Rroxscaffold_2G00094190

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000113
Physical Location & Seq
Forward (+)
15490466 .. 15515746
25281 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094190.1

Sequence Viewer

Length: 1242 bp
ATGTCGGACGCTCTCAGCAGTCGGCGGCAGCAACAAGTAGTTCTCTCCGGTACCGCACTTTGTTTTAGTTCTGAGTCCCTTGATTTAGATTGTGTCATTGTCGAGATCCTCTCATGGCTACCGGCCAAATCTCTTCTCCGATTCCGGTGCGTATGCAAAGCATGGCGGGCCTTGATCTCCGATCCTTATTTCATCAGAAAACACCTCAGCCACATCAACACCAAAATCACCACCAGCTATTCTCTCCTACTCAAAGAACAAATTTTCCGATCCGTAGAGTACGAAGCAATATTGAAGTATTTGAGCCTTGAGGGTCCTCTTCCGAGCAGAAGGCTTGATTTTCCGGTACTTGATCCACCGTTTGATATTCCTAATATTGAAATCGTTGGTAGTTGCAATGGGTTGATATGTCTAGTACTTGATATTTTTGGTATTGATGCTAGAGAAACCTATACCTTTATGTTATGGAATCCTTGTACTGGCGAATCACAGGTCCTACCACAAACTCCCCTTCATTCCTTCGAACGATGTTTCTGGGGGTTCGGTTATGATTCAACCACTGATGATTACAAAGTAATACTGGGAAGCTATAAATCTGGTTATGAATTTGTTGTTGTCTTTATGCTAAAAGGGGGTTCATGGAGGAAGCTTGAAAGGCTCAACAAGTATTTCGGGGTGAGCGGGGCAGGGTGTTCAGTTAACGAAGCTTTGCATTGGGTATTGAGGGAACAGGAAGATGGTAGGTTTATTGATTCAAGAATAGTGTCATTTGATTTAGCGGAGGAGAAATTTCATGAGATTCCGTTCCCCTATCCTCCCAATCCAGTAGACAGCCATGAATTGTTTGCCGGCGTTGGAATTCTTAATAATTGCCTAACTCTGGCCTTTCAAACCATGTGTGGCCGACTTGGGTGCAACTTTAAGATGTGGGTGATGAAGGACTATGGAGTCGAGGAATCTTGGAGTGAAGTTATAAACATCCCTTCAGGGATTGCAGAGGATGAGTATGTGTTCTTCACATGCATTTCTGAGAATGATAATGAGTATACATGCATGGCATGCATTTCTGATAATGGCGAGATTTTGATGCAGCTGGAAGTTGTAGGCCCCTTGGCATTATATAATCCCAAGGAAAAGACATATAAGACTCTCATGGGCTATGGTGGTTACTGGTATGAAACTGCTACTTATATAGAAACTTTAATTTCACCATTAACCGGCAGTACTGGCGCAGTCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

413

Amino Acids

46.8

Weight (kDa)

4.86

Isoelectric Point (pI)

43.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 31 - 66 8.6e-10 F-box domain
F-box-like PF12937 32 - 67 1.8e-08 F-box-like
FBA_1 PF07734 124 - 330 6.1e-20 F-box associated beta propeller domain
FBA_3 PF08268 127 - 382 1.2e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 974
AasI GACNNNNNNGTC 1 cut(s) 947
Acc65I GGTACC 1 cut(s) 50
AccB1I GGYRCC 1 cut(s) 50
AccBSI CCGCTC 1 cut(s) 681
AccI GTMKAC 2 cut(s) 828, 1046
AciI CCGC 5 cut(s) 25, 54, 166, 681, 779
AclWI GGATC 4 cut(s) 100, 176, 264, 347
AcoI YGGCCR 2 cut(s) 123, 901
AcsI RAATTY 4 cut(s) 261, 605, 788, 858
AcuI CTGAAG 1 cut(s) 969
AfaI GTAC 6 cut(s) 52, 281, 348, 417, 478, 1225
AfiI CCNNNNNNNGG 3 cut(s) 479, 880, 1217
AgsI TTSAA 6 cut(s) 295, 380, 555, 653, 756, 890
AloI GAACNNNNNNTCC 2 cut(s) 249, 281
AluBI AGCT 5 cut(s) 237, 588, 649, 707, 1093
AluI AGCT 5 cut(s) 237, 588, 649, 707, 1093
AlwI GGATC 4 cut(s) 100, 176, 264, 347
AoxI GGCC 5 cut(s) 123, 168, 882, 901, 1105
ApeKI GCWGC 2 cut(s) 28, 1090
ApoI RAATTY 4 cut(s) 261, 605, 788, 858
ArsI GACNNNNNNTTYG 2 cut(s) 477, 509
Asp718I GGTACC 1 cut(s) 50
AspLEI GCGC 1 cut(s) 1232
AspS9I GGNCC 4 cut(s) 168, 314, 493, 1106
AsuHPI GGTGA 4 cut(s) 220, 688, 943, 1200
AsuII TTCGAA 1 cut(s) 522
AvaII GGWCC 2 cut(s) 314, 493
BanI GGYRCC 1 cut(s) 50
BarI GAAGNNNNNNTAC 2 cut(s) 998, 1030
BbvCI CCTCAGC 1 cut(s) 206
BbvI GCAGC 2 cut(s) 40, 1102
BccI CCATC 1 cut(s) 731
BcgI CGANNNNNNTGC 4 cut(s) 129, 163, 894, 928
BfaI CTAG 2 cut(s) 413, 441
BisI GCNGC 3 cut(s) 26, 29, 1091
BlsI GCNGC 3 cut(s) 27, 30, 1092
BmcAI AGTACT 2 cut(s) 417, 1225
Bme18I GGWCC 2 cut(s) 314, 493
BmgT120I GGNCC 4 cut(s) 168, 314, 493, 1106
BmiI GGNNCC 3 cut(s) 52, 315, 1108
BmrI ACTGGG 1 cut(s) 590
BmsI GCATC 2 cut(s) 427, 1077
BmuI ACTGGG 1 cut(s) 590
BplI GAGNNNNNCTC 2 cut(s) 95, 127
Bpu10I CCTNAGC 1 cut(s) 206
Bpu14I TTCGAA 1 cut(s) 522
BpuEI CTTGAG 1 cut(s) 329
BsaJI CCNNGG 2 cut(s) 1110, 1128
BsaWI WCCGGW 3 cut(s) 47, 144, 343
Bsc4I CCNNNNNNNGG 3 cut(s) 479, 880, 1217
Bse118I RCCGGY 3 cut(s) 121, 848, 1217
Bse1I ACTGG 5 cut(s) 484, 585, 824, 1175, 1231
Bse3DI GCAATG 1 cut(s) 403
BseDI CCNNGG 2 cut(s) 1110, 1128
BseGI GGATG 2 cut(s) 978, 1006
BseLI CCNNNNNNNGG 3 cut(s) 479, 880, 1217
BseMI GCAATG 1 cut(s) 403
BseMII CTCAG 4 cut(s) 28, 63, 220, 1020
BseNI ACTGG 5 cut(s) 484, 585, 824, 1175, 1231
BseRI GAGGAG 1 cut(s) 797
BseXI GCAGC 2 cut(s) 40, 1102
BshFI GGCC 5 cut(s) 125, 170, 884, 903, 1107
BshNI GGYRCC 1 cut(s) 50
BsiSI CCGG 6 cut(s) 48, 122, 145, 344, 849, 1218
BslFI GGGAC 1 cut(s) 61
BslI CCNNNNNNNGG 3 cut(s) 479, 880, 1217
BsmFI GGGAC 1 cut(s) 61
BsnI GGCC 5 cut(s) 125, 170, 884, 903, 1107
Bsp119I TTCGAA 1 cut(s) 522
Bsp143I GATC 5 cut(s) 105, 174, 181, 269, 352
BspACI CCGC 5 cut(s) 25, 54, 166, 681, 779
BspANI GGCC 5 cut(s) 125, 170, 884, 903, 1107
BspCNI CTCAG 4 cut(s) 27, 64, 219, 1021
BspHI TCATGA 1 cut(s) 793
BspLI GGNNCC 3 cut(s) 52, 315, 1108
BspPI GGATC 4 cut(s) 100, 176, 264, 347
BspT104I TTCGAA 1 cut(s) 522
BspT107I GGYRCC 1 cut(s) 50
BsrBI CCGCTC 1 cut(s) 681
BsrDI GCAATG 1 cut(s) 403
BsrFI RCCGGY 3 cut(s) 121, 848, 1217
BsrI ACTGG 5 cut(s) 484, 585, 824, 1175, 1231
BssAI RCCGGY 3 cut(s) 121, 848, 1217
BssECI CCNNGG 2 cut(s) 1110, 1128
BssMI GATC 5 cut(s) 105, 174, 181, 269, 352
BssNAI GTATAC 1 cut(s) 1047
BssT1I CCWWGG 2 cut(s) 1110, 1128
Bst1107I GTATAC 1 cut(s) 1047
Bst4CI ACNGT 1 cut(s) 360
Bst6I CTCTTC 2 cut(s) 138, 324
BstAPI GCANNNNNTGC 1 cut(s) 1059
BstBI TTCGAA 1 cut(s) 522
BstC8I GCNNGC 3 cut(s) 168, 850, 1060
BstDEI CTNAG 4 cut(s) 14, 72, 206, 1029
BstF5I GGATG 2 cut(s) 978, 1006
BstHHI GCGC 1 cut(s) 1232
BstKTI GATC 5 cut(s) 108, 177, 184, 272, 355
BstMBI GATC 5 cut(s) 105, 174, 181, 269, 352
BstMWI GCNNNNNNNGC 4 cut(s) 167, 655, 1059, 1227
BstNSI RCATGY 3 cut(s) 1023, 1053, 1062
BstV1I GCAGC 2 cut(s) 40, 1102
BstX2I RGATCY 1 cut(s) 105
BstYI RGATCY 1 cut(s) 105
BstZ17I GTATAC 1 cut(s) 1047
BsuRI GGCC 5 cut(s) 125, 170, 884, 903, 1107
BtsCI GGATG 2 cut(s) 978, 1006
BtsIMutI CAGTG 1 cut(s) 558
Cac8I GCNNGC 3 cut(s) 168, 850, 1060
CciI TCATGA 1 cut(s) 793
CfoI GCGC 1 cut(s) 1232
Cfr10I RCCGGY 3 cut(s) 121, 848, 1217
Cfr13I GGNCC 4 cut(s) 168, 314, 493, 1106
CseI GACGC 1 cut(s) 17
Csp6I GTAC 6 cut(s) 51, 280, 347, 416, 477, 1224
CviQI GTAC 6 cut(s) 51, 280, 347, 416, 477, 1224
DdeI CTNAG 4 cut(s) 14, 72, 206, 1029
DpnI GATC 5 cut(s) 107, 176, 183, 271, 354
DpnII GATC 5 cut(s) 105, 174, 181, 269, 352
DrdI GACNNNNNNGTC 1 cut(s) 947
DseDI GACNNNNNNGTC 1 cut(s) 947
EaeI YGGCCR 2 cut(s) 123, 901
Eam1104I CTCTTC 2 cut(s) 138, 324
EarI CTCTTC 2 cut(s) 138, 324
Eco130I CCWWGG 2 cut(s) 1110, 1128
Eco47I GGWCC 2 cut(s) 314, 493
Eco57I CTGAAG 1 cut(s) 969
EcoO109I RGGNCCY 3 cut(s) 314, 493, 1106
EcoRI GAATTC 1 cut(s) 858
EcoT14I CCWWGG 2 cut(s) 1110, 1128
EcoT22I ATGCAT 3 cut(s) 1025, 1055, 1064
ErhI CCWWGG 2 cut(s) 1110, 1128
FaqI GGGAC 1 cut(s) 61
FauI CCCGC 2 cut(s) 159, 674
FblI GTMKAC 2 cut(s) 828, 1046
Fnu4HI GCNGC 3 cut(s) 26, 29, 1091
FokI GGATG 2 cut(s) 965, 1013
Fsp4HI GCNGC 3 cut(s) 26, 29, 1091
FspBI CTAG 2 cut(s) 413, 441
GlaI GCGC 1 cut(s) 1231
GluI GCNGC 3 cut(s) 26, 29, 1091
HaeIII GGCC 5 cut(s) 125, 170, 884, 903, 1107
HapII CCGG 6 cut(s) 48, 122, 145, 344, 849, 1218
HgaI GACGC 1 cut(s) 17
HhaI GCGC 1 cut(s) 1232
Hin6I GCGC 1 cut(s) 1230
HinP1I GCGC 1 cut(s) 1230
HincII GTYRAC 1 cut(s) 700
HindII GTYRAC 1 cut(s) 700
HindIII AAGCTT 2 cut(s) 647, 705
HpaI GTTAAC 1 cut(s) 700
HpaII CCGG 6 cut(s) 48, 122, 145, 344, 849, 1218
HphI GGTGA 4 cut(s) 220, 688, 943, 1200
Hpy166II GTNNAC 3 cut(s) 700, 829, 1047
Hpy188I TCNGA 9 cut(s) 7, 73, 140, 181, 197, 269, 324, 1030, 1069
Hpy188III TCNNGA 3 cut(s) 103, 756, 794
Hpy8I GTNNAC 3 cut(s) 700, 829, 1047
HpyAV CCTTC 5 cut(s) 324, 521, 529, 931, 993
HpyCH4III ACNGT 1 cut(s) 360
HpyCH4V TGCA 9 cut(s) 156, 396, 712, 915, 995, 1023, 1053, 1062, 1090
HpyF10VI GCNNNNNNNGC 4 cut(s) 167, 655, 1059, 1227
HpyF3I CTNAG 4 cut(s) 14, 72, 206, 1029
HspAI GCGC 1 cut(s) 1230
KpnI GGTACC 1 cut(s) 54
KroI GCCGGC 1 cut(s) 848
KroNI GCCGGC 1 cut(s) 850
KspAI GTTAAC 1 cut(s) 700
Kzo9I GATC 5 cut(s) 105, 174, 181, 269, 352
Lsp1109I GCAGC 2 cut(s) 40, 1102
LweI GCATC 2 cut(s) 427, 1077
MaeI CTAG 2 cut(s) 413, 441
MaeIII GTNAC 1 cut(s) 1166
MalI GATC 5 cut(s) 107, 176, 183, 271, 354
MbiI CCGCTC 1 cut(s) 681
MboI GATC 5 cut(s) 105, 174, 181, 269, 352
MboII GAAGA 4 cut(s) 125, 311, 746, 1006
MflI RGATCY 1 cut(s) 105
MluCI AATT 7 cut(s) 261, 605, 788, 839, 858, 868, 1203
MlyI GAGTC 3 cut(s) 83, 957, 1141
MmeI TCCRAC 1 cut(s) 835
Mph1103I ATGCAT 3 cut(s) 1025, 1055, 1064
MroNI GCCGGC 1 cut(s) 848
MseI TTAA 5 cut(s) 699, 864, 921, 1202, 1214
MspA1I CMGCKG 1 cut(s) 1093
MspI CCGG 6 cut(s) 48, 122, 145, 344, 849, 1218
MwoI GCNNNNNNNGC 4 cut(s) 167, 655, 1059, 1227
NaeI GCCGGC 1 cut(s) 850
NdeII GATC 5 cut(s) 105, 174, 181, 269, 352
NgoMIV GCCGGC 1 cut(s) 848
NlaIV GGNNCC 3 cut(s) 52, 315, 1108
NsiI ATGCAT 3 cut(s) 1025, 1055, 1064
NspI RCATGY 3 cut(s) 1023, 1053, 1062
NspV TTCGAA 1 cut(s) 522
PaeI GCATGC 1 cut(s) 1062
PagI TCATGA 1 cut(s) 793
PdiI GCCGGC 1 cut(s) 850
PfeI GAWTC 7 cut(s) 141, 469, 485, 551, 752, 799, 956
PkrI GCNGC 3 cut(s) 27, 30, 1092
PleI GAGTC 3 cut(s) 82, 956, 1141
PpsI GAGTC 3 cut(s) 82, 956, 1141
PpuMI RGGWCCY 2 cut(s) 314, 493
PsiI TTATAA 1 cut(s) 974
Psp5II RGGWCCY 2 cut(s) 314, 493
PspN4I GGNNCC 3 cut(s) 52, 315, 1108
PspPI GGNCC 4 cut(s) 168, 314, 493, 1106
PspPPI RGGWCCY 2 cut(s) 314, 493
PsuI RGATCY 1 cut(s) 105
PvuII CAGCTG 1 cut(s) 1093
RsaI GTAC 6 cut(s) 52, 281, 348, 417, 478, 1225
RsaNI GTAC 6 cut(s) 51, 280, 347, 416, 477, 1224
SaqAI TTAA 5 cut(s) 699, 864, 921, 1202, 1214
SatI GCNGC 3 cut(s) 26, 29, 1091
Sau3AI GATC 5 cut(s) 105, 174, 181, 269, 352
Sau96I GGNCC 4 cut(s) 168, 314, 493, 1106
ScaI AGTACT 2 cut(s) 417, 1225
SchI GAGTC 3 cut(s) 83, 957, 1141
SfaNI GCATC 2 cut(s) 427, 1077
SfuI TTCGAA 1 cut(s) 522
SinI GGWCC 2 cut(s) 314, 493
SmlI CTYRAG 1 cut(s) 308
SmoI CTYRAG 1 cut(s) 308
SphI GCATGC 1 cut(s) 1062
Sse9I AATT 7 cut(s) 261, 605, 788, 839, 858, 868, 1203
SsiI CCGC 5 cut(s) 25, 54, 166, 681, 779
SspI AATATT 2 cut(s) 291, 376
SspMI CTAG 2 cut(s) 413, 441
StyI CCWWGG 2 cut(s) 1110, 1128
TaaI ACNGT 1 cut(s) 360
TaqI TCGA 3 cut(s) 102, 522, 951
TasI AATT 7 cut(s) 261, 605, 788, 839, 858, 868, 1203
TatI WGTACW 3 cut(s) 415, 476, 1223
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 7 cut(s) 141, 469, 485, 551, 752, 799, 956
Tru1I TTAA 5 cut(s) 699, 864, 921, 1202, 1214
Tru9I TTAA 5 cut(s) 699, 864, 921, 1202, 1214
TscAI CASTG 1 cut(s) 565
TseI GCWGC 2 cut(s) 28, 1090
TspDTI ATGAA 8 cut(s) 181, 503, 618, 627, 782, 852, 950, 1191
TspGWI ACGGA 2 cut(s) 262, 792
TspRI CASTG 1 cut(s) 565
VpaK11BI GGWCC 2 cut(s) 314, 493
XapI RAATTY 4 cut(s) 261, 605, 788, 858
XceI RCATGY 3 cut(s) 1023, 1053, 1062
XmiI GTMKAC 2 cut(s) 828, 1046
XspI CTAG 2 cut(s) 413, 441
ZrmI AGTACT 2 cut(s) 417, 1225
Zsp2I ATGCAT 3 cut(s) 1025, 1055, 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.