Rorug02G0444400

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000113
Physical Location & Seq
Forward (+)
57086264 .. 57087423
1160 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0444400.1

Sequence Viewer

Length: 954 bp
ATGTCTCCTGTTGATGCAATGGCTGCTAGACTAGCCTCCTCTCTTGCTCTTGCTGAAGGCAAGAGACAGATTGATTTGCGACCAACGCAGGGCAAGGGTTTGCGTCAAGCAAACGTATTCTTGGTGGGCAAGCTTCTCACTGCTCGGGATTTCAAGGTCAAGTCCTTTTTGGGGATGTTTCGCAACGCTTGGAGGGTTAATGGGTCGTTGCAGGTGGAGGAAGCAGAAGGGCAGAGGGTGCTCTTCACGCTGTTGGACCCGTCTGATCATGTTCGGATCTGGCGGGGGGCGCCATGGGGATACAATCACGCGCCGGTGGCGCTAGCATGGTATGATGGCATAATGCCAGTGGAGAAAGTGCCTTTGACCATGGCATCGTATTGGATAACTTTGCCGGGAAACCCACCGGCGTTCCGGGTTGAAATCCCATTGAACAAACCATTGCCTTTCAAGCGGTGGTACTTGGTGGAGGATGAGGTTGAGTTTCGATGCCAATTCCGATATGACAAGCTATTTGGGAGATGCTCAACTCGTGGACTTATCACACATGTGGGATTGCCGTGCTCCAAGCCAGCGCTGGAGGAGGAGGAAGATGGAGCTAAACATACTGTTCTGGGGGCCCAGACGGCGGCGCCGGAGGTGAATGTTAGGGGCGCGCCGGTGCAAGGAGTTCTGGTAGCAGCAGGTTCAATGCTGGTTGTGGTGCGTGAGCTTCAAGAGACAGCAGGAACTCCAGAGTGCATAACTAGTAAGCGTCGGGAGCGAGAAGACAGCCTGATTATTTCTCCCAAGAAGCTGAAATTGAGTCTGGCTGTGGGCAAGAGAAATCTCATACTTGACTCTGAAAATCTTGGTCTGGATCAGGCACAGGAGGTGACCCAGCCTGGGAATGTGAAGCGGAAAAGAGGAAGACCTATTAGTAGTGGGAATAAGTCGTCCTTTGGTGACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

317

Amino Acids

35.08

Weight (kDa)

9.57

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 39 - 112 4e-06 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 202
Acc36I ACCTGC 2 cut(s) 202, 674
AccB1I GGYRCC 2 cut(s) 289, 631
AccII CGCG 2 cut(s) 311, 656
AciI CCGC 4 cut(s) 283, 454, 629, 898
AclWI GGATC 2 cut(s) 284, 867
AcuI CTGAAG 1 cut(s) 75
AcyI GRCGYC 2 cut(s) 290, 632
AfaI GTAC 1 cut(s) 461
AfeI AGCGCT 1 cut(s) 576
AfiI CCNNNNNNNGG 5 cut(s) 89, 171, 628, 665, 885
AflIII ACRYGT 1 cut(s) 547
AgsI TTSAA 6 cut(s) 154, 422, 433, 451, 690, 716
AhlI ACTAGT 1 cut(s) 746
AjnI CCWGG 1 cut(s) 883
AleI CACNNNNGTG 1 cut(s) 548
AluBI AGCT 5 cut(s) 133, 511, 599, 712, 796
AluI AGCT 5 cut(s) 133, 511, 599, 712, 796
Alw21I GWGCWC 2 cut(s) 243, 566
Alw26I GTCTC 3 cut(s) 9, 58, 713
AlwI GGATC 2 cut(s) 284, 867
Ama87I CYCGRG 1 cut(s) 144
Aor51HI AGCGCT 1 cut(s) 576
AoxI GGCC 1 cut(s) 618
ApaI GGGCCC 1 cut(s) 622
ApeKI GCWGC 2 cut(s) 23, 680
ArsI GACNNNNNNTTYG 2 cut(s) 497, 529
AscI GGCGCGCC 1 cut(s) 654
AspLEI GCGC 7 cut(s) 292, 313, 322, 577, 634, 656, 658
AspS9I GGNCC 3 cut(s) 256, 618, 619
AsuC2I CCSGG 2 cut(s) 396, 416
AsuHPI GGTGA 2 cut(s) 652, 886
AsuNHI GCTAGC 1 cut(s) 322
AvaI CYCGRG 1 cut(s) 144
AvaII GGWCC 1 cut(s) 256
BaeGI GKGCMC 1 cut(s) 622
BanI GGYRCC 2 cut(s) 289, 631
BanII GRGCYC 1 cut(s) 622
BauI CACGAG 1 cut(s) 531
BbsI GAAGAC 2 cut(s) 774, 916
Bbv12I GWGCWC 2 cut(s) 243, 566
BbvI GCAGC 2 cut(s) 10, 692
BccI CCATC 2 cut(s) 329, 587
BceAI ACGGC 2 cut(s) 544, 642
BciT130I CCWGG 1 cut(s) 885
BciVI GTATCC 1 cut(s) 293
BclI TGATCA 1 cut(s) 265
BcnI CCSGG 2 cut(s) 396, 416
BcoDI GTCTC 3 cut(s) 9, 58, 713
BcuI ACTAGT 1 cut(s) 746
BfaI CTAG 4 cut(s) 27, 32, 323, 747
BfoI RGCGCY 4 cut(s) 293, 323, 578, 635
BfuAI ACCTGC 2 cut(s) 202, 674
BfuI GTATCC 1 cut(s) 293
BglI GCCNNNNNGGC 1 cut(s) 626
BisI GCNGC 3 cut(s) 24, 630, 681
BlsI GCNGC 3 cut(s) 25, 631, 682
Bme1390I CCNGG 3 cut(s) 396, 416, 885
Bme18I GGWCC 1 cut(s) 256
BmeT110I CYCGRG 1 cut(s) 144
BmgT120I GGNCC 3 cut(s) 256, 618, 619
BmiI GGNNCC 5 cut(s) 258, 291, 619, 620, 633
BmrFI CCNGG 3 cut(s) 396, 416, 885
BmsI GCATC 4 cut(s) 4, 383, 479, 512
BmtI GCTAGC 1 cut(s) 326
BpiI GAAGAC 2 cut(s) 774, 916
BpmI CTGGAG 2 cut(s) 599, 717
BpuMI CCSGG 2 cut(s) 396, 416
BsaHI GRCGYC 2 cut(s) 290, 632
BsaJI CCNNGG 3 cut(s) 293, 369, 884
BsaXI ACNNNNNCTCC 2 cut(s) 660, 690
Bsc4I CCNNNNNNNGG 5 cut(s) 89, 171, 628, 665, 885
Bse118I RCCGGY 3 cut(s) 313, 406, 658
Bse1I ACTGG 1 cut(s) 347
Bse3DI GCAATG 2 cut(s) 24, 440
BseBI CCWGG 1 cut(s) 885
BseDI CCNNGG 3 cut(s) 293, 369, 884
BseGI GGATG 2 cut(s) 180, 478
BseLI CCNNNNNNNGG 5 cut(s) 89, 171, 628, 665, 885
BseMI GCAATG 2 cut(s) 24, 440
BseNI ACTGG 1 cut(s) 347
BsePI GCGCGC 1 cut(s) 654
BseRI GAGGAG 3 cut(s) 28, 596, 599
BseSI GKGCMC 1 cut(s) 622
BseXI GCAGC 2 cut(s) 10, 692
BseYI CCCAGC 1 cut(s) 879
Bsh1236I CGCG 2 cut(s) 311, 656
BshFI GGCC 1 cut(s) 620
BshNI GGYRCC 2 cut(s) 289, 631
BsiHKAI GWGCWC 2 cut(s) 243, 566
BsiHKCI CYCGRG 1 cut(s) 144
BsiSI CCGG 6 cut(s) 314, 395, 407, 415, 635, 659
BslI CCNNNNNNNGG 5 cut(s) 89, 171, 628, 665, 885
BsmAI GTCTC 3 cut(s) 9, 58, 713
BsnI GGCC 1 cut(s) 620
BsoBI CYCGRG 1 cut(s) 144
Bsp120I GGGCCC 1 cut(s) 618
Bsp1286I GDGCHC 3 cut(s) 243, 566, 622
Bsp143I GATC 3 cut(s) 265, 276, 859
Bsp19I CCATGG 2 cut(s) 293, 369
BspACI CCGC 4 cut(s) 283, 454, 629, 898
BspANI GGCC 1 cut(s) 620
BspFNI CGCG 2 cut(s) 311, 656
BspLI GGNNCC 5 cut(s) 258, 291, 619, 620, 633
BspMI ACCTGC 2 cut(s) 202, 674
BspOI GCTAGC 1 cut(s) 326
BspPI GGATC 2 cut(s) 284, 867
BspQI GCTCTTC 1 cut(s) 248
BspT107I GGYRCC 2 cut(s) 289, 631
BsrDI GCAATG 2 cut(s) 24, 440
BsrFI RCCGGY 3 cut(s) 313, 406, 658
BsrI ACTGG 1 cut(s) 347
BssAI RCCGGY 3 cut(s) 313, 406, 658
BssECI CCNNGG 3 cut(s) 293, 369, 884
BssHII GCGCGC 1 cut(s) 654
BssMI GATC 3 cut(s) 265, 276, 859
BssNI GRCGYC 2 cut(s) 290, 632
BssSI CACGAG 1 cut(s) 531
BssT1I CCWWGG 2 cut(s) 293, 369
Bst2BI CACGAG 1 cut(s) 531
Bst2UI CCWGG 1 cut(s) 885
Bst4CI ACNGT 1 cut(s) 610
Bst6I CTCTTC 1 cut(s) 248
BstACI GRCGYC 2 cut(s) 290, 632
BstAPI GCANNNNNTGC 2 cut(s) 23, 238
BstC8I GCNNGC 4 cut(s) 131, 324, 573, 656
BstDSI CCRYGG 2 cut(s) 293, 369
BstEII GGTNACC 1 cut(s) 874
BstF5I GGATG 2 cut(s) 180, 478
BstFNI CGCG 2 cut(s) 311, 656
BstH2I RGCGCY 4 cut(s) 293, 323, 578, 635
BstHHI GCGC 7 cut(s) 292, 313, 322, 577, 634, 656, 658
BstKTI GATC 3 cut(s) 268, 279, 862
BstMAI GTCTC 3 cut(s) 9, 58, 713
BstMBI GATC 3 cut(s) 265, 276, 859
BstNI CCWGG 1 cut(s) 885
BstNSI RCATGY 1 cut(s) 551
BstPI GGTNACC 1 cut(s) 874
BstSCI CCNGG 3 cut(s) 394, 414, 883
BstSLI GKGCMC 1 cut(s) 622
BstUI CGCG 2 cut(s) 311, 656
BstV1I GCAGC 2 cut(s) 10, 692
BstV2I GAAGAC 2 cut(s) 774, 916
BstX2I RGATCY 1 cut(s) 276
BstYI RGATCY 1 cut(s) 276
BsuI GTATCC 1 cut(s) 293
BsuRI GGCC 1 cut(s) 620
BtgI CCRYGG 2 cut(s) 293, 369
BtsCI GGATG 2 cut(s) 180, 478
BtsI GCAGTG 1 cut(s) 138
BtsIMutI CAGTG 2 cut(s) 138, 354
BveI ACCTGC 2 cut(s) 202, 674
Cac8I GCNNGC 4 cut(s) 131, 324, 573, 656
CfoI GCGC 7 cut(s) 292, 313, 322, 577, 634, 656, 658
Cfr10I RCCGGY 3 cut(s) 313, 406, 658
Cfr13I GGNCC 3 cut(s) 256, 618, 619
CseI GACGC 2 cut(s) 92, 743
Csp6I GTAC 1 cut(s) 460
CviAII CATG 5 cut(s) 269, 294, 327, 370, 548
CviQI GTAC 1 cut(s) 460
DinI GGCGCC 2 cut(s) 291, 633
DpnI GATC 3 cut(s) 267, 278, 861
DpnII GATC 3 cut(s) 265, 276, 859
Eam1104I CTCTTC 1 cut(s) 248
EarI CTCTTC 1 cut(s) 248
Eco130I CCWWGG 2 cut(s) 293, 369
Eco24I GRGCYC 1 cut(s) 622
Eco47I GGWCC 1 cut(s) 256
Eco47III AGCGCT 1 cut(s) 576
Eco57I CTGAAG 1 cut(s) 75
Eco88I CYCGRG 1 cut(s) 144
Eco91I GGTNACC 1 cut(s) 874
EcoO109I RGGNCCY 1 cut(s) 618
EcoO65I GGTNACC 1 cut(s) 874
EcoRII CCWGG 1 cut(s) 883
EcoT14I CCWWGG 2 cut(s) 293, 369
EcoT38I GRGCYC 1 cut(s) 622
EgeI GGCGCC 2 cut(s) 291, 633
EheI GGCGCC 2 cut(s) 291, 633
ErhI CCWWGG 2 cut(s) 293, 369
FaeI CATG 5 cut(s) 272, 297, 330, 373, 551
FalI AAGNNNNNCTT 1 cut(s) 923
FatI CATG 5 cut(s) 268, 293, 326, 369, 547
FauI CCCGC 1 cut(s) 276
FbaI TGATCA 1 cut(s) 265
Fnu4HI GCNGC 3 cut(s) 24, 630, 681
FokI GGATG 2 cut(s) 187, 485
FriOI GRGCYC 1 cut(s) 622
Fsp4HI GCNGC 3 cut(s) 24, 630, 681
FspBI CTAG 4 cut(s) 27, 32, 323, 747
GlaI GCGC 7 cut(s) 291, 312, 321, 576, 633, 655, 657
GluI GCNGC 3 cut(s) 24, 630, 681
GsaI CCCAGC 1 cut(s) 883
GsuI CTGGAG 2 cut(s) 599, 717
HaeII RGCGCY 4 cut(s) 293, 323, 578, 635
HaeIII GGCC 1 cut(s) 620
HapII CCGG 6 cut(s) 314, 395, 407, 415, 635, 659
HgaI GACGC 2 cut(s) 92, 743
HhaI GCGC 7 cut(s) 292, 313, 322, 577, 634, 656, 658
Hin1I GRCGYC 2 cut(s) 290, 632
Hin1II CATG 5 cut(s) 272, 297, 330, 373, 551
Hin6I GCGC 7 cut(s) 290, 311, 320, 575, 632, 654, 656
HinP1I GCGC 7 cut(s) 290, 311, 320, 575, 632, 654, 656
HindIII AAGCTT 1 cut(s) 131
HinfI GANTC 2 cut(s) 805, 839
HpaII CCGG 6 cut(s) 314, 395, 407, 415, 635, 659
HphI GGTGA 2 cut(s) 652, 886
Hpy166II GTNNAC 1 cut(s) 536
Hpy188I TCNGA 4 cut(s) 265, 276, 500, 844
Hpy188III TCNNGA 5 cut(s) 146, 716, 734, 758, 857
Hpy8I GTNNAC 1 cut(s) 536
Hpy99I CGWCG 1 cut(s) 759
HpyAV CCTTC 2 cut(s) 50, 221
HpyCH4III ACNGT 1 cut(s) 610
HpyCH4IV ACGT 1 cut(s) 114
HpyCH4V TGCA 4 cut(s) 17, 211, 664, 741
HpySE526I ACGT 1 cut(s) 114
Hsp92I GRCGYC 2 cut(s) 290, 632
Hsp92II CATG 5 cut(s) 272, 297, 330, 373, 551
HspAI GCGC 7 cut(s) 290, 311, 320, 575, 632, 654, 656
KasI GGCGCC 2 cut(s) 289, 631
Ksp22I TGATCA 1 cut(s) 265
Kzo9I GATC 3 cut(s) 265, 276, 859
LguI GCTCTTC 1 cut(s) 248
LmnI GCTCC 3 cut(s) 569, 596, 760
Lsp1109I GCAGC 2 cut(s) 10, 692
LweI GCATC 4 cut(s) 4, 383, 479, 512
MaeI CTAG 4 cut(s) 27, 32, 323, 747
MaeII ACGT 1 cut(s) 114
MaeIII GTNAC 2 cut(s) 874, 944
MalI GATC 3 cut(s) 267, 278, 861
MboI GATC 3 cut(s) 265, 276, 859
MboII GAAGA 4 cut(s) 235, 602, 779, 921
MflI RGATCY 1 cut(s) 276
MhlI GDGCHC 3 cut(s) 243, 566, 622
MluCI AATT 2 cut(s) 494, 800
Mly113I GGCGCC 2 cut(s) 290, 632
MlyI GAGTC 2 cut(s) 814, 833
MmeI TCCRAC 1 cut(s) 234
MseI TTAA 1 cut(s) 198
MslI CAYNNNNRTG 1 cut(s) 548
MspI CCGG 6 cut(s) 314, 395, 407, 415, 635, 659
MspR9I CCNGG 3 cut(s) 396, 416, 885
MvaI CCWGG 1 cut(s) 885
MvnI CGCG 2 cut(s) 311, 656
NarI GGCGCC 2 cut(s) 290, 632
NciI CCSGG 2 cut(s) 396, 416
NcoI CCATGG 2 cut(s) 293, 369
NdeII GATC 3 cut(s) 265, 276, 859
NheI GCTAGC 1 cut(s) 322
NlaIII CATG 5 cut(s) 272, 297, 330, 373, 551
NlaIV GGNNCC 5 cut(s) 258, 291, 619, 620, 633
NmuCI GTSAC 2 cut(s) 874, 944
NspI RCATGY 1 cut(s) 551
OliI CACNNNNGTG 1 cut(s) 548
PalAI GGCGCGCC 1 cut(s) 654
PaqCI CACCTGC 1 cut(s) 202
PauI GCGCGC 1 cut(s) 654
PciI ACATGT 1 cut(s) 547
PciSI GCTCTTC 1 cut(s) 248
PkrI GCNGC 3 cut(s) 25, 631, 682
PleI GAGTC 2 cut(s) 813, 833
PluTI GGCGCC 2 cut(s) 293, 635
PpsI GAGTC 2 cut(s) 813, 833
PscI ACATGT 1 cut(s) 547
Psp6I CCWGG 1 cut(s) 883
PspEI GGTNACC 1 cut(s) 874
PspFI CCCAGC 1 cut(s) 879
PspGI CCWGG 1 cut(s) 883
PspN4I GGNNCC 5 cut(s) 258, 291, 619, 620, 633
PspOMI GGGCCC 1 cut(s) 618
PspPI GGNCC 3 cut(s) 256, 618, 619
PsuI RGATCY 1 cut(s) 276
PteI GCGCGC 1 cut(s) 654
RsaI GTAC 1 cut(s) 461
RsaNI GTAC 1 cut(s) 460
RseI CAYNNNNRTG 1 cut(s) 548
SapI GCTCTTC 1 cut(s) 248
SaqAI TTAA 1 cut(s) 198
SatI GCNGC 3 cut(s) 24, 630, 681
Sau3AI GATC 3 cut(s) 265, 276, 859
Sau96I GGNCC 3 cut(s) 256, 618, 619
SchI GAGTC 2 cut(s) 814, 833
ScrFI CCNGG 3 cut(s) 396, 416, 885
SduI GDGCHC 3 cut(s) 243, 566, 622
SfaNI GCATC 4 cut(s) 4, 383, 479, 512
SfoI GGCGCC 2 cut(s) 291, 633
SgrAI CRCCGGYG 3 cut(s) 313, 406, 658
SgsI GGCGCGCC 1 cut(s) 654
SinI GGWCC 1 cut(s) 256
SmiMI CAYNNNNRTG 1 cut(s) 548
SpeI ACTAGT 1 cut(s) 746
Sse9I AATT 2 cut(s) 494, 800
SsiI CCGC 4 cut(s) 283, 454, 629, 898
SspDI GGCGCC 2 cut(s) 289, 631
SspMI CTAG 4 cut(s) 27, 32, 323, 747
StyD4I CCNGG 3 cut(s) 394, 414, 883
StyI CCWWGG 2 cut(s) 293, 369
TaaI ACNGT 1 cut(s) 610
TaiI ACGT 1 cut(s) 117
TaqI TCGA 1 cut(s) 487
TasI AATT 2 cut(s) 494, 800
TauI GCSGC 1 cut(s) 632
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TscAI CASTG 2 cut(s) 145, 354
TseFI GTSAC 2 cut(s) 874, 944
TseI GCWGC 2 cut(s) 23, 680
Tsp45I GTSAC 2 cut(s) 874, 944
TspRI CASTG 2 cut(s) 145, 354
VpaK11BI GGWCC 1 cut(s) 256
XceI RCATGY 1 cut(s) 551
XcmI CCANNNNNNNNNTGG 1 cut(s) 574
XspI CTAG 4 cut(s) 27, 32, 323, 747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.