Rroxscaffold_2G00094330

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000113
Physical Location & Seq
Forward (+)
15625947 .. 15629179
3233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094330.1

Sequence Viewer

Length: 1266 bp
ATGAGGAAGAGAACCAATCTCAGACCCCAATTGAAACCAATTTCGAAGCCAGCGCTCAAATTCCTATGGATGATCAGAAAAAAGAGACACCTCTCACTCTCTGCCCGGCGTTCTTCAACCGCCACCGACATGCCGGACGGCTGTGCCGCGGTTCTCACCGACCACGAAGACGTCCTCGTCGAAATACTCGCAAGACTCCCCGTCAAAACCCTAATCCGATTCCGGTGCGTCTGCACGGCGTGGCGTTCCCTAATCGCCGACCCTCATTTCCTCAAGAAGCAGAGGAAATACGACGCCGAAAGAGGCCTCAACGACAGCGATCTCCGGCTACTGTTCTCCATGAAGCCTCCCAGCTCCATGGGCTTGGTGGATTTGAAGGGTTTGAAGGATGCTGAGCTGGCCAAAAGATTCAGAGAGGACCGTGTTGCAACCAGAGAGCTTGGTTTTCCGGTGAGTCTTGATCATGGTTATGATATAGTGAATGTGGGTACTTGCAATGGGATTATATGCATTCAATTTCATCGCGGCGAGTATGCTTTGTGGAACCCTTGTACCGGAGACTACAATGTGTTGCCGAAACCTAGTGTTTTTTGCTATCCAAGGTATTATGGATTTGGTTATGATGAAATCAATGATGATTACAAGGTAGTGAAGGGGTCACATTGTGAAACTGATGGGACTGGTTGGGTGAAACCAATGATTCAGGTGTTTTCGCTGAGAAAAGGAACATGGAAGACCTATCCCGGCCCGAAGAATGTTTGCATGAGAGGGCAGGGGGGCTTTGTAAATGGAATGCTGCATTGGCTGTGGTTTGAGGAGTGGTGGAAGACAGAAAGCAAGGAAATTAGGCCTTTTAGTTTAGCTGAGGAGAAATTTCAGGAGGCGATGCCGATTCCCTGGAATGGCATTGCTGGAATTTTGATTTCCGGGAATCGTCTCTGTGTACATAGTGAAACAGGGGCTGTGAGGATAATGATGATGAAGGAATACGGGGTCAAGGAATCTTGGACTGAAGTGCTGTATCTGACTTTTTTTACCGTACCTCAGATATATGATGAAATATGCAACGTGAAGCCTCTGTGGATTCTAGAGAATGGTGATGTTTTGGCGTACACAGTACAACAAGGAGGCTACTTGTCATTATATAAACCAAAGGATAAGGCATTTAGGAATGTTATTAAGCCTGAAGGAAGTTACAGGTTTGAATCCATCATTTACAGAGAAACTTTCGTTTCACCGGTAACTGGCAGTCTTGGAGAAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

421

Amino Acids

48.39

Weight (kDa)

9.06

Isoelectric Point (pI)

34.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 56 - 92 3.9e-10 F-box domain
F-box-like PF12937 57 - 90 3.4e-07 F-box-like
FBA_1 PF07734 156 - 343 8.6e-18 F-box associated beta propeller domain
FBA_3 PF08268 160 - 392 1.6e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 176
AatII GACGTC 1 cut(s) 174
AccII CGCG 2 cut(s) 149, 525
AciI CCGC 4 cut(s) 120, 147, 149, 525
AcoI YGGCCR 1 cut(s) 399
AcsI RAATTY 3 cut(s) 59, 872, 915
AcuI CTGAAG 2 cut(s) 1032, 1206
AcyI GRCGYC 2 cut(s) 171, 294
AdeI CACNNNGTG 2 cut(s) 240, 665
AfaI GTAC 6 cut(s) 490, 553, 945, 1041, 1112, 1119
AfeI AGCGCT 1 cut(s) 54
AfiI CCNNNNNNNGG 3 cut(s) 554, 902, 1244
AgeI ACCGGT 1 cut(s) 1237
AgsI TTSAA 6 cut(s) 34, 117, 376, 385, 515, 1205
AhdI GACNNNNNGTC 1 cut(s) 200
AjnI CCWGG 1 cut(s) 896
AjuI GAANNNNNNNTTGG 2 cut(s) 784, 816
AluBI AGCT 4 cut(s) 354, 397, 439, 863
AluI AGCT 4 cut(s) 354, 397, 439, 863
Alw26I GTCTC 3 cut(s) 79, 552, 941
AlwNI CAGNNNCTG 1 cut(s) 962
Aor51HI AGCGCT 1 cut(s) 54
AoxI GGCC 4 cut(s) 304, 399, 745, 848
ApeKI GCWGC 1 cut(s) 796
ApoI RAATTY 3 cut(s) 59, 872, 915
AsiGI ACCGGT 1 cut(s) 1237
AspLEI GCGC 1 cut(s) 55
AspS9I GGNCC 2 cut(s) 418, 746
AsuC2I CCSGG 3 cut(s) 106, 744, 928
AsuHPI GGTGA 5 cut(s) 148, 463, 700, 1109, 1227
AsuII TTCGAA 1 cut(s) 44
AvaII GGWCC 1 cut(s) 418
BaeI ACNNNNGTAYC 2 cut(s) 535, 568
BalI TGGCCA 1 cut(s) 401
BbsI GAAGAC 3 cut(s) 174, 740, 833
BbvCI CCTCAGC 1 cut(s) 864
BbvI GCAGC 1 cut(s) 783
BccI CCATC 2 cut(s) 668, 1217
BceAI ACGGC 2 cut(s) 154, 252
BcgI CGANNNNNNTGC 2 cut(s) 207, 241
BciT130I CCWGG 1 cut(s) 898
BclI TGATCA 2 cut(s) 72, 460
BcnI CCSGG 3 cut(s) 106, 744, 928
BcoDI GTCTC 3 cut(s) 79, 552, 941
BfaI CTAG 2 cut(s) 582, 1088
BfoI RGCGCY 1 cut(s) 56
BisI GCNGC 3 cut(s) 147, 526, 797
BlpI GCTNAGC 1 cut(s) 393
BlsI GCNGC 3 cut(s) 148, 527, 798
Bme1390I CCNGG 4 cut(s) 106, 744, 898, 928
Bme18I GGWCC 1 cut(s) 418
BmeRI GACNNNNNGTC 1 cut(s) 200
BmgT120I GGNCC 2 cut(s) 418, 746
BmiI GGNNCC 1 cut(s) 545
BmrFI CCNGG 4 cut(s) 106, 744, 898, 928
BmsI GCATC 2 cut(s) 379, 876
BpiI GAAGAC 3 cut(s) 174, 740, 833
Bpu10I CCTNAGC 1 cut(s) 864
Bpu1102I GCTNAGC 1 cut(s) 393
Bpu14I TTCGAA 1 cut(s) 44
BpuEI CTTGAG 1 cut(s) 257
BpuMI CCSGG 3 cut(s) 106, 744, 928
BsaHI GRCGYC 2 cut(s) 171, 294
BsaJI CCNNGG 4 cut(s) 147, 357, 599, 896
BsaWI WCCGGW 4 cut(s) 222, 448, 554, 1237
Bsc4I CCNNNNNNNGG 3 cut(s) 554, 902, 1244
Bse118I RCCGGY 1 cut(s) 1237
Bse1I ACTGG 2 cut(s) 685, 1249
Bse3DI GCAATG 2 cut(s) 502, 906
BseBI CCWGG 1 cut(s) 898
BseDI CCNNGG 4 cut(s) 147, 357, 599, 896
BseGI GGATG 2 cut(s) 75, 394
BseLI CCNNNNNNNGG 3 cut(s) 554, 902, 1244
BseMI GCAATG 2 cut(s) 502, 906
BseMII CTCAG 5 cut(s) 34, 384, 707, 855, 1058
BseNI ACTGG 2 cut(s) 685, 1249
BseRI GAGGAG 2 cut(s) 830, 881
BseXI GCAGC 1 cut(s) 783
BseYI CCCAGC 1 cut(s) 350
BsgI GTGCAG 1 cut(s) 217
Bsh1236I CGCG 2 cut(s) 149, 525
BshFI GGCC 4 cut(s) 306, 401, 747, 850
BshTI ACCGGT 1 cut(s) 1237
BsiSI CCGG 9 cut(s) 106, 134, 223, 325, 449, 555, 744, 927, 1238
BslFI GGGAC 1 cut(s) 691
BslI CCNNNNNNNGG 3 cut(s) 554, 902, 1244
BsmAI GTCTC 3 cut(s) 79, 552, 941
BsmBI CGTCTC 1 cut(s) 941
BsmFI GGGAC 1 cut(s) 691
BsmI GAATGC 2 cut(s) 510, 798
BsnI GGCC 4 cut(s) 306, 401, 747, 850
Bsp119I TTCGAA 1 cut(s) 44
Bsp1407I TGTACA 1 cut(s) 943
Bsp143I GATC 3 cut(s) 72, 319, 460
Bsp1720I GCTNAGC 1 cut(s) 393
Bsp19I CCATGG 1 cut(s) 357
BspACI CCGC 4 cut(s) 120, 147, 149, 525
BspANI GGCC 4 cut(s) 306, 401, 747, 850
BspCNI CTCAG 5 cut(s) 33, 385, 708, 856, 1057
BspFNI CGCG 2 cut(s) 149, 525
BspLI GGNNCC 1 cut(s) 545
BspT104I TTCGAA 1 cut(s) 44
BsrDI GCAATG 2 cut(s) 502, 906
BsrFI RCCGGY 1 cut(s) 1237
BsrGI TGTACA 1 cut(s) 943
BsrI ACTGG 2 cut(s) 685, 1249
BssAI RCCGGY 1 cut(s) 1237
BssECI CCNNGG 4 cut(s) 147, 357, 599, 896
BssMI GATC 3 cut(s) 72, 319, 460
BssNI GRCGYC 2 cut(s) 171, 294
BssT1I CCWWGG 2 cut(s) 357, 599
Bst2UI CCWGG 1 cut(s) 898
Bst4CI ACNGT 4 cut(s) 333, 422, 1039, 1117
Bst6I CTCTTC 1 cut(s) 2
BstACI GRCGYC 2 cut(s) 171, 294
BstAUI TGTACA 1 cut(s) 943
BstBI TTCGAA 1 cut(s) 44
BstC8I GCNNGC 2 cut(s) 51, 399
BstDEI CTNAG 5 cut(s) 20, 393, 716, 864, 1044
BstDSI CCRYGG 2 cut(s) 147, 357
BstF5I GGATG 2 cut(s) 75, 394
BstFNI CGCG 2 cut(s) 149, 525
BstH2I RGCGCY 1 cut(s) 56
BstHHI GCGC 1 cut(s) 55
BstKTI GATC 3 cut(s) 75, 322, 463
BstMAI GTCTC 3 cut(s) 79, 552, 941
BstMBI GATC 3 cut(s) 72, 319, 460
BstMWI GCNNNNNNNGC 3 cut(s) 360, 398, 802
BstNI CCWGG 1 cut(s) 898
BstNSI RCATGY 1 cut(s) 133
BstSCI CCNGG 4 cut(s) 104, 742, 896, 926
BstUI CGCG 2 cut(s) 149, 525
BstV1I GCAGC 1 cut(s) 783
BstV2I GAAGAC 3 cut(s) 174, 740, 833
BstXI CCANNNNNNTGG 2 cut(s) 358, 364
BsuRI GGCC 4 cut(s) 306, 401, 747, 850
BtgI CCRYGG 2 cut(s) 147, 357
BtgZI GCGATG 2 cut(s) 506, 899
BtsCI GGATG 2 cut(s) 75, 394
Cac8I GCNNGC 2 cut(s) 51, 399
CaiI CAGNNNCTG 1 cut(s) 962
CfoI GCGC 1 cut(s) 55
Cfr10I RCCGGY 1 cut(s) 1237
Cfr13I GGNCC 2 cut(s) 418, 746
Cfr42I CCGCGG 1 cut(s) 150
CseI GACGC 2 cut(s) 217, 302
Csp6I GTAC 6 cut(s) 489, 552, 944, 1040, 1111, 1118
CspAI ACCGGT 1 cut(s) 1237
CviAII CATG 6 cut(s) 130, 340, 358, 464, 729, 763
CviQI GTAC 6 cut(s) 489, 552, 944, 1040, 1111, 1118
DdeI CTNAG 5 cut(s) 20, 393, 716, 864, 1044
DpnI GATC 3 cut(s) 74, 321, 462
DpnII GATC 3 cut(s) 72, 319, 460
DraIII CACNNNGTG 2 cut(s) 240, 665
DrdI GACNNNNNNGTC 1 cut(s) 176
DriI GACNNNNNGTC 1 cut(s) 200
DseDI GACNNNNNNGTC 1 cut(s) 176
EaeI YGGCCR 1 cut(s) 399
Eam1104I CTCTTC 1 cut(s) 2
Eam1105I GACNNNNNGTC 1 cut(s) 200
EarI CTCTTC 1 cut(s) 2
Eco130I CCWWGG 2 cut(s) 357, 599
Eco147I AGGCCT 2 cut(s) 306, 850
Eco47I GGWCC 1 cut(s) 418
Eco47III AGCGCT 1 cut(s) 54
Eco57I CTGAAG 2 cut(s) 1032, 1206
EcoRII CCWGG 1 cut(s) 896
EcoT14I CCWWGG 2 cut(s) 357, 599
EcoT22I ATGCAT 1 cut(s) 512
ErhI CCWWGG 2 cut(s) 357, 599
Esp3I CGTCTC 1 cut(s) 941
FaeI CATG 6 cut(s) 133, 343, 361, 467, 732, 766
FaqI GGGAC 1 cut(s) 691
FatI CATG 6 cut(s) 129, 339, 357, 463, 728, 762
FbaI TGATCA 2 cut(s) 72, 460
Fnu4HI GCNGC 3 cut(s) 147, 526, 797
FokI GGATG 2 cut(s) 82, 401
Fsp4HI GCNGC 3 cut(s) 147, 526, 797
FspBI CTAG 2 cut(s) 582, 1088
GlaI GCGC 1 cut(s) 54
GluI GCNGC 3 cut(s) 147, 526, 797
GsaI CCCAGC 1 cut(s) 354
HaeII RGCGCY 1 cut(s) 56
HaeIII GGCC 4 cut(s) 306, 401, 747, 850
HapII CCGG 9 cut(s) 106, 134, 223, 325, 449, 555, 744, 927, 1238
HgaI GACGC 2 cut(s) 217, 302
HhaI GCGC 1 cut(s) 55
Hin1I GRCGYC 2 cut(s) 171, 294
Hin1II CATG 6 cut(s) 133, 343, 361, 467, 732, 766
Hin6I GCGC 1 cut(s) 53
HinP1I GCGC 1 cut(s) 53
HpaII CCGG 9 cut(s) 106, 134, 223, 325, 449, 555, 744, 927, 1238
HphI GGTGA 5 cut(s) 148, 463, 700, 1109, 1227
Hpy166II GTNNAC 2 cut(s) 944, 1113
Hpy188I TCNGA 7 cut(s) 23, 77, 218, 413, 1026, 1047, 1265
Hpy188III TCNNGA 4 cut(s) 274, 458, 878, 1088
Hpy8I GTNNAC 2 cut(s) 944, 1113
Hpy99I CGWCG 2 cut(s) 182, 296
HpyAV CCTTC 5 cut(s) 370, 379, 646, 976, 1181
HpyCH4III ACNGT 4 cut(s) 333, 422, 1039, 1117
HpyCH4IV ACGT 2 cut(s) 171, 1068
HpyCH4V TGCA 7 cut(s) 234, 428, 495, 510, 762, 799, 1065
HpyF10VI GCNNNNNNNGC 3 cut(s) 360, 398, 802
HpyF3I CTNAG 5 cut(s) 20, 393, 716, 864, 1044
HpySE526I ACGT 2 cut(s) 171, 1068
Hsp92I GRCGYC 2 cut(s) 171, 294
Hsp92II CATG 6 cut(s) 133, 343, 361, 467, 732, 766
HspAI GCGC 1 cut(s) 53
Ksp22I TGATCA 2 cut(s) 72, 460
KspI CCGCGG 1 cut(s) 150
Kzo9I GATC 3 cut(s) 72, 319, 460
LmnI GCTCC 1 cut(s) 359
Lsp1109I GCAGC 1 cut(s) 783
LweI GCATC 2 cut(s) 379, 876
MaeI CTAG 2 cut(s) 582, 1088
MaeII ACGT 2 cut(s) 171, 1068
MaeIII GTNAC 3 cut(s) 657, 1193, 1240
MalI GATC 3 cut(s) 74, 321, 462
MboI GATC 3 cut(s) 72, 319, 460
MboII GAAGA 6 cut(s) 19, 105, 179, 745, 763, 838
MfeI CAATTG 1 cut(s) 29
MlsI TGGCCA 1 cut(s) 401
MluCI AATT 7 cut(s) 29, 39, 59, 515, 843, 872, 915
MluNI TGGCCA 1 cut(s) 401
MlyI GAGTC 2 cut(s) 189, 463
Mox20I TGGCCA 1 cut(s) 401
Mph1103I ATGCAT 1 cut(s) 512
MscI TGGCCA 1 cut(s) 401
MseI TTAA 1 cut(s) 1179
MslI CAYNNNNRTG 2 cut(s) 128, 468
Msp20I TGGCCA 1 cut(s) 401
MspA1I CMGCKG 1 cut(s) 149
MspI CCGG 9 cut(s) 106, 134, 223, 325, 449, 555, 744, 927, 1238
MspR9I CCNGG 4 cut(s) 106, 744, 898, 928
MunI CAATTG 1 cut(s) 29
Mva1269I GAATGC 2 cut(s) 510, 798
MvaI CCWGG 1 cut(s) 898
MvnI CGCG 2 cut(s) 149, 525
MwoI GCNNNNNNNGC 3 cut(s) 360, 398, 802
NciI CCSGG 3 cut(s) 106, 744, 928
NcoI CCATGG 1 cut(s) 357
NdeII GATC 3 cut(s) 72, 319, 460
NlaIII CATG 6 cut(s) 133, 343, 361, 467, 732, 766
NlaIV GGNNCC 1 cut(s) 545
NmuCI GTSAC 1 cut(s) 657
NsiI ATGCAT 1 cut(s) 512
NspI RCATGY 1 cut(s) 133
NspV TTCGAA 1 cut(s) 44
PceI AGGCCT 2 cut(s) 306, 850
PcsI WCGNNNNNNNCGW 1 cut(s) 177
PctI GAATGC 2 cut(s) 510, 798
PfeI GAWTC 8 cut(s) 219, 408, 700, 892, 931, 1001, 1084, 1205
PfoI TCCNGGA 1 cut(s) 926
PinAI ACCGGT 1 cut(s) 1237
PkrI GCNGC 3 cut(s) 148, 527, 798
PleI GAGTC 2 cut(s) 189, 462
PpsI GAGTC 2 cut(s) 189, 462
Psp6I CCWGG 1 cut(s) 896
PspFI CCCAGC 1 cut(s) 350
PspGI CCWGG 1 cut(s) 896
PspN4I GGNNCC 1 cut(s) 545
PspPI GGNCC 2 cut(s) 418, 746
PstNI CAGNNNCTG 1 cut(s) 962
RsaI GTAC 6 cut(s) 490, 553, 945, 1041, 1112, 1119
RsaNI GTAC 6 cut(s) 489, 552, 944, 1040, 1111, 1118
RseI CAYNNNNRTG 2 cut(s) 128, 468
SacII CCGCGG 1 cut(s) 150
SaqAI TTAA 1 cut(s) 1179
SatI GCNGC 3 cut(s) 147, 526, 797
Sau3AI GATC 3 cut(s) 72, 319, 460
Sau96I GGNCC 2 cut(s) 418, 746
SchI GAGTC 2 cut(s) 189, 463
ScrFI CCNGG 4 cut(s) 106, 744, 898, 928
SfaNI GCATC 2 cut(s) 379, 876
Sfr303I CCGCGG 1 cut(s) 150
SfuI TTCGAA 1 cut(s) 44
SgrBI CCGCGG 1 cut(s) 150
SinI GGWCC 1 cut(s) 418
SmiMI CAYNNNNRTG 2 cut(s) 128, 468
SmlI CTYRAG 1 cut(s) 272
SmoI CTYRAG 1 cut(s) 272
Sse9I AATT 7 cut(s) 29, 39, 59, 515, 843, 872, 915
SseBI AGGCCT 2 cut(s) 306, 850
SsiI CCGC 4 cut(s) 120, 147, 149, 525
SspMI CTAG 2 cut(s) 582, 1088
StuI AGGCCT 2 cut(s) 306, 850
StyD4I CCNGG 4 cut(s) 104, 742, 896, 926
StyI CCWWGG 2 cut(s) 357, 599
TaaI ACNGT 4 cut(s) 333, 422, 1039, 1117
TaiI ACGT 2 cut(s) 174, 1071
TaqI TCGA 2 cut(s) 44, 180
TasI AATT 7 cut(s) 29, 39, 59, 515, 843, 872, 915
TatI WGTACW 2 cut(s) 943, 1117
TauI GCSGC 2 cut(s) 149, 528
TfiI GAWTC 8 cut(s) 219, 408, 700, 892, 931, 1001, 1084, 1205
Tru1I TTAA 1 cut(s) 1179
Tru9I TTAA 1 cut(s) 1179
TseFI GTSAC 1 cut(s) 657
TseI GCWGC 1 cut(s) 796
Tsp45I GTSAC 1 cut(s) 657
TspDTI ATGAA 5 cut(s) 356, 509, 639, 995, 1071
VpaK11BI GGWCC 1 cut(s) 418
XapI RAATTY 3 cut(s) 59, 872, 915
XbaI TCTAGA 1 cut(s) 1087
XceI RCATGY 1 cut(s) 133
XcmI CCANNNNNNNNNTGG 1 cut(s) 364
XspI CTAG 2 cut(s) 582, 1088
ZraI GACGTC 1 cut(s) 172
Zsp2I ATGCAT 1 cut(s) 512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.