Rroxscaffold_2G00094230

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000113
Physical Location & Seq
Forward (+)
15553219 .. 15555157
1939 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094230.1

Sequence Viewer

Length: 1236 bp
ATGGGGGACGTCGATGTCGTGCTTAAGCGAGCTCATACCAACTTGGGCGACTATGAGGAAGATGTGATTGCGGAGATCCTCGCAAGGCTACCGGTCAAATCCTTGATTCGATTCCGGTGCGTCTGCAAGTCATGGCGTGCTTTGATCTCCGATTCCTATTTTGTAAAGAAACACCTCAGCTACGGAGAGAGAGGCATCACCAAAAGCACTTACGAGCTCATCATTTTCATGGAGGATGATGTCTCGTCGTTGGAAATCCTAGCCTTGAAAAATATCAAGGATGATGATGATGATGGCGATGGCGCTGCGGGTGGTCAGTTTGCAGTCACTCAGCTGGATTGTCCGGTAACAAAAACTATCACTTATTCCCGTCATAGAATTCTTGTTGGTTCTTGCAATGGCTTGGTATGCGTAGAACTTGACTTGGAGGCTATTATGTTATGGAACCCTTGCACTAGAGACTCCAAGGGTTTACCAAAACCTCCTCCAGTTATAAACTCCAAGTTTAGCTACTGCTTTTATGGACTCGGGCATGATTCTGCTAGTGACGACTACAAGGTGATACGGGGGTTCACTGATTTTGCTAAGAAAATCATGATTCACATCTTTTCACTGAAAGCAGGTTCATGGAGGACTGTCGAAGACATTGATTATGTTAGATCAATAAGGGGGCAGGGGTTGTTCTTAAATGGAGCTCTGCATTGGTTATATAGTCTACCTGAAGGGGGCTCAAGAATTTTGTCTTTTGATTTAGGGGCAGAGAAATTTCAGAAGACGATCCCATTACCCTATGATGACTGGTTTCGTGATCCCTTGATTCATAAAAATTGTCTCTGTGTACTTACTTGTCCAACTGGGACCAACAATTTCAACATATGGATGATGAAGGAATATGGGGTCAAGGAATCCTGGACTGAAGTCTTACATTTTTCATTGTTTGACGATGCAGAGTATTTTGATGATAATACAAAATATTTCAGGCCTGTGTGCATGTTAGAGAATGGTGTAGTTTTGATTGACGAGATGGGTATGTGTGAAGACCTCTTGGTATTATCTAATCTAAAGGAGAAGACATTCAAGCATGTTGTTGAGGTCGCAACGAGCTTGGACATTAGAACGGTCATTTACCGAGAGACATTAGTTTCACCAGACGTCCACACATACAAAACCAACACTTTTTGTCACAGTTTAGCTATGTACAAGGCAGACTCCAGGTTCCAGCATTATGTCCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

411

Amino Acids

46.91

Weight (kDa)

5.59

Isoelectric Point (pI)

31.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 56 1.2e-10 F-box domain
F-box-like PF12937 21 - 54 4.4e-07 F-box-like
FBA_3 PF08268 116 - 362 6.3e-25 F-box associated beta propeller domain
FBA_1 PF07734 129 - 330 3.5e-29 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 494
AasI GACNNNNNNGTC 1 cut(s) 14
AatII GACGTC 2 cut(s) 12, 1155
Acc36I ACCTGC 1 cut(s) 611
AccI GTMKAC 1 cut(s) 715
AciI CCGC 2 cut(s) 71, 308
AclWI GGATC 3 cut(s) 70, 772, 803
AcsI RAATTY 3 cut(s) 378, 735, 764
AcuI CTGAAG 2 cut(s) 741, 936
AcyI GRCGYC 2 cut(s) 9, 1152
AfaI GTAC 2 cut(s) 840, 1199
AfiI CCNNNNNNNGG 1 cut(s) 725
AflII CTTAAG 1 cut(s) 23
AgeI ACCGGT 1 cut(s) 91
AgsI TTSAA 3 cut(s) 268, 871, 1078
AjnI CCWGG 2 cut(s) 908, 1211
AluBI AGCT 8 cut(s) 32, 180, 217, 334, 510, 695, 1104, 1193
AluI AGCT 8 cut(s) 32, 180, 217, 334, 510, 695, 1104, 1193
Alw21I GWGCWC 3 cut(s) 34, 219, 697
Alw26I GTCTC 4 cut(s) 247, 453, 836, 1127
AlwI GGATC 3 cut(s) 70, 772, 803
Ama87I CYCGRG 1 cut(s) 527
AoxI GGCC 1 cut(s) 980
ApeKI GCWGC 1 cut(s) 305
ApoI RAATTY 3 cut(s) 378, 735, 764
AsiGI ACCGGT 1 cut(s) 91
Asp700I GAANNNNTTC 1 cut(s) 1073
AspLEI GCGC 1 cut(s) 305
AspS9I GGNCC 1 cut(s) 858
AsuHPI GGTGA 3 cut(s) 190, 571, 1137
AvaI CYCGRG 1 cut(s) 527
AvaII GGWCC 1 cut(s) 858
BaeI ACNNNNGTAYC 2 cut(s) 554, 587
BanII GRGCYC 4 cut(s) 34, 219, 697, 731
BbsI GAAGAC 4 cut(s) 648, 779, 1044, 1076
Bbv12I GWGCWC 3 cut(s) 34, 219, 697
BbvCI CCTCAGC 1 cut(s) 176
BbvI GCAGC 1 cut(s) 292
BccI CCATC 3 cut(s) 287, 293, 1018
BcgI CGANNNNNNTGC 4 cut(s) 99, 133, 287, 321
BciT130I CCWGG 2 cut(s) 910, 1213
BcoDI GTCTC 4 cut(s) 247, 453, 836, 1127
BfaI CTAG 3 cut(s) 260, 456, 543
BfoI RGCGCY 1 cut(s) 306
BfrI CTTAAG 1 cut(s) 23
BfuAI ACCTGC 1 cut(s) 611
BisI GCNGC 1 cut(s) 306
BlsI GCNGC 1 cut(s) 307
Bme1390I CCNGG 2 cut(s) 910, 1213
Bme18I GGWCC 1 cut(s) 858
BmeT110I CYCGRG 1 cut(s) 527
BmgT120I GGNCC 1 cut(s) 858
BmiI GGNNCC 3 cut(s) 446, 859, 1217
BmrFI CCNGG 2 cut(s) 910, 1213
BmrI ACTGGG 1 cut(s) 864
BmsI GCATC 2 cut(s) 204, 934
BmuI ACTGGG 1 cut(s) 864
BoxI GACNNNNGTC 1 cut(s) 917
BpiI GAAGAC 4 cut(s) 648, 779, 1044, 1076
BpmI CTGGAG 2 cut(s) 471, 1195
Bpu10I CCTNAGC 1 cut(s) 176
BpuEI CTTGAG 1 cut(s) 715
BsaBI GATNNNNATC 1 cut(s) 602
BsaHI GRCGYC 2 cut(s) 9, 1152
BsaJI CCNNGG 1 cut(s) 465
BsaWI WCCGGW 3 cut(s) 91, 114, 343
Bsc4I CCNNNNNNNGG 1 cut(s) 725
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 4 cut(s) 488, 803, 859, 1231
Bse3DI GCAATG 1 cut(s) 403
Bse8I GATNNNNATC 1 cut(s) 602
BseBI CCWGG 2 cut(s) 910, 1213
BseDI CCNNGG 1 cut(s) 465
BseGI GGATG 3 cut(s) 241, 286, 885
BseJI GATNNNNATC 1 cut(s) 602
BseLI CCNNNNNNNGG 1 cut(s) 725
BseMI GCAATG 1 cut(s) 403
BseMII CTCAG 2 cut(s) 190, 344
BseNI ACTGG 4 cut(s) 488, 803, 859, 1231
BseRI GAGGAG 1 cut(s) 474
BseXI GCAGC 1 cut(s) 292
BshFI GGCC 1 cut(s) 982
BshTI ACCGGT 1 cut(s) 91
BsiHKAI GWGCWC 3 cut(s) 34, 219, 697
BsiHKCI CYCGRG 1 cut(s) 527
BsiSI CCGG 3 cut(s) 92, 115, 344
BslFI GGGAC 2 cut(s) 20, 871
BslI CCNNNNNNNGG 1 cut(s) 725
BsmAI GTCTC 4 cut(s) 247, 453, 836, 1127
BsmFI GGGAC 2 cut(s) 20, 871
BsnI GGCC 1 cut(s) 982
BsoBI CYCGRG 1 cut(s) 527
Bsp1286I GDGCHC 4 cut(s) 34, 219, 697, 731
Bsp1407I TGTACA 1 cut(s) 1197
Bsp143I GATC 5 cut(s) 75, 144, 659, 777, 808
BspACI CCGC 2 cut(s) 71, 308
BspANI GGCC 1 cut(s) 982
BspCNI CTCAG 2 cut(s) 189, 343
BspHI TCATGA 1 cut(s) 594
BspLI GGNNCC 3 cut(s) 446, 859, 1217
BspMI ACCTGC 1 cut(s) 611
BspPI GGATC 3 cut(s) 70, 772, 803
BspTI CTTAAG 1 cut(s) 23
BsrDI GCAATG 1 cut(s) 403
BsrFI RCCGGY 1 cut(s) 91
BsrGI TGTACA 1 cut(s) 1197
BsrI ACTGG 4 cut(s) 488, 803, 859, 1231
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 1 cut(s) 465
BssMI GATC 5 cut(s) 75, 144, 659, 777, 808
BssNI GRCGYC 2 cut(s) 9, 1152
BssT1I CCWWGG 1 cut(s) 465
Bst2UI CCWGG 2 cut(s) 910, 1213
Bst4CI ACNGT 3 cut(s) 637, 1120, 1187
BstACI GRCGYC 2 cut(s) 9, 1152
BstAFI CTTAAG 1 cut(s) 23
BstAUI TGTACA 1 cut(s) 1197
BstC8I GCNNGC 2 cut(s) 30, 138
BstDEI CTNAG 3 cut(s) 176, 330, 585
BstF5I GGATG 3 cut(s) 241, 286, 885
BstH2I RGCGCY 1 cut(s) 306
BstHHI GCGC 1 cut(s) 305
BstKTI GATC 5 cut(s) 78, 147, 662, 780, 811
BstMAI GTCTC 4 cut(s) 247, 453, 836, 1127
BstMBI GATC 5 cut(s) 75, 144, 659, 777, 808
BstMWI GCNNNNNNNGC 1 cut(s) 408
BstNI CCWGG 2 cut(s) 910, 1213
BstNSI RCATGY 2 cut(s) 994, 1085
BstPAI GACNNNNGTC 1 cut(s) 917
BstSCI CCNGG 2 cut(s) 908, 1211
BstV1I GCAGC 1 cut(s) 292
BstV2I GAAGAC 4 cut(s) 648, 779, 1044, 1076
BstX2I RGATCY 1 cut(s) 75
BstYI RGATCY 1 cut(s) 75
BsuRI GGCC 1 cut(s) 982
BtgZI GCGATG 1 cut(s) 312
BtsCI GGATG 3 cut(s) 241, 286, 885
BtsIMutI CAGTG 2 cut(s) 573, 611
BveI ACCTGC 1 cut(s) 611
Cac8I GCNNGC 2 cut(s) 30, 138
CciI TCATGA 1 cut(s) 594
CfoI GCGC 1 cut(s) 305
Cfr10I RCCGGY 1 cut(s) 91
Cfr13I GGNCC 1 cut(s) 858
CseI GACGC 1 cut(s) 109
Csp6I GTAC 2 cut(s) 839, 1198
CspAI ACCGGT 1 cut(s) 91
CviAII CATG 7 cut(s) 132, 229, 533, 595, 627, 991, 1082
CviQI GTAC 2 cut(s) 839, 1198
DdeI CTNAG 3 cut(s) 176, 330, 585
DpnI GATC 5 cut(s) 77, 146, 661, 779, 810
DpnII GATC 5 cut(s) 75, 144, 659, 777, 808
DrdI GACNNNNNNGTC 1 cut(s) 14
DseDI GACNNNNNNGTC 1 cut(s) 14
Ecl136II GAGCTC 3 cut(s) 32, 217, 695
Eco130I CCWWGG 1 cut(s) 465
Eco147I AGGCCT 1 cut(s) 982
Eco24I GRGCYC 4 cut(s) 34, 219, 697, 731
Eco47I GGWCC 1 cut(s) 858
Eco53kI GAGCTC 3 cut(s) 32, 217, 695
Eco57I CTGAAG 2 cut(s) 741, 936
Eco88I CYCGRG 1 cut(s) 527
EcoICRI GAGCTC 3 cut(s) 32, 217, 695
EcoRI GAATTC 1 cut(s) 378
EcoRII CCWGG 2 cut(s) 908, 1211
EcoT14I CCWWGG 1 cut(s) 465
EcoT38I GRGCYC 4 cut(s) 34, 219, 697, 731
ErhI CCWWGG 1 cut(s) 465
FaeI CATG 7 cut(s) 135, 232, 536, 598, 630, 994, 1085
FaqI GGGAC 2 cut(s) 20, 871
FatI CATG 7 cut(s) 131, 228, 532, 594, 626, 990, 1081
FauI CCCGC 1 cut(s) 301
FauNDI CATATG 1 cut(s) 875
FblI GTMKAC 1 cut(s) 715
Fnu4HI GCNGC 1 cut(s) 306
FokI GGATG 3 cut(s) 248, 293, 892
FriOI GRGCYC 4 cut(s) 34, 219, 697, 731
Fsp4HI GCNGC 1 cut(s) 306
FspBI CTAG 3 cut(s) 260, 456, 543
GlaI GCGC 1 cut(s) 304
GluI GCNGC 1 cut(s) 306
GsuI CTGGAG 2 cut(s) 471, 1195
HaeII RGCGCY 1 cut(s) 306
HaeIII GGCC 1 cut(s) 982
HapII CCGG 3 cut(s) 92, 115, 344
HgaI GACGC 1 cut(s) 109
HhaI GCGC 1 cut(s) 305
Hin1I GRCGYC 2 cut(s) 9, 1152
Hin1II CATG 7 cut(s) 135, 232, 536, 598, 630, 994, 1085
Hin6I GCGC 1 cut(s) 303
HinP1I GCGC 1 cut(s) 303
HpaII CCGG 3 cut(s) 92, 115, 344
HphI GGTGA 3 cut(s) 190, 571, 1137
Hpy166II GTNNAC 5 cut(s) 473, 573, 716, 839, 1156
Hpy188I TCNGA 2 cut(s) 151, 771
Hpy188III TCNNGA 3 cut(s) 595, 732, 806
Hpy8I GTNNAC 5 cut(s) 473, 573, 716, 839, 1156
Hpy99I CGWCG 2 cut(s) 14, 250
HpyAV CCTTC 2 cut(s) 716, 880
HpyCH4III ACNGT 3 cut(s) 637, 1120, 1187
HpyCH4IV ACGT 2 cut(s) 9, 1152
HpyCH4V TGCA 7 cut(s) 126, 323, 396, 453, 700, 947, 990
HpyF10VI GCNNNNNNNGC 1 cut(s) 408
HpyF3I CTNAG 3 cut(s) 176, 330, 585
HpySE526I ACGT 2 cut(s) 9, 1152
Hsp92I GRCGYC 2 cut(s) 9, 1152
Hsp92II CATG 7 cut(s) 135, 232, 536, 598, 630, 994, 1085
HspAI GCGC 1 cut(s) 303
Kzo9I GATC 5 cut(s) 75, 144, 659, 777, 808
LmnI GCTCC 1 cut(s) 692
Lsp1109I GCAGC 1 cut(s) 292
LweI GCATC 2 cut(s) 204, 934
MaeI CTAG 3 cut(s) 260, 456, 543
MaeII ACGT 2 cut(s) 9, 1152
MaeIII GTNAC 4 cut(s) 325, 346, 545, 1181
MalI GATC 5 cut(s) 77, 146, 661, 779, 810
MboI GATC 5 cut(s) 75, 144, 659, 777, 808
MboII GAAGA 5 cut(s) 71, 653, 784, 1049, 1081
MflI RGATCY 1 cut(s) 75
MhlI GDGCHC 4 cut(s) 34, 219, 697, 731
MluCI AATT 5 cut(s) 378, 735, 764, 826, 865
MlyI GAGTC 3 cut(s) 455, 519, 1202
MmeI TCCRAC 2 cut(s) 231, 875
MroXI GAANNNNTTC 1 cut(s) 1073
MseI TTAA 2 cut(s) 24, 686
MslI CAYNNNNRTG 2 cut(s) 227, 878
MspA1I CMGCKG 1 cut(s) 334
MspCI CTTAAG 1 cut(s) 23
MspI CCGG 3 cut(s) 92, 115, 344
MspR9I CCNGG 2 cut(s) 910, 1213
MvaI CCWGG 2 cut(s) 910, 1213
MwoI GCNNNNNNNGC 1 cut(s) 408
NdeI CATATG 1 cut(s) 875
NdeII GATC 5 cut(s) 75, 144, 659, 777, 808
NlaIII CATG 7 cut(s) 135, 232, 536, 598, 630, 994, 1085
NlaIV GGNNCC 3 cut(s) 446, 859, 1217
NmuCI GTSAC 3 cut(s) 325, 545, 1181
NspI RCATGY 2 cut(s) 994, 1085
PagI TCATGA 1 cut(s) 594
PceI AGGCCT 1 cut(s) 982
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PdmI GAANNNNTTC 1 cut(s) 1073
PfeI GAWTC 7 cut(s) 106, 111, 152, 536, 598, 817, 905
PfoI TCCNGGA 1 cut(s) 908
PinAI ACCGGT 1 cut(s) 91
PkrI GCNGC 1 cut(s) 307
PleI GAGTC 3 cut(s) 455, 519, 1202
PpsI GAGTC 3 cut(s) 455, 519, 1202
PshAI GACNNNNGTC 1 cut(s) 917
PsiI TTATAA 1 cut(s) 494
Psp124BI GAGCTC 3 cut(s) 34, 219, 697
Psp6I CCWGG 2 cut(s) 908, 1211
PspGI CCWGG 2 cut(s) 908, 1211
PspN4I GGNNCC 3 cut(s) 446, 859, 1217
PspPI GGNCC 1 cut(s) 858
PsuI RGATCY 1 cut(s) 75
PvuII CAGCTG 1 cut(s) 334
RsaI GTAC 2 cut(s) 840, 1199
RsaNI GTAC 2 cut(s) 839, 1198
RseI CAYNNNNRTG 2 cut(s) 227, 878
SacI GAGCTC 3 cut(s) 34, 219, 697
SaqAI TTAA 2 cut(s) 24, 686
SatI GCNGC 1 cut(s) 306
Sau3AI GATC 5 cut(s) 75, 144, 659, 777, 808
Sau96I GGNCC 1 cut(s) 858
SchI GAGTC 3 cut(s) 455, 519, 1202
ScrFI CCNGG 2 cut(s) 910, 1213
SduI GDGCHC 4 cut(s) 34, 219, 697, 731
SfaNI GCATC 2 cut(s) 204, 934
SinI GGWCC 1 cut(s) 858
SmiMI CAYNNNNRTG 2 cut(s) 227, 878
SmlI CTYRAG 2 cut(s) 23, 730
SmoI CTYRAG 2 cut(s) 23, 730
Sse9I AATT 5 cut(s) 378, 735, 764, 826, 865
SseBI AGGCCT 1 cut(s) 982
SsiI CCGC 2 cut(s) 71, 308
SspI AATATT 1 cut(s) 974
SspMI CTAG 3 cut(s) 260, 456, 543
SstI GAGCTC 3 cut(s) 34, 219, 697
StuI AGGCCT 1 cut(s) 982
StyD4I CCNGG 2 cut(s) 908, 1211
StyI CCWWGG 1 cut(s) 465
TaaI ACNGT 3 cut(s) 637, 1120, 1187
TaiI ACGT 2 cut(s) 12, 1155
TaqI TCGA 3 cut(s) 12, 109, 639
TasI AATT 5 cut(s) 378, 735, 764, 826, 865
TatI WGTACW 2 cut(s) 838, 1197
TfiI GAWTC 7 cut(s) 106, 111, 152, 536, 598, 817, 905
Tru1I TTAA 2 cut(s) 24, 686
Tru9I TTAA 2 cut(s) 24, 686
TscAI CASTG 2 cut(s) 580, 618
TseFI GTSAC 3 cut(s) 325, 545, 1181
TseI GCWGC 1 cut(s) 305
Tsp45I GTSAC 3 cut(s) 325, 545, 1181
TspDTI ATGAA 5 cut(s) 217, 615, 809, 899, 921
TspGWI ACGGA 1 cut(s) 198
TspRI CASTG 2 cut(s) 580, 618
Vha464I CTTAAG 1 cut(s) 23
VpaK11BI GGWCC 1 cut(s) 858
XapI RAATTY 3 cut(s) 378, 735, 764
XceI RCATGY 2 cut(s) 994, 1085
XmiI GTMKAC 1 cut(s) 715
XmnI GAANNNNTTC 1 cut(s) 1073
XspI CTAG 3 cut(s) 260, 456, 543
ZraI GACGTC 2 cut(s) 10, 1153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.