Rroxscaffold_2G00094220

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000113
Physical Location & Seq
Forward (+)
15550163 .. 15551389
1227 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094220.1

Sequence Viewer

Length: 1227 bp
ATGGCGGACGGTCAGCAGCAACTCGTTCTCTCCGATTCCCATGACTTGAATGCTATCATCGTTGAGATCCTCTTGAGGCTGCCGGCTAAATCTTTAGTCCGATTCCGGTGCGTATCCAAGGCCTGGCGGGACTTGATCTCGGAATCTTATTTCATCAAAAATCACCTCTCCCACATCGACACCAAAAACATCCTCAACTCGAAGCTCCTTCTCTCAACCACTCCTCCCCAAGCCATAGACTACGCAGCACTATCCAACATCGCTAGTTCCAATGAGGAAGATGATGACCCAGTTGCAAGCAGAGAGGTTGACTATCCGGTAATGGTAAATCCTAGGCATTTCTATTCGAAATGTTTCGTTGGTTCCTGCAATGGCCTGGTATGTTTGTTATTGGATGGCAATGTTGTGTTATGGAACCCTTGCACTAGAGTGATCCGGTCATTACCAAGTCCTACTCGTTTCAATAGGAGTTGTGCGTTTTATGGGTTCGGTTATGATTCCGCCACCGATGATTGCAAGATAGTAGTGGGAAGTTATAGGCCTCTTCCTGGAAGTGGTCACGGCTACCACTTGCAGCACGGGGAAGGTTTTGAGGAAACCATGATTGAGGTCTTTGCACTGAAAACTGGTTCTTGGAGGACCCTTGAGAGGCTTGATTTTGTTAGGTTGTTTTACCAGGGCTGCGTTGTAAATGGAGCTCTGCATTGGTTAAAGCATCAGCTGTCGGAGCATGGCTCAATGGTTTCGAATATAATGTGTTTTGATTTAGCGCAGGAGAAATTTCGGGAGTTTGCAGTCCCTTGTCCTCCGAATTATGTAGGGAGGAATTATTTCTTTGTGGGAATTGGAGCTATTAGGAACTGTCTGACTGTCTACTTTGAACCGAGAGAGGGGTTCGATTATAGAATGTGGGTGATGAAGGAGTATGGGGTCAAGCAATCTTGGGCTGAAATCATAAGAATTCCTTTTGAGGTTTTGCCTCAAGATTACGAGATGTGCTTGCAGCCTTTGTTCATTTTTGAGAACGATGAAGTTTTGATGAATATCAACGGGGACGTCTTGGCATTGTATAATCAGAAGAAAAATACATTTAGGAATGTCTTCAAGACTCATGTGGAGAATGGTTGGCGACAAACAACTAATATAGAAAGTTTAGTTTCACCATTGATCGGTGGTGCCCCAAACTTGTCAAACCAACACTGTGAGTCTTCCACTACATTTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

408

Amino Acids

46.47

Weight (kDa)

5.96

Isoelectric Point (pI)

46.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 52 2e-08 F-box domain
FBA_3 PF08268 101 - 374 9.8e-20 F-box associated beta propeller domain
FBA_1 PF07734 120 - 357 8.5e-27 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1059
AccB1I GGYRCC 1 cut(s) 1175
AccB7I CCANNNNNTGG 1 cut(s) 123
AccI GTMKAC 1 cut(s) 873
AciI CCGC 3 cut(s) 5, 127, 501
AclWI GGATC 2 cut(s) 61, 427
AcsI RAATTY 2 cut(s) 779, 960
AcyI GRCGYC 1 cut(s) 1056
AfiI CCNNNNNNNGG 6 cut(s) 123, 548, 554, 648, 890, 1169
AgsI TTSAA 4 cut(s) 49, 463, 881, 1105
AjnI CCWGG 4 cut(s) 122, 375, 547, 675
AleI CACNNNNGTG 1 cut(s) 428
AluBI AGCT 4 cut(s) 205, 698, 721, 851
AluI AGCT 4 cut(s) 205, 698, 721, 851
Alw21I GWGCWC 1 cut(s) 700
AlwI GGATC 2 cut(s) 61, 427
AoxI GGCC 3 cut(s) 120, 373, 539
ApeKI GCWGC 6 cut(s) 16, 79, 245, 574, 681, 1003
ApoI RAATTY 2 cut(s) 779, 960
Asp700I GAANNNNTTC 3 cut(s) 353, 830, 1100
AspA2I CCTAGG 1 cut(s) 332
AspLEI GCGC 1 cut(s) 772
AspS9I GGNCC 1 cut(s) 639
AsuHPI GGTGA 3 cut(s) 155, 925, 1152
AsuII TTCGAA 2 cut(s) 347, 746
AvaII GGWCC 1 cut(s) 639
AvrII CCTAGG 1 cut(s) 332
BaeGI GKGCMC 1 cut(s) 1180
BanI GGYRCC 1 cut(s) 1175
BanII GRGCYC 1 cut(s) 700
BbsI GAAGAC 2 cut(s) 1093, 1200
Bbv12I GWGCWC 1 cut(s) 700
BbvI GCAGC 6 cut(s) 28, 66, 257, 586, 668, 1015
BccI CCATC 1 cut(s) 389
BceAI ACGGC 1 cut(s) 577
BcgI CGANNNNNNTGC 2 cut(s) 90, 124
BciT130I CCWGG 4 cut(s) 124, 377, 549, 677
BciVI GTATCC 1 cut(s) 124
BfaI CTAG 3 cut(s) 264, 333, 426
BfuI GTATCC 1 cut(s) 124
BisI GCNGC 6 cut(s) 17, 80, 246, 575, 682, 1004
BlnI CCTAGG 1 cut(s) 332
BlsI GCNGC 6 cut(s) 18, 81, 247, 576, 683, 1005
Bme1390I CCNGG 4 cut(s) 124, 377, 549, 677
Bme18I GGWCC 1 cut(s) 639
BmgT120I GGNCC 1 cut(s) 639
BmiI GGNNCC 4 cut(s) 364, 416, 641, 1177
BmrFI CCNGG 4 cut(s) 124, 377, 549, 677
BmrI ACTGGG 1 cut(s) 284
BmsI GCATC 1 cut(s) 724
BmuI ACTGGG 1 cut(s) 284
BpiI GAAGAC 2 cut(s) 1093, 1200
BplI GAGNNNNNCTC 2 cut(s) 719, 751
Bpu14I TTCGAA 2 cut(s) 347, 746
BpuEI CTTGAG 3 cut(s) 94, 665, 966
BsaBI GATNNNNATC 1 cut(s) 1043
BsaHI GRCGYC 1 cut(s) 1056
BsaJI CCNNGG 3 cut(s) 117, 332, 676
BsaWI WCCGGW 3 cut(s) 105, 316, 435
BsaXI ACNNNNNCTCC 2 cut(s) 208, 238
Bsc4I CCNNNNNNNGG 6 cut(s) 123, 548, 554, 648, 890, 1169
Bse118I RCCGGY 1 cut(s) 82
Bse1I ACTGG 2 cut(s) 290, 631
Bse3DI GCAATG 2 cut(s) 376, 406
Bse8I GATNNNNATC 1 cut(s) 1043
BseBI CCWGG 4 cut(s) 124, 377, 549, 677
BseDI CCNNGG 3 cut(s) 117, 332, 676
BseGI GGATG 2 cut(s) 189, 400
BseJI GATNNNNATC 1 cut(s) 1043
BseLI CCNNNNNNNGG 6 cut(s) 123, 548, 554, 648, 890, 1169
BseMI GCAATG 2 cut(s) 376, 406
BseNI ACTGG 2 cut(s) 290, 631
BseRI GAGGAG 1 cut(s) 213
BseSI GKGCMC 1 cut(s) 1180
BseXI GCAGC 6 cut(s) 28, 66, 257, 586, 668, 1015
BshFI GGCC 3 cut(s) 122, 375, 541
BshNI GGYRCC 1 cut(s) 1175
BsiHKAI GWGCWC 1 cut(s) 700
BsiSI CCGG 4 cut(s) 83, 106, 317, 436
BslFI GGGAC 3 cut(s) 143, 782, 1067
BslI CCNNNNNNNGG 6 cut(s) 123, 548, 554, 648, 890, 1169
BsmFI GGGAC 3 cut(s) 143, 782, 1067
BsmI GAATGC 1 cut(s) 55
BsnI GGCC 3 cut(s) 122, 375, 541
Bsp119I TTCGAA 2 cut(s) 347, 746
Bsp1286I GDGCHC 2 cut(s) 700, 1180
Bsp143I GATC 4 cut(s) 66, 135, 432, 1167
BspACI CCGC 3 cut(s) 5, 127, 501
BspANI GGCC 3 cut(s) 122, 375, 541
BspLI GGNNCC 4 cut(s) 364, 416, 641, 1177
BspPI GGATC 2 cut(s) 61, 427
BspT104I TTCGAA 2 cut(s) 347, 746
BspT107I GGYRCC 1 cut(s) 1175
BsrDI GCAATG 2 cut(s) 376, 406
BsrFI RCCGGY 1 cut(s) 82
BsrI ACTGG 2 cut(s) 290, 631
BssAI RCCGGY 1 cut(s) 82
BssECI CCNNGG 3 cut(s) 117, 332, 676
BssMI GATC 4 cut(s) 66, 135, 432, 1167
BssNI GRCGYC 1 cut(s) 1056
BssT1I CCWWGG 2 cut(s) 117, 332
Bst2UI CCWGG 4 cut(s) 124, 377, 549, 677
Bst4CI ACNGT 4 cut(s) 11, 863, 871, 1202
Bst6I CTCTTC 1 cut(s) 549
BstACI GRCGYC 1 cut(s) 1056
BstBI TTCGAA 2 cut(s) 347, 746
BstC8I GCNNGC 3 cut(s) 84, 298, 1001
BstF5I GGATG 2 cut(s) 189, 400
BstHHI GCGC 1 cut(s) 772
BstKTI GATC 4 cut(s) 69, 138, 435, 1170
BstMBI GATC 4 cut(s) 66, 135, 432, 1167
BstMWI GCNNNNNNNGC 1 cut(s) 727
BstNI CCWGG 4 cut(s) 124, 377, 549, 677
BstSCI CCNGG 4 cut(s) 122, 375, 547, 675
BstSLI GKGCMC 1 cut(s) 1180
BstV1I GCAGC 6 cut(s) 28, 66, 257, 586, 668, 1015
BstV2I GAAGAC 2 cut(s) 1093, 1200
BstX2I RGATCY 1 cut(s) 66
BstYI RGATCY 1 cut(s) 66
BsuI GTATCC 1 cut(s) 124
BsuRI GGCC 3 cut(s) 122, 375, 541
BtgZI GCGATG 1 cut(s) 244
BtsCI GGATG 2 cut(s) 189, 400
BtsIMutI CAGTG 2 cut(s) 617, 1198
Cac8I GCNNGC 3 cut(s) 84, 298, 1001
CfoI GCGC 1 cut(s) 772
Cfr10I RCCGGY 1 cut(s) 82
Cfr13I GGNCC 1 cut(s) 639
CspCI CAANNNNNGTGG 1 cut(s) 1201
CviAII CATG 4 cut(s) 41, 601, 731, 1112
DpnI GATC 4 cut(s) 68, 137, 434, 1169
DpnII GATC 4 cut(s) 66, 135, 432, 1167
Eam1104I CTCTTC 1 cut(s) 549
EarI CTCTTC 1 cut(s) 549
EciI GGCGGA 2 cut(s) 20, 490
Ecl136II GAGCTC 1 cut(s) 698
Eco130I CCWWGG 2 cut(s) 117, 332
Eco147I AGGCCT 2 cut(s) 122, 541
Eco24I GRGCYC 1 cut(s) 700
Eco47I GGWCC 1 cut(s) 639
Eco53kI GAGCTC 1 cut(s) 698
EcoICRI GAGCTC 1 cut(s) 698
EcoO109I RGGNCCY 1 cut(s) 639
EcoRI GAATTC 1 cut(s) 960
EcoRII CCWGG 4 cut(s) 122, 375, 547, 675
EcoT14I CCWWGG 2 cut(s) 117, 332
EcoT38I GRGCYC 1 cut(s) 700
ErhI CCWWGG 2 cut(s) 117, 332
FaeI CATG 4 cut(s) 44, 604, 734, 1115
FalI AAGNNNNNCTT 2 cut(s) 949, 981
FaqI GGGAC 3 cut(s) 143, 782, 1067
FatI CATG 4 cut(s) 40, 600, 730, 1111
FauI CCCGC 1 cut(s) 120
FblI GTMKAC 1 cut(s) 873
Fnu4HI GCNGC 6 cut(s) 17, 80, 246, 575, 682, 1004
FokI GGATG 2 cut(s) 176, 407
FriOI GRGCYC 1 cut(s) 700
Fsp4HI GCNGC 6 cut(s) 17, 80, 246, 575, 682, 1004
FspBI CTAG 3 cut(s) 264, 333, 426
GlaI GCGC 1 cut(s) 771
GluI GCNGC 6 cut(s) 17, 80, 246, 575, 682, 1004
HaeIII GGCC 3 cut(s) 122, 375, 541
HapII CCGG 4 cut(s) 83, 106, 317, 436
HhaI GCGC 1 cut(s) 772
Hin1I GRCGYC 1 cut(s) 1056
Hin1II CATG 4 cut(s) 44, 604, 734, 1115
Hin6I GCGC 1 cut(s) 770
HinP1I GCGC 1 cut(s) 770
HincII GTYRAC 1 cut(s) 310
HindII GTYRAC 1 cut(s) 310
HinfI GANTC 6 cut(s) 35, 102, 143, 497, 1108, 1205
HpaII CCGG 4 cut(s) 83, 106, 317, 436
HphI GGTGA 3 cut(s) 155, 925, 1152
Hpy166II GTNNAC 2 cut(s) 310, 874
Hpy188I TCNGA 7 cut(s) 34, 101, 142, 727, 810, 867, 1077
Hpy188III TCNNGA 4 cut(s) 73, 785, 983, 1105
Hpy8I GTNNAC 2 cut(s) 310, 874
HpyAV CCTTC 3 cut(s) 218, 578, 913
HpyCH4III ACNGT 4 cut(s) 11, 863, 871, 1202
HpyCH4IV ACGT 1 cut(s) 1056
HpyCH4V TGCA 9 cut(s) 296, 369, 423, 516, 574, 617, 703, 794, 1003
HpyF10VI GCNNNNNNNGC 1 cut(s) 727
HpySE526I ACGT 1 cut(s) 1056
Hsp92I GRCGYC 1 cut(s) 1056
Hsp92II CATG 4 cut(s) 44, 604, 734, 1115
HspAI GCGC 1 cut(s) 770
KroI GCCGGC 1 cut(s) 82
KroNI GCCGGC 1 cut(s) 84
Kzo9I GATC 4 cut(s) 66, 135, 432, 1167
LmnI GCTCC 4 cut(s) 210, 695, 727, 848
Lsp1109I GCAGC 6 cut(s) 28, 66, 257, 586, 668, 1015
LweI GCATC 1 cut(s) 724
MaeI CTAG 3 cut(s) 264, 333, 426
MaeII ACGT 1 cut(s) 1056
MaeIII GTNAC 1 cut(s) 557
MalI GATC 4 cut(s) 68, 137, 434, 1169
MboI GATC 4 cut(s) 66, 135, 432, 1167
MboII GAAGA 5 cut(s) 290, 536, 1090, 1093, 1200
MflI RGATCY 1 cut(s) 66
MhlI GDGCHC 2 cut(s) 700, 1180
MluCI AATT 5 cut(s) 779, 811, 826, 843, 960
MlyI GAGTC 2 cut(s) 1102, 1214
MmeI TCCRAC 2 cut(s) 279, 705
MroNI GCCGGC 1 cut(s) 82
MroXI GAANNNNTTC 3 cut(s) 353, 830, 1100
MseI TTAA 1 cut(s) 710
MslI CAYNNNNRTG 1 cut(s) 428
MspA1I CMGCKG 1 cut(s) 721
MspI CCGG 4 cut(s) 83, 106, 317, 436
MspR9I CCNGG 4 cut(s) 124, 377, 549, 677
Mva1269I GAATGC 1 cut(s) 55
MvaI CCWGG 4 cut(s) 124, 377, 549, 677
MwoI GCNNNNNNNGC 1 cut(s) 727
NaeI GCCGGC 1 cut(s) 84
NdeII GATC 4 cut(s) 66, 135, 432, 1167
NgoMIV GCCGGC 1 cut(s) 82
NlaIII CATG 4 cut(s) 44, 604, 734, 1115
NlaIV GGNNCC 4 cut(s) 364, 416, 641, 1177
NmuCI GTSAC 1 cut(s) 557
NspV TTCGAA 2 cut(s) 347, 746
OliI CACNNNNGTG 1 cut(s) 428
PceI AGGCCT 2 cut(s) 122, 541
PcsI WCGNNNNNNNCGW 1 cut(s) 30
PctI GAATGC 1 cut(s) 55
PdiI GCCGGC 1 cut(s) 84
PdmI GAANNNNTTC 3 cut(s) 353, 830, 1100
PfeI GAWTC 4 cut(s) 35, 102, 143, 497
PflMI CCANNNNNTGG 1 cut(s) 123
PfoI TCCNGGA 1 cut(s) 547
PkrI GCNGC 6 cut(s) 18, 81, 247, 576, 683, 1005
PleI GAGTC 2 cut(s) 1102, 1213
PpsI GAGTC 2 cut(s) 1102, 1213
PpuMI RGGWCCY 1 cut(s) 639
Psp124BI GAGCTC 1 cut(s) 700
Psp5II RGGWCCY 1 cut(s) 639
Psp6I CCWGG 4 cut(s) 122, 375, 547, 675
PspGI CCWGG 4 cut(s) 122, 375, 547, 675
PspN4I GGNNCC 4 cut(s) 364, 416, 641, 1177
PspPI GGNCC 1 cut(s) 639
PspPPI RGGWCCY 1 cut(s) 639
PsuI RGATCY 1 cut(s) 66
PvuII CAGCTG 1 cut(s) 721
RseI CAYNNNNRTG 1 cut(s) 428
SacI GAGCTC 1 cut(s) 700
SaqAI TTAA 1 cut(s) 710
SatI GCNGC 6 cut(s) 17, 80, 246, 575, 682, 1004
Sau3AI GATC 4 cut(s) 66, 135, 432, 1167
Sau96I GGNCC 1 cut(s) 639
SchI GAGTC 2 cut(s) 1102, 1214
ScrFI CCNGG 4 cut(s) 124, 377, 549, 677
SduI GDGCHC 2 cut(s) 700, 1180
SfaNI GCATC 1 cut(s) 724
SfuI TTCGAA 2 cut(s) 347, 746
SinI GGWCC 1 cut(s) 639
SmiMI CAYNNNNRTG 1 cut(s) 428
SmlI CTYRAG 3 cut(s) 73, 644, 981
SmoI CTYRAG 3 cut(s) 73, 644, 981
Sse9I AATT 5 cut(s) 779, 811, 826, 843, 960
SseBI AGGCCT 2 cut(s) 122, 541
SsiI CCGC 3 cut(s) 5, 127, 501
SspMI CTAG 3 cut(s) 264, 333, 426
SstI GAGCTC 1 cut(s) 700
StuI AGGCCT 2 cut(s) 122, 541
StyD4I CCNGG 4 cut(s) 122, 375, 547, 675
StyI CCWWGG 2 cut(s) 117, 332
TaaI ACNGT 4 cut(s) 11, 863, 871, 1202
TaiI ACGT 1 cut(s) 1059
TaqI TCGA 5 cut(s) 177, 200, 347, 746, 897
TasI AATT 5 cut(s) 779, 811, 826, 843, 960
TfiI GAWTC 4 cut(s) 35, 102, 143, 497
Tru1I TTAA 1 cut(s) 710
Tru9I TTAA 1 cut(s) 710
TscAI CASTG 2 cut(s) 624, 1205
TseFI GTSAC 1 cut(s) 557
TseI GCWGC 6 cut(s) 16, 79, 245, 574, 681, 1003
Tsp45I GTSAC 1 cut(s) 557
TspDTI ATGAA 5 cut(s) 142, 932, 1003, 1044, 1055
TspRI CASTG 2 cut(s) 624, 1205
Van91I CCANNNNNTGG 1 cut(s) 123
VpaK11BI GGWCC 1 cut(s) 639
XapI RAATTY 2 cut(s) 779, 960
XmaJI CCTAGG 1 cut(s) 332
XmiI GTMKAC 1 cut(s) 873
XmnI GAANNNNTTC 3 cut(s) 353, 830, 1100
XspI CTAG 3 cut(s) 264, 333, 426
ZraI GACGTC 1 cut(s) 1057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.