FvH4_6g40070

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000113
Physical Location & Seq
Reverse (-)
31658859 .. 31662055
3197 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40070.t1

Sequence Viewer

Length: 2052 bp
ATGTCGAACCCTTTGCACACTCGGCATCAGCCGCAATGGGTTCTCTCCGAGTCTCTTGATTTCCTCTCATGGTTACCGGCCAAATCTTTACTTCGATTTCGTTGTATATGCAAAACATGGAAGGCAATGATCTCTGAACCTTATTTCATCAGACAACACCTCAGCCGCATCGACACCAAAAGCAACAGCAGCTACTCCCTCCTTGTTAAGGAGATCTCCATCTGCCGATCCATAGGCTGCGGAGAAATATTCAAGTGTTCGACTCCAAGCACAGAGCTTGATTTCCCGCTACTTGATCCATTGTATGAATTTTACTTCATTGATATCATTGGTTCTTGCAATGGCTTGGTATGTTTGCTACTTGATTTCATAACCACCACTATTATGTTATGGAATCCTTGCACTAGAGAATCCAAGGTGTTACCACAACCTCCTATTGAGAATCTCCCAAAGTTTTTTGGTTTCGGTTATGATTCCACAACTGATGATTACAAGGTGATAGTGGGAAGTTTTCCTCCTACTTCCGGTTATGAATATGTTGTTGTTGCTTTTACTCTAAAATCGGGTTCATGGAGGAAGCTTCATAGCCTCAACCAGAATGTTAGGGTGGTCGGGCATGGCTGTTTTGTAAACGAAACTCTACATTGGGTTCTAACAAGTGAAAGGGATGAGGAAGGTAGGGTGACTGCTTACAAGTTAGTCTCATTCAACTTGGCTGAGGAGAAATTTCATGAGATTGCATCCCCATATTCTATTGACGCACGTAATTTGACAAGAGTTGGAAATTTTAGAAATTCTTTAGCCTTATACTGTCAACCCTTCTCATTCATAGGTAGTTTTTGTTTTAGAATGTGGGTGATGAAGGAATATGGAGTCGAGAAATCCTGGACCGAAGTCATGAAAATCCCTTCAGAGATTCTGCCTAGACATTGTTGTCATTGCTTGAAGCCTTTATGCATTTCTGAAGATGGTGTACTTTTGATAGAAGTGTTTAGTGATTTAGACGATAGTGGCTTTTTGATGTTGTACAATCCGAAAGAAAATACATTTAAGGATAGAATGCTTGATTTTCCGGTAATAATTGATCCTCTAATTGACATCGATGCTATTGCAATCGTTGGTAGTTGCAATGGTTTGGTGATAGACTGGGTTCCAGGATTCAAATCTATACGTTTAAGGGATATCCCAAACAATTTTATAACAACAAATCCCAATGACATTCATTGGAACTTTTGCTTGCAAGCAATTGAAAGAGTTGGTGAAGCTTCTGCTATCATTCTTTATACTTTTGATGCTTTGGAGTCACATGTTTTGGAAGCTTTCTCTTCATCTATGCTTGTTTATGCGATTGGCCCTCTCCAACTACTTCTCAATCAATTACCAGAAGATGACCCTTCCAAGCATATTAGCTACAGTCTATGGAAAGAAGAAACTGAGTGCCTCAAATGGCTAAACTCCAAGGCACCAAACTCGGTTTTGTATGTGAACTTTGGTAGTATAGTAAATTTGACACCTAAACATCTTGTCGAATATGGATGGGGACTAGCGAATTCCCAGCTGCCATTCTTGTGGGTGATAAGGCCTGATTTAGTTGTTGGTGAATCAGCAATTTTTCCACCAGAGTTTGTGGCCAACACTAAAGATAGAGGTCTAGTATCAAGATGGTGTCCACAAGAGGAAGTGCTTAACCACCCATCAGTTGGCGGGTTTTTGACGCACAGCGGCTGGAATTCAACCATAGAGAGCGTGGCGGCAGTGCCAATGCTTTGTTGGCCACTCTTTGGTGACCAGCAAACAAGTTGTTATTATAATTGTAATGAACGGGGTATTGGGATGGAGATGAGTAGTGATGTGAAGAGAGATGAAGTAGAGAGGCTTGTTAAAGAGTTCATGGAGGGAGAGAAGGGTGAGAAAATGAGACATACGGCCATGGAGTGGAAGAAACATGCTGAAGAAGCAACTGCTCCAAATGGTTCTTCGTCCAAAAACTTGGATGATTTAGTGAATCAAGTTCTACTGTACGAAACTGCTCTATGCTACATTGCTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

684

Amino Acids

77.71

Weight (kDa)

5.29

Isoelectric Point (pI)

39.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 105 - 308 1.2e-21 F-box associated beta propeller domain
FBA_3 PF08268 107 - 352 2.5e-21 F-box associated beta propeller domain
UDPGT PF00201 480 - 635 3.5e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1199, 1809
AasI GACNNNNNNGTC 1 cut(s) 933
AccB1I GGYRCC 1 cut(s) 1462
AccB7I CCANNNNNTGG 3 cut(s) 1700, 1781, 1935
AciI CCGC 7 cut(s) 32, 166, 240, 287, 1704, 1722, 1751
AclWI GGATC 3 cut(s) 222, 290, 1079
AcoI YGGCCR 4 cut(s) 78, 1629, 1772, 1926
AcsI RAATTY 7 cut(s) 308, 725, 784, 793, 1504, 1549, 1729
AcuI CTGAAG 3 cut(s) 894, 984, 1971
AfaI GTAC 3 cut(s) 975, 1028, 2021
AfiI CCNNNNNNNGG 5 cut(s) 208, 524, 1700, 1781, 1935
AflIII ACRYGT 1 cut(s) 1306
AgsI TTSAA 6 cut(s) 253, 709, 946, 1162, 1250, 1734
AjnI CCWGG 2 cut(s) 884, 1153
AjuI GAANNNNNNNTTGG 4 cut(s) 1812, 1844, 1960, 1992
AluBI AGCT 7 cut(s) 192, 277, 580, 1265, 1319, 1410, 1558
AluI AGCT 7 cut(s) 192, 277, 580, 1265, 1319, 1410, 1558
Alw26I GTCTC 3 cut(s) 57, 706, 1912
AlwI GGATC 3 cut(s) 222, 290, 1079
AlwNI CAGNNNCTG 1 cut(s) 1725
AoxI GGCC 6 cut(s) 78, 1351, 1580, 1629, 1772, 1926
ApeKI GCWGC 3 cut(s) 189, 237, 1558
ApoI RAATTY 7 cut(s) 308, 725, 784, 793, 1504, 1549, 1729
AspS9I GGNCC 2 cut(s) 888, 1352
AsuHPI GGTGA 9 cut(s) 508, 694, 868, 1150, 1271, 1585, 1610, 1796, 1919
AvaII GGWCC 1 cut(s) 888
BalI TGGCCA 2 cut(s) 1631, 1774
BanI GGYRCC 1 cut(s) 1462
BarI GAAGNNNNNNTAC 2 cut(s) 957, 989
BbvCI CCTCAGC 2 cut(s) 161, 717
BbvI GCAGC 3 cut(s) 201, 224, 1545
BccI CCATC 6 cut(s) 227, 962, 1530, 1656, 1702, 1828
BceAI ACGGC 1 cut(s) 1941
BcgI CGANNNNNNTGC 5 cut(s) 29, 1091, 1125, 1452, 1486
BciT130I CCWGG 2 cut(s) 886, 1155
BcoDI GTCTC 3 cut(s) 57, 706, 1912
BfaI CTAG 4 cut(s) 405, 924, 1544, 1652
BfmI CTRYAG 1 cut(s) 1411
BglII AGATCT 1 cut(s) 213
BisI GCNGC 7 cut(s) 32, 166, 190, 238, 1559, 1723, 1752
BlsI GCNGC 7 cut(s) 33, 167, 191, 239, 1560, 1724, 1753
Bme1390I CCNGG 2 cut(s) 886, 1155
Bme18I GGWCC 1 cut(s) 888
BmgT120I GGNCC 2 cut(s) 888, 1352
BmiI GGNNCC 2 cut(s) 1152, 1464
BmrFI CCNGG 2 cut(s) 886, 1155
BmrI ACTGGG 1 cut(s) 1156
BmsI GCATC 5 cut(s) 34, 177, 749, 1093, 1282
BmuI ACTGGG 1 cut(s) 1156
BoxI GACNNNNGTC 1 cut(s) 893
Bpu10I CCTNAGC 2 cut(s) 161, 717
Bsa29I ATCGAT 1 cut(s) 1101
BsaAI YACGTR 1 cut(s) 764
BsaBI GATNNNNATC 2 cut(s) 218, 1162
BsaJI CCNNGG 3 cut(s) 414, 1458, 1929
BsaWI WCCGGW 2 cut(s) 524, 1072
Bsc4I CCNNNNNNNGG 5 cut(s) 208, 524, 1700, 1781, 1935
Bse118I RCCGGY 1 cut(s) 76
Bse1I ACTGG 1 cut(s) 1151
Bse3DI GCAATG 6 cut(s) 41, 132, 346, 937, 1135, 2040
Bse8I GATNNNNATC 2 cut(s) 218, 1162
BseBI CCWGG 2 cut(s) 886, 1155
BseCI ATCGAT 1 cut(s) 1101
BseDI CCNNGG 3 cut(s) 414, 1458, 1929
BseGI GGATG 5 cut(s) 673, 740, 1541, 1839, 1999
BseJI GATNNNNATC 2 cut(s) 218, 1162
BseLI CCNNNNNNNGG 5 cut(s) 208, 524, 1700, 1781, 1935
BseMI GCAATG 6 cut(s) 41, 132, 346, 937, 1135, 2040
BseMII CTCAG 3 cut(s) 175, 708, 1425
BseNI ACTGG 1 cut(s) 1151
BseRI GAGGAG 1 cut(s) 734
BseXI GCAGC 3 cut(s) 201, 224, 1545
BseYI CCCAGC 1 cut(s) 1554
BshFI GGCC 6 cut(s) 80, 1353, 1582, 1631, 1774, 1928
BshNI GGYRCC 1 cut(s) 1462
BshVI ATCGAT 1 cut(s) 1101
BsiSI CCGG 3 cut(s) 77, 525, 1073
BslFI GGGAC 1 cut(s) 1554
BslI CCNNNNNNNGG 5 cut(s) 208, 524, 1700, 1781, 1935
BsmAI GTCTC 3 cut(s) 57, 706, 1912
BsmFI GGGAC 1 cut(s) 1554
BsmI GAATGC 1 cut(s) 1065
BsnI GGCC 6 cut(s) 80, 1353, 1582, 1631, 1774, 1928
Bsp1407I TGTACA 1 cut(s) 1026
Bsp143I GATC 5 cut(s) 129, 213, 227, 295, 1084
Bsp19I CCATGG 1 cut(s) 1929
BspACI CCGC 7 cut(s) 32, 166, 240, 287, 1704, 1722, 1751
BspANI GGCC 6 cut(s) 80, 1353, 1582, 1631, 1774, 1928
BspCNI CTCAG 3 cut(s) 174, 709, 1426
BspDI ATCGAT 1 cut(s) 1101
BspHI TCATGA 2 cut(s) 730, 897
BspLI GGNNCC 2 cut(s) 1152, 1464
BspPI GGATC 3 cut(s) 222, 290, 1079
BspT107I GGYRCC 1 cut(s) 1462
BsrDI GCAATG 6 cut(s) 41, 132, 346, 937, 1135, 2040
BsrFI RCCGGY 1 cut(s) 76
BsrGI TGTACA 1 cut(s) 1026
BsrI ACTGG 1 cut(s) 1151
BssAI RCCGGY 1 cut(s) 76
BssECI CCNNGG 3 cut(s) 414, 1458, 1929
BssMI GATC 5 cut(s) 129, 213, 227, 295, 1084
BssT1I CCWWGG 3 cut(s) 414, 1458, 1929
Bst2UI CCWGG 2 cut(s) 886, 1155
Bst4CI ACNGT 3 cut(s) 812, 1415, 2019
Bst6I CTCTTC 2 cut(s) 1330, 1850
BstAUI TGTACA 1 cut(s) 1026
BstBAI YACGTR 1 cut(s) 764
BstC8I GCNNGC 2 cut(s) 1238, 1242
BstDEI CTNAG 3 cut(s) 161, 717, 1434
BstDSI CCRYGG 1 cut(s) 1929
BstEII GGTNACC 2 cut(s) 72, 1784
BstENI CCTNNNNNAGG 1 cut(s) 206
BstF5I GGATG 5 cut(s) 673, 740, 1541, 1839, 1999
BstKTI GATC 5 cut(s) 132, 216, 230, 298, 1087
BstMAI GTCTC 3 cut(s) 57, 706, 1912
BstMBI GATC 5 cut(s) 129, 213, 227, 295, 1084
BstMWI GCNNNNNNNGC 5 cut(s) 22, 31, 189, 1771, 1955
BstNI CCWGG 2 cut(s) 886, 1155
BstNSI RCATGY 2 cut(s) 1310, 1949
BstPAI GACNNNNGTC 1 cut(s) 893
BstPI GGTNACC 2 cut(s) 72, 1784
BstSCI CCNGG 2 cut(s) 884, 1153
BstSFI CTRYAG 1 cut(s) 1411
BstV1I GCAGC 3 cut(s) 201, 224, 1545
BstX2I RGATCY 1 cut(s) 213
BstXI CCANNNNNNTGG 2 cut(s) 1569, 1990
BstYI RGATCY 1 cut(s) 213
Bsu15I ATCGAT 1 cut(s) 1101
BsuRI GGCC 6 cut(s) 80, 1353, 1582, 1631, 1774, 1928
BsuTUI ATCGAT 1 cut(s) 1101
BtgI CCRYGG 1 cut(s) 1929
BtsCI GGATG 5 cut(s) 673, 740, 1541, 1839, 1999
BtsI GCAGTG 1 cut(s) 1761
BtsIMutI CAGTG 1 cut(s) 1761
Cac8I GCNNGC 2 cut(s) 1238, 1242
CaiI CAGNNNCTG 1 cut(s) 1725
CciI TCATGA 2 cut(s) 730, 897
Cfr10I RCCGGY 1 cut(s) 76
Cfr13I GGNCC 2 cut(s) 888, 1352
ClaI ATCGAT 1 cut(s) 1101
CseI GACGC 2 cut(s) 767, 1723
Csp6I GTAC 3 cut(s) 974, 1027, 2020
CviQI GTAC 3 cut(s) 974, 1027, 2020
DdeI CTNAG 3 cut(s) 161, 717, 1434
DpnI GATC 5 cut(s) 131, 215, 229, 297, 1086
DpnII GATC 5 cut(s) 129, 213, 227, 295, 1084
DrdI GACNNNNNNGTC 1 cut(s) 933
DseDI GACNNNNNNGTC 1 cut(s) 933
EaeI YGGCCR 4 cut(s) 78, 1629, 1772, 1926
Eam1104I CTCTTC 2 cut(s) 1330, 1850
EarI CTCTTC 2 cut(s) 1330, 1850
Eco130I CCWWGG 3 cut(s) 414, 1458, 1929
Eco147I AGGCCT 1 cut(s) 1582
Eco32I GATATC 2 cut(s) 325, 1183
Eco47I GGWCC 1 cut(s) 888
Eco57I CTGAAG 3 cut(s) 894, 984, 1971
Eco91I GGTNACC 2 cut(s) 72, 1784
EcoNI CCTNNNNNAGG 1 cut(s) 206
EcoO65I GGTNACC 2 cut(s) 72, 1784
EcoRI GAATTC 2 cut(s) 1549, 1729
EcoRII CCWGG 2 cut(s) 884, 1153
EcoRV GATATC 2 cut(s) 325, 1183
EcoT14I CCWWGG 3 cut(s) 414, 1458, 1929
EcoT22I ATGCAT 1 cut(s) 959
ErhI CCWWGG 3 cut(s) 414, 1458, 1929
FaqI GGGAC 1 cut(s) 1554
FauI CCCGC 2 cut(s) 294, 1697
Fnu4HI GCNGC 7 cut(s) 32, 166, 190, 238, 1559, 1723, 1752
FokI GGATG 5 cut(s) 680, 727, 1548, 1846, 2006
Fsp4HI GCNGC 7 cut(s) 32, 166, 190, 238, 1559, 1723, 1752
FspBI CTAG 4 cut(s) 405, 924, 1544, 1652
GluI GCNGC 7 cut(s) 32, 166, 190, 238, 1559, 1723, 1752
GsaI CCCAGC 1 cut(s) 1558
HaeIII GGCC 6 cut(s) 80, 1353, 1582, 1631, 1774, 1928
HapII CCGG 3 cut(s) 77, 525, 1073
HgaI GACGC 2 cut(s) 767, 1723
HincII GTYRAC 1 cut(s) 815
HindII GTYRAC 1 cut(s) 815
HindIII AAGCTT 3 cut(s) 578, 1263, 1317
HpaII CCGG 3 cut(s) 77, 525, 1073
HphI GGTGA 9 cut(s) 508, 694, 868, 1150, 1271, 1585, 1610, 1796, 1919
Hpy166II GTNNAC 5 cut(s) 631, 815, 974, 1486, 1670
Hpy188I TCNGA 6 cut(s) 49, 136, 152, 913, 964, 1035
Hpy188III TCNNGA 5 cut(s) 56, 731, 877, 898, 1659
Hpy8I GTNNAC 5 cut(s) 631, 815, 974, 1486, 1670
HpyAV CCTTC 7 cut(s) 115, 668, 829, 856, 918, 1404, 1897
HpyCH4III ACNGT 3 cut(s) 812, 1415, 2019
HpyCH4IV ACGT 2 cut(s) 763, 1171
HpyCH4V TGCA 9 cut(s) 16, 111, 339, 402, 740, 957, 1112, 1128, 1240
HpyF10VI GCNNNNNNNGC 5 cut(s) 22, 31, 189, 1771, 1955
HpyF3I CTNAG 3 cut(s) 161, 717, 1434
HpySE526I ACGT 2 cut(s) 763, 1171
Kzo9I GATC 5 cut(s) 129, 213, 227, 295, 1084
LmnI GCTCC 1 cut(s) 1969
Lsp1109I GCAGC 3 cut(s) 201, 224, 1545
LweI GCATC 5 cut(s) 34, 177, 749, 1093, 1282
MaeI CTAG 4 cut(s) 405, 924, 1544, 1652
MaeII ACGT 2 cut(s) 763, 1171
MaeIII GTNAC 5 cut(s) 72, 420, 682, 1302, 1784
MalI GATC 5 cut(s) 131, 215, 229, 297, 1086
MboI GATC 5 cut(s) 129, 213, 227, 295, 1084
MboII GAAGA 8 cut(s) 977, 1317, 1397, 1439, 1867, 1951, 1964, 1968
MfeI CAATTG 1 cut(s) 1245
MflI RGATCY 1 cut(s) 213
MlsI TGGCCA 2 cut(s) 1631, 1774
MluNI TGGCCA 2 cut(s) 1631, 1774
MlyI GAGTC 4 cut(s) 59, 256, 882, 1310
MmeI TCCRAC 2 cut(s) 760, 1384
Mox20I TGGCCA 2 cut(s) 1631, 1774
Mph1103I ATGCAT 1 cut(s) 959
MscI TGGCCA 2 cut(s) 1631, 1774
MseI TTAA 6 cut(s) 207, 1050, 1175, 1686, 1881, 2050
MslI CAYNNNNRTG 2 cut(s) 383, 1567
Msp20I TGGCCA 2 cut(s) 1631, 1774
MspA1I CMGCKG 2 cut(s) 1558, 1722
MspI CCGG 3 cut(s) 77, 525, 1073
MspR9I CCNGG 2 cut(s) 886, 1155
MunI CAATTG 1 cut(s) 1245
Mva1269I GAATGC 1 cut(s) 1065
MvaI CCWGG 2 cut(s) 886, 1155
MwoI GCNNNNNNNGC 5 cut(s) 22, 31, 189, 1771, 1955
NcoI CCATGG 1 cut(s) 1929
NdeII GATC 5 cut(s) 129, 213, 227, 295, 1084
NlaIV GGNNCC 2 cut(s) 1152, 1464
NmuCI GTSAC 3 cut(s) 682, 1302, 1784
NsiI ATGCAT 1 cut(s) 959
NspI RCATGY 2 cut(s) 1310, 1949
PagI TCATGA 2 cut(s) 730, 897
PceI AGGCCT 1 cut(s) 1582
PciI ACATGT 1 cut(s) 1306
PctI GAATGC 1 cut(s) 1065
PfeI GAWTC 8 cut(s) 394, 410, 442, 473, 916, 1158, 1601, 2005
PflMI CCANNNNNTGG 3 cut(s) 1700, 1781, 1935
PfoI TCCNGGA 2 cut(s) 884, 1153
PkrI GCNGC 7 cut(s) 33, 167, 191, 239, 1560, 1724, 1753
PleI GAGTC 4 cut(s) 58, 256, 881, 1309
PpsI GAGTC 4 cut(s) 58, 256, 881, 1309
Ppu21I YACGTR 1 cut(s) 764
PscI ACATGT 1 cut(s) 1306
PshAI GACNNNNGTC 1 cut(s) 893
PsiI TTATAA 2 cut(s) 1199, 1809
Psp6I CCWGG 2 cut(s) 884, 1153
PspEI GGTNACC 2 cut(s) 72, 1784
PspFI CCCAGC 1 cut(s) 1554
PspGI CCWGG 2 cut(s) 884, 1153
PspN4I GGNNCC 2 cut(s) 1152, 1464
PspPI GGNCC 2 cut(s) 888, 1352
PstNI CAGNNNCTG 1 cut(s) 1725
PsuI RGATCY 1 cut(s) 213
PvuII CAGCTG 1 cut(s) 1558
RsaI GTAC 3 cut(s) 975, 1028, 2021
RsaNI GTAC 3 cut(s) 974, 1027, 2020
RseI CAYNNNNRTG 2 cut(s) 383, 1567
SaqAI TTAA 6 cut(s) 207, 1050, 1175, 1686, 1881, 2050
SatI GCNGC 7 cut(s) 32, 166, 190, 238, 1559, 1723, 1752
Sau3AI GATC 5 cut(s) 129, 213, 227, 295, 1084
Sau96I GGNCC 2 cut(s) 888, 1352
SchI GAGTC 4 cut(s) 59, 256, 882, 1310
ScrFI CCNGG 2 cut(s) 886, 1155
SfaNI GCATC 5 cut(s) 34, 177, 749, 1093, 1282
SfcI CTRYAG 1 cut(s) 1411
SinI GGWCC 1 cut(s) 888
SmiMI CAYNNNNRTG 2 cut(s) 383, 1567
SseBI AGGCCT 1 cut(s) 1582
SsiI CCGC 7 cut(s) 32, 166, 240, 287, 1704, 1722, 1751
SspI AATATT 1 cut(s) 249
SspMI CTAG 4 cut(s) 405, 924, 1544, 1652
StuI AGGCCT 1 cut(s) 1582
StyD4I CCNGG 2 cut(s) 884, 1153
StyI CCWWGG 3 cut(s) 414, 1458, 1929
TaaI ACNGT 3 cut(s) 812, 1415, 2019
TaiI ACGT 2 cut(s) 766, 1174
TaqI TCGA 7 cut(s) 5, 94, 171, 260, 876, 1101, 1527
TaqII GACCGA 1 cut(s) 905
TatI WGTACW 2 cut(s) 973, 1026
TauI GCSGC 4 cut(s) 34, 168, 1725, 1754
TfiI GAWTC 8 cut(s) 394, 410, 442, 473, 916, 1158, 1601, 2005
Tru1I TTAA 6 cut(s) 207, 1050, 1175, 1686, 1881, 2050
Tru9I TTAA 6 cut(s) 207, 1050, 1175, 1686, 1881, 2050
TscAI CASTG 1 cut(s) 1761
TseFI GTSAC 3 cut(s) 682, 1302, 1784
TseI GCWGC 3 cut(s) 189, 237, 1558
Tsp45I GTSAC 3 cut(s) 682, 1302, 1784
TspRI CASTG 1 cut(s) 1761
Van91I CCANNNNNTGG 3 cut(s) 1700, 1781, 1935
VpaK11BI GGWCC 1 cut(s) 888
XagI CCTNNNNNAGG 1 cut(s) 206
XapI RAATTY 7 cut(s) 308, 725, 784, 793, 1504, 1549, 1729
XceI RCATGY 2 cut(s) 1310, 1949
XcmI CCANNNNNNNNNTGG 3 cut(s) 1697, 1744, 1767
XspI CTAG 4 cut(s) 405, 924, 1544, 1652
Zsp2I ATGCAT 1 cut(s) 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.