Rmu_sc0002705.1_g000031

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002705.1
OG0000113
Physical Location & Seq
Reverse (-)
129577 .. 133109
3533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002705.1_g000031.1.cds

Sequence Viewer

Length: 1566 bp
atggccaccaattccatggcggacgacggcggcgttcacaagcgagctcgtaccagtgtcgccgacctcgacggcgtccttgatgagatactggcaaggctaccggtcaaatcactgatgcgatttcgctgcgtctgcacgtcatggcgtgctctcatctcccagtctcacttcaactacgcaagcaagggcttcaccgagaacacctccaggctcttgatatcaatgagtcctctccaatcccaagactgtgaagcatccaaggacttatccctagactgtgaggcattgaaggagttgaaggatgacggagatgctcatcttgcaattggaaagctcgagtttccgtttcgtggattaggttttaatgccactatgaagttttgcggatttggttatgattccactaatgatgattataaggtagtgagagggtacaatcatatagttaggggttctgaggaacccatggttcaggtctttagtttaaaatcaggttcatggaggacccatgagggtctcggttacttttgcttggcagggccggcgtgcttgttaaatggtgctctgcattggcaagggaccataattgatgattttcatccaagagattcaagggttatctcttttgatttagcagaggaaaagtttcgggagatgcttccattgccctctctggttgggtttagatgcgactttattcctggagattgtcttggtgtatatgaatatagcattctacacgatgagatcttcaggtttagaatatggatgatgaaggaatatggggtcaaggaatcctggactgaagttgcttcttttgatttaccaaaagattataaattctcactcgtgatgcctctgtgcttattattagagaatggtgaaggtttgatcgccagcagatgtgattttcagtacttggtattctatagcttcaaggaacagacatttaggaatgtttataggacccacaacggatggaaatttgatggactcatttacagggagactttagtttcaccagtcgccagtggaattgcagacatctctaagatcaacacttggaatcccggaagctactttcactcacaaggtcaatataataaaacgcgacccttccttccttctcatagtcacaaacggagtgagcgagcaaaacagagagggaaaatggcttatcatgtaatcctccacgccctctctcattcactctcttcctcctctagaaagctcaggccaactaactctgatattcacactttcaatctcaccttccctacacttcactgcagaatttctctccaaataaaccatgtttctttacaagaaacccagagcccagatgtcccaagacttgaaaaccctccaagcccagatggcaattccgagtcttctcccaaaagctatatttgggtcaatcccagcagccctagagcttcacagctcagcaagaaatcctacgattccaggtatgcttctttagtcaaagtagtcgagtccttgaactctggtgatccaagtgaaagtgatgttgttggtattttaaagggtttattgaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

521

Amino Acids

58.83

Weight (kDa)

7.26

Isoelectric Point (pI)

47.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 420, 840
AccII CGCG 1 cut(s) 1114
AciI CCGC 3 cut(s) 20, 30, 387
AclWI GGATC 1 cut(s) 1511
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 842, 986, 1296
AcuI CTGAAG 2 cut(s) 739, 828
AcyI GRCGYC 1 cut(s) 75
AfaI GTAC 3 cut(s) 52, 437, 920
AfiI CCNNNNNNNGG 1 cut(s) 353
AgeI ACCGGT 1 cut(s) 103
AgsI TTSAA 9 cut(s) 175, 292, 301, 615, 940, 1267, 1361, 1507, 1561
AjiI CACGTC 1 cut(s) 141
AjnI CCWGG 4 cut(s) 209, 703, 800, 1469
AluBI AGCT 8 cut(s) 47, 337, 936, 1080, 1234, 1407, 1439, 1447
AluI AGCT 8 cut(s) 47, 337, 936, 1080, 1234, 1407, 1439, 1447
Alw21I GWGCWC 3 cut(s) 49, 154, 568
Alw26I GTCTC 3 cut(s) 171, 524, 1004
AlwI GGATC 1 cut(s) 1511
Ama87I CYCGRG 1 cut(s) 338
AoxI GGCC 3 cut(s) 3, 542, 1238
ApeKI GCWGC 2 cut(s) 129, 1428
ApoI RAATTY 3 cut(s) 842, 986, 1296
AsiGI ACCGGT 1 cut(s) 103
Asp700I GAANNNNTTC 1 cut(s) 648
AspS9I GGNCC 4 cut(s) 507, 542, 582, 969
AsuC2I CCSGG 1 cut(s) 1074
AsuHPI GGTGA 5 cut(s) 187, 896, 1014, 1264, 1526
AvaI CYCGRG 1 cut(s) 338
AvaII GGWCC 3 cut(s) 507, 582, 969
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 2 cut(s) 49, 1343
BauI CACGAG 1 cut(s) 851
BbsI GAAGAC 1 cut(s) 1386
Bbv12I GWGCWC 3 cut(s) 49, 154, 568
BbvI GCAGC 2 cut(s) 116, 1440
BccI CCATC 3 cut(s) 975, 986, 1373
BceAI ACGGC 2 cut(s) 43, 88
BcgI CGANNNNNNTGC 2 cut(s) 111, 145
BciT130I CCWGG 4 cut(s) 211, 705, 802, 1471
BcnI CCSGG 1 cut(s) 1074
BcoDI GTCTC 3 cut(s) 171, 524, 1004
BfaI CTAG 3 cut(s) 275, 1227, 1434
BfmI CTRYAG 2 cut(s) 931, 1291
BglI GCCNNNNNGGC 1 cut(s) 1380
BglII AGATCT 1 cut(s) 750
BisI GCNGC 3 cut(s) 31, 130, 1429
BlpI GCTNAGC 1 cut(s) 1448
BlsI GCNGC 3 cut(s) 32, 131, 1430
BmcAI AGTACT 1 cut(s) 920
Bme1390I CCNGG 5 cut(s) 211, 705, 802, 1074, 1471
Bme18I GGWCC 3 cut(s) 507, 582, 969
BmeT110I CYCGRG 1 cut(s) 338
BmgBI CACGTC 1 cut(s) 141
BmgT120I GGNCC 4 cut(s) 507, 542, 582, 969
BmiI GGNNCC 4 cut(s) 465, 509, 583, 971
BmrFI CCNGG 5 cut(s) 211, 705, 802, 1074, 1471
BmrI ACTGGG 1 cut(s) 157
BmsI GCATC 6 cut(s) 108, 266, 304, 648, 680, 846
BmuI ACTGGG 1 cut(s) 157
BpiI GAAGAC 1 cut(s) 1386
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpmI CTGGAG 2 cut(s) 193, 726
Bpu10I CCTNAGC 1 cut(s) 1235
Bpu1102I GCTNAGC 1 cut(s) 1448
BpuMI CCSGG 1 cut(s) 1074
BsaBI GATNNNNATC 2 cut(s) 318, 600
BsaHI GRCGYC 1 cut(s) 75
BsaI GGTCTC 1 cut(s) 524
BsaJI CCNNGG 3 cut(s) 15, 261, 468
BsaWI WCCGGW 1 cut(s) 103
Bsc4I CCNNNNNNNGG 1 cut(s) 353
Bse118I RCCGGY 2 cut(s) 103, 544
Bse1I ACTGG 5 cut(s) 54, 96, 163, 1025, 1032
Bse3DI GCAATG 1 cut(s) 665
Bse8I GATNNNNATC 2 cut(s) 318, 600
BseBI CCWGG 4 cut(s) 211, 705, 802, 1471
BseDI CCNNGG 3 cut(s) 15, 261, 468
BseGI GGATG 5 cut(s) 257, 310, 601, 777, 986
BseJI GATNNNNATC 2 cut(s) 318, 600
BseLI CCNNNNNNNGG 1 cut(s) 353
BseMI GCAATG 1 cut(s) 665
BseMII CTCAG 3 cut(s) 450, 1249, 1462
BseNI ACTGG 5 cut(s) 54, 96, 163, 1025, 1032
BseRI GAGGAG 1 cut(s) 1213
BseXI GCAGC 2 cut(s) 116, 1440
BseYI CCCAGC 1 cut(s) 1424
BsgI GTGCAG 1 cut(s) 121
Bsh1236I CGCG 1 cut(s) 1114
BshFI GGCC 3 cut(s) 5, 544, 1240
BshTI ACCGGT 1 cut(s) 103
BsiHKAI GWGCWC 3 cut(s) 49, 154, 568
BsiHKCI CYCGRG 1 cut(s) 338
BsiSI CCGG 3 cut(s) 104, 545, 1074
BslFI GGGAC 2 cut(s) 595, 1334
BslI CCNNNNNNNGG 1 cut(s) 353
BsmAI GTCTC 3 cut(s) 171, 524, 1004
BsmFI GGGAC 2 cut(s) 595, 1334
BsmI GAATGC 1 cut(s) 735
BsnI GGCC 3 cut(s) 5, 544, 1240
Bso31I GGTCTC 1 cut(s) 524
BsoBI CYCGRG 1 cut(s) 338
Bsp1286I GDGCHC 4 cut(s) 49, 154, 568, 1343
Bsp143I GATC 4 cut(s) 750, 894, 1056, 1516
Bsp1720I GCTNAGC 1 cut(s) 1448
Bsp19I CCATGG 2 cut(s) 15, 468
BspACI CCGC 3 cut(s) 20, 30, 387
BspANI GGCC 3 cut(s) 5, 544, 1240
BspCNI CTCAG 3 cut(s) 451, 1248, 1461
BspFNI CGCG 1 cut(s) 1114
BspLI GGNNCC 4 cut(s) 465, 509, 583, 971
BspMAI CTGCAG 1 cut(s) 1295
BspPI GGATC 1 cut(s) 1511
BspTNI GGTCTC 1 cut(s) 524
BsrDI GCAATG 1 cut(s) 665
BsrFI RCCGGY 2 cut(s) 103, 544
BsrI ACTGG 5 cut(s) 54, 96, 163, 1025, 1032
BssAI RCCGGY 2 cut(s) 103, 544
BssECI CCNNGG 3 cut(s) 15, 261, 468
BssMI GATC 4 cut(s) 750, 894, 1056, 1516
BssNI GRCGYC 1 cut(s) 75
BssSI CACGAG 1 cut(s) 851
BssT1I CCWWGG 3 cut(s) 15, 261, 468
Bst2BI CACGAG 1 cut(s) 851
Bst2UI CCWGG 4 cut(s) 211, 705, 802, 1471
Bst4CI ACNGT 2 cut(s) 251, 281
Bst6I CTCTTC 1 cut(s) 1222
BstACI GRCGYC 1 cut(s) 75
BstC8I GCNNGC 7 cut(s) 45, 150, 184, 546, 550, 901, 1155
BstDEI CTNAG 4 cut(s) 459, 1053, 1235, 1448
BstDSI CCRYGG 2 cut(s) 15, 468
BstF5I GGATG 5 cut(s) 257, 310, 601, 777, 986
BstFNI CGCG 1 cut(s) 1114
BstKTI GATC 4 cut(s) 753, 897, 1059, 1519
BstMAI GTCTC 3 cut(s) 171, 524, 1004
BstMBI GATC 4 cut(s) 750, 894, 1056, 1516
BstMWI GCNNNNNNNGC 5 cut(s) 135, 323, 545, 667, 1380
BstNI CCWGG 4 cut(s) 211, 705, 802, 1471
BstSCI CCNGG 5 cut(s) 209, 703, 800, 1072, 1469
BstSFI CTRYAG 2 cut(s) 931, 1291
BstUI CGCG 1 cut(s) 1114
BstV1I GCAGC 2 cut(s) 116, 1440
BstV2I GAAGAC 1 cut(s) 1386
BstX2I RGATCY 1 cut(s) 750
BstXI CCANNNNNNTGG 1 cut(s) 16
BstYI RGATCY 1 cut(s) 750
BsuRI GGCC 3 cut(s) 5, 544, 1240
BtgI CCRYGG 2 cut(s) 15, 468
BtrI CACGTC 1 cut(s) 141
BtsCI GGATG 5 cut(s) 257, 310, 601, 777, 986
BtsI GCAGTG 1 cut(s) 1288
BtsIMutI CAGTG 4 cut(s) 61, 113, 1039, 1288
Cac8I GCNNGC 7 cut(s) 45, 150, 184, 546, 550, 901, 1155
Cfr10I RCCGGY 2 cut(s) 103, 544
Cfr13I GGNCC 4 cut(s) 507, 542, 582, 969
CseI GACGC 2 cut(s) 64, 121
Csp6I GTAC 3 cut(s) 51, 436, 919
CspAI ACCGGT 1 cut(s) 103
CviAII CATG 7 cut(s) 16, 144, 469, 501, 512, 1184, 1316
CviQI GTAC 3 cut(s) 51, 436, 919
DdeI CTNAG 4 cut(s) 459, 1053, 1235, 1448
DpnI GATC 4 cut(s) 752, 896, 1058, 1518
DpnII GATC 4 cut(s) 750, 894, 1056, 1516
DraI TTTAAA 2 cut(s) 489, 1548
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 1222
EarI CTCTTC 1 cut(s) 1222
EciI GGCGGA 1 cut(s) 35
Ecl136II GAGCTC 1 cut(s) 47
Eco130I CCWWGG 3 cut(s) 15, 261, 468
Eco24I GRGCYC 2 cut(s) 49, 1343
Eco31I GGTCTC 1 cut(s) 524
Eco32I GATATC 1 cut(s) 222
Eco47I GGWCC 3 cut(s) 507, 582, 969
Eco53kI GAGCTC 1 cut(s) 47
Eco57I CTGAAG 2 cut(s) 739, 828
Eco88I CYCGRG 1 cut(s) 338
EcoICRI GAGCTC 1 cut(s) 47
EcoO109I RGGNCCY 2 cut(s) 507, 969
EcoRII CCWGG 4 cut(s) 209, 703, 800, 1469
EcoRV GATATC 1 cut(s) 222
EcoT14I CCWWGG 3 cut(s) 15, 261, 468
EcoT38I GRGCYC 2 cut(s) 49, 1343
ErhI CCWWGG 3 cut(s) 15, 261, 468
FaeI CATG 7 cut(s) 19, 147, 472, 504, 515, 1187, 1319
FaqI GGGAC 2 cut(s) 595, 1334
FatI CATG 7 cut(s) 15, 143, 468, 500, 511, 1183, 1315
Fnu4HI GCNGC 3 cut(s) 31, 130, 1429
FokI GGATG 5 cut(s) 244, 317, 588, 784, 993
FriOI GRGCYC 2 cut(s) 49, 1343
Fsp4HI GCNGC 3 cut(s) 31, 130, 1429
FspBI CTAG 3 cut(s) 275, 1227, 1434
GluI GCNGC 3 cut(s) 31, 130, 1429
GsaI CCCAGC 1 cut(s) 1428
GsuI CTGGAG 2 cut(s) 193, 726
HaeIII GGCC 3 cut(s) 5, 544, 1240
HapII CCGG 3 cut(s) 104, 545, 1074
HgaI GACGC 2 cut(s) 64, 121
Hin1I GRCGYC 1 cut(s) 75
Hin1II CATG 7 cut(s) 19, 147, 472, 504, 515, 1187, 1319
HinfI GANTC 9 cut(s) 229, 401, 611, 797, 996, 1069, 1391, 1466, 1499
HpaII CCGG 3 cut(s) 104, 545, 1074
HphI GGTGA 5 cut(s) 187, 896, 1014, 1264, 1526
Hpy166II GTNNAC 1 cut(s) 37
Hpy188I TCNGA 3 cut(s) 460, 1252, 1390
Hpy188III TCNNGA 4 cut(s) 217, 653, 853, 1227
Hpy8I GTNNAC 1 cut(s) 37
Hpy99I CGWCG 2 cut(s) 29, 74
HpyAV CCTTC 8 cut(s) 286, 295, 772, 881, 1129, 1133, 1137, 1285
HpyCH4III ACNGT 2 cut(s) 251, 281
HpyCH4IV ACGT 1 cut(s) 140
HpyCH4V TGCA 5 cut(s) 138, 326, 571, 1043, 1293
HpyF10VI GCNNNNNNNGC 5 cut(s) 135, 323, 545, 667, 1380
HpyF3I CTNAG 4 cut(s) 459, 1053, 1235, 1448
HpySE526I ACGT 1 cut(s) 140
Hsp92I GRCGYC 1 cut(s) 75
Hsp92II CATG 7 cut(s) 19, 147, 472, 504, 515, 1187, 1319
KroI GCCGGC 1 cut(s) 544
KroNI GCCGGC 1 cut(s) 546
Kzo9I GATC 4 cut(s) 750, 894, 1056, 1516
Lsp1109I GCAGC 2 cut(s) 116, 1440
LweI GCATC 6 cut(s) 108, 266, 304, 648, 680, 846
MaeI CTAG 3 cut(s) 275, 1227, 1434
MaeII ACGT 1 cut(s) 140
MaeIII GTNAC 2 cut(s) 524, 1136
MalI GATC 4 cut(s) 752, 896, 1058, 1518
MboI GATC 4 cut(s) 750, 894, 1056, 1516
MboII GAAGA 3 cut(s) 745, 1209, 1386
MfeI CAATTG 1 cut(s) 327
MflI RGATCY 1 cut(s) 750
MhlI GDGCHC 4 cut(s) 49, 154, 568, 1343
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 9 cut(s) 10, 327, 588, 842, 986, 1038, 1296, 1384, 1561
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 238, 990, 1400, 1508
Mox20I TGGCCA 1 cut(s) 5
MroNI GCCGGC 1 cut(s) 544
MroXI GAANNNNTTC 1 cut(s) 648
MscI TGGCCA 1 cut(s) 5
MseI TTAA 5 cut(s) 366, 488, 557, 1547, 1564
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 3 cut(s) 104, 545, 1074
MspR9I CCNGG 5 cut(s) 211, 705, 802, 1074, 1471
MunI CAATTG 1 cut(s) 327
Mva1269I GAATGC 1 cut(s) 735
MvaI CCWGG 4 cut(s) 211, 705, 802, 1471
MvnI CGCG 1 cut(s) 1114
MwoI GCNNNNNNNGC 5 cut(s) 135, 323, 545, 667, 1380
NaeI GCCGGC 1 cut(s) 546
NciI CCSGG 1 cut(s) 1074
NcoI CCATGG 2 cut(s) 15, 468
NdeII GATC 4 cut(s) 750, 894, 1056, 1516
NgoMIV GCCGGC 1 cut(s) 544
NlaIII CATG 7 cut(s) 19, 147, 472, 504, 515, 1187, 1319
NlaIV GGNNCC 4 cut(s) 465, 509, 583, 971
NmuCI GTSAC 1 cut(s) 1136
PaeR7I CTCGAG 1 cut(s) 338
PcsI WCGNNNNNNNCGW 3 cut(s) 30, 66, 1150
PctI GAATGC 1 cut(s) 735
PdiI GCCGGC 1 cut(s) 546
PdmI GAANNNNTTC 1 cut(s) 648
PfeI GAWTC 5 cut(s) 401, 611, 797, 1069, 1466
PflFI GACNNNGTC 1 cut(s) 74
PfoI TCCNGGA 3 cut(s) 703, 800, 1072
PinAI ACCGGT 1 cut(s) 103
PkrI GCNGC 3 cut(s) 32, 131, 1430
PleI GAGTC 4 cut(s) 237, 990, 1399, 1507
PpsI GAGTC 4 cut(s) 237, 990, 1399, 1507
PpuMI RGGWCCY 2 cut(s) 507, 969
PsiI TTATAA 2 cut(s) 420, 840
Psp124BI GAGCTC 1 cut(s) 49
Psp5II RGGWCCY 2 cut(s) 507, 969
Psp6I CCWGG 4 cut(s) 209, 703, 800, 1469
PspFI CCCAGC 1 cut(s) 1424
PspGI CCWGG 4 cut(s) 209, 703, 800, 1469
PspN4I GGNNCC 4 cut(s) 465, 509, 583, 971
PspPI GGNCC 4 cut(s) 507, 542, 582, 969
PspPPI RGGWCCY 2 cut(s) 507, 969
PspXI VCTCGAGB 1 cut(s) 338
PstI CTGCAG 1 cut(s) 1295
PsuI RGATCY 1 cut(s) 750
PsyI GACNNNGTC 1 cut(s) 74
RsaI GTAC 3 cut(s) 52, 437, 920
RsaNI GTAC 3 cut(s) 51, 436, 919
SacI GAGCTC 1 cut(s) 49
SaqAI TTAA 5 cut(s) 366, 488, 557, 1547, 1564
SatI GCNGC 3 cut(s) 31, 130, 1429
Sau3AI GATC 4 cut(s) 750, 894, 1056, 1516
Sau96I GGNCC 4 cut(s) 507, 542, 582, 969
ScaI AGTACT 1 cut(s) 920
SchI GAGTC 4 cut(s) 238, 990, 1400, 1508
ScrFI CCNGG 5 cut(s) 211, 705, 802, 1074, 1471
SduI GDGCHC 4 cut(s) 49, 154, 568, 1343
SfaNI GCATC 6 cut(s) 108, 266, 304, 648, 680, 846
SfcI CTRYAG 2 cut(s) 931, 1291
Sfr274I CTCGAG 1 cut(s) 338
SinI GGWCC 3 cut(s) 507, 582, 969
SlaI CTCGAG 1 cut(s) 338
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
Sse9I AATT 9 cut(s) 10, 327, 588, 842, 986, 1038, 1296, 1384, 1561
SsiI CCGC 3 cut(s) 20, 30, 387
SspMI CTAG 3 cut(s) 275, 1227, 1434
SstI GAGCTC 1 cut(s) 49
StyD4I CCNGG 5 cut(s) 209, 703, 800, 1072, 1469
StyI CCWWGG 3 cut(s) 15, 261, 468
TaaI ACNGT 2 cut(s) 251, 281
TaiI ACGT 1 cut(s) 143
TaqI TCGA 3 cut(s) 69, 339, 1497
TasI AATT 9 cut(s) 10, 327, 588, 842, 986, 1038, 1296, 1384, 1561
TatI WGTACW 1 cut(s) 918
TauI GCSGC 1 cut(s) 33
TfiI GAWTC 5 cut(s) 401, 611, 797, 1069, 1466
Tru1I TTAA 5 cut(s) 366, 488, 557, 1547, 1564
Tru9I TTAA 5 cut(s) 366, 488, 557, 1547, 1564
TscAI CASTG 4 cut(s) 61, 120, 1039, 1295
TseFI GTSAC 1 cut(s) 1136
TseI GCWGC 2 cut(s) 129, 1428
Tsp45I GTSAC 1 cut(s) 1136
TspDTI ATGAA 5 cut(s) 392, 489, 590, 741, 791
TspGWI ACGGA 4 cut(s) 324, 336, 993, 1159
TspRI CASTG 4 cut(s) 61, 120, 1039, 1295
Tth111I GACNNNGTC 1 cut(s) 74
VpaK11BI GGWCC 3 cut(s) 507, 582, 969
XapI RAATTY 3 cut(s) 842, 986, 1296
XbaI TCTAGA 1 cut(s) 1226
XcmI CCANNNNNNNNNTGG 1 cut(s) 13
XhoI CTCGAG 1 cut(s) 338
XmnI GAANNNNTTC 1 cut(s) 648
XspI CTAG 3 cut(s) 275, 1227, 1434
ZrmI AGTACT 1 cut(s) 920
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.