FvH4_3g40660

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000113
Physical Location & Seq
Reverse (-)
34253768 .. 34254979
1212 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g40660.t1

Sequence Viewer

Length: 1212 bp
ATGTCGGACGTTCTCTCCACTCGGCTGCAACAACGACTGGTTCTCTCCGGCACCGGACCCAGCTCCGAGTCTCCTGTTCTTGATTTGGACGCCGTCATCTTCGACATCCTCTCACGGCTGCCGCCCAAATCTCTGCTCCGGTTCCGTTGTGTATGCAAAGCATGGCGGACCCTGATCTCCGATCCTTATTTCATCAAAGAACACCTCAGCCGCGTCAACAACAGCTGCTCCTACTCTGTTTTTGTTAAGGATGTCTCCACTTTCCGGTCCATAGACTCCGAAGCATTATTCAGGGATGATGATGGTCCTGTTCCCAGCAGAGAGCTCTATTTTCCGGTAATTAATGGTCTGAAATTTGATGAGATTCATATCGTTGGTAGTTGCAATGGCTTGATATGTCTACGATTTAAATGGTGTCTTCCGGTTATTATGTTATGGAATCCTTGCACTAGAGAATCCAAAGTCTTACCAAAACTTCATACGAAGGACCTCTTCCCCTCCTCCCCAGACTATTATGGATTCGGTTATGATTCCGCAACTGATGATTACAAGGTAATAGTCGGTGATTTCCGTTACCTAGCGAGTTATAAAAATTGTATACTTGTTTATACAGTAAAAACGGGTTCATGGAGGAAGCTTCAGTACCATGGTTTAGCGCTGCTTGGGTATGGCTGTTTAGTAAACGGTGCTCTACATTGGGTACAAGAAGAGCCATGGGAGGCTGAGGTGGATTCTTACAAGTTAGTGTCATTTGACTTAACCGAGGAGAAATTTCATGAGATTCCATCCCCATATTATCCTAATAATCCTATTGACAGAAGGAATCATTTAGTTGCAAGTGCAGGAAAATTTAGAAATTCTTTAGCCTTATACTCAAGGGGACCTGGGTCAGAATATATGATGTGGGTGATGAAGGAAGCTGGAGTCGAGAAGTCCTGGAATGAAGTCATCAAAATCCCAAAAGAGGTTCTGCATGTATCTGGAGATCATCATCGACATCATATAATCTGGACACCTTTATGCATTTCTAATGACGGTGTAACTTTGATCGTAGTGTGTGCTATACCTCATCATACAGGTAGCTTCTTGAGATTCTTGACATTTTACTATCCAAAGGAAAACCGATGTAGGAATCTTACCGAGCATTGTGTGTCTGAAGCAGTTACTTATGTAGAAACTTTAGTTTCCCCATTCGCACGCACTGGCATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

404

Amino Acids

46.11

Weight (kDa)

7.21

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 32 - 65 2e-10 F-box domain
F-box-like PF12937 32 - 64 4.3e-09 F-box-like
FBA_1 PF07734 119 - 395 2.7e-22 F-box associated beta propeller domain
FBA_3 PF08268 122 - 379 5.6e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 588
AccB1I GGYRCC 1 cut(s) 50
AccI GTMKAC 2 cut(s) 400, 598
AccII CGCG 1 cut(s) 213
AciI CCGC 4 cut(s) 122, 166, 211, 534
AclWI GGATC 1 cut(s) 176
AcsI RAATTY 4 cut(s) 353, 770, 848, 856
AcuI CTGAAG 2 cut(s) 623, 1176
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 2 cut(s) 644, 702
AfeI AGCGCT 1 cut(s) 657
AfiI CCNNNNNNNGG 2 cut(s) 264, 964
AjnI CCWGG 2 cut(s) 883, 935
AluBI AGCT 6 cut(s) 63, 225, 325, 637, 920, 1083
AluI AGCT 6 cut(s) 63, 225, 325, 637, 920, 1083
Alw21I GWGCWC 2 cut(s) 327, 691
Alw26I GTCTC 2 cut(s) 75, 259
AlwI GGATC 1 cut(s) 176
Aor51HI AGCGCT 1 cut(s) 657
ApeKI GCWGC 4 cut(s) 25, 118, 225, 658
ApoI RAATTY 4 cut(s) 353, 770, 848, 856
AseI ATTAAT 1 cut(s) 342
AspLEI GCGC 1 cut(s) 658
AspS9I GGNCC 6 cut(s) 56, 168, 267, 305, 487, 881
AsuHPI GGTGA 2 cut(s) 575, 919
AvaII GGWCC 6 cut(s) 56, 168, 267, 305, 487, 881
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 1 cut(s) 327
BarI GAAGNNNNNNTAC 2 cut(s) 626, 658
BbsI GAAGAC 1 cut(s) 410
Bbv12I GWGCWC 2 cut(s) 327, 691
BbvCI CCTCAGC 2 cut(s) 206, 723
BbvI GCAGC 4 cut(s) 12, 105, 212, 645
BccI CCATC 2 cut(s) 296, 793
BceAI ACGGC 2 cut(s) 77, 131
BciT130I CCWGG 2 cut(s) 885, 937
BcoDI GTCTC 2 cut(s) 75, 259
BfaI CTAG 2 cut(s) 450, 578
BfoI RGCGCY 1 cut(s) 659
BisI GCNGC 6 cut(s) 26, 119, 122, 211, 226, 659
BlsI GCNGC 6 cut(s) 27, 120, 123, 212, 227, 660
Bme1390I CCNGG 2 cut(s) 885, 937
Bme18I GGWCC 6 cut(s) 56, 168, 267, 305, 487, 881
BmgT120I GGNCC 6 cut(s) 56, 168, 267, 305, 487, 881
BmiI GGNNCC 5 cut(s) 52, 58, 143, 170, 882
BmrFI CCNGG 2 cut(s) 885, 937
BoxI GACNNNNGTC 1 cut(s) 886
BpiI GAAGAC 1 cut(s) 410
BpmI CTGGAG 2 cut(s) 942, 1002
Bpu10I CCTNAGC 2 cut(s) 206, 723
BpuEI CTTGAG 2 cut(s) 859, 1108
BsaBI GATNNNNATC 2 cut(s) 368, 990
BsaHI GRCGYC 1 cut(s) 90
BsaJI CCNNGG 4 cut(s) 646, 713, 762, 884
BsaWI WCCGGW 5 cut(s) 53, 138, 264, 334, 421
BsaXI ACNNNNNCTCC 3 cut(s) 29, 212, 242
Bsc4I CCNNNNNNNGG 2 cut(s) 264, 964
Bse1I ACTGG 2 cut(s) 42, 1207
Bse3DI GCAATG 1 cut(s) 391
Bse8I GATNNNNATC 2 cut(s) 368, 990
BseBI CCWGG 2 cut(s) 885, 937
BseDI CCNNGG 4 cut(s) 646, 713, 762, 884
BseGI GGATG 4 cut(s) 105, 256, 301, 785
BseJI GATNNNNATC 2 cut(s) 368, 990
BseLI CCNNNNNNNGG 2 cut(s) 264, 964
BseMI GCAATG 1 cut(s) 391
BseMII CTCAG 2 cut(s) 220, 714
BseNI ACTGG 2 cut(s) 42, 1207
BseRI GAGGAG 2 cut(s) 490, 779
BseXI GCAGC 4 cut(s) 12, 105, 212, 645
BseYI CCCAGC 2 cut(s) 59, 314
BsgI GTGCAG 1 cut(s) 861
Bsh1236I CGCG 1 cut(s) 213
BshNI GGYRCC 1 cut(s) 50
BsiHKAI GWGCWC 2 cut(s) 327, 691
BsiSI CCGG 6 cut(s) 48, 54, 139, 265, 335, 422
BslFI GGGAC 1 cut(s) 894
BslI CCNNNNNNNGG 2 cut(s) 264, 964
BsmAI GTCTC 2 cut(s) 75, 259
BsmFI GGGAC 1 cut(s) 894
Bsp1286I GDGCHC 2 cut(s) 327, 691
Bsp143I GATC 4 cut(s) 174, 181, 985, 1047
Bsp19I CCATGG 2 cut(s) 646, 713
BspACI CCGC 4 cut(s) 122, 166, 211, 534
BspCNI CTCAG 2 cut(s) 219, 715
BspFNI CGCG 1 cut(s) 213
BspHI TCATGA 1 cut(s) 775
BspLI GGNNCC 5 cut(s) 52, 58, 143, 170, 882
BspPI GGATC 1 cut(s) 176
BspQI GCTCTTC 1 cut(s) 702
BspT107I GGYRCC 1 cut(s) 50
BsrDI GCAATG 1 cut(s) 391
BsrI ACTGG 2 cut(s) 42, 1207
BssECI CCNNGG 4 cut(s) 646, 713, 762, 884
BssMI GATC 4 cut(s) 174, 181, 985, 1047
BssNAI GTATAC 1 cut(s) 599
BssNI GRCGYC 1 cut(s) 90
BssT1I CCWWGG 2 cut(s) 646, 713
Bst1107I GTATAC 1 cut(s) 599
Bst2UI CCWGG 2 cut(s) 885, 937
Bst4CI ACNGT 3 cut(s) 613, 686, 1037
Bst6I CTCTTC 2 cut(s) 497, 702
BstACI GRCGYC 1 cut(s) 90
BstC8I GCNNGC 1 cut(s) 1198
BstDEI CTNAG 2 cut(s) 206, 723
BstDSI CCRYGG 2 cut(s) 646, 713
BstF5I GGATG 4 cut(s) 105, 256, 301, 785
BstFNI CGCG 1 cut(s) 213
BstH2I RGCGCY 1 cut(s) 659
BstHHI GCGC 1 cut(s) 658
BstKTI GATC 4 cut(s) 177, 184, 988, 1050
BstMAI GTCTC 2 cut(s) 75, 259
BstMBI GATC 4 cut(s) 174, 181, 985, 1047
BstNI CCWGG 2 cut(s) 885, 937
BstNSI RCATGY 2 cut(s) 977, 1210
BstPAI GACNNNNGTC 1 cut(s) 886
BstSCI CCNGG 2 cut(s) 883, 935
BstUI CGCG 1 cut(s) 213
BstV1I GCAGC 4 cut(s) 12, 105, 212, 645
BstV2I GAAGAC 1 cut(s) 410
BstZ17I GTATAC 1 cut(s) 599
BtgI CCRYGG 2 cut(s) 646, 713
BtsCI GGATG 4 cut(s) 105, 256, 301, 785
BtsIMutI CAGTG 1 cut(s) 1200
Cac8I GCNNGC 1 cut(s) 1198
CciI TCATGA 1 cut(s) 775
CfoI GCGC 1 cut(s) 658
Cfr13I GGNCC 6 cut(s) 56, 168, 267, 305, 487, 881
CseI GACGC 2 cut(s) 98, 202
Csp6I GTAC 2 cut(s) 643, 701
CviAII CATG 7 cut(s) 162, 627, 647, 714, 776, 974, 1207
CviQI GTAC 2 cut(s) 643, 701
DdeI CTNAG 2 cut(s) 206, 723
DpnI GATC 4 cut(s) 176, 183, 987, 1049
DpnII GATC 4 cut(s) 174, 181, 985, 1047
DraI TTTAAA 1 cut(s) 409
Eam1104I CTCTTC 2 cut(s) 497, 702
EarI CTCTTC 2 cut(s) 497, 702
EciI GGCGGA 1 cut(s) 181
Ecl136II GAGCTC 1 cut(s) 325
Eco130I CCWWGG 2 cut(s) 646, 713
Eco24I GRGCYC 1 cut(s) 327
Eco47I GGWCC 6 cut(s) 56, 168, 267, 305, 487, 881
Eco47III AGCGCT 1 cut(s) 657
Eco53kI GAGCTC 1 cut(s) 325
Eco57I CTGAAG 2 cut(s) 623, 1176
EcoICRI GAGCTC 1 cut(s) 325
EcoO109I RGGNCCY 2 cut(s) 487, 881
EcoRII CCWGG 2 cut(s) 883, 935
EcoT14I CCWWGG 2 cut(s) 646, 713
EcoT22I ATGCAT 1 cut(s) 1025
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 2 cut(s) 646, 713
FaeI CATG 7 cut(s) 165, 630, 650, 717, 779, 977, 1210
FalI AAGNNNNNCTT 2 cut(s) 476, 508
FaqI GGGAC 1 cut(s) 894
FatI CATG 7 cut(s) 161, 626, 646, 713, 775, 973, 1206
FblI GTMKAC 2 cut(s) 400, 598
Fnu4HI GCNGC 6 cut(s) 26, 119, 122, 211, 226, 659
FokI GGATG 4 cut(s) 92, 263, 308, 772
FriOI GRGCYC 1 cut(s) 327
Fsp4HI GCNGC 6 cut(s) 26, 119, 122, 211, 226, 659
FspBI CTAG 2 cut(s) 450, 578
GlaI GCGC 1 cut(s) 657
GluI GCNGC 6 cut(s) 26, 119, 122, 211, 226, 659
GsaI CCCAGC 2 cut(s) 63, 318
GsuI CTGGAG 2 cut(s) 942, 1002
HaeII RGCGCY 1 cut(s) 659
HapII CCGG 6 cut(s) 48, 54, 139, 265, 335, 422
HgaI GACGC 2 cut(s) 98, 202
HhaI GCGC 1 cut(s) 658
Hin1I GRCGYC 1 cut(s) 90
Hin1II CATG 7 cut(s) 165, 630, 650, 717, 779, 977, 1210
Hin6I GCGC 1 cut(s) 656
HinP1I GCGC 1 cut(s) 656
HincII GTYRAC 1 cut(s) 217
HindII GTYRAC 1 cut(s) 217
HindIII AAGCTT 1 cut(s) 635
HpaII CCGG 6 cut(s) 48, 54, 139, 265, 335, 422
HphI GGTGA 2 cut(s) 575, 919
Hpy166II GTNNAC 4 cut(s) 217, 401, 599, 682
Hpy188I TCNGA 7 cut(s) 7, 67, 181, 280, 351, 892, 1156
Hpy188III TCNNGA 7 cut(s) 80, 776, 928, 981, 1009, 1087, 1096
Hpy8I GTNNAC 4 cut(s) 217, 401, 599, 682
HpyAV CCTTC 3 cut(s) 478, 813, 907
HpyCH4III ACNGT 3 cut(s) 613, 686, 1037
HpyCH4IV ACGT 1 cut(s) 9
HpyCH4V TGCA 8 cut(s) 28, 156, 384, 447, 836, 842, 973, 1023
HpyF3I CTNAG 2 cut(s) 206, 723
HpySE526I ACGT 1 cut(s) 9
Hsp92I GRCGYC 1 cut(s) 90
Hsp92II CATG 7 cut(s) 165, 630, 650, 717, 779, 977, 1210
HspAI GCGC 1 cut(s) 656
Kzo9I GATC 4 cut(s) 174, 181, 985, 1047
LguI GCTCTTC 1 cut(s) 702
LmnI GCTCC 3 cut(s) 68, 141, 233
Lsp1109I GCAGC 4 cut(s) 12, 105, 212, 645
MaeI CTAG 2 cut(s) 450, 578
MaeII ACGT 1 cut(s) 9
MaeIII GTNAC 3 cut(s) 572, 1039, 1162
MalI GATC 4 cut(s) 176, 183, 987, 1049
MboI GATC 4 cut(s) 174, 181, 985, 1047
MboII GAAGA 4 cut(s) 91, 410, 484, 719
MhlI GDGCHC 2 cut(s) 327, 691
MluCI AATT 6 cut(s) 339, 353, 592, 770, 848, 856
MlyI GAGTC 3 cut(s) 77, 269, 933
Mph1103I ATGCAT 1 cut(s) 1025
MseI TTAA 4 cut(s) 246, 342, 408, 758
MslI CAYNNNNRTG 2 cut(s) 1018, 1205
MspA1I CMGCKG 1 cut(s) 225
MspI CCGG 6 cut(s) 48, 54, 139, 265, 335, 422
MspR9I CCNGG 2 cut(s) 885, 937
MvaI CCWGG 2 cut(s) 885, 937
MvnI CGCG 1 cut(s) 213
NcoI CCATGG 2 cut(s) 646, 713
NdeII GATC 4 cut(s) 174, 181, 985, 1047
NlaIII CATG 7 cut(s) 165, 630, 650, 717, 779, 977, 1210
NlaIV GGNNCC 5 cut(s) 52, 58, 143, 170, 882
NsiI ATGCAT 1 cut(s) 1025
NspI RCATGY 2 cut(s) 977, 1210
PagI TCATGA 1 cut(s) 775
PciSI GCTCTTC 1 cut(s) 702
PflFI GACNNNGTC 1 cut(s) 92
PfoI TCCNGGA 1 cut(s) 935
PkrI GCNGC 6 cut(s) 27, 120, 123, 212, 227, 660
PleI GAGTC 3 cut(s) 76, 269, 932
PpsI GAGTC 3 cut(s) 76, 269, 932
PpuMI RGGWCCY 2 cut(s) 487, 881
PshAI GACNNNNGTC 1 cut(s) 886
PshBI ATTAAT 1 cut(s) 342
PsiI TTATAA 1 cut(s) 588
Psp124BI GAGCTC 1 cut(s) 327
Psp5II RGGWCCY 2 cut(s) 487, 881
Psp6I CCWGG 2 cut(s) 883, 935
PspFI CCCAGC 2 cut(s) 59, 314
PspGI CCWGG 2 cut(s) 883, 935
PspN4I GGNNCC 5 cut(s) 52, 58, 143, 170, 882
PspPI GGNCC 6 cut(s) 56, 168, 267, 305, 487, 881
PspPPI RGGWCCY 2 cut(s) 487, 881
PsyI GACNNNGTC 1 cut(s) 92
PvuII CAGCTG 1 cut(s) 225
RsaI GTAC 2 cut(s) 644, 702
RsaNI GTAC 2 cut(s) 643, 701
RseI CAYNNNNRTG 2 cut(s) 1018, 1205
SacI GAGCTC 1 cut(s) 327
SapI GCTCTTC 1 cut(s) 702
SaqAI TTAA 4 cut(s) 246, 342, 408, 758
SatI GCNGC 6 cut(s) 26, 119, 122, 211, 226, 659
Sau3AI GATC 4 cut(s) 174, 181, 985, 1047
Sau96I GGNCC 6 cut(s) 56, 168, 267, 305, 487, 881
SchI GAGTC 3 cut(s) 77, 269, 933
ScrFI CCNGG 2 cut(s) 885, 937
SduI GDGCHC 2 cut(s) 327, 691
SinI GGWCC 6 cut(s) 56, 168, 267, 305, 487, 881
SmiI ATTTAAAT 1 cut(s) 409
SmiMI CAYNNNNRTG 2 cut(s) 1018, 1205
SmlI CTYRAG 2 cut(s) 874, 1087
SmoI CTYRAG 2 cut(s) 874, 1087
Sse9I AATT 6 cut(s) 339, 353, 592, 770, 848, 856
SsiI CCGC 4 cut(s) 122, 166, 211, 534
SspMI CTAG 2 cut(s) 450, 578
SstI GAGCTC 1 cut(s) 327
StyD4I CCNGG 2 cut(s) 883, 935
StyI CCWWGG 2 cut(s) 646, 713
SwaI ATTTAAAT 1 cut(s) 409
TaaI ACNGT 3 cut(s) 613, 686, 1037
TaiI ACGT 1 cut(s) 12
TaqI TCGA 3 cut(s) 102, 927, 994
TasI AATT 6 cut(s) 339, 353, 592, 770, 848, 856
TauI GCSGC 2 cut(s) 124, 213
Tru1I TTAA 4 cut(s) 246, 342, 408, 758
Tru9I TTAA 4 cut(s) 246, 342, 408, 758
TscAI CASTG 1 cut(s) 1207
TseI GCWGC 4 cut(s) 25, 118, 225, 658
TspDTI ATGAA 7 cut(s) 181, 356, 467, 615, 764, 926, 957
TspGWI ACGGA 2 cut(s) 134, 560
TspRI CASTG 1 cut(s) 1207
Tth111I GACNNNGTC 1 cut(s) 92
VpaK11BI GGWCC 6 cut(s) 56, 168, 267, 305, 487, 881
VspI ATTAAT 1 cut(s) 342
XapI RAATTY 4 cut(s) 353, 770, 848, 856
XceI RCATGY 2 cut(s) 977, 1210
XmiI GTMKAC 2 cut(s) 400, 598
XspI CTAG 2 cut(s) 450, 578
Zsp2I ATGCAT 1 cut(s) 1025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.