGT 2 cut(s) 594, 1027
MaeIII GTNAC 6 cut(s) 450, 862, 1009, 1072, 1138, 1300
MalI GATC 8 cut(s) 35, 137, 144, 270, 486, 776, 1047, 1173
MboI GATC 8 cut(s) 33, 135, 142, 268, 484, 774, 1045, 1171
MboII GAAGA 8 cut(s) 401, 404, 407, 410, 590, 634, 1220, 1235
MfeI CAATTG 1 cut(s) 1091
MflI RGATCY 1 cut(s) 774
MhlI GDGCHC 3 cut(s) 31, 133, 717
MluCI AATT 9 cut(s) 500, 795, 820, 870, 937, 1015, 1091, 1194, 1310
MlyI GAGTC 2 cut(s) 904, 1075
Mph1103I ATGCAT 1 cut(s) 1231
MroI TCCGGA 1 cut(s) 1291
MseI TTAA 5 cut(s) 639, 698, 816, 837, 1281
MslI CAYNNNNRTG 1 cut(s) 276
MspI CCGG 4 cut(s) 106, 311, 1143, 1292
MspR9I CCNGG 4 cut(s) 445, 711, 853, 945
MunI CAATTG 1 cut(s) 1091
Mva1269I GAATGC 2 cut(s) 981, 1273
MvaI CCWGG 4 cut(s) 445, 711, 853, 945
MvnI CGCG 1 cut(s) 328
MwoI GCNNNNNNNGC 1 cut(s) 1351
NdeII GATC 8 cut(s) 33, 135, 142, 268, 484, 774, 1045, 1171
NlaIII CATG 4 cut(s) 432, 621, 770, 962
NmeAIII GCCGAG 1 cut(s) 1294
NmuCI GTSAC 1 cut(s) 1300
NsiI ATGCAT 1 cut(s) 1231
NspI RCATGY 1 cut(s) 962
PaeR7I CTCGAG 1 cut(s) 986
PagI TCATGA 1 cut(s) 766
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PctI GAATGC 2 cut(s) 981, 1273
PfeI GAWTC 5 cut(s) 67, 102, 424, 521, 706
PflMI CCANNNNNTGG 2 cut(s) 123, 873
PfoI TCCNGGA 2 cut(s) 443, 943
PkrI GCNGC 3 cut(s) 210, 972, 1153
PleI GAGTC 2 cut(s) 904, 1075
PpsI GAGTC 2 cut(s) 904, 1075
Psp124BI GAGCTC 1 cut(s) 31
Psp1406I AACGTT 1 cut(s) 1027
Psp6I CCWGG 4 cut(s) 443, 709, 851, 943
PspEI GGTNACC 1 cut(s) 1300
PspGI CCWGG 4 cut(s) 443, 709, 851, 943
PspPI GGNCC 1 cut(s) 1214
PsuI RGATCY 1 cut(s) 774
RsaI GTAC 4 cut(s) 224, 315, 433, 732
RsaNI GTAC 4 cut(s) 223, 314, 432, 731
RseI CAYNNNNRTG 1 cut(s) 276
SacI GAGCTC 1 cut(s) 31
SaqAI TTAA 5 cut(s) 639, 698, 816, 837, 1281
SatI GCNGC 3 cut(s) 209, 971, 1152
Sau3AI GATC 8 cut(s) 33, 135, 142, 268, 484, 774, 1045, 1171
Sau96I GGNCC 1 cut(s) 1214
ScaI AGTACT 1 cut(s) 732
SchI GAGTC 2 cut(s) 904, 1075
ScrFI CCNGG 4 cut(s) 445, 711, 853, 945
SduI GDGCHC 3 cut(s) 31, 133, 717
SfaNI GCATC 2 cut(s) 195, 1216
SfcI CTRYAG 1 cut(s) 1155
Sfr274I CTCGAG 1 cut(s) 986
SinI GGWCC 1 cut(s) 1214
SlaI CTCGAG 1 cut(s) 986
SmiMI CAYNNNNRTG 1 cut(s) 276
SmlI CTYRAG 3 cut(s) 166, 202, 986
SmoI CTYRAG 3 cut(s) 166, 202, 986
Sse9I AATT 9 cut(s) 500, 795, 820, 870, 937, 1015, 1091, 1194, 1310
SsiI CCGC 4 cut(s) 5, 230, 326, 1256
SspMI CTAG 1 cut(s) 435
SstI GAGCTC 1 cut(s) 31
StyD4I CCNGG 4 cut(s) 443, 709, 851, 943
TaaI ACNGT 6 cut(s) 275, 589, 719, 730, 1022, 1072
TaiI ACGT 2 cut(s) 597, 1030
TaqI TCGA 4 cut(s) 36, 45, 387, 987
TaqII GACCGA 1 cut(s) 1319
TasI AATT 9 cut(s) 500, 795, 820, 870, 937, 1015, 1091, 1194, 1310
TatI WGTACW 2 cut(s) 431, 730
TfiI GAWTC 5 cut(s) 67, 102, 424, 521, 706
Tru1I TTAA 5 cut(s) 639, 698, 816, 837, 1281
Tru9I TTAA 5 cut(s) 639, 698, 816, 837, 1281
TscAI CASTG 7 cut(s) 258, 280, 698, 722, 921, 1123, 1153
TseFI GTSAC 1 cut(s) 1300
TseI GCWGC 3 cut(s) 208, 970, 1151
Tsp45I GTSAC 1 cut(s) 1300
TspDTI ATGAA 4 cut(s) 207, 606, 755, 896
TspGWI ACGGA 3 cut(s) 331, 718, 955
TspRI CASTG 7 cut(s) 258, 280, 698, 722, 921, 1123, 1153
Van91I CCANNNNNTGG 2 cut(s) 123, 873
VpaK11BI GGWCC 1 cut(s) 1214
XapI RAATTY 3 cut(s) 500, 795, 937
XceI RCATGY 1 cut(s) 962
XhoI CTCGAG 1 cut(s) 986
XspI CTAG 1 cut(s) 435
ZrmI AGTACT 1 cut(s) 732
Zsp2I ATGCAT 1 cut(s) 1231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.