Rmu_sc0001004.1_g000027

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001004.1
OG0000113
Physical Location & Seq
Forward (+)
98069 .. 103215
5147 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001004.1_g000027.1.cds

Sequence Viewer

Length: 1929 bp
atgaagcaccaagtcccgagcaaagtcgttgtagcagatcagacccctggagcttctccgagtcatttaattttggagctctttgatcaaggagatcgatatgggtctcaatcgatgtcagacatggaggaaccagattctgggtcgaatccgcagacccacccgatcaagttcgaagctaaagaagaagaagaatcgaatcccctgaggctctatgtcgctgaagcttctgatgagcgtacaaaccatttcatgggcctccgcattctcggtcttcctggtgtcgagtattcgtctgaagcaggtcgatgccaagatcgggaaatgtgggtgggaggtggtggttgggagacagaagaggttgggggttttggagagatggagctggaggttgagcttgaagaaggtgggatcgatatgaatttggattcagatgaggtgaaggagaagttgggaggggaggttgaggatggagttgtggttttggatccacccaatcccatcggcgtccccggaagcttctccaatctcggtgataatcaggtcggcgatgttgcggaggtcaatcactgcatcggaggggatgagatcgagctcccggatgctactggtggacctgtagttcgaggtgttcggcaaattgcagtcatagtcggcggagaagtcgtcaacttcgaattcggagctgtggtcaacggagaagcggtggctggaggaggaggagccgggattggcgagggacaacaactggttctctccggtaccggacccagctccgagtctcttgatttcgacgccgtcatcgtcgagatcctctcatggctgccggccaaatctctgctccgattccggtgcgtatgcaaagcatggcgggcgttgatctccgatccatatttcatcagaaaacacctcagccgcatcaacaccaaaatcaatagcagctactctctcctttttagggataagaactccagtttccgatccatagactgtgaagcattattcaagtgttcaagccatgttgatggtcccgttccgagcagagagcttgattttccggtaattgatccgcggtttgaatttgagtttattgagataattggttcttgcaatggcttgatatgtctactaattgattcggatagtttagtctttatgttatggaatccttgcactagagaatccaaggtgttaccggaacctccttctgagctctacctaaagttttatggattcggttatgattccacaaccgatgattacaagttaatagtgggattgtctgcttccagcgccagtgaatatgttgcttttgcgtttacactaaaaacgggttcatggaggaaggttcagagcctgaaccagaattttagggtgctttggaatggctgtttggtaaacgaaactctacattgggtattaaatgaacgggatgagtttcgtagggtgattgcttccaagttagtgtcatttgacttagccgaggagaaatttcatgagattgcattcccatattttcctaattctgttgacagatgtaatttggttgcaagagttggaaatattagaaattctttaatcttacactgtggacccatctcgaccagacccatctcaaccagttctaggttagattttaggatttgggtgatgaaggaatatggagtcgagaaatcctggaatgaagtcatgaaaatcccttcggagattctgcccggagatcatttcaggtgcgagaggcctttatgcatttctgatgatggtgcagcaactttgattgatgtctttgatgtatatgacgatcgctgcttctttacattatacaatccgaaggaaaagacatgtaggaacgttactgacaattgtgtgtctaaaccggcaacttatgtagaaactttagtttccccattaacaggcagtggcgtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

642

Amino Acids

70.96

Weight (kDa)

4.67

Isoelectric Point (pI)

38.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 293
Acc65I GGTACC 1 cut(s) 761
AccB1I GGYRCC 1 cut(s) 761
AccB7I CCANNNNNTGG 2 cut(s) 140, 253
AccI GTMKAC 1 cut(s) 1126
AccII CGCG 1 cut(s) 1072
AciI CCGC 9 cut(s) 152, 262, 557, 657, 704, 871, 916, 1070, 1072
AclI AACGTT 1 cut(s) 1851
AclWI GGATC 7 cut(s) 419, 482, 495, 805, 881, 975, 1061
AcoI YGGCCR 1 cut(s) 828
AcsI RAATTY 6 cut(s) 421, 677, 1079, 1366, 1490, 1570
AcuI CTGAAG 2 cut(s) 243, 318
AcyI GRCGYC 2 cut(s) 507, 795
AfaI GTAC 2 cut(s) 241, 763
AfiI CCNNNNNNNGG 6 cut(s) 140, 253, 319, 958, 1626, 1913
AflIII ACRYGT 1 cut(s) 1841
AgsI TTSAA 4 cut(s) 401, 1006, 1014, 1079
AjnI CCWGG 3 cut(s) 46, 277, 1676
AjuI GAANNNNNNNTTGG 4 cut(s) 434, 466, 1376, 1408
AloI GAACNNNNNNTCC 2 cut(s) 606, 638
Alw21I GWGCWC 3 cut(s) 81, 597, 1215
Alw26I GTCTC 3 cut(s) 111, 344, 786
AlwI GGATC 7 cut(s) 419, 482, 495, 805, 881, 975, 1061
AlwNI CAGNNNCTG 2 cut(s) 140, 1357
Ama87I CYCGRG 1 cut(s) 16
AoxI GGCC 3 cut(s) 256, 828, 1739
ApeKI GCWGC 4 cut(s) 823, 939, 1766, 1806
ApoI RAATTY 6 cut(s) 421, 677, 1079, 1366, 1490, 1570
ArsI GACNNNNNNTTYG 2 cut(s) 606, 638
Asp718I GGTACC 1 cut(s) 761
AspLEI GCGC 1 cut(s) 1295
AspS9I GGNCC 5 cut(s) 256, 614, 767, 1028, 1592
AsuC2I CCSGG 4 cut(s) 513, 599, 727, 1716
AsuHPI GGTGA 4 cut(s) 451, 545, 1459, 1660
AsuII TTCGAA 2 cut(s) 174, 675
AvaI CYCGRG 1 cut(s) 16
AvaII GGWCC 4 cut(s) 614, 767, 1028, 1592
AxyI CCTNAGG 1 cut(s) 206
BamHI GGATCC 1 cut(s) 487
BanI GGYRCC 1 cut(s) 761
BanII GRGCYC 3 cut(s) 81, 597, 1215
BbsI GAAGAC 1 cut(s) 266
Bbv12I GWGCWC 3 cut(s) 81, 597, 1215
BbvCI CCTCAGC 1 cut(s) 911
BbvI GCAGC 4 cut(s) 810, 951, 1778, 1793
BccI CCATC 7 cut(s) 373, 464, 509, 1019, 1604, 1619, 1754
BceAI ACGGC 1 cut(s) 782
BcgI CGANNNNNNTGC 2 cut(s) 834, 868
BciT130I CCWGG 3 cut(s) 48, 279, 1678
BclI TGATCA 1 cut(s) 85
BcnI CCSGG 4 cut(s) 513, 599, 727, 1716
BcoDI GTCTC 3 cut(s) 111, 344, 786
BfaI CTAG 2 cut(s) 1176, 1626
BfmI CTRYAG 1 cut(s) 618
BfoI RGCGCY 1 cut(s) 1296
BfuAI ACCTGC 1 cut(s) 293
BisI GCNGC 5 cut(s) 824, 916, 940, 1767, 1807
BlsI GCNGC 5 cut(s) 825, 917, 941, 1768, 1808
Bme1390I CCNGG 7 cut(s) 48, 279, 513, 599, 727, 1678, 1716
Bme18I GGWCC 4 cut(s) 614, 767, 1028, 1592
BmeT110I CYCGRG 1 cut(s) 16
BmgT120I GGNCC 5 cut(s) 256, 614, 767, 1028, 1592
BmiI GGNNCC 8 cut(s) 132, 489, 724, 763, 769, 1030, 1200, 1594
BmrFI CCNGG 7 cut(s) 48, 279, 513, 599, 727, 1678, 1716
BmsI GCATC 4 cut(s) 299, 582, 592, 927
BpiI GAAGAC 1 cut(s) 266
BplI GAGNNNNNCTC 2 cut(s) 800, 832
BpmI CTGGAG 4 cut(s) 69, 407, 732, 955
Bpu10I CCTNAGC 1 cut(s) 911
Bpu14I TTCGAA 2 cut(s) 174, 675
BpuMI CCSGG 4 cut(s) 513, 599, 727, 1716
Bsa29I ATCGAT 3 cut(s) 97, 113, 414
BsaHI GRCGYC 2 cut(s) 507, 795
BsaI GGTCTC 1 cut(s) 111
BsaJI CCNNGG 5 cut(s) 46, 511, 1070, 1185, 1482
BsaWI WCCGGW 5 cut(s) 758, 764, 849, 1057, 1195
Bsc4I CCNNNNNNNGG 6 cut(s) 140, 253, 319, 958, 1626, 1913
Bse118I RCCGGY 2 cut(s) 826, 1876
Bse1I ACTGG 5 cut(s) 613, 753, 972, 1296, 1620
Bse21I CCTNAGG 1 cut(s) 206
Bse3DI GCAATG 1 cut(s) 1117
BseBI CCWGG 3 cut(s) 48, 279, 1678
BseCI ATCGAT 3 cut(s) 97, 113, 414
BseDI CCNNGG 5 cut(s) 46, 511, 1070, 1185, 1482
BseGI GGATG 4 cut(s) 475, 589, 607, 1438
BseLI CCNNNNNNNGG 6 cut(s) 140, 253, 319, 958, 1626, 1913
BseMI GCAATG 1 cut(s) 1117
BseMII CTCAG 3 cut(s) 197, 925, 1200
BseNI ACTGG 5 cut(s) 613, 753, 972, 1296, 1620
BseRI GAGGAG 4 cut(s) 729, 732, 735, 1499
BseXI GCAGC 4 cut(s) 810, 951, 1778, 1793
BseYI CCCAGC 1 cut(s) 770
BsgI GTGCAG 1 cut(s) 1785
Bsh1236I CGCG 1 cut(s) 1072
Bsh1285I CGRYCG 1 cut(s) 1804
BshFI GGCC 3 cut(s) 258, 830, 1741
BshNI GGYRCC 1 cut(s) 761
BshVI ATCGAT 3 cut(s) 97, 113, 414
BsiEI CGRYCG 1 cut(s) 1804
BsiHKAI GWGCWC 3 cut(s) 81, 597, 1215
BsiHKCI CYCGRG 1 cut(s) 16
BslFI GGGAC 3 cut(s) 494, 753, 1014
BslI CCNNNNNNNGG 6 cut(s) 140, 253, 319, 958, 1626, 1913
BsmAI GTCTC 3 cut(s) 111, 344, 786
BsmFI GGGAC 3 cut(s) 494, 753, 1014
BsmI GAATGC 2 cut(s) 264, 1505
BsnI GGCC 3 cut(s) 258, 830, 1741
Bso31I GGTCTC 1 cut(s) 111
BsoBI CYCGRG 1 cut(s) 16
Bsp119I TTCGAA 2 cut(s) 174, 675
Bsp1286I GDGCHC 3 cut(s) 81, 597, 1215
BspACI CCGC 9 cut(s) 152, 262, 557, 657, 704, 871, 916, 1070, 1072
BspANI GGCC 3 cut(s) 258, 830, 1741
BspCNI CTCAG 3 cut(s) 198, 924, 1201
BspDI ATCGAT 3 cut(s) 97, 113, 414
BspFNI CGCG 1 cut(s) 1072
BspHI TCATGA 2 cut(s) 1495, 1689
BspLI GGNNCC 8 cut(s) 132, 489, 724, 763, 769, 1030, 1200, 1594
BspMI ACCTGC 1 cut(s) 293
BspPI GGATC 7 cut(s) 419, 482, 495, 805, 881, 975, 1061
BspT104I TTCGAA 2 cut(s) 174, 675
BspT107I GGYRCC 1 cut(s) 761
BspTNI GGTCTC 1 cut(s) 111
BsrDI GCAATG 1 cut(s) 1117
BsrFI RCCGGY 2 cut(s) 826, 1876
BsrI ACTGG 5 cut(s) 613, 753, 972, 1296, 1620
BssAI RCCGGY 2 cut(s) 826, 1876
BssECI CCNNGG 5 cut(s) 46, 511, 1070, 1185, 1482
BssNI GRCGYC 2 cut(s) 507, 795
BssT1I CCWWGG 1 cut(s) 1185
Bst2UI CCWGG 3 cut(s) 48, 279, 1678
Bst4CI ACNGT 2 cut(s) 992, 1589
Bst6I CTCTTC 1 cut(s) 351
BstACI GRCGYC 2 cut(s) 507, 795
BstBI TTCGAA 2 cut(s) 174, 675
BstC8I GCNNGC 2 cut(s) 828, 873
BstDEI CTNAG 4 cut(s) 206, 911, 1209, 1477
BstDSI CCRYGG 1 cut(s) 1070
BstF5I GGATG 4 cut(s) 475, 589, 607, 1438
BstFNI CGCG 1 cut(s) 1072
BstH2I RGCGCY 1 cut(s) 1296
BstHHI GCGC 1 cut(s) 1295
BstMAI GTCTC 3 cut(s) 111, 344, 786
BstMCI CGRYCG 1 cut(s) 1804
BstMWI GCNNNNNNNGC 2 cut(s) 872, 1292
BstNI CCWGG 3 cut(s) 48, 279, 1678
BstNSI RCATGY 1 cut(s) 1845
BstSCI CCNGG 7 cut(s) 46, 277, 511, 597, 725, 1676, 1714
BstSFI CTRYAG 1 cut(s) 618
BstUI CGCG 1 cut(s) 1072
BstV1I GCAGC 4 cut(s) 810, 951, 1778, 1793
BstV2I GAAGAC 1 cut(s) 266
BstX2I RGATCY 2 cut(s) 487, 810
BstXI CCANNNNNNTGG 1 cut(s) 1025
BstYI RGATCY 2 cut(s) 487, 810
Bsu15I ATCGAT 3 cut(s) 97, 113, 414
Bsu36I CCTNAGG 1 cut(s) 206
BsuRI GGCC 3 cut(s) 258, 830, 1741
BsuTUI ATCGAT 3 cut(s) 97, 113, 414
BtgI CCRYGG 1 cut(s) 1070
BtgZI GCGATG 1 cut(s) 564
BtsCI GGATG 4 cut(s) 475, 589, 607, 1438
BtsI GCAGTG 2 cut(s) 568, 1924
BtsIMutI CAGTG 4 cut(s) 568, 1303, 1585, 1924
BveI ACCTGC 1 cut(s) 293
Cac8I GCNNGC 2 cut(s) 828, 873
CaiI CAGNNNCTG 2 cut(s) 140, 1357
CciI TCATGA 2 cut(s) 1495, 1689
CfoI GCGC 1 cut(s) 1295
Cfr10I RCCGGY 2 cut(s) 826, 1876
Cfr13I GGNCC 5 cut(s) 256, 614, 767, 1028, 1592
Cfr42I CCGCGG 1 cut(s) 1073
ClaI ATCGAT 3 cut(s) 97, 113, 414
CseI GACGC 2 cut(s) 496, 803
Csp6I GTAC 2 cut(s) 240, 762
CviAII CATG 9 cut(s) 124, 253, 819, 867, 1019, 1338, 1496, 1690, 1842
CviQI GTAC 2 cut(s) 240, 762
DdeI CTNAG 4 cut(s) 206, 911, 1209, 1477
EaeI YGGCCR 1 cut(s) 828
Eam1104I CTCTTC 1 cut(s) 351
EarI CTCTTC 1 cut(s) 351
EciI GGCGGA 1 cut(s) 672
Ecl136II GAGCTC 3 cut(s) 79, 595, 1213
Eco130I CCWWGG 1 cut(s) 1185
Eco147I AGGCCT 1 cut(s) 1741
Eco24I GRGCYC 3 cut(s) 81, 597, 1215
Eco31I GGTCTC 1 cut(s) 111
Eco47I GGWCC 4 cut(s) 614, 767, 1028, 1592
Eco53kI GAGCTC 3 cut(s) 79, 595, 1213
Eco57I CTGAAG 2 cut(s) 243, 318
Eco81I CCTNAGG 1 cut(s) 206
Eco88I CYCGRG 1 cut(s) 16
EcoICRI GAGCTC 3 cut(s) 79, 595, 1213
EcoRI GAATTC 1 cut(s) 677
EcoRII CCWGG 3 cut(s) 46, 277, 1676
EcoT14I CCWWGG 1 cut(s) 1185
EcoT22I ATGCAT 1 cut(s) 1751
EcoT38I GRGCYC 3 cut(s) 81, 597, 1215
ErhI CCWWGG 1 cut(s) 1185
FaeI CATG 9 cut(s) 127, 256, 822, 870, 1022, 1341, 1499, 1693, 1845
FaqI GGGAC 3 cut(s) 494, 753, 1014
FatI CATG 9 cut(s) 123, 252, 818, 866, 1018, 1337, 1495, 1689, 1841
FauI CCCGC 1 cut(s) 864
FbaI TGATCA 1 cut(s) 85
FblI GTMKAC 1 cut(s) 1126
Fnu4HI GCNGC 5 cut(s) 824, 916, 940, 1767, 1807
FokI GGATG 4 cut(s) 482, 596, 614, 1445
FriOI GRGCYC 3 cut(s) 81, 597, 1215
Fsp4HI GCNGC 5 cut(s) 824, 916, 940, 1767, 1807
FspBI CTAG 2 cut(s) 1176, 1626
GlaI GCGC 1 cut(s) 1294
GluI GCNGC 5 cut(s) 824, 916, 940, 1767, 1807
GsaI CCCAGC 1 cut(s) 774
GsuI CTGGAG 4 cut(s) 69, 407, 732, 955
HaeII RGCGCY 1 cut(s) 1296
HaeIII GGCC 3 cut(s) 258, 830, 1741
HgaI GACGC 2 cut(s) 496, 803
HhaI GCGC 1 cut(s) 1295
Hin1I GRCGYC 2 cut(s) 507, 795
Hin1II CATG 9 cut(s) 127, 256, 822, 870, 1022, 1341, 1499, 1693, 1845
Hin6I GCGC 1 cut(s) 1293
HinP1I GCGC 1 cut(s) 1293
HincII GTYRAC 3 cut(s) 670, 694, 1531
HindII GTYRAC 3 cut(s) 670, 694, 1531
HindIII AAGCTT 2 cut(s) 225, 517
HphI GGTGA 4 cut(s) 451, 545, 1459, 1660
Hpy166II GTNNAC 8 cut(s) 614, 670, 694, 1127, 1320, 1399, 1531, 1592
Hpy188III TCNNGA 8 cut(s) 16, 320, 785, 808, 1496, 1600, 1669, 1690
Hpy8I GTNNAC 8 cut(s) 614, 670, 694, 1127, 1320, 1399, 1531, 1592
Hpy99I CGWCG 2 cut(s) 797, 809
HpyAV CCTTC 7 cut(s) 398, 436, 1215, 1339, 1648, 1710, 1825
HpyCH4III ACNGT 2 cut(s) 992, 1589
HpyCH4IV ACGT 1 cut(s) 1851
HpyCH4V TGCA 9 cut(s) 573, 644, 861, 1110, 1173, 1505, 1550, 1749, 1766
HpyF10VI GCNNNNNNNGC 2 cut(s) 872, 1292
HpyF3I CTNAG 4 cut(s) 206, 911, 1209, 1477
HpySE526I ACGT 1 cut(s) 1851
Hsp92I GRCGYC 2 cut(s) 507, 795
Hsp92II CATG 9 cut(s) 127, 256, 822, 870, 1022, 1341, 1499, 1693, 1845
HspAI GCGC 1 cut(s) 1293
KpnI GGTACC 1 cut(s) 765
KroI GCCGGC 1 cut(s) 826
KroNI GCCGGC 1 cut(s) 828
Ksp22I TGATCA 1 cut(s) 85
KspI CCGCGG 1 cut(s) 1073
LmnI GCTCC 8 cut(s) 50, 76, 382, 600, 683, 722, 779, 846
Lsp1109I GCAGC 4 cut(s) 810, 951, 1778, 1793
LweI GCATC 4 cut(s) 299, 582, 592, 927
MaeI CTAG 2 cut(s) 1176, 1626
MaeII ACGT 1 cut(s) 1851
MaeIII GTNAC 2 cut(s) 1191, 1852
MboII GAAGA 6 cut(s) 197, 200, 203, 266, 368, 413
MfeI CAATTG 1 cut(s) 1861
MflI RGATCY 2 cut(s) 487, 810
MhlI GDGCHC 3 cut(s) 81, 597, 1215
MlyI GAGTC 3 cut(s) 70, 788, 1674
MmeI TCCRAC 1 cut(s) 1537
Mph1103I ATGCAT 1 cut(s) 1751
MroNI GCCGGC 1 cut(s) 826
MseI TTAA 5 cut(s) 68, 1268, 1421, 1577, 1910
MslI CAYNNNNRTG 1 cut(s) 1023
MspA1I CMGCKG 1 cut(s) 1072
MspR9I CCNGG 7 cut(s) 48, 279, 513, 599, 727, 1678, 1716
MunI CAATTG 1 cut(s) 1861
Mva1269I GAATGC 2 cut(s) 264, 1505
MvaI CCWGG 3 cut(s) 48, 279, 1678
MvnI CGCG 1 cut(s) 1072
MwoI GCNNNNNNNGC 2 cut(s) 872, 1292
NaeI GCCGGC 1 cut(s) 828
NciI CCSGG 4 cut(s) 513, 599, 727, 1716
NgoMIV GCCGGC 1 cut(s) 826
NlaIII CATG 9 cut(s) 127, 256, 822, 870, 1022, 1341, 1499, 1693, 1845
NlaIV GGNNCC 8 cut(s) 132, 489, 724, 763, 769, 1030, 1200, 1594
NmeAIII GCCGAG 1 cut(s) 1507
NsiI ATGCAT 1 cut(s) 1751
NspI RCATGY 1 cut(s) 1845
NspV TTCGAA 2 cut(s) 174, 675
PagI TCATGA 2 cut(s) 1495, 1689
PceI AGGCCT 1 cut(s) 1741
PciI ACATGT 1 cut(s) 1841
PcsI WCGNNNNNNNCGW 2 cut(s) 672, 801
PctI GAATGC 2 cut(s) 264, 1505
PdiI GCCGGC 1 cut(s) 828
PflFI GACNNNGTC 1 cut(s) 797
PflMI CCANNNNNTGG 2 cut(s) 140, 253
PfoI TCCNGGA 2 cut(s) 597, 1676
PkrI GCNGC 5 cut(s) 825, 917, 941, 1768, 1808
Ple19I CGATCG 1 cut(s) 1804
PleI GAGTC 3 cut(s) 69, 787, 1673
PpsI GAGTC 3 cut(s) 69, 787, 1673
PscI ACATGT 1 cut(s) 1841
Psp124BI GAGCTC 3 cut(s) 81, 597, 1215
Psp1406I AACGTT 1 cut(s) 1851
Psp6I CCWGG 3 cut(s) 46, 277, 1676
PspFI CCCAGC 1 cut(s) 770
PspGI CCWGG 3 cut(s) 46, 277, 1676
PspN4I GGNNCC 8 cut(s) 132, 489, 724, 763, 769, 1030, 1200, 1594
PspPI GGNCC 5 cut(s) 256, 614, 767, 1028, 1592
PstNI CAGNNNCTG 2 cut(s) 140, 1357
PsuI RGATCY 2 cut(s) 487, 810
PsyI GACNNNGTC 1 cut(s) 797
PvuI CGATCG 1 cut(s) 1804
RsaI GTAC 2 cut(s) 241, 763
RsaNI GTAC 2 cut(s) 240, 762
RseI CAYNNNNRTG 1 cut(s) 1023
SacI GAGCTC 3 cut(s) 81, 597, 1215
SacII CCGCGG 1 cut(s) 1073
SaqAI TTAA 5 cut(s) 68, 1268, 1421, 1577, 1910
SatI GCNGC 5 cut(s) 824, 916, 940, 1767, 1807
Sau96I GGNCC 5 cut(s) 256, 614, 767, 1028, 1592
SchI GAGTC 3 cut(s) 70, 788, 1674
ScrFI CCNGG 7 cut(s) 48, 279, 513, 599, 727, 1678, 1716
SduI GDGCHC 3 cut(s) 81, 597, 1215
SfaNI GCATC 4 cut(s) 299, 582, 592, 927
SfcI CTRYAG 1 cut(s) 618
Sfr303I CCGCGG 1 cut(s) 1073
SfuI TTCGAA 2 cut(s) 174, 675
SgrBI CCGCGG 1 cut(s) 1073
SinI GGWCC 4 cut(s) 614, 767, 1028, 1592
SmiMI CAYNNNNRTG 1 cut(s) 1023
SseBI AGGCCT 1 cut(s) 1741
SsiI CCGC 9 cut(s) 152, 262, 557, 657, 704, 871, 916, 1070, 1072
SspI AATATT 1 cut(s) 1564
SspMI CTAG 2 cut(s) 1176, 1626
SstI GAGCTC 3 cut(s) 81, 597, 1215
StuI AGGCCT 1 cut(s) 1741
StyD4I CCNGG 7 cut(s) 46, 277, 511, 597, 725, 1676, 1714
StyI CCWWGG 1 cut(s) 1185
TaaI ACNGT 2 cut(s) 992, 1589
TaiI ACGT 1 cut(s) 1854
TaqII GACCGA 1 cut(s) 260
TauI GCSGC 1 cut(s) 918
Tru1I TTAA 5 cut(s) 68, 1268, 1421, 1577, 1910
Tru9I TTAA 5 cut(s) 68, 1268, 1421, 1577, 1910
TscAI CASTG 4 cut(s) 575, 1303, 1592, 1924
TseI GCWGC 4 cut(s) 823, 939, 1766, 1806
TspGWI ACGGA 1 cut(s) 711
TspRI CASTG 4 cut(s) 575, 1303, 1592, 1924
Tth111I GACNNNGTC 1 cut(s) 797
Van91I CCANNNNNTGG 2 cut(s) 140, 253
VpaK11BI GGWCC 4 cut(s) 614, 767, 1028, 1592
XapI RAATTY 6 cut(s) 421, 677, 1079, 1366, 1490, 1570
XceI RCATGY 1 cut(s) 1845
XmiI GTMKAC 1 cut(s) 1126
XspI CTAG 2 cut(s) 1176, 1626
Zsp2I ATGCAT 1 cut(s) 1751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.