pycom15g13040

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0000113
Physical Location & Seq
Forward (+)
8924535 .. 8925845
1311 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g13040.1

Sequence Viewer

Length: 1311 bp
ATGGGAACCTTATTGGATCATGAACACGATGATCAGCGGCAGCTTCCCTATGAGATTGTGGAGGAAATTCTGCTGCAACTGCCGGTGAAGACCCTCCTTCGGTTCAGAAGCGTATGCAAGCCATGGCGTGCTCTCATCTCCGACCCAAAGTTTGTCAAGTCACACCTCCTTATCCGCTATACCAAACAAGATGACGATGACGATGATTGTGATCATGATCATGATACTCACGGCAAAACTACTTCGTCAAGAGCACGACTCATGCTCTCCTCTTTGTCCCTCCTCCAGTCCGTCCACGTAGAAGTTATTAATACCACTACTATTGATGCACCCGCAACGGCAACCTTGCCATCCCGTGGCGACGGTGAAGCAGAAAGTCTAGCAGAAGCAAAGGCAGAAGCAGCCGGCACAACTGGTGCTAATATTGCTACTAGCGTCGTGGAGGCGGAGCATGAGTACTCTGTGACAATGAGGCGGCCGGTCAAAGACATGAAGATTGTCGGCTCTTGTAACGGCCTGGTGTGTTTGGTGGTTGACTCGGAAGATATGATGATTTATAATCCATCCACCAGGCAGGTTCATGCAGCCCCAAAGTTGTCGACAATCTCCGGTAAGGATTACTTCTATGGCTTCGGTTACGATTCGCGCAAGGAAGACTATAAAATAGTGAGGGCCACTTCTTCAAGTAAGGCCGGCGTTTTCGCCACCCAACTTGACATTTATTCTTTGAAGACCAATACATGGAGAGCCAGGTCCGAAACCCTGCCTTTTTACTTTCTGTTCAACCTTGTCGGAACCCTACTCAACGGGGCTCTCCACTGGGCAGTCCGCCGCGGAAAGACTACCGATCAAGCTTACGCAAACGGTGATGGTGAGAGGCCTTTCTCAATCGTTTCTTTCGATATAGCGGAGGAGACGTACCGGCAAGTTCCCCTACCGGGCAACGGCGACAAGAATTTCTCGTTCTATGGTTTGGGGGTTTTAGGAGGGCGGCTGAGTATGCTTCACAGCCCTCATGGGTCTGATTACCAGGTGTGTTTAATGAACGAGTACGGGGTCAAGGCATCTTGGTCTATTTTCACTACCATTCCGCTGAAGATGGATTCTGAATACCTAGGGCTGATGTCACTTCTGAGTATTTTGAAGAACGGGGAGATTCTAATCCTCTTGCATCAAAGGAAACTAGTCATTTACAATCCGGCAGACAGAAACTTCCGAGCCGTCTTTGCCGGGGATGTACACTCTTCTCAAGTGGCTTTGTACACGGAGAGCCTTGCTCCTCCCACAGCCAGAGGCGGAGAAGCAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

437

Amino Acids

48.37

Weight (kDa)

5.97

Isoelectric Point (pI)

36.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 52 4.8e-11 F-box domain
F-box-like PF12937 14 - 51 1.9e-08 F-box-like
FBA_1 PF07734 147 - 397 4.9e-26 F-box associated beta propeller domain
FBA_3 PF08268 151 - 416 2.7e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 558
Acc36I ACCTGC 1 cut(s) 565
AccB7I CCANNNNNTGG 2 cut(s) 356, 741
AccI GTMKAC 1 cut(s) 599
AccII CGCG 2 cut(s) 646, 834
AclWI GGATC 1 cut(s) 24
AcoI YGGCCR 1 cut(s) 476
AcsI RAATTY 2 cut(s) 66, 955
AcuI CTGAAG 1 cut(s) 1115
AfaI GTAC 5 cut(s) 458, 920, 1052, 1239, 1262
AfiI CCNNNNNNNGG 5 cut(s) 99, 356, 741, 938, 944
AgsI TTSAA 4 cut(s) 684, 730, 784, 1144
AhlI ACTAGT 1 cut(s) 1183
AjnI CCWGG 4 cut(s) 516, 569, 749, 1029
AluBI AGCT 2 cut(s) 43, 854
AluI AGCT 2 cut(s) 43, 854
Alw21I GWGCWC 2 cut(s) 133, 256
Alw26I GTCTC 1 cut(s) 908
AlwI GGATC 1 cut(s) 24
AoxI GGCC 5 cut(s) 476, 514, 672, 690, 878
ApeKI GCWGC 4 cut(s) 40, 73, 401, 584
ApoI RAATTY 2 cut(s) 66, 955
ArsI GACNNNNNNTTYG 2 cut(s) 134, 166
AseI ATTAAT 1 cut(s) 309
AspA2I CCTAGG 1 cut(s) 1114
AspLEI GCGC 1 cut(s) 648
AspS9I GGNCC 2 cut(s) 672, 753
AsuC2I CCSGG 2 cut(s) 939, 1231
AsuHPI GGTGA 4 cut(s) 97, 377, 878, 884
AvaII GGWCC 1 cut(s) 753
AvrII CCTAGG 1 cut(s) 1114
BanII GRGCYC 1 cut(s) 814
BbsI GAAGAC 3 cut(s) 95, 660, 737
Bbv12I GWGCWC 2 cut(s) 133, 256
BbvI GCAGC 4 cut(s) 52, 60, 413, 596
BccI CCATC 4 cut(s) 358, 571, 863, 1093
BceAI ACGGC 5 cut(s) 247, 354, 529, 961, 1205
BciT130I CCWGG 4 cut(s) 518, 571, 751, 1031
BclI TGATCA 3 cut(s) 31, 211, 217
BcnI CCSGG 2 cut(s) 939, 1231
BcoDI GTCTC 1 cut(s) 908
BcuI ACTAGT 1 cut(s) 1183
BfaI CTAG 4 cut(s) 380, 432, 1115, 1184
BfuAI ACCTGC 1 cut(s) 565
BisI GCNGC 8 cut(s) 38, 41, 74, 402, 476, 585, 832, 992
BlnI CCTAGG 1 cut(s) 1114
BlsI GCNGC 8 cut(s) 39, 42, 75, 403, 477, 586, 833, 993
BmcAI AGTACT 1 cut(s) 458
Bme1390I CCNGG 6 cut(s) 518, 571, 751, 939, 1031, 1231
Bme18I GGWCC 1 cut(s) 753
BmgT120I GGNCC 2 cut(s) 672, 753
BmiI GGNNCC 2 cut(s) 7, 796
BmrFI CCNGG 6 cut(s) 518, 571, 751, 939, 1031, 1231
BmrI ACTGGG 1 cut(s) 829
BmsI GCATC 3 cut(s) 316, 1073, 1180
BmuI ACTGGG 1 cut(s) 829
BpiI GAAGAC 3 cut(s) 95, 660, 737
BplI GAGNNNNNCTC 4 cut(s) 243, 275, 1261, 1293
BpmI CTGGAG 1 cut(s) 269
BpuEI CTTGAG 1 cut(s) 1233
BpuMI CCSGG 2 cut(s) 939, 1231
BsaAI YACGTR 1 cut(s) 298
BsaBI GATNNNNATC 3 cut(s) 210, 216, 1160
BsaJI CCNNGG 5 cut(s) 122, 355, 832, 1114, 1230
BsaWI WCCGGW 1 cut(s) 608
BsaXI ACNNNNNCTCC 4 cut(s) 440, 470, 902, 932
Bsc4I CCNNNNNNNGG 5 cut(s) 99, 356, 741, 938, 944
Bse118I RCCGGY 5 cut(s) 82, 404, 478, 692, 921
Bse1I ACTGG 3 cut(s) 286, 418, 824
Bse8I GATNNNNATC 3 cut(s) 210, 216, 1160
BseBI CCWGG 4 cut(s) 518, 571, 751, 1031
BseDI CCNNGG 5 cut(s) 122, 355, 832, 1114, 1230
BseGI GGATG 3 cut(s) 350, 563, 1240
BseJI GATNNNNATC 3 cut(s) 210, 216, 1160
BseLI CCNNNNNNNGG 5 cut(s) 99, 356, 741, 938, 944
BseMII CTCAG 2 cut(s) 986, 1124
BseNI ACTGG 3 cut(s) 286, 418, 824
BseRI GAGGAG 4 cut(s) 259, 272, 926, 1269
BseX3I CGGCCG 1 cut(s) 476
BseXI GCAGC 4 cut(s) 52, 60, 413, 596
Bsh1236I CGCG 2 cut(s) 646, 834
Bsh1285I CGRYCG 1 cut(s) 479
BshFI GGCC 5 cut(s) 478, 516, 674, 692, 880
BsiEI CGRYCG 1 cut(s) 479
BsiHKAI GWGCWC 2 cut(s) 133, 256
BsiSI CCGG 9 cut(s) 83, 405, 479, 609, 693, 922, 938, 1199, 1230
BslFI GGGAC 1 cut(s) 262
BslI CCNNNNNNNGG 5 cut(s) 99, 356, 741, 938, 944
BsmAI GTCTC 1 cut(s) 908
BsmBI CGTCTC 1 cut(s) 908
BsmFI GGGAC 1 cut(s) 262
BsnI GGCC 5 cut(s) 478, 516, 674, 692, 880
Bsp1286I GDGCHC 3 cut(s) 133, 256, 814
Bsp1407I TGTACA 2 cut(s) 1237, 1260
Bsp143I GATC 5 cut(s) 16, 31, 211, 217, 847
Bsp19I CCATGG 1 cut(s) 122
BspANI GGCC 5 cut(s) 478, 516, 674, 692, 880
BspCNI CTCAG 2 cut(s) 987, 1125
BspFNI CGCG 2 cut(s) 646, 834
BspHI TCATGA 3 cut(s) 19, 214, 220
BspLI GGNNCC 2 cut(s) 7, 796
BspMI ACCTGC 1 cut(s) 565
BspPI GGATC 1 cut(s) 24
BsrFI RCCGGY 5 cut(s) 82, 404, 478, 692, 921
BsrGI TGTACA 2 cut(s) 1237, 1260
BsrI ACTGG 3 cut(s) 286, 418, 824
BssAI RCCGGY 5 cut(s) 82, 404, 478, 692, 921
BssECI CCNNGG 5 cut(s) 122, 355, 832, 1114, 1230
BssMI GATC 5 cut(s) 16, 31, 211, 217, 847
BssT1I CCWWGG 2 cut(s) 122, 1114
Bst2UI CCWGG 4 cut(s) 518, 571, 751, 1031
Bst4CI ACNGT 2 cut(s) 365, 866
Bst6I CTCTTC 1 cut(s) 1249
BstAUI TGTACA 2 cut(s) 1237, 1260
BstBAI YACGTR 1 cut(s) 298
BstC8I GCNNGC 4 cut(s) 119, 129, 406, 694
BstDEI CTNAG 2 cut(s) 995, 1133
BstDSI CCRYGG 3 cut(s) 122, 355, 832
BstF5I GGATG 3 cut(s) 350, 563, 1240
BstFNI CGCG 2 cut(s) 646, 834
BstHHI GCGC 1 cut(s) 648
BstKTI GATC 5 cut(s) 19, 34, 214, 220, 850
BstMAI GTCTC 1 cut(s) 908
BstMBI GATC 5 cut(s) 16, 31, 211, 217, 847
BstMCI CGRYCG 1 cut(s) 479
BstMWI GCNNNNNNNGC 5 cut(s) 79, 401, 425, 1000, 1226
BstNI CCWGG 4 cut(s) 518, 571, 751, 1031
BstSCI CCNGG 6 cut(s) 516, 569, 749, 937, 1029, 1229
BstUI CGCG 2 cut(s) 646, 834
BstV1I GCAGC 4 cut(s) 52, 60, 413, 596
BstV2I GAAGAC 3 cut(s) 95, 660, 737
BstZI CGGCCG 1 cut(s) 476
BsuRI GGCC 5 cut(s) 478, 516, 674, 692, 880
BtgI CCRYGG 3 cut(s) 122, 355, 832
BtsCI GGATG 3 cut(s) 350, 563, 1240
BtsIMutI CAGTG 1 cut(s) 817
BveI ACCTGC 1 cut(s) 565
Cac8I GCNNGC 4 cut(s) 119, 129, 406, 694
CciI TCATGA 3 cut(s) 19, 214, 220
CfoI GCGC 1 cut(s) 648
Cfr10I RCCGGY 5 cut(s) 82, 404, 478, 692, 921
Cfr13I GGNCC 2 cut(s) 672, 753
Cfr42I CCGCGG 1 cut(s) 835
CseI GACGC 1 cut(s) 424
CsiI ACCWGGT 1 cut(s) 1029
Csp6I GTAC 5 cut(s) 457, 919, 1051, 1238, 1261
CspCI CAANNNNNGTGG 4 cut(s) 304, 339, 694, 729
CviQI GTAC 5 cut(s) 457, 919, 1051, 1238, 1261
DdeI CTNAG 2 cut(s) 995, 1133
DpnI GATC 5 cut(s) 18, 33, 213, 219, 849
DpnII GATC 5 cut(s) 16, 31, 211, 217, 847
EaeI YGGCCR 1 cut(s) 476
EagI CGGCCG 1 cut(s) 476
Eam1104I CTCTTC 1 cut(s) 1249
EarI CTCTTC 1 cut(s) 1249
EciI GGCGGA 3 cut(s) 461, 818, 1311
EclXI CGGCCG 1 cut(s) 476
Eco130I CCWWGG 2 cut(s) 122, 1114
Eco147I AGGCCT 1 cut(s) 880
Eco24I GRGCYC 1 cut(s) 814
Eco47I GGWCC 1 cut(s) 753
Eco52I CGGCCG 1 cut(s) 476
Eco57I CTGAAG 1 cut(s) 1115
EcoRII CCWGG 4 cut(s) 516, 569, 749, 1029
EcoT14I CCWWGG 2 cut(s) 122, 1114
EcoT38I GRGCYC 1 cut(s) 814
ErhI CCWWGG 2 cut(s) 122, 1114
Esp3I CGTCTC 1 cut(s) 908
FalI AAGNNNNNCTT 2 cut(s) 605, 637
FaqI GGGAC 1 cut(s) 262
FauI CCCGC 1 cut(s) 340
FbaI TGATCA 3 cut(s) 31, 211, 217
FblI GTMKAC 1 cut(s) 599
Fnu4HI GCNGC 8 cut(s) 38, 41, 74, 402, 476, 585, 832, 992
FokI GGATG 3 cut(s) 337, 550, 1247
FriOI GRGCYC 1 cut(s) 814
Fsp4HI GCNGC 8 cut(s) 38, 41, 74, 402, 476, 585, 832, 992
FspBI CTAG 4 cut(s) 380, 432, 1115, 1184
GlaI GCGC 1 cut(s) 647
GluI GCNGC 8 cut(s) 38, 41, 74, 402, 476, 585, 832, 992
GsuI CTGGAG 1 cut(s) 269
HaeIII GGCC 5 cut(s) 478, 516, 674, 692, 880
HapII CCGG 9 cut(s) 83, 405, 479, 609, 693, 922, 938, 1199, 1230
HgaI GACGC 1 cut(s) 424
HhaI GCGC 1 cut(s) 648
Hin6I GCGC 1 cut(s) 646
HinP1I GCGC 1 cut(s) 646
HincII GTYRAC 2 cut(s) 535, 600
HindII GTYRAC 2 cut(s) 535, 600
HindIII AAGCTT 1 cut(s) 852
HinfI GANTC 5 cut(s) 258, 536, 641, 1103, 1156
HpaII CCGG 9 cut(s) 83, 405, 479, 609, 693, 922, 938, 1199, 1230
HphI GGTGA 4 cut(s) 97, 377, 878, 884
Hpy166II GTNNAC 5 cut(s) 295, 535, 600, 1240, 1263
Hpy188III TCNNGA 4 cut(s) 20, 215, 221, 249
Hpy8I GTNNAC 5 cut(s) 295, 535, 600, 1240, 1263
Hpy99I CGWCG 2 cut(s) 365, 440
HpyAV CCTTC 1 cut(s) 107
HpyCH4III ACNGT 2 cut(s) 365, 866
HpyCH4IV ACGT 2 cut(s) 297, 917
HpyCH4V TGCA 5 cut(s) 76, 117, 329, 584, 1171
HpyF10VI GCNNNNNNNGC 5 cut(s) 79, 401, 425, 1000, 1226
HpyF3I CTNAG 2 cut(s) 995, 1133
HpySE526I ACGT 2 cut(s) 297, 917
HspAI GCGC 1 cut(s) 646
KroI GCCGGC 2 cut(s) 404, 692
KroNI GCCGGC 2 cut(s) 406, 694
Ksp22I TGATCA 3 cut(s) 31, 211, 217
KspI CCGCGG 1 cut(s) 835
Kzo9I GATC 5 cut(s) 16, 31, 211, 217, 847
LmnI GCTCC 2 cut(s) 448, 1282
Lsp1109I GCAGC 4 cut(s) 52, 60, 413, 596
LweI GCATC 3 cut(s) 316, 1073, 1180
MabI ACCWGGT 1 cut(s) 1029
MaeI CTAG 4 cut(s) 380, 432, 1115, 1184
MaeII ACGT 2 cut(s) 297, 917
MaeIII GTNAC 5 cut(s) 159, 463, 509, 635, 1125
MalI GATC 5 cut(s) 18, 33, 213, 219, 849
MboI GATC 5 cut(s) 16, 31, 211, 217, 847
MboII GAAGA 9 cut(s) 100, 505, 554, 665, 672, 742, 1108, 1156, 1236
MhlI GDGCHC 3 cut(s) 133, 256, 814
MluCI AATT 2 cut(s) 66, 955
MlyI GAGTC 2 cut(s) 252, 530
MmeI TCCRAC 2 cut(s) 165, 772
MroNI GCCGGC 2 cut(s) 404, 692
MseI TTAA 2 cut(s) 309, 1040
MslI CAYNNNNRTG 1 cut(s) 219
MspA1I CMGCKG 3 cut(s) 37, 834, 1093
MspI CCGG 9 cut(s) 83, 405, 479, 609, 693, 922, 938, 1199, 1230
MspR9I CCNGG 6 cut(s) 518, 571, 751, 939, 1031, 1231
MvaI CCWGG 4 cut(s) 518, 571, 751, 1031
MvnI CGCG 2 cut(s) 646, 834
MwoI GCNNNNNNNGC 5 cut(s) 79, 401, 425, 1000, 1226
NaeI GCCGGC 2 cut(s) 406, 694
NciI CCSGG 2 cut(s) 939, 1231
NcoI CCATGG 1 cut(s) 122
NdeII GATC 5 cut(s) 16, 31, 211, 217, 847
NgoMIV GCCGGC 2 cut(s) 404, 692
NlaIV GGNNCC 2 cut(s) 7, 796
NmuCI GTSAC 3 cut(s) 159, 463, 1125
PagI TCATGA 3 cut(s) 19, 214, 220
PceI AGGCCT 1 cut(s) 880
PcsI WCGNNNNNNNCGW 1 cut(s) 897
PdiI GCCGGC 2 cut(s) 406, 694
PfeI GAWTC 3 cut(s) 641, 1103, 1156
PflMI CCANNNNNTGG 2 cut(s) 356, 741
PkrI GCNGC 8 cut(s) 39, 42, 75, 403, 477, 586, 833, 993
PleI GAGTC 2 cut(s) 252, 530
PpsI GAGTC 2 cut(s) 252, 530
Ppu21I YACGTR 1 cut(s) 298
PshBI ATTAAT 1 cut(s) 309
PsiI TTATAA 1 cut(s) 558
Psp6I CCWGG 4 cut(s) 516, 569, 749, 1029
PspGI CCWGG 4 cut(s) 516, 569, 749, 1029
PspN4I GGNNCC 2 cut(s) 7, 796
PspPI GGNCC 2 cut(s) 672, 753
RsaI GTAC 5 cut(s) 458, 920, 1052, 1239, 1262
RsaNI GTAC 5 cut(s) 457, 919, 1051, 1238, 1261
RseI CAYNNNNRTG 1 cut(s) 219
SacII CCGCGG 1 cut(s) 835
SalI GTCGAC 1 cut(s) 598
SaqAI TTAA 2 cut(s) 309, 1040
SatI GCNGC 8 cut(s) 38, 41, 74, 402, 476, 585, 832, 992
Sau3AI GATC 5 cut(s) 16, 31, 211, 217, 847
Sau96I GGNCC 2 cut(s) 672, 753
ScaI AGTACT 1 cut(s) 458
SchI GAGTC 2 cut(s) 252, 530
ScrFI CCNGG 6 cut(s) 518, 571, 751, 939, 1031, 1231
SduI GDGCHC 3 cut(s) 133, 256, 814
SexAI ACCWGGT 1 cut(s) 1029
SfaNI GCATC 3 cut(s) 316, 1073, 1180
Sfr303I CCGCGG 1 cut(s) 835
SgrBI CCGCGG 1 cut(s) 835
SinI GGWCC 1 cut(s) 753
SmiMI CAYNNNNRTG 1 cut(s) 219
SmlI CTYRAG 1 cut(s) 1248
SmoI CTYRAG 1 cut(s) 1248
SpeI ACTAGT 1 cut(s) 1183
Sse9I AATT 2 cut(s) 66, 955
SseBI AGGCCT 1 cut(s) 880
SspI AATATT 1 cut(s) 424
SspMI CTAG 4 cut(s) 380, 432, 1115, 1184
StuI AGGCCT 1 cut(s) 880
StyD4I CCNGG 6 cut(s) 516, 569, 749, 937, 1029, 1229
StyI CCWWGG 2 cut(s) 122, 1114
TaaI ACNGT 2 cut(s) 365, 866
TaiI ACGT 2 cut(s) 300, 920
TaqI TCGA 2 cut(s) 599, 900
TasI AATT 2 cut(s) 66, 955
TatI WGTACW 3 cut(s) 456, 1237, 1260
TauI GCSGC 4 cut(s) 40, 478, 834, 994
TfiI GAWTC 3 cut(s) 641, 1103, 1156
Tru1I TTAA 2 cut(s) 309, 1040
Tru9I TTAA 2 cut(s) 309, 1040
TscAI CASTG 1 cut(s) 824
TseFI GTSAC 3 cut(s) 159, 463, 1125
TseI GCWGC 4 cut(s) 40, 73, 401, 584
Tsp45I GTSAC 3 cut(s) 159, 463, 1125
TspDTI ATGAA 4 cut(s) 36, 506, 569, 1058
TspGWI ACGGA 2 cut(s) 280, 1280
TspRI CASTG 1 cut(s) 824
Van91I CCANNNNNTGG 2 cut(s) 356, 741
VpaK11BI GGWCC 1 cut(s) 753
VspI ATTAAT 1 cut(s) 309
XapI RAATTY 2 cut(s) 66, 955
XmaJI CCTAGG 1 cut(s) 1114
XmiI GTMKAC 1 cut(s) 599
XspI CTAG 4 cut(s) 380, 432, 1115, 1184
ZrmI AGTACT 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.