RchiOBHm_Chr2g0154711

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000113
Physical Location & Seq
Reverse (-)
71790579 .. 71792225
1647 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52368

Sequence Viewer

Length: 1182 bp
ATGTCCGACGCGCTCTCCATTCGCCGGCAACGCCAACTGGTTCTCTCCGGCACCGGACCATGCCCCGAGTCTTTCGATGCCATCATTATCGAGATCCTCTCATGGCTACCTGTCAAATCTTTGCTTCGTTTCCGTTGTGTATGCAAGGCATGGCGGGCACTGATCTCCCAGTCTTATTTCATCAAGAAGCACCTCATCCGCACCGAAATCAACGCCAGCTTCAAGCTTCTCGTCAAGGAGAGTTTCGTATTCAGGTCCATAGAGTACCAAGCATTATTCAACTGTTTAAGTGATGATGGTACTATTCCCCACAGAGAGCTTGATTTTCCGGAAATCAATCTACCAATGTTTGAATTTCTTTATATGCGGATAATTGGTGCTTGCAATGGCCTCATATGTCTGCTACTAGACTGCGAAACTTCAACTATTATGTTATGGAACCCTTGTACTAGAGACTCCCAGGTATTACCACAACCTCCTATTATTCATAGAGACCTACGGTTCTTCGGATTCGGTTATGATTCCACTACTGATGATTACAAGGTAGTACTGGGTTGTTGGAATTCTAGTTATGAATCTGTTATCGTCTTTACACTCAAAACGGGTTCGTGGAGGAAGCTTCAAAGCCTGACCAAGTATTTTAGGGTGTTATCTATTGGGCGTATAGTTAACGAAGCTCTACATTGGCTACTATATGAACCGTTTGAGCAACCCATGTTCTGTCCTTCAAGAATAGTGTCATTTGATTTAGCGGAGGAGAAATTTCATGAGATTGCATTCCCCTATCCTCCGAATCCGATAGACAGATGTACTCTGGTCGCGGACGTTGAAACTCTCGGTAACTGTTTAACCCTATACTTTCAAACCATGGATTGCAGAGCGGGGTGCGAAATGAAGATATGGGTGATGAAGGAATATGGAGTCAAGGAATCCTGGGCTGAAGTCATAAACATCCCTTCAGGGATTCTAGGTGAACGTTATTCATTCATGAGATGCATTTCTGAGAATGGTGAAGTTTTGATGCGTCTGGGTAGTGTTGGTCCCTTGGCAATATATAATCCCAAGGAAAAGACATTTAGGATTTTGTTGCACCACAATCATGAAGCCTTTTATGATACAGCTACTTATGTAGAAACTTTAGTTTCACCATTCATTGGCAGCTCTATTGGCACAAGCATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

393

Amino Acids

45.24

Weight (kDa)

6.11

Isoelectric Point (pI)

45.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 28 - 62 2.7e-09 F-box domain
F-box-like PF12937 28 - 62 2.3e-07 F-box-like
FBA_3 PF08268 118 - 362 2.4e-21 F-box associated beta propeller domain
FBA_1 PF07734 124 - 321 2.1e-22 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 50
AccB7I CCANNNNNTGG 1 cut(s) 1154
AccBSI CCGCTC 1 cut(s) 881
AccII CGCG 2 cut(s) 11, 821
AccIII TCCGGA 1 cut(s) 328
AciI CCGC 6 cut(s) 154, 199, 367, 752, 821, 881
AclI AACGTT 1 cut(s) 976
AclWI GGATC 1 cut(s) 88
AcsI RAATTY 3 cut(s) 353, 562, 761
AcuI CTGAAG 2 cut(s) 942, 960
AfaI GTAC 5 cut(s) 266, 301, 448, 549, 811
AfiI CCNNNNNNNGG 2 cut(s) 24, 1154
AgsI TTSAA 8 cut(s) 223, 280, 353, 423, 623, 729, 830, 863
AjnI CCWGG 2 cut(s) 459, 932
AluBI AGCT 7 cut(s) 219, 226, 319, 619, 677, 1121, 1161
AluI AGCT 7 cut(s) 219, 226, 319, 619, 677, 1121, 1161
Alw26I GTCTC 2 cut(s) 447, 486
AlwI GGATC 1 cut(s) 88
Ama87I CYCGRG 1 cut(s) 65
Aor13HI TCCGGA 1 cut(s) 328
AoxI GGCC 1 cut(s) 388
ApeKI GCWGC 1 cut(s) 1158
ApoI RAATTY 3 cut(s) 353, 562, 761
AspLEI GCGC 1 cut(s) 13
AspS9I GGNCC 3 cut(s) 56, 255, 1040
AsuHPI GGTGA 4 cut(s) 916, 983, 1022, 1137
AvaI CYCGRG 1 cut(s) 65
AvaII GGWCC 3 cut(s) 56, 255, 1040
BaeGI GKGCMC 1 cut(s) 160
BanI GGYRCC 1 cut(s) 50
BbvI GCAGC 1 cut(s) 1170
BccI CCATC 2 cut(s) 89, 290
BciT130I CCWGG 2 cut(s) 461, 934
BcoDI GTCTC 2 cut(s) 447, 486
BfaI CTAG 4 cut(s) 407, 450, 567, 968
BisI GCNGC 1 cut(s) 1159
BlsI GCNGC 1 cut(s) 1160
BmcAI AGTACT 1 cut(s) 549
Bme1390I CCNGG 2 cut(s) 461, 934
Bme18I GGWCC 3 cut(s) 56, 255, 1040
BmeT110I CYCGRG 1 cut(s) 65
BmgT120I GGNCC 3 cut(s) 56, 255, 1040
BmiI GGNNCC 3 cut(s) 52, 440, 1042
BmrFI CCNGG 2 cut(s) 461, 934
BmrI ACTGGG 2 cut(s) 163, 560
BmsI GCATC 3 cut(s) 67, 983, 1011
BmuI ACTGGG 2 cut(s) 163, 560
BplI GAGNNNNNCTC 2 cut(s) 83, 115
BsaI GGTCTC 1 cut(s) 486
BsaJI CCNNGG 5 cut(s) 459, 867, 933, 1044, 1062
BsaWI WCCGGW 2 cut(s) 53, 328
BsaXI ACNNNNNCTCC 1 cut(s) 29
Bsc4I CCNNNNNNNGG 2 cut(s) 24, 1154
Bse118I RCCGGY 1 cut(s) 24
Bse1I ACTGG 3 cut(s) 42, 169, 555
Bse3DI GCAATG 1 cut(s) 391
BseAI TCCGGA 1 cut(s) 328
BseBI CCWGG 2 cut(s) 461, 934
BseDI CCNNGG 5 cut(s) 459, 867, 933, 1044, 1062
BseGI GGATG 2 cut(s) 195, 951
BseLI CCNNNNNNNGG 2 cut(s) 24, 1154
BseMI GCAATG 1 cut(s) 391
BseMII CTCAG 1 cut(s) 993
BseNI ACTGG 3 cut(s) 42, 169, 555
BseRI GAGGAG 1 cut(s) 770
BseSI GKGCMC 1 cut(s) 160
BseXI GCAGC 1 cut(s) 1170
Bsh1236I CGCG 2 cut(s) 11, 821
BshFI GGCC 1 cut(s) 390
BshNI GGYRCC 1 cut(s) 50
BsiHKCI CYCGRG 1 cut(s) 65
BsiSI CCGG 4 cut(s) 25, 48, 54, 329
BslFI GGGAC 1 cut(s) 1026
BslI CCNNNNNNNGG 2 cut(s) 24, 1154
BsmAI GTCTC 2 cut(s) 447, 486
BsmFI GGGAC 1 cut(s) 1026
BsmI GAATGC 1 cut(s) 776
BsnI GGCC 1 cut(s) 390
Bso31I GGTCTC 1 cut(s) 486
BsoBI CYCGRG 1 cut(s) 65
Bsp1286I GDGCHC 1 cut(s) 160
Bsp13I TCCGGA 1 cut(s) 328
Bsp143I GATC 2 cut(s) 93, 162
Bsp19I CCATGG 1 cut(s) 867
BspACI CCGC 6 cut(s) 154, 199, 367, 752, 821, 881
BspANI GGCC 1 cut(s) 390
BspCNI CTCAG 1 cut(s) 994
BspEI TCCGGA 1 cut(s) 328
BspFNI CGCG 2 cut(s) 11, 821
BspHI TCATGA 3 cut(s) 766, 987, 1099
BspLI GGNNCC 3 cut(s) 52, 440, 1042
BspPI GGATC 1 cut(s) 88
BspT107I GGYRCC 1 cut(s) 50
BspTNI GGTCTC 1 cut(s) 486
BsrBI CCGCTC 1 cut(s) 881
BsrDI GCAATG 1 cut(s) 391
BsrFI RCCGGY 1 cut(s) 24
BsrI ACTGG 3 cut(s) 42, 169, 555
BssAI RCCGGY 1 cut(s) 24
BssECI CCNNGG 5 cut(s) 459, 867, 933, 1044, 1062
BssMI GATC 2 cut(s) 93, 162
BssT1I CCWWGG 3 cut(s) 867, 1044, 1062
Bst2UI CCWGG 2 cut(s) 461, 934
Bst4CI ACNGT 4 cut(s) 284, 501, 702, 845
BstC8I GCNNGC 4 cut(s) 26, 156, 217, 382
BstDEI CTNAG 1 cut(s) 1002
BstDSI CCRYGG 1 cut(s) 867
BstF5I GGATG 2 cut(s) 195, 951
BstFNI CGCG 2 cut(s) 11, 821
BstHHI GCGC 1 cut(s) 13
BstKTI GATC 2 cut(s) 96, 165
BstMAI GTCTC 2 cut(s) 447, 486
BstMBI GATC 2 cut(s) 93, 162
BstMWI GCNNNNNNNGC 3 cut(s) 30, 155, 1167
BstNI CCWGG 2 cut(s) 461, 934
BstNSI RCATGY 1 cut(s) 1180
BstSCI CCNGG 2 cut(s) 459, 932
BstSLI GKGCMC 1 cut(s) 160
BstUI CGCG 2 cut(s) 11, 821
BstV1I GCAGC 1 cut(s) 1170
BstX2I RGATCY 1 cut(s) 93
BstYI RGATCY 1 cut(s) 93
BsuRI GGCC 1 cut(s) 390
BtgI CCRYGG 1 cut(s) 867
BtsCI GGATG 2 cut(s) 195, 951
BtsIMutI CAGTG 1 cut(s) 158
Cac8I GCNNGC 4 cut(s) 26, 156, 217, 382
CciI TCATGA 3 cut(s) 766, 987, 1099
CfoI GCGC 1 cut(s) 13
Cfr10I RCCGGY 1 cut(s) 24
Cfr13I GGNCC 3 cut(s) 56, 255, 1040
CseI GACGC 2 cut(s) 17, 1013
Csp6I GTAC 5 cut(s) 265, 300, 447, 548, 810
CviAII CATG 9 cut(s) 60, 102, 150, 715, 767, 868, 988, 1100, 1177
CviQI GTAC 5 cut(s) 265, 300, 447, 548, 810
DdeI CTNAG 1 cut(s) 1002
DpnI GATC 2 cut(s) 95, 164
DpnII GATC 2 cut(s) 93, 162
Eco130I CCWWGG 3 cut(s) 867, 1044, 1062
Eco31I GGTCTC 1 cut(s) 486
Eco47I GGWCC 3 cut(s) 56, 255, 1040
Eco57I CTGAAG 2 cut(s) 942, 960
Eco88I CYCGRG 1 cut(s) 65
EcoRI GAATTC 1 cut(s) 562
EcoRII CCWGG 2 cut(s) 459, 932
EcoT14I CCWWGG 3 cut(s) 867, 1044, 1062
EcoT22I ATGCAT 1 cut(s) 998
ErhI CCWWGG 3 cut(s) 867, 1044, 1062
FaeI CATG 9 cut(s) 63, 105, 153, 718, 770, 871, 991, 1103, 1180
FaqI GGGAC 1 cut(s) 1026
FatI CATG 9 cut(s) 59, 101, 149, 714, 766, 867, 987, 1099, 1176
FauI CCCGC 2 cut(s) 147, 874
FauNDI CATATG 1 cut(s) 395
Fnu4HI GCNGC 1 cut(s) 1159
FokI GGATG 2 cut(s) 182, 938
Fsp4HI GCNGC 1 cut(s) 1159
FspBI CTAG 4 cut(s) 407, 450, 567, 968
GlaI GCGC 1 cut(s) 12
GluI GCNGC 1 cut(s) 1159
HaeIII GGCC 1 cut(s) 390
HapII CCGG 4 cut(s) 25, 48, 54, 329
HgaI GACGC 2 cut(s) 17, 1013
HhaI GCGC 1 cut(s) 13
Hin1II CATG 9 cut(s) 63, 105, 153, 718, 770, 871, 991, 1103, 1180
Hin6I GCGC 1 cut(s) 11
HinP1I GCGC 1 cut(s) 11
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HindIII AAGCTT 2 cut(s) 224, 617
HinfI GANTC 9 cut(s) 68, 455, 510, 521, 575, 793, 921, 929, 964
HpaI GTTAAC 1 cut(s) 670
HpaII CCGG 4 cut(s) 25, 48, 54, 329
HphI GGTGA 4 cut(s) 916, 983, 1022, 1137
Hpy166II GTNNAC 2 cut(s) 670, 974
Hpy188I TCNGA 5 cut(s) 7, 509, 792, 798, 1003
Hpy188III TCNNGA 7 cut(s) 91, 184, 329, 729, 767, 988, 1100
Hpy8I GTNNAC 2 cut(s) 670, 974
Hpy99I CGWCG 1 cut(s) 11
HpyAV CCTTC 3 cut(s) 735, 904, 966
HpyCH4III ACNGT 4 cut(s) 284, 501, 702, 845
HpyCH4IV ACGT 2 cut(s) 825, 976
HpyCH4V TGCA 6 cut(s) 144, 384, 776, 876, 996, 1090
HpyF10VI GCNNNNNNNGC 3 cut(s) 30, 155, 1167
HpyF3I CTNAG 1 cut(s) 1002
HpySE526I ACGT 2 cut(s) 825, 976
Hsp92II CATG 9 cut(s) 63, 105, 153, 718, 770, 871, 991, 1103, 1180
HspAI GCGC 1 cut(s) 11
Kpn2I TCCGGA 1 cut(s) 328
KroI GCCGGC 1 cut(s) 24
KroNI GCCGGC 1 cut(s) 26
KspAI GTTAAC 1 cut(s) 670
Kzo9I GATC 2 cut(s) 93, 162
Lsp1109I GCAGC 1 cut(s) 1170
LweI GCATC 3 cut(s) 67, 983, 1011
MaeI CTAG 4 cut(s) 407, 450, 567, 968
MaeII ACGT 2 cut(s) 825, 976
MaeIII GTNAC 1 cut(s) 839
MalI GATC 2 cut(s) 95, 164
MbiI CCGCTC 1 cut(s) 881
MboI GATC 2 cut(s) 93, 162
MboII GAAGA 2 cut(s) 496, 907
MflI RGATCY 1 cut(s) 93
MhlI GDGCHC 1 cut(s) 160
MluCI AATT 4 cut(s) 353, 372, 562, 761
MlyI GAGTC 3 cut(s) 77, 449, 930
MmeI TCCRAC 2 cut(s) 30, 539
MnlI CCTC 7 cut(s) 107, 203, 401, 486, 606, 748, 798
Mph1103I ATGCAT 1 cut(s) 998
MroI TCCGGA 1 cut(s) 328
MroNI GCCGGC 1 cut(s) 24
MseI TTAA 3 cut(s) 287, 669, 848
MslI CAYNNNNRTG 2 cut(s) 1098, 1175
MspI CCGG 4 cut(s) 25, 48, 54, 329
MspR9I CCNGG 2 cut(s) 461, 934
Mva1269I GAATGC 1 cut(s) 776
MvaI CCWGG 2 cut(s) 461, 934
MvnI CGCG 2 cut(s) 11, 821
MwoI GCNNNNNNNGC 3 cut(s) 30, 155, 1167
NaeI GCCGGC 1 cut(s) 26
NcoI CCATGG 1 cut(s) 867
NdeI CATATG 1 cut(s) 395
NdeII GATC 2 cut(s) 93, 162
NgoMIV GCCGGC 1 cut(s) 24
NlaIII CATG 9 cut(s) 63, 105, 153, 718, 770, 871, 991, 1103, 1180
NlaIV GGNNCC 3 cut(s) 52, 440, 1042
NsiI ATGCAT 1 cut(s) 998
NspI RCATGY 1 cut(s) 1180
PagI TCATGA 3 cut(s) 766, 987, 1099
PctI GAATGC 1 cut(s) 776
PdiI GCCGGC 1 cut(s) 26
PfeI GAWTC 6 cut(s) 510, 521, 575, 793, 929, 964
PflMI CCANNNNNTGG 1 cut(s) 1154
PkrI GCNGC 1 cut(s) 1160
PleI GAGTC 3 cut(s) 76, 449, 929
PpsI GAGTC 3 cut(s) 76, 449, 929
Psp1406I AACGTT 1 cut(s) 976
Psp6I CCWGG 2 cut(s) 459, 932
PspGI CCWGG 2 cut(s) 459, 932
PspN4I GGNNCC 3 cut(s) 52, 440, 1042
PspPI GGNCC 3 cut(s) 56, 255, 1040
PsuI RGATCY 1 cut(s) 93
RsaI GTAC 5 cut(s) 266, 301, 448, 549, 811
RsaNI GTAC 5 cut(s) 265, 300, 447, 548, 810
RseI CAYNNNNRTG 2 cut(s) 1098, 1175
SaqAI TTAA 3 cut(s) 287, 669, 848
SatI GCNGC 1 cut(s) 1159
Sau3AI GATC 2 cut(s) 93, 162
Sau96I GGNCC 3 cut(s) 56, 255, 1040
ScaI AGTACT 1 cut(s) 549
SchI GAGTC 3 cut(s) 77, 449, 930
ScrFI CCNGG 2 cut(s) 461, 934
SduI GDGCHC 1 cut(s) 160
SfaNI GCATC 3 cut(s) 67, 983, 1011
SinI GGWCC 3 cut(s) 56, 255, 1040
SmiMI CAYNNNNRTG 2 cut(s) 1098, 1175
Sse9I AATT 4 cut(s) 353, 372, 562, 761
SsiI CCGC 6 cut(s) 154, 199, 367, 752, 821, 881
SspMI CTAG 4 cut(s) 407, 450, 567, 968
StyD4I CCNGG 2 cut(s) 459, 932
StyI CCWWGG 3 cut(s) 867, 1044, 1062
TaaI ACNGT 4 cut(s) 284, 501, 702, 845
TaiI ACGT 2 cut(s) 828, 979
TaqI TCGA 2 cut(s) 75, 90
TasI AATT 4 cut(s) 353, 372, 562, 761
TatI WGTACW 3 cut(s) 446, 547, 809
TfiI GAWTC 6 cut(s) 510, 521, 575, 793, 929, 964
Tru1I TTAA 3 cut(s) 287, 669, 848
Tru9I TTAA 3 cut(s) 287, 669, 848
TscAI CASTG 1 cut(s) 165
TseI GCWGC 1 cut(s) 1158
TspGWI ACGGA 1 cut(s) 122
TspRI CASTG 1 cut(s) 165
Van91I CCANNNNNTGG 1 cut(s) 1154
VpaK11BI GGWCC 3 cut(s) 56, 255, 1040
XapI RAATTY 3 cut(s) 353, 562, 761
XceI RCATGY 1 cut(s) 1180
XspI CTAG 4 cut(s) 407, 450, 567, 968
ZrmI AGTACT 1 cut(s) 549
Zsp2I ATGCAT 1 cut(s) 998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.