RchiOBHm_Chr2g0154541

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000113
Physical Location & Seq
Reverse (-)
71687032 .. 71689390
2359 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52352

Sequence Viewer

Length: 1179 bp
ATGGGGGACGGCGATTTGGTGCTTAAGCGAGCTCATACCGACTTCGGCGACTACGAGGAAGATGTGATTGCGGAGATCCTAGCTAGGCTACCGGTCAAATCCTTGATGCGTTTCCGGTGCGTCTGCAAATCATGGCGTGCTTTGATCTCCGAATCCTATTTTGTAAAGAAACACTTGAGCTACGGAGAGAGAGGCATCACCGAGAGCACTCCCAGATTCATTTTCATGTTGGATCCTCCCTTGTCCTTGGACTTTGAAGCCTTGATGAAGGATGATGATTGCGATGGCGCTGCTGGTGGTCAGTCTGCAGTCACTCAGTTGGATTTTCCGGTACCGAAAACTATCCCTGATTACGGTTGGAGAGTTGTTATTGGCTCTTGCAATGGCTTGGTATGTCTAGAAGTTCCCCCCGAGGCCATTATGTTATGGAACCCTGGTACAAGAGACTCCAAGGTTTTGCCAAAACCTCCTTGTGTTATAAACTCCGGGTTTAACTACCATTTTTTTGGATTTGGGTATGATTCTGCTAGTGACGACTACAAGGTGATACGGGGGTTCACTAATGATCTTGCTAAGAAAATCATGATTCACATATTTTCACTGAAAACAGGTACATGGAGGGTTCTCAAAGACATTGATTATGTTACATTTAAAACGTGGCAGGGGTTGTTCTTAAACGGAGCTCTGCATTGGTTATATAATCTACCTGAAGGGGGCTCAAGAATTTTGGCTTTTGATTTAGAGGCAGAGAAATTTCACAAGACGATTCCATTACCCTGTGATGACTGGTTTTATGATCCCTTGATTCATAAAAATTGTCTCTGTGTAGTTGCTTCCCCTACTGGAAACGACAGTTTCAACATATGGATGATGAAAGAATATGGGGTCAAGGAATCCTGGACTGAAGTTGTACAATTTTCTGTGGAGAATTATGCAGAGGATTATTATGAATTTAGAAGTTACTGCACGCCTGTGTGCATTTTAGAGAATGGTGTAGTTTTGAATGACAAGATGGGTGAGTATGAACACCTCTTGGTAGTATTATCTAATCTGAAGGAGAAGACATTCAAGCATGTTGTTGAGGTCGCGAACAGCATGGAGTTTATGACAGTCATTTACCGAGAGACATTAGTTTCCCCAGACATCCACACATACAAAACCAACATTATTTGTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

392

Amino Acids

44.85

Weight (kDa)

5.29

Isoelectric Point (pI)

33.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 55 6.5e-10 F-box domain
F-box-like PF12937 21 - 53 1.8e-06 F-box-like
FBA_3 PF08268 121 - 359 1.2e-24 F-box associated beta propeller domain
FBA_1 PF07734 126 - 347 1.3e-26 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 479
Acc65I GGTACC 1 cut(s) 331
AccB1I GGYRCC 1 cut(s) 331
AccII CGCG 1 cut(s) 1088
AciI CCGC 1 cut(s) 71
AclWI GGATC 4 cut(s) 70, 227, 240, 791
AcsI RAATTY 3 cut(s) 723, 752, 950
AcuI CTGAAG 3 cut(s) 729, 924, 1073
AfaI GTAC 4 cut(s) 333, 439, 613, 912
AfiI CCNNNNNNNGG 2 cut(s) 353, 713
AflII CTTAAG 1 cut(s) 23
AgeI ACCGGT 1 cut(s) 91
AgsI TTSAA 4 cut(s) 257, 859, 1003, 1069
AjnI CCWGG 2 cut(s) 433, 896
AleI CACNNNNGTG 1 cut(s) 971
AluBI AGCT 4 cut(s) 32, 83, 180, 683
AluI AGCT 4 cut(s) 32, 83, 180, 683
Alw21I GWGCWC 3 cut(s) 34, 209, 685
Alw26I GTCTC 3 cut(s) 438, 824, 1118
AlwI GGATC 4 cut(s) 70, 227, 240, 791
Ama87I CYCGRG 1 cut(s) 410
AoxI GGCC 1 cut(s) 414
ApeKI GCWGC 1 cut(s) 290
ApoI RAATTY 3 cut(s) 723, 752, 950
AsiGI ACCGGT 1 cut(s) 91
Asp700I GAANNNNTTC 1 cut(s) 1064
Asp718I GGTACC 1 cut(s) 331
AspLEI GCGC 1 cut(s) 290
AsuC2I CCSGG 1 cut(s) 487
AsuHPI GGTGA 3 cut(s) 190, 556, 1028
AvaI CYCGRG 1 cut(s) 410
BaeI ACNNNNGTAYC 2 cut(s) 539, 572
BamHI GGATCC 1 cut(s) 232
BanI GGYRCC 1 cut(s) 331
BanII GRGCYC 3 cut(s) 34, 685, 719
BbsI GAAGAC 1 cut(s) 1067
Bbv12I GWGCWC 3 cut(s) 34, 209, 685
BbvI GCAGC 1 cut(s) 277
BccI CCATC 2 cut(s) 278, 1006
BceAI ACGGC 1 cut(s) 25
BcgI CGANNNNNNTGC 2 cut(s) 272, 306
BciT130I CCWGG 2 cut(s) 435, 898
BcnI CCSGG 1 cut(s) 487
BcoDI GTCTC 3 cut(s) 438, 824, 1118
BfaI CTAG 4 cut(s) 80, 84, 398, 528
BfmI CTRYAG 1 cut(s) 306
BfoI RGCGCY 1 cut(s) 291
BfrI CTTAAG 1 cut(s) 23
BisI GCNGC 1 cut(s) 291
BlsI GCNGC 1 cut(s) 292
Bme1390I CCNGG 3 cut(s) 435, 487, 898
BmeT110I CYCGRG 1 cut(s) 410
BmiI GGNNCC 3 cut(s) 234, 333, 431
BmrFI CCNGG 3 cut(s) 435, 487, 898
BmsI GCATC 2 cut(s) 96, 204
BpiI GAAGAC 1 cut(s) 1067
BpuEI CTTGAG 2 cut(s) 196, 703
BpuMI CCSGG 1 cut(s) 487
BsaJI CCNNGG 4 cut(s) 246, 411, 433, 450
BsaWI WCCGGW 3 cut(s) 91, 114, 328
Bsc4I CCNNNNNNNGG 2 cut(s) 353, 713
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 2 cut(s) 791, 847
Bse3DI GCAATG 1 cut(s) 388
BseBI CCWGG 2 cut(s) 435, 898
BseDI CCNNGG 4 cut(s) 246, 411, 433, 450
BseGI GGATG 3 cut(s) 277, 873, 1143
BseLI CCNNNNNNNGG 2 cut(s) 353, 713
BseMI GCAATG 1 cut(s) 388
BseMII CTCAG 1 cut(s) 329
BseNI ACTGG 2 cut(s) 791, 847
BseXI GCAGC 1 cut(s) 277
BsgI GTGCAG 1 cut(s) 949
Bsh1236I CGCG 1 cut(s) 1088
BshFI GGCC 1 cut(s) 416
BshNI GGYRCC 1 cut(s) 331
BshTI ACCGGT 1 cut(s) 91
BsiHKAI GWGCWC 3 cut(s) 34, 209, 685
BsiHKCI CYCGRG 1 cut(s) 410
BsiSI CCGG 4 cut(s) 92, 115, 329, 486
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 2 cut(s) 353, 713
BsmAI GTCTC 3 cut(s) 438, 824, 1118
BsmFI GGGAC 1 cut(s) 20
BsnI GGCC 1 cut(s) 416
BsoBI CYCGRG 1 cut(s) 410
Bsp1286I GDGCHC 4 cut(s) 34, 209, 685, 719
Bsp1407I TGTACA 1 cut(s) 910
Bsp143I GATC 5 cut(s) 75, 144, 232, 565, 796
Bsp68I TCGCGA 1 cut(s) 1088
BspACI CCGC 1 cut(s) 71
BspANI GGCC 1 cut(s) 416
BspCNI CTCAG 1 cut(s) 328
BspFNI CGCG 1 cut(s) 1088
BspHI TCATGA 1 cut(s) 582
BspLI GGNNCC 3 cut(s) 234, 333, 431
BspMAI CTGCAG 1 cut(s) 310
BspPI GGATC 4 cut(s) 70, 227, 240, 791
BspT107I GGYRCC 1 cut(s) 331
BspTI CTTAAG 1 cut(s) 23
BsrDI GCAATG 1 cut(s) 388
BsrFI RCCGGY 1 cut(s) 91
BsrGI TGTACA 1 cut(s) 910
BsrI ACTGG 2 cut(s) 791, 847
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 4 cut(s) 246, 411, 433, 450
BssMI GATC 5 cut(s) 75, 144, 232, 565, 796
BssT1I CCWWGG 2 cut(s) 246, 450
Bst2UI CCWGG 2 cut(s) 435, 898
Bst4CI ACNGT 3 cut(s) 356, 854, 1111
BstAFI CTTAAG 1 cut(s) 23
BstAUI TGTACA 1 cut(s) 910
BstC8I GCNNGC 3 cut(s) 30, 138, 968
BstDEI CTNAG 2 cut(s) 315, 573
BstF5I GGATG 3 cut(s) 277, 873, 1143
BstFNI CGCG 1 cut(s) 1088
BstH2I RGCGCY 1 cut(s) 291
BstHHI GCGC 1 cut(s) 290
BstKTI GATC 5 cut(s) 78, 147, 235, 568, 799
BstMAI GTCTC 3 cut(s) 438, 824, 1118
BstMBI GATC 5 cut(s) 75, 144, 232, 565, 796
BstNI CCWGG 2 cut(s) 435, 898
BstNSI RCATGY 1 cut(s) 1076
BstSCI CCNGG 3 cut(s) 433, 485, 896
BstSFI CTRYAG 1 cut(s) 306
BstUI CGCG 1 cut(s) 1088
BstV1I GCAGC 1 cut(s) 277
BstV2I GAAGAC 1 cut(s) 1067
BstX2I RGATCY 2 cut(s) 75, 232
BstXI CCANNNNNNTGG 1 cut(s) 506
BstYI RGATCY 2 cut(s) 75, 232
BsuRI GGCC 1 cut(s) 416
BtgZI GCGATG 1 cut(s) 297
BtsCI GGATG 3 cut(s) 277, 873, 1143
BtsIMutI CAGTG 1 cut(s) 599
BtuMI TCGCGA 1 cut(s) 1088
Cac8I GCNNGC 3 cut(s) 30, 138, 968
CciI TCATGA 1 cut(s) 582
CfoI GCGC 1 cut(s) 290
Cfr10I RCCGGY 1 cut(s) 91
CseI GACGC 1 cut(s) 109
Csp6I GTAC 4 cut(s) 332, 438, 612, 911
CspAI ACCGGT 1 cut(s) 91
CviAII CATG 6 cut(s) 132, 226, 583, 615, 1073, 1096
CviQI GTAC 4 cut(s) 332, 438, 612, 911
DdeI CTNAG 2 cut(s) 315, 573
DpnI GATC 5 cut(s) 77, 146, 234, 567, 798
DpnII GATC 5 cut(s) 75, 144, 232, 565, 796
DraI TTTAAA 1 cut(s) 652
Ecl136II GAGCTC 2 cut(s) 32, 683
Eco130I CCWWGG 2 cut(s) 246, 450
Eco24I GRGCYC 3 cut(s) 34, 685, 719
Eco53kI GAGCTC 2 cut(s) 32, 683
Eco57I CTGAAG 3 cut(s) 729, 924, 1073
Eco88I CYCGRG 1 cut(s) 410
EcoICRI GAGCTC 2 cut(s) 32, 683
EcoRII CCWGG 2 cut(s) 433, 896
EcoT14I CCWWGG 2 cut(s) 246, 450
EcoT38I GRGCYC 3 cut(s) 34, 685, 719
ErhI CCWWGG 2 cut(s) 246, 450
FaeI CATG 6 cut(s) 135, 229, 586, 618, 1076, 1099
FalI AAGNNNNNCTT 2 cut(s) 158, 190
FaqI GGGAC 1 cut(s) 20
FatI CATG 6 cut(s) 131, 225, 582, 614, 1072, 1095
FauNDI CATATG 1 cut(s) 863
Fnu4HI GCNGC 1 cut(s) 291
FokI GGATG 3 cut(s) 284, 880, 1130
FriOI GRGCYC 3 cut(s) 34, 685, 719
Fsp4HI GCNGC 1 cut(s) 291
FspBI CTAG 4 cut(s) 80, 84, 398, 528
GlaI GCGC 1 cut(s) 289
GluI GCNGC 1 cut(s) 291
HaeII RGCGCY 1 cut(s) 291
HaeIII GGCC 1 cut(s) 416
HapII CCGG 4 cut(s) 92, 115, 329, 486
HgaI GACGC 1 cut(s) 109
HhaI GCGC 1 cut(s) 290
Hin1II CATG 6 cut(s) 135, 229, 586, 618, 1076, 1099
Hin6I GCGC 1 cut(s) 288
HinP1I GCGC 1 cut(s) 288
HinfI GANTC 8 cut(s) 152, 216, 446, 521, 586, 766, 805, 893
HpaII CCGG 4 cut(s) 92, 115, 329, 486
HphI GGTGA 3 cut(s) 190, 556, 1028
Hpy166II GTNNAC 1 cut(s) 558
Hpy188I TCNGA 2 cut(s) 151, 1053
Hpy188III TCNNGA 4 cut(s) 398, 583, 720, 1087
Hpy8I GTNNAC 1 cut(s) 558
HpyAV CCTTC 3 cut(s) 262, 704, 1048
HpyCH4III ACNGT 3 cut(s) 356, 854, 1111
HpyCH4IV ACGT 1 cut(s) 656
HpyCH4V TGCA 7 cut(s) 126, 308, 381, 688, 935, 966, 978
HpyF3I CTNAG 2 cut(s) 315, 573
HpySE526I ACGT 1 cut(s) 656
Hsp92II CATG 6 cut(s) 135, 229, 586, 618, 1076, 1099
HspAI GCGC 1 cut(s) 288
KpnI GGTACC 1 cut(s) 335
Kzo9I GATC 5 cut(s) 75, 144, 232, 565, 796
LmnI GCTCC 1 cut(s) 680
Lsp1109I GCAGC 1 cut(s) 277
LweI GCATC 2 cut(s) 96, 204
MaeI CTAG 4 cut(s) 80, 84, 398, 528
MaeII ACGT 1 cut(s) 656
MaeIII GTNAC 4 cut(s) 310, 530, 643, 959
MalI GATC 5 cut(s) 77, 146, 234, 567, 798
MboI GATC 5 cut(s) 75, 144, 232, 565, 796
MboII GAAGA 2 cut(s) 71, 1072
MflI RGATCY 2 cut(s) 75, 232
MhlI GDGCHC 4 cut(s) 34, 209, 685, 719
MluCI AATT 6 cut(s) 723, 752, 814, 914, 928, 950
MlyI GAGTC 1 cut(s) 440
MmeI TCCRAC 3 cut(s) 210, 300, 338
MroXI GAANNNNTTC 1 cut(s) 1064
MseI TTAA 4 cut(s) 24, 492, 651, 674
MslI CAYNNNNRTG 3 cut(s) 224, 866, 971
MspCI CTTAAG 1 cut(s) 23
MspI CCGG 4 cut(s) 92, 115, 329, 486
MspR9I CCNGG 3 cut(s) 435, 487, 898
MvaI CCWGG 2 cut(s) 435, 898
MvnI CGCG 1 cut(s) 1088
NciI CCSGG 1 cut(s) 487
NdeI CATATG 1 cut(s) 863
NdeII GATC 5 cut(s) 75, 144, 232, 565, 796
NlaIII CATG 6 cut(s) 135, 229, 586, 618, 1076, 1099
NlaIV GGNNCC 3 cut(s) 234, 333, 431
NmuCI GTSAC 2 cut(s) 310, 530
NruI TCGCGA 1 cut(s) 1088
NspI RCATGY 1 cut(s) 1076
OliI CACNNNNGTG 1 cut(s) 971
PagI TCATGA 1 cut(s) 582
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PdmI GAANNNNTTC 1 cut(s) 1064
PfeI GAWTC 7 cut(s) 152, 216, 521, 586, 766, 805, 893
PfoI TCCNGGA 1 cut(s) 896
PinAI ACCGGT 1 cut(s) 91
PkrI GCNGC 1 cut(s) 292
PleI GAGTC 1 cut(s) 440
PpsI GAGTC 1 cut(s) 440
PsiI TTATAA 1 cut(s) 479
Psp124BI GAGCTC 2 cut(s) 34, 685
Psp6I CCWGG 2 cut(s) 433, 896
PspGI CCWGG 2 cut(s) 433, 896
PspN4I GGNNCC 3 cut(s) 234, 333, 431
PstI CTGCAG 1 cut(s) 310
PsuI RGATCY 2 cut(s) 75, 232
RruI TCGCGA 1 cut(s) 1088
RsaI GTAC 4 cut(s) 333, 439, 613, 912
RsaNI GTAC 4 cut(s) 332, 438, 612, 911
RseI CAYNNNNRTG 3 cut(s) 224, 866, 971
SacI GAGCTC 2 cut(s) 34, 685
SaqAI TTAA 4 cut(s) 24, 492, 651, 674
SatI GCNGC 1 cut(s) 291
Sau3AI GATC 5 cut(s) 75, 144, 232, 565, 796
SchI GAGTC 1 cut(s) 440
ScrFI CCNGG 3 cut(s) 435, 487, 898
SduI GDGCHC 4 cut(s) 34, 209, 685, 719
SfaNI GCATC 2 cut(s) 96, 204
SfcI CTRYAG 1 cut(s) 306
SmiMI CAYNNNNRTG 3 cut(s) 224, 866, 971
SmlI CTYRAG 3 cut(s) 23, 175, 718
SmoI CTYRAG 3 cut(s) 23, 175, 718
Sse9I AATT 6 cut(s) 723, 752, 814, 914, 928, 950
SsiI CCGC 1 cut(s) 71
SspMI CTAG 4 cut(s) 80, 84, 398, 528
SstI GAGCTC 2 cut(s) 34, 685
StyD4I CCNGG 3 cut(s) 433, 485, 896
StyI CCWWGG 2 cut(s) 246, 450
TaaI ACNGT 3 cut(s) 356, 854, 1111
TaiI ACGT 1 cut(s) 659
TasI AATT 6 cut(s) 723, 752, 814, 914, 928, 950
TatI WGTACW 1 cut(s) 910
TfiI GAWTC 7 cut(s) 152, 216, 521, 586, 766, 805, 893
Tru1I TTAA 4 cut(s) 24, 492, 651, 674
Tru9I TTAA 4 cut(s) 24, 492, 651, 674
TscAI CASTG 1 cut(s) 606
TseFI GTSAC 2 cut(s) 310, 530
TseI GCWGC 1 cut(s) 290
Tsp45I GTSAC 2 cut(s) 310, 530
TspDTI ATGAA 7 cut(s) 208, 214, 281, 797, 887, 963, 1038
TspGWI ACGGA 2 cut(s) 198, 693
TspRI CASTG 1 cut(s) 606
Vha464I CTTAAG 1 cut(s) 23
XapI RAATTY 3 cut(s) 723, 752, 950
XbaI TCTAGA 1 cut(s) 397
XceI RCATGY 1 cut(s) 1076
XmnI GAANNNNTTC 1 cut(s) 1064
XspI CTAG 4 cut(s) 80, 84, 398, 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.