Rh6DG203900

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000113
Physical Location & Seq
Reverse (-)
36233174 .. 36235036
1863 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG203900.1

Sequence Viewer

Length: 1272 bp
ATGAAAATGGAAACAAGCAGCAGCAGCAGCTCATTTCCCATTACTAGCAAAGATCTTCCTTGCGATATCATAGAGGAAATTCTGCTGCAGCTGCCGGTCAAGTCGCTGCTCCGTTTCAAATGCGTGAGCAAATCATGGCTTAATCTCATCTCCGACCACAAATTCATCAAGTCACACCTTCACCACTCCACCAAACAACACCCTCACCACGATGATGATGACGGTGATCGAATATCAAACGCACATCTCATGCTCTCCTCAACAACCCTCATTCACTCCCTCCATCTACAGCTACCCAATACTCGTACCAAACAAGAAGAAGAAGCGCCAGCTGCTGCTGCTGCAACTGATGCAGTAGTACTCGAGTCCATGGTGGAGTACCCGGTGGCGTCGACGGTGAGGCGGCCAGCTGTCAAAGACATCAAGATCGTCGGTTCCTGCAACGGCTTGCTATGCTTGGTGCTCGACTCCCAACACATGATCATATACAACCCCTCCACCAGGCACGTTCAAGAAGTCCCCAGCCCGGAGGAAACTGTAGTTGGTAGAGACTACTTTTACGGTTTCGGTTATGATTGTCACAACGACGACTGTAAAATAGTGAGGGCCACTTCTTCAAGTAGGGATGGAAATTTCGTCACCCAACTTGACATCTTTACTTTGAAGACCAACTCTTGGCGAACAAAAACCAAAACCCTACCCTTTTATTTCATGTCCAGCGTGGTGGGTACCCTTCTTAATGGGGCTCTCCACTGGGCAGTCCGTCGAGGAATCAACATCAGTCCTTCTGACGGCGATGACCATGACCCGAGGCCTTTCGGGATAGTCTCCTTTGATCTGACGGAGGAGACTTACAAAGAAGTACCCCTGCCGTGTGACGGTGACAAGCATTTCTCTTTCTATGGATTGGGGGTTTTAGGAGGGTGTCTGAGTATGCTCCACAGCCCCCACGGTTCTGATTATCAAGTGTGGGTTATGAAGGAATATGGAGTCAAGGCGTCTTGGAGCGTATTCACAACCATCCCACAGAAGATGGAGGATTCTAAGGAGTACATGGGACTGATGTCGCTTTTGTGCGTTTTGAAGAACGGCGAAATTCTAATGATGTTGCACAACCACAAAAAGGTTGTGATATACAATCCCGGACAAAGGAAATTTCGAACCATATTCAATGGGGAAATACGCTCTTCCCAAGTGGCCTTATACCTCGAGACTCTAGTTTCAACAAAAATATATGCACCATCCTCATCACCATGCATCCTAGCTACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

423

Amino Acids

47.41

Weight (kDa)

6.57

Isoelectric Point (pI)

54.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 56 1.2e-09 F-box domain
FBA_1 PF07734 138 - 408 1.9e-29 F-box associated beta propeller domain
FBA_3 PF08268 140 - 397 1.5e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 728
AccB1I GGYRCC 1 cut(s) 728
AccB7I CCANNNNNTGG 1 cut(s) 675
AccI GTMKAC 1 cut(s) 392
AciI CCGC 1 cut(s) 403
AcoI YGGCCR 1 cut(s) 404
AcsI RAATTY 5 cut(s) 78, 161, 631, 1095, 1154
AcyI GRCGYC 2 cut(s) 389, 998
AfaI GTAC 6 cut(s) 307, 360, 380, 730, 864, 1052
AfiI CCNNNNNNNGG 7 cut(s) 501, 526, 675, 791, 878, 1123, 1149
AgsI TTSAA 7 cut(s) 118, 512, 618, 664, 1084, 1171, 1224
AjnI CCWGG 1 cut(s) 500
AjuI GAANNNNNNNTTGG 2 cut(s) 525, 557
AluBI AGCT 6 cut(s) 30, 91, 292, 332, 410, 1265
AluI AGCT 6 cut(s) 30, 91, 292, 332, 410, 1265
Alw21I GWGCWC 1 cut(s) 465
Alw26I GTCTC 4 cut(s) 543, 832, 842, 1205
AlwNI CAGNNNCTG 1 cut(s) 335
Ama87I CYCGRG 3 cut(s) 362, 808, 1208
AoxI GGCC 4 cut(s) 404, 606, 812, 1197
ApoI RAATTY 5 cut(s) 78, 161, 631, 1095, 1154
Asp718I GGTACC 1 cut(s) 728
AspLEI GCGC 1 cut(s) 328
AspS9I GGNCC 1 cut(s) 606
AsuC2I CCSGG 3 cut(s) 383, 527, 1143
AsuHPI GGTGA 7 cut(s) 173, 197, 236, 409, 631, 893, 1242
AsuII TTCGAA 1 cut(s) 1159
AvaI CYCGRG 3 cut(s) 362, 808, 1208
BanI GGYRCC 1 cut(s) 728
BanII GRGCYC 1 cut(s) 748
BbsI GAAGAC 1 cut(s) 671
Bbv12I GWGCWC 1 cut(s) 465
BccI CCATC 5 cut(s) 291, 620, 1027, 1028, 1249
BceAI ACGGC 4 cut(s) 460, 808, 856, 1105
BciT130I CCWGG 1 cut(s) 502
BclI TGATCA 1 cut(s) 480
BcnI CCSGG 3 cut(s) 383, 527, 1143
BcoDI GTCTC 4 cut(s) 543, 832, 842, 1205
BfaI CTAG 4 cut(s) 45, 1217, 1262, 1270
BfmI CTRYAG 3 cut(s) 86, 287, 537
BfoI RGCGCY 1 cut(s) 329
BglII AGATCT 1 cut(s) 52
BmcAI AGTACT 1 cut(s) 360
Bme1390I CCNGG 4 cut(s) 383, 502, 527, 1143
BmeT110I CYCGRG 3 cut(s) 362, 808, 1208
BmgT120I GGNCC 1 cut(s) 606
BmiI GGNNCC 2 cut(s) 436, 730
BmrFI CCNGG 4 cut(s) 383, 502, 527, 1143
BmrI ACTGGG 1 cut(s) 763
BmsI GCATC 2 cut(s) 340, 1266
BmuI ACTGGG 1 cut(s) 763
BoxI GACNNNNGTC 1 cut(s) 1063
BpiI GAAGAC 1 cut(s) 671
Bpu14I TTCGAA 1 cut(s) 1159
BpuMI CCSGG 3 cut(s) 383, 527, 1143
BsaHI GRCGYC 2 cut(s) 389, 998
BsaJI CCNNGG 3 cut(s) 369, 809, 949
BsaXI ACNNNNNCTCC 2 cut(s) 479, 509
Bsc4I CCNNNNNNNGG 7 cut(s) 501, 526, 675, 791, 878, 1123, 1149
Bse118I RCCGGY 1 cut(s) 94
Bse1I ACTGG 1 cut(s) 758
BseBI CCWGG 1 cut(s) 502
BseDI CCNNGG 3 cut(s) 369, 809, 949
BseGI GGATG 4 cut(s) 631, 1020, 1241, 1257
BseLI CCNNNNNNNGG 7 cut(s) 501, 526, 675, 791, 878, 1123, 1149
BseMII CTCAG 1 cut(s) 920
BseNI ACTGG 1 cut(s) 758
BseRI GAGGAG 2 cut(s) 247, 860
BseYI CCCAGC 1 cut(s) 521
BshFI GGCC 4 cut(s) 406, 608, 814, 1199
BshNI GGYRCC 1 cut(s) 728
BsiHKAI GWGCWC 1 cut(s) 465
BsiHKCI CYCGRG 3 cut(s) 362, 808, 1208
BsiSI CCGG 4 cut(s) 95, 383, 527, 1143
BslFI GGGAC 2 cut(s) 503, 1071
BslI CCNNNNNNNGG 7 cut(s) 501, 526, 675, 791, 878, 1123, 1149
BsmAI GTCTC 4 cut(s) 543, 832, 842, 1205
BsmFI GGGAC 2 cut(s) 503, 1071
BsnI GGCC 4 cut(s) 406, 608, 814, 1199
BsoBI CYCGRG 3 cut(s) 362, 808, 1208
Bsp119I TTCGAA 1 cut(s) 1159
Bsp1286I GDGCHC 2 cut(s) 465, 748
Bsp143I GATC 5 cut(s) 52, 226, 426, 480, 835
Bsp19I CCATGG 1 cut(s) 369
BspACI CCGC 1 cut(s) 403
BspANI GGCC 4 cut(s) 406, 608, 814, 1199
BspCNI CTCAG 1 cut(s) 921
BspLI GGNNCC 2 cut(s) 436, 730
BspMAI CTGCAG 1 cut(s) 90
BspQI GCTCTTC 1 cut(s) 1192
BspT104I TTCGAA 1 cut(s) 1159
BspT107I GGYRCC 1 cut(s) 728
BsrFI RCCGGY 1 cut(s) 94
BsrI ACTGG 1 cut(s) 758
BssAI RCCGGY 1 cut(s) 94
BssECI CCNNGG 3 cut(s) 369, 809, 949
BssMI GATC 5 cut(s) 52, 226, 426, 480, 835
BssNI GRCGYC 2 cut(s) 389, 998
BssT1I CCWWGG 1 cut(s) 369
Bst2UI CCWGG 1 cut(s) 502
Bst4CI ACNGT 7 cut(s) 224, 397, 538, 563, 593, 881, 953
Bst6I CTCTTC 1 cut(s) 1192
BstACI GRCGYC 2 cut(s) 389, 998
BstAPI GCANNNNNTGC 1 cut(s) 350
BstBI TTCGAA 1 cut(s) 1159
BstC8I GCNNGC 3 cut(s) 330, 408, 449
BstDEI CTNAG 2 cut(s) 929, 1044
BstDSI CCRYGG 2 cut(s) 369, 949
BstENI CCTNNNNNAGG 1 cut(s) 499
BstF5I GGATG 4 cut(s) 631, 1020, 1241, 1257
BstH2I RGCGCY 1 cut(s) 329
BstHHI GCGC 1 cut(s) 328
BstKTI GATC 5 cut(s) 55, 229, 429, 483, 838
BstMAI GTCTC 4 cut(s) 543, 832, 842, 1205
BstMBI GATC 5 cut(s) 52, 226, 426, 480, 835
BstMWI GCNNNNNNNGC 8 cut(s) 24, 27, 91, 332, 338, 341, 350, 453
BstNI CCWGG 1 cut(s) 502
BstPAI GACNNNNGTC 1 cut(s) 1063
BstSCI CCNGG 4 cut(s) 381, 500, 525, 1141
BstSFI CTRYAG 3 cut(s) 86, 287, 537
BstV2I GAAGAC 1 cut(s) 671
BstX2I RGATCY 1 cut(s) 52
BstXI CCANNNNNNTGG 1 cut(s) 724
BstYI RGATCY 1 cut(s) 52
BsuRI GGCC 4 cut(s) 406, 608, 814, 1199
BtgI CCRYGG 2 cut(s) 369, 949
BtgZI GCGATG 1 cut(s) 810
BtsCI GGATG 4 cut(s) 631, 1020, 1241, 1257
BtsIMutI CAGTG 1 cut(s) 751
Cac8I GCNNGC 3 cut(s) 330, 408, 449
CaiI CAGNNNCTG 1 cut(s) 335
CfoI GCGC 1 cut(s) 328
Cfr10I RCCGGY 1 cut(s) 94
Cfr13I GGNCC 1 cut(s) 606
CseI GACGC 2 cut(s) 378, 987
Csp6I GTAC 6 cut(s) 306, 359, 379, 729, 863, 1051
CviAII CATG 8 cut(s) 135, 250, 370, 478, 712, 803, 1054, 1254
CviQI GTAC 6 cut(s) 306, 359, 379, 729, 863, 1051
DdeI CTNAG 2 cut(s) 929, 1044
DpnI GATC 5 cut(s) 54, 228, 428, 482, 837
DpnII GATC 5 cut(s) 52, 226, 426, 480, 835
EaeI YGGCCR 1 cut(s) 404
Eam1104I CTCTTC 1 cut(s) 1192
EarI CTCTTC 1 cut(s) 1192
Eco130I CCWWGG 1 cut(s) 369
Eco147I AGGCCT 1 cut(s) 814
Eco24I GRGCYC 1 cut(s) 748
Eco32I GATATC 1 cut(s) 67
Eco88I CYCGRG 3 cut(s) 362, 808, 1208
EcoNI CCTNNNNNAGG 1 cut(s) 499
EcoRII CCWGG 1 cut(s) 500
EcoRV GATATC 1 cut(s) 67
EcoT14I CCWWGG 1 cut(s) 369
EcoT22I ATGCAT 1 cut(s) 1259
EcoT38I GRGCYC 1 cut(s) 748
ErhI CCWWGG 1 cut(s) 369
FaeI CATG 8 cut(s) 138, 253, 373, 481, 715, 806, 1057, 1257
FaqI GGGAC 2 cut(s) 503, 1071
FatI CATG 8 cut(s) 134, 249, 369, 477, 711, 802, 1053, 1253
FbaI TGATCA 1 cut(s) 480
FblI GTMKAC 1 cut(s) 392
FokI GGATG 4 cut(s) 638, 1007, 1228, 1244
FriOI GRGCYC 1 cut(s) 748
FspBI CTAG 4 cut(s) 45, 1217, 1262, 1270
GlaI GCGC 1 cut(s) 327
GsaI CCCAGC 1 cut(s) 525
HaeII RGCGCY 1 cut(s) 329
HaeIII GGCC 4 cut(s) 406, 608, 814, 1199
HapII CCGG 4 cut(s) 95, 383, 527, 1143
HgaI GACGC 2 cut(s) 378, 987
HhaI GCGC 1 cut(s) 328
Hin1I GRCGYC 2 cut(s) 389, 998
Hin1II CATG 8 cut(s) 138, 253, 373, 481, 715, 806, 1057, 1257
Hin6I GCGC 1 cut(s) 326
HinP1I GCGC 1 cut(s) 326
HincII GTYRAC 1 cut(s) 393
HindII GTYRAC 1 cut(s) 393
HinfI GANTC 6 cut(s) 365, 467, 771, 990, 1040, 1213
HpaII CCGG 4 cut(s) 95, 383, 527, 1143
HphI GGTGA 7 cut(s) 173, 197, 236, 409, 631, 893, 1242
Hpy166II GTNNAC 1 cut(s) 393
Hpy188I TCNGA 5 cut(s) 154, 790, 840, 930, 958
Hpy188III TCNNGA 4 cut(s) 424, 512, 820, 1210
Hpy8I GTNNAC 1 cut(s) 393
Hpy99I CGWCG 5 cut(s) 394, 397, 434, 590, 768
HpyAV CCTTC 4 cut(s) 188, 743, 795, 973
HpyCH4III ACNGT 7 cut(s) 224, 397, 538, 563, 593, 881, 953
HpyCH4IV ACGT 1 cut(s) 507
HpyCH4V TGCA 7 cut(s) 88, 344, 353, 441, 1111, 1238, 1257
HpyF10VI GCNNNNNNNGC 8 cut(s) 24, 27, 91, 332, 338, 341, 350, 453
HpyF3I CTNAG 2 cut(s) 929, 1044
HpySE526I ACGT 1 cut(s) 507
Hsp92I GRCGYC 2 cut(s) 389, 998
Hsp92II CATG 8 cut(s) 138, 253, 373, 481, 715, 806, 1057, 1257
HspAI GCGC 1 cut(s) 326
KpnI GGTACC 1 cut(s) 732
Ksp22I TGATCA 1 cut(s) 480
Kzo9I GATC 5 cut(s) 52, 226, 426, 480, 835
LguI GCTCTTC 1 cut(s) 1192
LmnI GCTCC 3 cut(s) 114, 942, 1005
LweI GCATC 2 cut(s) 340, 1266
MaeI CTAG 4 cut(s) 45, 1217, 1262, 1270
MaeII ACGT 1 cut(s) 507
MaeIII GTNAC 5 cut(s) 171, 578, 637, 875, 881
MalI GATC 5 cut(s) 54, 228, 428, 482, 837
MboI GATC 5 cut(s) 52, 226, 426, 480, 835
MboII GAAGA 8 cut(s) 47, 329, 332, 606, 676, 1042, 1096, 1179
MflI RGATCY 1 cut(s) 52
MhlI GDGCHC 2 cut(s) 465, 748
MluCI AATT 5 cut(s) 78, 161, 631, 1095, 1154
MlyI GAGTC 4 cut(s) 374, 461, 999, 1207
MmeI TCCRAC 1 cut(s) 177
Mph1103I ATGCAT 1 cut(s) 1259
MseI TTAA 2 cut(s) 141, 738
MslI CAYNNNNRTG 3 cut(s) 210, 213, 1252
MspA1I CMGCKG 3 cut(s) 91, 332, 410
MspI CCGG 4 cut(s) 95, 383, 527, 1143
MspR9I CCNGG 4 cut(s) 383, 502, 527, 1143
MvaI CCWGG 1 cut(s) 502
MwoI GCNNNNNNNGC 8 cut(s) 24, 27, 91, 332, 338, 341, 350, 453
NciI CCSGG 3 cut(s) 383, 527, 1143
NcoI CCATGG 1 cut(s) 369
NdeII GATC 5 cut(s) 52, 226, 426, 480, 835
NlaIII CATG 8 cut(s) 138, 253, 373, 481, 715, 806, 1057, 1257
NlaIV GGNNCC 2 cut(s) 436, 730
NmuCI GTSAC 5 cut(s) 171, 578, 637, 875, 881
NsiI ATGCAT 1 cut(s) 1259
NspV TTCGAA 1 cut(s) 1159
PaeR7I CTCGAG 2 cut(s) 362, 1208
PceI AGGCCT 1 cut(s) 814
PciSI GCTCTTC 1 cut(s) 1192
PfeI GAWTC 2 cut(s) 771, 1040
PflMI CCANNNNNTGG 1 cut(s) 675
PfoI TCCNGGA 1 cut(s) 1141
PleI GAGTC 4 cut(s) 373, 461, 998, 1207
PpsI GAGTC 4 cut(s) 373, 461, 998, 1207
PshAI GACNNNNGTC 1 cut(s) 1063
Psp6I CCWGG 1 cut(s) 500
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 1 cut(s) 500
PspN4I GGNNCC 2 cut(s) 436, 730
PspPI GGNCC 1 cut(s) 606
PspXI VCTCGAGB 1 cut(s) 362
PstI CTGCAG 1 cut(s) 90
PstNI CAGNNNCTG 1 cut(s) 335
PsuI RGATCY 1 cut(s) 52
PvuII CAGCTG 3 cut(s) 91, 332, 410
RsaI GTAC 6 cut(s) 307, 360, 380, 730, 864, 1052
RsaNI GTAC 6 cut(s) 306, 359, 379, 729, 863, 1051
RseI CAYNNNNRTG 3 cut(s) 210, 213, 1252
SalI GTCGAC 1 cut(s) 391
SapI GCTCTTC 1 cut(s) 1192
SaqAI TTAA 2 cut(s) 141, 738
Sau3AI GATC 5 cut(s) 52, 226, 426, 480, 835
Sau96I GGNCC 1 cut(s) 606
ScaI AGTACT 1 cut(s) 360
SchI GAGTC 4 cut(s) 374, 461, 999, 1207
ScrFI CCNGG 4 cut(s) 383, 502, 527, 1143
SduI GDGCHC 2 cut(s) 465, 748
SfaNI GCATC 2 cut(s) 340, 1266
SfcI CTRYAG 3 cut(s) 86, 287, 537
Sfr274I CTCGAG 2 cut(s) 362, 1208
SfuI TTCGAA 1 cut(s) 1159
SgrDI CGTCGACG 1 cut(s) 391
SlaI CTCGAG 2 cut(s) 362, 1208
SmiMI CAYNNNNRTG 3 cut(s) 210, 213, 1252
SmlI CTYRAG 2 cut(s) 362, 1208
SmoI CTYRAG 2 cut(s) 362, 1208
Sse9I AATT 5 cut(s) 78, 161, 631, 1095, 1154
SseBI AGGCCT 1 cut(s) 814
SsiI CCGC 1 cut(s) 403
SspMI CTAG 4 cut(s) 45, 1217, 1262, 1270
StuI AGGCCT 1 cut(s) 814
StyD4I CCNGG 4 cut(s) 381, 500, 525, 1141
StyI CCWWGG 1 cut(s) 369
TaaI ACNGT 7 cut(s) 224, 397, 538, 563, 593, 881, 953
TaiI ACGT 1 cut(s) 510
TaqI TCGA 7 cut(s) 229, 363, 392, 465, 766, 1159, 1209
TasI AATT 5 cut(s) 78, 161, 631, 1095, 1154
TatI WGTACW 2 cut(s) 358, 1050
TauI GCSGC 1 cut(s) 406
TfiI GAWTC 2 cut(s) 771, 1040
Tru1I TTAA 2 cut(s) 141, 738
Tru9I TTAA 2 cut(s) 141, 738
TscAI CASTG 1 cut(s) 758
TseFI GTSAC 5 cut(s) 171, 578, 637, 875, 881
Tsp45I GTSAC 5 cut(s) 171, 578, 637, 875, 881
TspDTI ATGAA 4 cut(s) 17, 154, 700, 992
TspGWI ACGGA 3 cut(s) 101, 752, 857
TspRI CASTG 1 cut(s) 758
Van91I CCANNNNNTGG 1 cut(s) 675
XagI CCTNNNNNAGG 1 cut(s) 499
XapI RAATTY 5 cut(s) 78, 161, 631, 1095, 1154
XhoI CTCGAG 2 cut(s) 362, 1208
XmiI GTMKAC 1 cut(s) 392
XspI CTAG 4 cut(s) 45, 1217, 1262, 1270
ZrmI AGTACT 1 cut(s) 360
Zsp2I ATGCAT 1 cut(s) 1259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.