RchiOBHm_Chr2g0167131

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000113
Physical Location & Seq
Forward (+)
81763120 .. 81766657
3538 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53495

Sequence Viewer

Length: 1374 bp
ATGGCGGAGGACCGCGGTAGTGGTGGTGTGGTTAAGCGAATTCGGAGTGACTACTTCGATGAAGATATAGTTTCGGAGATACTGGCAAGGCTTCCGGTCAGATCTTTACTTCGATTCCGCTGTGTGTGCAAATCATGGCGTGCTCTGATTGCGGATTCGCACTTTGTGAAGAAACACTTACACTCGAGCTACGCAGAGAGAGGATTCGGCGACAACAACTCCAGGCTTCTGTTTCTAATGAATCCTCCGCTATCAATAGACTACGAAGCATTGAAGGATCTGAAGGAGGGTGGTGATGGTTGGTTTGCAAGAAGAGAGCTCCACTTTCCGGTGAAGCTTGCTGCTTACCAAAGAAATAGGATTTTGGGTTCTTGCAATGGGTTGATTTGTGTTGAATGCCAAGCGGTGGGGATTGTCGTATGGAACCCTTGCACCGGAGAATACAAGGTGCTACCAAATCCTCCTACAGATTGCCATCCTTCAGATTTTTATGGGTTTGGCTATGACTCCACAACTGATGATTACAAGATCATAAGGGGGCGTAGGTCTTCGGAGGAGACCCTGATTCACGTGTTTACGCTGAAAACCGGCTCATGGAGAACCATTCGGGATCAGGATTATGCCGAATTTAGGGGTAAAGGGTGCTTATTCAATGGAGCTCTACATTGGCTTGTGTCTACTTACCCAGGATCAAGAATTATGTCCTTTGGTGTGGCGGAGGAGAAGTTTGAGGAGACAGTTCCGTTACTAGATGATTATCATGTTTTTCATGGCGTATTAGTATATAAAGATCATCTGTGTGTATATCAGATCTTAGATGGCATCCCTGCTGTTTTATCAGTATGGTTGATGGAGGAATATGGGGCCAAGGATTCCTGGACTCAAGTTATAAAGTTTTCTTTCAAGAAATTACGTGGAGAGGAGTTGAAGCCCCTGTGCATTTTGCAGAATGGTGAAATTCTGATGCATAGGGTTATGTCTGATGATCCTTTTGCATTTAATGATCCTGATCCTGGTGTGTTTGATGAGGATCTTGATGATTTGTATTATGAACAACTTATGCAGGATGATCCTGATGTGTTTGATGATGATCCTGGTGTGTTTGATGAGGATCCTGATGAGTTGTATTATGAACAACTTATGCAGGATGATCCTGATGTGTTTGATGATGATCCTGGTGTGTCTAATGAGGATCTTGAGGAGTTGTATTATGAACAACTTATGCAGGATTATAATCAACACTGTATGTGGAATGCAGAAAGCCTATTGGTATTAACTAATCAAAAGACATCAAAGGCTGTTTTTGAAGTTGACTTGGGTTTTGGAGCTGCCACTTTCAGGCAGACTTTAGTTTCACCGGTAACTGGCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

457

Amino Acids

52.42

Weight (kDa)

4.61

Isoelectric Point (pI)

41.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 21 - 57 6.4e-10 F-box domain
F-box-like PF12937 22 - 55 5.9e-07 F-box-like
FBA_3 PF08268 117 - 331 1.3e-25 F-box associated beta propeller domain
FBA_1 PF07734 123 - 300 3.2e-25 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 890, 1233
AccB7I CCANNNNNTGG 1 cut(s) 406
AccI GTMKAC 1 cut(s) 677
AccII CGCG 1 cut(s) 15
AciI CCGC 8 cut(s) 5, 13, 15, 118, 152, 248, 404, 716
AcsI RAATTY 3 cut(s) 39, 626, 957
AcuI CTGAAG 2 cut(s) 302, 465
AcvI CACGTG 1 cut(s) 571
AdeI CACNNNGTG 1 cut(s) 166
AfiI CCNNNNNNNGG 8 cut(s) 328, 406, 434, 594, 630, 1013, 1338, 1364
AflIII ACRYGT 1 cut(s) 570
AgeI ACCGGT 1 cut(s) 1357
AgsI TTSAA 6 cut(s) 274, 395, 652, 904, 928, 1307
AjnI CCWGG 6 cut(s) 221, 685, 875, 1012, 1093, 1174
AloI GAACNNNNNNTCC 2 cut(s) 352, 384
AluBI AGCT 5 cut(s) 189, 319, 337, 659, 1328
AluI AGCT 5 cut(s) 189, 319, 337, 659, 1328
Alw21I GWGCWC 3 cut(s) 145, 321, 661
Alw26I GTCTC 2 cut(s) 551, 728
Ama87I CYCGRG 1 cut(s) 184
AoxI GGCC 1 cut(s) 864
ApeKI GCWGC 2 cut(s) 341, 1328
ApoI RAATTY 3 cut(s) 39, 626, 957
ArsI GACNNNNNNTTYG 2 cut(s) 1304, 1336
AsiGI ACCGGT 1 cut(s) 1357
AspS9I GGNCC 2 cut(s) 10, 864
AsuHPI GGTGA 4 cut(s) 305, 343, 965, 1347
AvaI CYCGRG 1 cut(s) 184
AvaII GGWCC 1 cut(s) 10
BamHI GGATCC 1 cut(s) 1111
BanII GRGCYC 2 cut(s) 321, 661
BbrPI CACGTG 1 cut(s) 571
BbsI GAAGAC 1 cut(s) 540
Bbv12I GWGCWC 3 cut(s) 145, 321, 661
BbvI GCAGC 2 cut(s) 328, 1315
BccI CCATC 4 cut(s) 290, 483, 812, 844
BciT130I CCWGG 6 cut(s) 223, 687, 877, 1014, 1095, 1176
BcoDI GTCTC 2 cut(s) 551, 728
BfaI CTAG 1 cut(s) 749
BfmI CTRYAG 1 cut(s) 465
BglII AGATCT 2 cut(s) 101, 810
BisI GCNGC 2 cut(s) 342, 1329
BlsI GCNGC 2 cut(s) 343, 1330
Bme1390I CCNGG 6 cut(s) 223, 687, 877, 1014, 1095, 1176
Bme18I GGWCC 1 cut(s) 10
BmeT110I CYCGRG 1 cut(s) 184
BmgT120I GGNCC 2 cut(s) 10, 864
BmiI GGNNCC 3 cut(s) 425, 865, 1113
BmrFI CCNGG 6 cut(s) 223, 687, 877, 1014, 1095, 1176
BmsI GCATC 2 cut(s) 831, 954
BpiI GAAGAC 1 cut(s) 540
BpmI CTGGAG 1 cut(s) 205
BpuEI CTTGAG 2 cut(s) 867, 1217
BsaAI YACGTR 2 cut(s) 571, 914
BsaBI GATNNNNATC 8 cut(s) 474, 756, 1008, 1029, 1089, 1110, 1170, 1233
BsaI GGTCTC 1 cut(s) 551
BsaJI CCNNGG 3 cut(s) 13, 685, 867
BsaWI WCCGGW 4 cut(s) 94, 328, 434, 1357
BsaXI ACNNNNNCTCC 4 cut(s) 203, 233, 710, 740
Bsc4I CCNNNNNNNGG 8 cut(s) 328, 406, 434, 594, 630, 1013, 1338, 1364
Bse118I RCCGGY 2 cut(s) 587, 1357
Bse1I ACTGG 2 cut(s) 87, 1369
Bse3DI GCAATG 1 cut(s) 382
Bse8I GATNNNNATC 8 cut(s) 474, 756, 1008, 1029, 1089, 1110, 1170, 1233
BseBI CCWGG 6 cut(s) 223, 687, 877, 1014, 1095, 1176
BseDI CCNNGG 3 cut(s) 13, 685, 867
BseGI GGATG 4 cut(s) 475, 822, 1072, 1153
BseJI GATNNNNATC 8 cut(s) 474, 756, 1008, 1029, 1089, 1110, 1170, 1233
BseLI CCNNNNNNNGG 8 cut(s) 328, 406, 434, 594, 630, 1013, 1338, 1364
BseMI GCAATG 1 cut(s) 382
BseNI ACTGG 2 cut(s) 87, 1369
BseRI GAGGAG 5 cut(s) 569, 734, 746, 935, 1214
BseXI GCAGC 2 cut(s) 328, 1315
Bsh1236I CGCG 1 cut(s) 15
BshFI GGCC 1 cut(s) 866
BshTI ACCGGT 1 cut(s) 1357
BsiHKAI GWGCWC 3 cut(s) 145, 321, 661
BsiHKCI CYCGRG 1 cut(s) 184
BsiSI CCGG 5 cut(s) 95, 329, 435, 588, 1358
BslI CCNNNNNNNGG 8 cut(s) 328, 406, 434, 594, 630, 1013, 1338, 1364
BsmAI GTCTC 2 cut(s) 551, 728
BsmI GAATGC 2 cut(s) 401, 1258
BsnI GGCC 1 cut(s) 866
Bso31I GGTCTC 1 cut(s) 551
BsoBI CYCGRG 1 cut(s) 184
Bsp1286I GDGCHC 3 cut(s) 145, 321, 661
BspACI CCGC 8 cut(s) 5, 13, 15, 118, 152, 248, 404, 716
BspANI GGCC 1 cut(s) 866
BspFNI CGCG 1 cut(s) 15
BspLI GGNNCC 3 cut(s) 425, 865, 1113
BspTNI GGTCTC 1 cut(s) 551
BsrDI GCAATG 1 cut(s) 382
BsrFI RCCGGY 2 cut(s) 587, 1357
BsrI ACTGG 2 cut(s) 87, 1369
BssAI RCCGGY 2 cut(s) 587, 1357
BssECI CCNNGG 3 cut(s) 13, 685, 867
BssT1I CCWWGG 1 cut(s) 867
Bst2UI CCWGG 6 cut(s) 223, 687, 877, 1014, 1095, 1176
Bst4CI ACNGT 2 cut(s) 739, 1244
Bst6I CTCTTC 1 cut(s) 307
BstBAI YACGTR 2 cut(s) 571, 914
BstC8I GCNNGC 2 cut(s) 141, 339
BstDEI CTNAG 1 cut(s) 814
BstDSI CCRYGG 1 cut(s) 13
BstF5I GGATG 4 cut(s) 475, 822, 1072, 1153
BstFNI CGCG 1 cut(s) 15
BstMAI GTCTC 2 cut(s) 551, 728
BstMWI GCNNNNNNNGC 2 cut(s) 126, 149
BstNI CCWGG 6 cut(s) 223, 687, 877, 1014, 1095, 1176
BstSCI CCNGG 6 cut(s) 221, 685, 875, 1012, 1093, 1174
BstSFI CTRYAG 1 cut(s) 465
BstUI CGCG 1 cut(s) 15
BstV1I GCAGC 2 cut(s) 328, 1315
BstV2I GAAGAC 1 cut(s) 540
BstX2I RGATCY 6 cut(s) 101, 277, 810, 1030, 1111, 1192
BstYI RGATCY 6 cut(s) 101, 277, 810, 1030, 1111, 1192
BsuRI GGCC 1 cut(s) 866
BtgI CCRYGG 1 cut(s) 13
BtsCI GGATG 4 cut(s) 475, 822, 1072, 1153
BtsIMutI CAGTG 1 cut(s) 1240
Cac8I GCNNGC 2 cut(s) 141, 339
Cfr10I RCCGGY 2 cut(s) 587, 1357
Cfr13I GGNCC 2 cut(s) 10, 864
Cfr42I CCGCGG 1 cut(s) 16
CspAI ACCGGT 1 cut(s) 1357
CviAII CATG 4 cut(s) 135, 594, 761, 770
DdeI CTNAG 1 cut(s) 814
DraIII CACNNNGTG 1 cut(s) 166
Eam1104I CTCTTC 1 cut(s) 307
EarI CTCTTC 1 cut(s) 307
EciI GGCGGA 2 cut(s) 20, 731
Ecl136II GAGCTC 2 cut(s) 319, 659
Eco130I CCWWGG 1 cut(s) 867
Eco24I GRGCYC 2 cut(s) 321, 661
Eco31I GGTCTC 1 cut(s) 551
Eco47I GGWCC 1 cut(s) 10
Eco53kI GAGCTC 2 cut(s) 319, 659
Eco57I CTGAAG 2 cut(s) 302, 465
Eco72I CACGTG 1 cut(s) 571
Eco88I CYCGRG 1 cut(s) 184
EcoICRI GAGCTC 2 cut(s) 319, 659
EcoRI GAATTC 1 cut(s) 39
EcoRII CCWGG 6 cut(s) 221, 685, 875, 1012, 1093, 1174
EcoT14I CCWWGG 1 cut(s) 867
EcoT22I ATGCAT 1 cut(s) 969
EcoT38I GRGCYC 2 cut(s) 321, 661
ErhI CCWWGG 1 cut(s) 867
FaeI CATG 4 cut(s) 138, 597, 764, 773
FalI AAGNNNNNCTT 2 cut(s) 161, 193
FatI CATG 4 cut(s) 134, 593, 760, 769
FauNDI CATATG 1 cut(s) 1370
FblI GTMKAC 1 cut(s) 677
Fnu4HI GCNGC 2 cut(s) 342, 1329
FokI GGATG 4 cut(s) 462, 809, 1079, 1160
FriOI GRGCYC 2 cut(s) 321, 661
Fsp4HI GCNGC 2 cut(s) 342, 1329
FspBI CTAG 1 cut(s) 749
GluI GCNGC 2 cut(s) 342, 1329
GsuI CTGGAG 1 cut(s) 205
HaeIII GGCC 1 cut(s) 866
HapII CCGG 5 cut(s) 95, 329, 435, 588, 1358
Hin1II CATG 4 cut(s) 138, 597, 764, 773
HincII GTYRAC 1 cut(s) 1312
HindII GTYRAC 1 cut(s) 1312
HindIII AAGCTT 1 cut(s) 335
HinfI GANTC 8 cut(s) 114, 155, 204, 241, 506, 565, 872, 880
HpaII CCGG 5 cut(s) 95, 329, 435, 588, 1358
HphI GGTGA 4 cut(s) 305, 343, 965, 1347
Hpy166II GTNNAC 3 cut(s) 576, 678, 1312
Hpy8I GTNNAC 3 cut(s) 576, 678, 1312
HpyAV CCTTC 3 cut(s) 268, 277, 489
HpyCH4III ACNGT 2 cut(s) 739, 1244
HpyCH4IV ACGT 2 cut(s) 570, 913
HpyF10VI GCNNNNNNNGC 2 cut(s) 126, 149
HpyF3I CTNAG 1 cut(s) 814
HpySE526I ACGT 2 cut(s) 570, 913
Hsp92II CATG 4 cut(s) 138, 597, 764, 773
KspI CCGCGG 1 cut(s) 16
LmnI GCTCC 3 cut(s) 324, 656, 1325
Lsp1109I GCAGC 2 cut(s) 328, 1315
LweI GCATC 2 cut(s) 831, 954
MaeI CTAG 1 cut(s) 749
MaeII ACGT 2 cut(s) 570, 913
MaeIII GTNAC 3 cut(s) 47, 744, 1360
MboII GAAGA 4 cut(s) 74, 181, 324, 540
MflI RGATCY 6 cut(s) 101, 277, 810, 1030, 1111, 1192
MhlI GDGCHC 3 cut(s) 145, 321, 661
MluCI AATT 5 cut(s) 39, 626, 696, 908, 957
MlyI GAGTC 2 cut(s) 500, 874
Mph1103I ATGCAT 1 cut(s) 969
MseI TTAA 3 cut(s) 33, 999, 1274
MslI CAYNNNNRTG 1 cut(s) 798
MspA1I CMGCKG 2 cut(s) 15, 120
MspI CCGG 5 cut(s) 95, 329, 435, 588, 1358
MspR9I CCNGG 6 cut(s) 223, 687, 877, 1014, 1095, 1176
Mva1269I GAATGC 2 cut(s) 401, 1258
MvaI CCWGG 6 cut(s) 223, 687, 877, 1014, 1095, 1176
MvnI CGCG 1 cut(s) 15
MwoI GCNNNNNNNGC 2 cut(s) 126, 149
NdeI CATATG 1 cut(s) 1370
NlaIII CATG 4 cut(s) 138, 597, 764, 773
NlaIV GGNNCC 3 cut(s) 425, 865, 1113
NmuCI GTSAC 1 cut(s) 47
NsiI ATGCAT 1 cut(s) 969
PaeR7I CTCGAG 1 cut(s) 184
PctI GAATGC 2 cut(s) 401, 1258
PfeI GAWTC 6 cut(s) 114, 155, 204, 241, 565, 872
PflMI CCANNNNNTGG 1 cut(s) 406
PfoI TCCNGGA 1 cut(s) 875
PinAI ACCGGT 1 cut(s) 1357
PkrI GCNGC 2 cut(s) 343, 1330
PleI GAGTC 2 cut(s) 500, 874
PmaCI CACGTG 1 cut(s) 571
PmlI CACGTG 1 cut(s) 571
PpsI GAGTC 2 cut(s) 500, 874
Ppu21I YACGTR 2 cut(s) 571, 914
PsiI TTATAA 2 cut(s) 890, 1233
Psp124BI GAGCTC 2 cut(s) 321, 661
Psp6I CCWGG 6 cut(s) 221, 685, 875, 1012, 1093, 1174
PspCI CACGTG 1 cut(s) 571
PspGI CCWGG 6 cut(s) 221, 685, 875, 1012, 1093, 1174
PspN4I GGNNCC 3 cut(s) 425, 865, 1113
PspPI GGNCC 2 cut(s) 10, 864
PspXI VCTCGAGB 1 cut(s) 184
PsuI RGATCY 6 cut(s) 101, 277, 810, 1030, 1111, 1192
RseI CAYNNNNRTG 1 cut(s) 798
SacI GAGCTC 2 cut(s) 321, 661
SacII CCGCGG 1 cut(s) 16
SaqAI TTAA 3 cut(s) 33, 999, 1274
SatI GCNGC 2 cut(s) 342, 1329
Sau96I GGNCC 2 cut(s) 10, 864
SchI GAGTC 2 cut(s) 500, 874
ScrFI CCNGG 6 cut(s) 223, 687, 877, 1014, 1095, 1176
SduI GDGCHC 3 cut(s) 145, 321, 661
SetI ASST 9 cut(s) 191, 321, 339, 450, 548, 573, 661, 916, 1330
SfaNI GCATC 2 cut(s) 831, 954
SfcI CTRYAG 1 cut(s) 465
Sfr274I CTCGAG 1 cut(s) 184
Sfr303I CCGCGG 1 cut(s) 16
SgrBI CCGCGG 1 cut(s) 16
SinI GGWCC 1 cut(s) 10
SlaI CTCGAG 1 cut(s) 184
SmiMI CAYNNNNRTG 1 cut(s) 798
SmlI CTYRAG 3 cut(s) 184, 882, 1196
SmoI CTYRAG 3 cut(s) 184, 882, 1196
Sse9I AATT 5 cut(s) 39, 626, 696, 908, 957
SsiI CCGC 8 cut(s) 5, 13, 15, 118, 152, 248, 404, 716
SspMI CTAG 1 cut(s) 749
SstI GAGCTC 2 cut(s) 321, 661
StyD4I CCNGG 6 cut(s) 221, 685, 875, 1012, 1093, 1174
StyI CCWWGG 1 cut(s) 867
TaaI ACNGT 2 cut(s) 739, 1244
TaiI ACGT 2 cut(s) 573, 916
TaqI TCGA 3 cut(s) 57, 112, 185
TasI AATT 5 cut(s) 39, 626, 696, 908, 957
TfiI GAWTC 6 cut(s) 114, 155, 204, 241, 565, 872
Tru1I TTAA 3 cut(s) 33, 999, 1274
Tru9I TTAA 3 cut(s) 33, 999, 1274
TscAI CASTG 1 cut(s) 1247
TseFI GTSAC 1 cut(s) 47
TseI GCWGC 2 cut(s) 341, 1328
Tsp45I GTSAC 1 cut(s) 47
TspDTI ATGAA 6 cut(s) 75, 254, 758, 1065, 1146, 1227
TspGWI ACGGA 1 cut(s) 732
TspRI CASTG 1 cut(s) 1247
Van91I CCANNNNNTGG 1 cut(s) 406
VpaK11BI GGWCC 1 cut(s) 10
XapI RAATTY 3 cut(s) 39, 626, 957
XhoI CTCGAG 1 cut(s) 184
XmiI GTMKAC 1 cut(s) 677
XspI CTAG 1 cut(s) 749
Zsp2I ATGCAT 1 cut(s) 969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.