Rh2CG004200

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000113
Physical Location & Seq
Forward (+)
396749 .. 398212
1464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG004200.1

Sequence Viewer

Length: 1326 bp
ATGCGGGGCTCTCCCCCTGCCAACATCCCAAACTCACAGATCGCAATGAAAATGGAAACAAGCAGCAGCAGCAGCAGCTCATTTCCCATTACTAGCAAAGATCTTCCTTGCGAGATCATAGAGGGAATTCTGCTGCAGCTGCCGGTCAAGTCGCTGCTCCGTTTCAAATGCGTGAGCAAATCATGGCTTAATCTCATCTCCGACCACAAATTCATCAAGTCACACCTTCACCACTCCACCAAACAACACCCTCACCACGATAATAATGATGGTGATCGAATATCAAACACACATCTCATGCTCTCCTCAACAACCCTCATTCACTCGCTCCATCTACAACTACCAAATGCTCGTACCAAACAAGAAGCAGAAGCCCCAGCTGCTGCTGCTCCAACTGATGCAGATGATGCAGTAGTACTCGAATCCATGGTGGAGTACCCGGTGGCATCGACGGTGAGGCGGCCAGCTGTCAAAGACATCAAGATCGTCGGTTCCTGCAACGGCTTGCTATGCTTGGTGCTCGACTTCCAACACATGATCATATACAACCCCTCCACCAGGCACGTTCAAGAAGTACCCAACCCAGAGGAAACTGTCATCGGTAGAGATTACTTTTACGGTTTCGGTTACGATTCTCGCAATGAGGACTGTAAAATAGTGAGGGCCACTTCTTCGAGTAGGGATGGCAATTTCGTCACCCAACTTGACATCTTTACTTTGAAGACCAACTCTTGGCGGACAAAAACCAAAACCCTCCCCTTTTATTTCATGTCCAGCGTGGTGGGTACCCTTCTAAATGGGGCTCTCCACTGGGCAGTCCGTCGAGGAATCAACATCAGTCCTTCTGACGGCGATGACCATGACCCGAGGCTTTTCGGCATTGTCACCTTTGATCTGATAGAGGAGACTTACAAAGAAATACCCCTGCCGTGTGACGGTGATAAGCATTTCTCTTTCTATGGGTTGGGGGTTTTAGGAGGGTGTCTGAGTATGCTCCACAGCCCCCACGGGTCTGATTATCAAGTGTGGCTTATGAAGGAATATGGAGTCAAGGCTTCTTGGAGCGTTTTCACAACCATCCCACAAAAGATGGAGGATACTAAGGAGTACATGGGATTGATGTCGCTTTTGTGCGTTTTGAAGAATGGCGAAATTCTAATGATGTTGCACAACCACAAAAAGGTTGTGATATACAATCCCGGACAGAGGAAATTTCGTACCATATTCAATTGGGAAATAGGCTCTTCCCAAGTGGCCTTATACATCGAGACTCTAGTTTCCCCAAAAATATATGCACCATCCTCATCACCATGCATCTCTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

441

Amino Acids

49.43

Weight (kDa)

7.3

Isoelectric Point (pI)

51.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 34 - 72 1.9e-08 F-box domain
F-box-like PF12937 34 - 70 9.9e-06 F-box-like
FBA_1 PF07734 157 - 426 6.5e-28 F-box associated beta propeller domain
FBA_3 PF08268 159 - 409 1.8e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 785
AccB1I GGYRCC 1 cut(s) 785
AccB7I CCANNNNNTGG 1 cut(s) 732
AciI CCGC 3 cut(s) 4, 460, 736
AcoI YGGCCR 1 cut(s) 461
AcsI RAATTY 4 cut(s) 126, 209, 1152, 1211
AfaI GTAC 7 cut(s) 355, 417, 437, 576, 787, 1109, 1219
AfiI CCNNNNNNNGG 6 cut(s) 558, 732, 848, 935, 1180, 1206
AgsI TTSAA 5 cut(s) 166, 569, 721, 1141, 1228
AjnI CCWGG 1 cut(s) 557
AluBI AGCT 4 cut(s) 78, 139, 380, 467
AluI AGCT 4 cut(s) 78, 139, 380, 467
Alw21I GWGCWC 1 cut(s) 522
Alw26I GTCTC 2 cut(s) 899, 1262
AlwNI CAGNNNCTG 1 cut(s) 383
Ama87I CYCGRG 1 cut(s) 865
AoxI GGCC 3 cut(s) 461, 663, 1254
ApoI RAATTY 4 cut(s) 126, 209, 1152, 1211
Asp718I GGTACC 1 cut(s) 785
AspS9I GGNCC 1 cut(s) 663
AsuC2I CCSGG 2 cut(s) 440, 1200
AsuHPI GGTGA 8 cut(s) 221, 245, 284, 466, 688, 877, 950, 1299
AvaI CYCGRG 1 cut(s) 865
BanI GGYRCC 1 cut(s) 785
BanII GRGCYC 2 cut(s) 11, 805
BbsI GAAGAC 1 cut(s) 728
Bbv12I GWGCWC 1 cut(s) 522
BccI CCATC 6 cut(s) 263, 339, 677, 1084, 1085, 1306
BceAI ACGGC 3 cut(s) 517, 865, 913
BciT130I CCWGG 1 cut(s) 559
BciVI GTATCC 1 cut(s) 1090
BclI TGATCA 1 cut(s) 537
BcnI CCSGG 2 cut(s) 440, 1200
BcoDI GTCTC 2 cut(s) 899, 1262
BfaI CTAG 3 cut(s) 93, 1274, 1320
BfmI CTRYAG 1 cut(s) 134
BfuI GTATCC 1 cut(s) 1090
BglII AGATCT 1 cut(s) 100
BmcAI AGTACT 1 cut(s) 417
Bme1390I CCNGG 3 cut(s) 440, 559, 1200
BmeT110I CYCGRG 1 cut(s) 865
BmgT120I GGNCC 1 cut(s) 663
BmiI GGNNCC 2 cut(s) 493, 787
BmrFI CCNGG 3 cut(s) 440, 559, 1200
BmrI ACTGGG 1 cut(s) 820
BmsI GCATC 3 cut(s) 388, 397, 455
BmuI ACTGGG 1 cut(s) 820
BpiI GAAGAC 1 cut(s) 728
BpuMI CCSGG 2 cut(s) 440, 1200
BsaBI GATNNNNATC 1 cut(s) 273
BsaJI CCNNGG 3 cut(s) 426, 866, 1006
BsaXI ACNNNNNCTCC 2 cut(s) 536, 566
Bsc4I CCNNNNNNNGG 6 cut(s) 558, 732, 848, 935, 1180, 1206
Bse118I RCCGGY 1 cut(s) 142
Bse1I ACTGG 1 cut(s) 815
Bse3DI GCAATG 2 cut(s) 51, 646
Bse8I GATNNNNATC 1 cut(s) 273
BseBI CCWGG 1 cut(s) 559
BseDI CCNNGG 3 cut(s) 426, 866, 1006
BseGI GGATG 4 cut(s) 24, 688, 1077, 1298
BseJI GATNNNNATC 1 cut(s) 273
BseLI CCNNNNNNNGG 6 cut(s) 558, 732, 848, 935, 1180, 1206
BseMI GCAATG 2 cut(s) 51, 646
BseMII CTCAG 1 cut(s) 977
BseNI ACTGG 1 cut(s) 815
BseRI GAGGAG 2 cut(s) 295, 917
BseYI CCCAGC 1 cut(s) 376
BshFI GGCC 3 cut(s) 463, 665, 1256
BshNI GGYRCC 1 cut(s) 785
BsiHKAI GWGCWC 1 cut(s) 522
BsiHKCI CYCGRG 1 cut(s) 865
BsiSI CCGG 3 cut(s) 143, 440, 1200
BslI CCNNNNNNNGG 6 cut(s) 558, 732, 848, 935, 1180, 1206
BsmAI GTCTC 2 cut(s) 899, 1262
BsnI GGCC 3 cut(s) 463, 665, 1256
BsoBI CYCGRG 1 cut(s) 865
Bsp1286I GDGCHC 3 cut(s) 11, 522, 805
Bsp143I GATC 7 cut(s) 39, 100, 114, 274, 483, 537, 892
Bsp19I CCATGG 1 cut(s) 426
BspACI CCGC 3 cut(s) 4, 460, 736
BspANI GGCC 3 cut(s) 463, 665, 1256
BspCNI CTCAG 1 cut(s) 978
BspLI GGNNCC 2 cut(s) 493, 787
BspMAI CTGCAG 1 cut(s) 138
BspQI GCTCTTC 1 cut(s) 1249
BspT107I GGYRCC 1 cut(s) 785
BsrDI GCAATG 2 cut(s) 51, 646
BsrFI RCCGGY 1 cut(s) 142
BsrI ACTGG 1 cut(s) 815
BssAI RCCGGY 1 cut(s) 142
BssECI CCNNGG 3 cut(s) 426, 866, 1006
BssMI GATC 7 cut(s) 39, 100, 114, 274, 483, 537, 892
BssT1I CCWWGG 1 cut(s) 426
Bst2UI CCWGG 1 cut(s) 559
Bst4CI ACNGT 5 cut(s) 454, 595, 620, 650, 938
Bst6I CTCTTC 1 cut(s) 1249
BstAPI GCANNNNNTGC 1 cut(s) 407
BstC8I GCNNGC 2 cut(s) 465, 506
BstDEI CTNAG 2 cut(s) 986, 1101
BstDSI CCRYGG 2 cut(s) 426, 1006
BstENI CCTNNNNNAGG 1 cut(s) 556
BstF5I GGATG 4 cut(s) 24, 688, 1077, 1298
BstKTI GATC 7 cut(s) 42, 103, 117, 277, 486, 540, 895
BstMAI GTCTC 2 cut(s) 899, 1262
BstMBI GATC 7 cut(s) 39, 100, 114, 274, 483, 537, 892
BstMWI GCNNNNNNNGC 8 cut(s) 69, 72, 75, 139, 380, 386, 407, 510
BstNI CCWGG 1 cut(s) 559
BstSCI CCNGG 3 cut(s) 438, 557, 1198
BstSFI CTRYAG 1 cut(s) 134
BstV2I GAAGAC 1 cut(s) 728
BstX2I RGATCY 1 cut(s) 100
BstXI CCANNNNNNTGG 1 cut(s) 781
BstYI RGATCY 1 cut(s) 100
BsuI GTATCC 1 cut(s) 1090
BsuRI GGCC 3 cut(s) 463, 665, 1256
BtgI CCRYGG 2 cut(s) 426, 1006
BtgZI GCGATG 1 cut(s) 867
BtsCI GGATG 4 cut(s) 24, 688, 1077, 1298
BtsIMutI CAGTG 1 cut(s) 808
Cac8I GCNNGC 2 cut(s) 465, 506
CaiI CAGNNNCTG 1 cut(s) 383
Cfr10I RCCGGY 1 cut(s) 142
Cfr13I GGNCC 1 cut(s) 663
Csp6I GTAC 7 cut(s) 354, 416, 436, 575, 786, 1108, 1218
CviAII CATG 8 cut(s) 183, 298, 427, 535, 769, 860, 1111, 1311
CviQI GTAC 7 cut(s) 354, 416, 436, 575, 786, 1108, 1218
DdeI CTNAG 2 cut(s) 986, 1101
DpnI GATC 7 cut(s) 41, 102, 116, 276, 485, 539, 894
DpnII GATC 7 cut(s) 39, 100, 114, 274, 483, 537, 892
EaeI YGGCCR 1 cut(s) 461
Eam1104I CTCTTC 1 cut(s) 1249
EarI CTCTTC 1 cut(s) 1249
EciI GGCGGA 1 cut(s) 751
Eco130I CCWWGG 1 cut(s) 426
Eco24I GRGCYC 2 cut(s) 11, 805
Eco88I CYCGRG 1 cut(s) 865
EcoNI CCTNNNNNAGG 1 cut(s) 556
EcoRI GAATTC 1 cut(s) 126
EcoRII CCWGG 1 cut(s) 557
EcoT14I CCWWGG 1 cut(s) 426
EcoT22I ATGCAT 1 cut(s) 1316
EcoT38I GRGCYC 2 cut(s) 11, 805
ErhI CCWWGG 1 cut(s) 426
FaeI CATG 8 cut(s) 186, 301, 430, 538, 772, 863, 1114, 1314
FalI AAGNNNNNCTT 2 cut(s) 1014, 1046
FatI CATG 8 cut(s) 182, 297, 426, 534, 768, 859, 1110, 1310
FbaI TGATCA 1 cut(s) 537
FokI GGATG 4 cut(s) 11, 695, 1064, 1285
FriOI GRGCYC 2 cut(s) 11, 805
FspBI CTAG 3 cut(s) 93, 1274, 1320
GsaI CCCAGC 1 cut(s) 380
HaeIII GGCC 3 cut(s) 463, 665, 1256
HapII CCGG 3 cut(s) 143, 440, 1200
Hin1II CATG 8 cut(s) 186, 301, 430, 538, 772, 863, 1114, 1314
HinfI GANTC 5 cut(s) 422, 632, 828, 1047, 1270
HpaII CCGG 3 cut(s) 143, 440, 1200
HphI GGTGA 8 cut(s) 221, 245, 284, 466, 688, 877, 950, 1299
Hpy188I TCNGA 5 cut(s) 202, 847, 897, 987, 1015
Hpy188III TCNNGA 3 cut(s) 481, 569, 1267
Hpy99I CGWCG 3 cut(s) 454, 491, 825
HpyAV CCTTC 4 cut(s) 236, 800, 852, 1030
HpyCH4III ACNGT 5 cut(s) 454, 595, 620, 650, 938
HpyCH4IV ACGT 1 cut(s) 564
HpyCH4V TGCA 7 cut(s) 136, 401, 410, 498, 1168, 1295, 1314
HpyF10VI GCNNNNNNNGC 8 cut(s) 69, 72, 75, 139, 380, 386, 407, 510
HpyF3I CTNAG 2 cut(s) 986, 1101
HpySE526I ACGT 1 cut(s) 564
Hsp92II CATG 8 cut(s) 186, 301, 430, 538, 772, 863, 1114, 1314
KpnI GGTACC 1 cut(s) 789
Ksp22I TGATCA 1 cut(s) 537
Kzo9I GATC 7 cut(s) 39, 100, 114, 274, 483, 537, 892
LguI GCTCTTC 1 cut(s) 1249
LmnI GCTCC 5 cut(s) 162, 333, 394, 999, 1062
LweI GCATC 3 cut(s) 388, 397, 455
MaeI CTAG 3 cut(s) 93, 1274, 1320
MaeII ACGT 1 cut(s) 564
MaeIII GTNAC 5 cut(s) 219, 626, 694, 883, 932
MalI GATC 7 cut(s) 41, 102, 116, 276, 485, 539, 894
MboI GATC 7 cut(s) 39, 100, 114, 274, 483, 537, 892
MboII GAAGA 5 cut(s) 95, 663, 733, 1153, 1236
MfeI CAATTG 1 cut(s) 1228
MflI RGATCY 1 cut(s) 100
MhlI GDGCHC 3 cut(s) 11, 522, 805
MluCI AATT 6 cut(s) 126, 209, 688, 1152, 1211, 1228
MlyI GAGTC 2 cut(s) 1056, 1264
MmeI TCCRAC 3 cut(s) 225, 416, 553
Mph1103I ATGCAT 1 cut(s) 1316
MseI TTAA 1 cut(s) 189
MslI CAYNNNNRTG 1 cut(s) 1309
MspA1I CMGCKG 3 cut(s) 139, 380, 467
MspI CCGG 3 cut(s) 143, 440, 1200
MspR9I CCNGG 3 cut(s) 440, 559, 1200
MunI CAATTG 1 cut(s) 1228
MvaI CCWGG 1 cut(s) 559
MwoI GCNNNNNNNGC 8 cut(s) 69, 72, 75, 139, 380, 386, 407, 510
NciI CCSGG 2 cut(s) 440, 1200
NcoI CCATGG 1 cut(s) 426
NdeII GATC 7 cut(s) 39, 100, 114, 274, 483, 537, 892
NlaIII CATG 8 cut(s) 186, 301, 430, 538, 772, 863, 1114, 1314
NlaIV GGNNCC 2 cut(s) 493, 787
NmuCI GTSAC 4 cut(s) 219, 694, 883, 932
NsiI ATGCAT 1 cut(s) 1316
PciSI GCTCTTC 1 cut(s) 1249
PfeI GAWTC 3 cut(s) 422, 632, 828
PflMI CCANNNNNTGG 1 cut(s) 732
PfoI TCCNGGA 1 cut(s) 1198
PleI GAGTC 2 cut(s) 1055, 1264
PpsI GAGTC 2 cut(s) 1055, 1264
Psp6I CCWGG 1 cut(s) 557
PspFI CCCAGC 1 cut(s) 376
PspGI CCWGG 1 cut(s) 557
PspN4I GGNNCC 2 cut(s) 493, 787
PspPI GGNCC 1 cut(s) 663
PstI CTGCAG 1 cut(s) 138
PstNI CAGNNNCTG 1 cut(s) 383
PsuI RGATCY 1 cut(s) 100
PvuII CAGCTG 3 cut(s) 139, 380, 467
RsaI GTAC 7 cut(s) 355, 417, 437, 576, 787, 1109, 1219
RsaNI GTAC 7 cut(s) 354, 416, 436, 575, 786, 1108, 1218
RseI CAYNNNNRTG 1 cut(s) 1309
SapI GCTCTTC 1 cut(s) 1249
SaqAI TTAA 1 cut(s) 189
Sau3AI GATC 7 cut(s) 39, 100, 114, 274, 483, 537, 892
Sau96I GGNCC 1 cut(s) 663
ScaI AGTACT 1 cut(s) 417
SchI GAGTC 2 cut(s) 1056, 1264
ScrFI CCNGG 3 cut(s) 440, 559, 1200
SduI GDGCHC 3 cut(s) 11, 522, 805
SetI ASST 9 cut(s) 80, 141, 228, 382, 469, 567, 890, 1185, 1325
SfaNI GCATC 3 cut(s) 388, 397, 455
SfcI CTRYAG 1 cut(s) 134
SmiMI CAYNNNNRTG 1 cut(s) 1309
Sse9I AATT 6 cut(s) 126, 209, 688, 1152, 1211, 1228
SsiI CCGC 3 cut(s) 4, 460, 736
SspMI CTAG 3 cut(s) 93, 1274, 1320
StyD4I CCNGG 3 cut(s) 438, 557, 1198
StyI CCWWGG 1 cut(s) 426
TaaI ACNGT 5 cut(s) 454, 595, 620, 650, 938
TaiI ACGT 1 cut(s) 567
TaqI TCGA 7 cut(s) 277, 420, 449, 522, 674, 823, 1266
TasI AATT 6 cut(s) 126, 209, 688, 1152, 1211, 1228
TatI WGTACW 2 cut(s) 415, 1107
TauI GCSGC 1 cut(s) 463
TfiI GAWTC 3 cut(s) 422, 632, 828
Tru1I TTAA 1 cut(s) 189
Tru9I TTAA 1 cut(s) 189
TscAI CASTG 1 cut(s) 815
TseFI GTSAC 4 cut(s) 219, 694, 883, 932
Tsp45I GTSAC 4 cut(s) 219, 694, 883, 932
TspDTI ATGAA 4 cut(s) 62, 202, 757, 1049
TspGWI ACGGA 2 cut(s) 149, 809
TspRI CASTG 1 cut(s) 815
Van91I CCANNNNNTGG 1 cut(s) 732
XagI CCTNNNNNAGG 1 cut(s) 556
XapI RAATTY 4 cut(s) 126, 209, 1152, 1211
XspI CTAG 3 cut(s) 93, 1274, 1320
ZrmI AGTACT 1 cut(s) 417
Zsp2I ATGCAT 1 cut(s) 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.