Rroxscaffold_1G00020110

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000113
Physical Location & Seq
Reverse (-)
24493293 .. 24494441
1149 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00020110.1

Sequence Viewer

Length: 1149 bp
ATGGCAGAGGACGGCGGCGGCCGTAAGCGAGCTCCCACCGAGTTCCACGACGGCGACATCATTTCAGAGATTCTGGCGAGGCTACCGGTCAAATCTCTGATGCGATTCCGGTGCGTATCCAAGTCGTGGAGTGCTCTGATCTCCGATCCTTACTTCACAAAGAAGCACTTAAGCTACACAGAAATGGGCATCACTGAGAACAGCTCCAGGCTCCTTTATTCACTGGACCCTCCACAATCCCTAGACCACGAAGCATTGAAGGATTTGAAGGATCATAGGGATGGTTATTTTGCCAACAGAGAGCTTGATCTGCCGGTAATGATCCCGGGCTTATCCAATCGTTATAAAAGGATCGTTGGTTGTTGCAATGGGTTAATATGTATTTTAGTTCAACAAGTCGACTTTATGTTATGGAATCCATGTACTAGATACTCCAACGTGTTACCAAGAACAAAATTCCATTCCTATTTTCCAAAATTTAATAGTCAGAGCGTGTTTTGTGGGTTCGGTTATGATTCTGCTACCGATGATTACAAGGTAATAATGGGGACTAGAAACTGCAAACAAATTCAGATTTTCACTCTAAAAACGAGTTCATGGAAGGTGCTCCCCTTAACCAATGCTCTTAACTTGTCAGGTCATCAGGGGTTGTTATTGAATGGATCTTTGCACTGGTTGGCTGAACCCGAGCCAAATGCAGGGAATTGCGAAACAATATTGTCTTTTGATTTGGTGGAGGAGAAGTTTCGTGAGATGATTCCATTACCCCATCATGATGCTTACTTTCAGGGTATGACGATTCTTAGAAATTATCTGTGTGTGTTTGAAGTCTTAGTTGGCCGGGATGGTGTTAACACAATATGGTTGATGAAGGAGTATGGGGTGAAGCAATCTTGGACTCAAGTTATAAGGTATTCTAAAAACGTTATGCCTGAAGAGTACAGACATGTGTTCATGCAGCCTATTTGTATTCTAGAGAATGGAGAACTTTTGGTTAATGATTGGCGTACAGGTTTCTTGGTGTTATATGATCCAAAGGAAAATACATTCAAGAATGTTAACAAGACTCATGATCAATTGCGTTATGGAGCTTTAGTTTACAGAGAGACTTTAGTTTCACCAGTAACCGGCAGTGTTGTAGACATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

382

Amino Acids

43.92

Weight (kDa)

7.14

Isoelectric Point (pI)

32.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 54 1.6e-09 F-box domain
FBA_3 PF08268 109 - 354 3.9e-27 F-box associated beta propeller domain
FBA_1 PF07734 119 - 334 8.9e-27 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 345, 908
AccB7I CCANNNNNTGG 1 cut(s) 126
AccI GTMKAC 2 cut(s) 399, 1140
AciI CCGC 2 cut(s) 15, 18
AclI AACGTT 1 cut(s) 924
AclWI GGATC 6 cut(s) 140, 279, 316, 359, 670, 1025
AcoI YGGCCR 2 cut(s) 19, 838
AcsI RAATTY 3 cut(s) 455, 476, 567
AcuI CTGAAG 1 cut(s) 954
AfaI GTAC 3 cut(s) 424, 941, 1009
AfiI CCNNNNNNNGG 3 cut(s) 126, 698, 1127
AflII CTTAAG 1 cut(s) 169
AflIII ACRYGT 2 cut(s) 438, 946
AgeI ACCGGT 1 cut(s) 85
AgsI TTSAA 6 cut(s) 259, 268, 392, 658, 827, 1051
AjnI CCWGG 1 cut(s) 206
AjuI GAANNNNNNNTTGG 2 cut(s) 819, 851
AluBI AGCT 5 cut(s) 32, 174, 204, 304, 1091
AluI AGCT 5 cut(s) 32, 174, 204, 304, 1091
Alw21I GWGCWC 3 cut(s) 34, 136, 609
Alw26I GTCTC 1 cut(s) 1100
AlwI GGATC 6 cut(s) 140, 279, 316, 359, 670, 1025
Ama87I CYCGRG 2 cut(s) 325, 686
AoxI GGCC 2 cut(s) 19, 838
ApeKI GCWGC 1 cut(s) 958
ApoI RAATTY 3 cut(s) 455, 476, 567
AsiGI ACCGGT 1 cut(s) 85
AspS9I GGNCC 1 cut(s) 226
AsuC2I CCSGG 3 cut(s) 326, 327, 842
AsuHPI GGTGA 2 cut(s) 895, 1110
AvaI CYCGRG 2 cut(s) 325, 686
AvaII GGWCC 1 cut(s) 226
BanII GRGCYC 1 cut(s) 34
Bbv12I GWGCWC 3 cut(s) 34, 136, 609
BbvI GCAGC 1 cut(s) 970
BccI CCATC 3 cut(s) 275, 777, 839
BceAI ACGGC 3 cut(s) 6, 28, 67
BcgI CGANNNNNNTGC 4 cut(s) 93, 127, 677, 711
BciT130I CCWGG 1 cut(s) 208
BciVI GTATCC 1 cut(s) 127
BclI TGATCA 1 cut(s) 1072
BcnI CCSGG 3 cut(s) 326, 327, 842
BcoDI GTCTC 1 cut(s) 1100
BfaI CTAG 4 cut(s) 242, 426, 552, 974
BfrI CTTAAG 1 cut(s) 169
BfuI GTATCC 1 cut(s) 127
BisI GCNGC 3 cut(s) 16, 19, 959
BlsI GCNGC 3 cut(s) 17, 20, 960
Bme1390I CCNGG 4 cut(s) 208, 326, 327, 842
Bme18I GGWCC 1 cut(s) 226
BmeT110I CYCGRG 2 cut(s) 325, 686
BmgT120I GGNCC 1 cut(s) 226
BmiI GGNNCC 2 cut(s) 212, 228
BmrFI CCNGG 4 cut(s) 208, 326, 327, 842
BmsI GCATC 3 cut(s) 90, 198, 766
BplI GAGNNNNNCTC 2 cut(s) 188, 220
BpmI CTGGAG 1 cut(s) 190
BpuEI CTTGAG 1 cut(s) 885
BpuMI CCSGG 3 cut(s) 326, 327, 842
BsaJI CCNNGG 1 cut(s) 325
BsaWI WCCGGW 2 cut(s) 85, 108
BsaXI ACNNNNNCTCC 4 cut(s) 728, 758, 1080, 1110
Bsc4I CCNNNNNNNGG 3 cut(s) 126, 698, 1127
Bse118I RCCGGY 3 cut(s) 85, 313, 1127
Bse1I ACTGG 3 cut(s) 228, 677, 1121
Bse3DI GCAATG 1 cut(s) 373
BseBI CCWGG 1 cut(s) 208
BseDI CCNNGG 1 cut(s) 325
BseGI GGATG 2 cut(s) 286, 850
BseLI CCNNNNNNNGG 3 cut(s) 126, 698, 1127
BseMI GCAATG 1 cut(s) 373
BseMII CTCAG 1 cut(s) 186
BseNI ACTGG 3 cut(s) 228, 677, 1121
BseRI GAGGAG 1 cut(s) 752
BseX3I CGGCCG 1 cut(s) 19
BseXI GCAGC 1 cut(s) 970
Bsh1285I CGRYCG 1 cut(s) 22
BshFI GGCC 2 cut(s) 21, 840
BshTI ACCGGT 1 cut(s) 85
BsiEI CGRYCG 1 cut(s) 22
BsiHKAI GWGCWC 3 cut(s) 34, 136, 609
BsiHKCI CYCGRG 2 cut(s) 325, 686
BsiSI CCGG 6 cut(s) 86, 109, 314, 326, 841, 1128
BslFI GGGAC 1 cut(s) 562
BslI CCNNNNNNNGG 3 cut(s) 126, 698, 1127
BsmAI GTCTC 1 cut(s) 1100
BsmFI GGGAC 1 cut(s) 562
BsnI GGCC 2 cut(s) 21, 840
BsoBI CYCGRG 2 cut(s) 325, 686
Bsp1286I GDGCHC 3 cut(s) 34, 136, 609
Bsp143I GATC 9 cut(s) 138, 145, 271, 307, 321, 351, 662, 1030, 1072
BspACI CCGC 2 cut(s) 15, 18
BspANI GGCC 2 cut(s) 21, 840
BspCNI CTCAG 1 cut(s) 187
BspHI TCATGA 2 cut(s) 772, 1069
BspLI GGNNCC 2 cut(s) 212, 228
BspPI GGATC 6 cut(s) 140, 279, 316, 359, 670, 1025
BspTI CTTAAG 1 cut(s) 169
BsrDI GCAATG 1 cut(s) 373
BsrFI RCCGGY 3 cut(s) 85, 313, 1127
BsrI ACTGG 3 cut(s) 228, 677, 1121
BssAI RCCGGY 3 cut(s) 85, 313, 1127
BssECI CCNNGG 1 cut(s) 325
BssMI GATC 9 cut(s) 138, 145, 271, 307, 321, 351, 662, 1030, 1072
Bst2UI CCWGG 1 cut(s) 208
Bst6I CTCTTC 1 cut(s) 930
BstAFI CTTAAG 1 cut(s) 169
BstC8I GCNNGC 1 cut(s) 30
BstDEI CTNAG 3 cut(s) 195, 803, 832
BstF5I GGATG 2 cut(s) 286, 850
BstKTI GATC 9 cut(s) 141, 148, 274, 310, 324, 354, 665, 1033, 1075
BstMAI GTCTC 1 cut(s) 1100
BstMBI GATC 9 cut(s) 138, 145, 271, 307, 321, 351, 662, 1030, 1072
BstMCI CGRYCG 1 cut(s) 22
BstMWI GCNNNNNNNGC 1 cut(s) 310
BstNI CCWGG 1 cut(s) 208
BstNSI RCATGY 1 cut(s) 950
BstSCI CCNGG 4 cut(s) 206, 324, 325, 840
BstV1I GCAGC 1 cut(s) 970
BstX2I RGATCY 1 cut(s) 662
BstYI RGATCY 1 cut(s) 662
BstZI CGGCCG 1 cut(s) 19
BsuI GTATCC 1 cut(s) 127
BsuRI GGCC 2 cut(s) 21, 840
BtsCI GGATG 2 cut(s) 286, 850
BtsI GCAGTG 1 cut(s) 1138
BtsIMutI CAGTG 4 cut(s) 192, 221, 670, 1138
Cac8I GCNNGC 1 cut(s) 30
CciI TCATGA 2 cut(s) 772, 1069
Cfr10I RCCGGY 3 cut(s) 85, 313, 1127
Cfr13I GGNCC 1 cut(s) 226
Cfr9I CCCGGG 1 cut(s) 325
Csp6I GTAC 3 cut(s) 423, 940, 1008
CspAI ACCGGT 1 cut(s) 85
CviAII CATG 6 cut(s) 420, 597, 773, 947, 955, 1070
CviQI GTAC 3 cut(s) 423, 940, 1008
DdeI CTNAG 3 cut(s) 195, 803, 832
DpnI GATC 9 cut(s) 140, 147, 273, 309, 323, 353, 664, 1032, 1074
DpnII GATC 9 cut(s) 138, 145, 271, 307, 321, 351, 662, 1030, 1072
EaeI YGGCCR 2 cut(s) 19, 838
EagI CGGCCG 1 cut(s) 19
Eam1104I CTCTTC 1 cut(s) 930
EarI CTCTTC 1 cut(s) 930
Ecl136II GAGCTC 1 cut(s) 32
EclXI CGGCCG 1 cut(s) 19
Eco24I GRGCYC 1 cut(s) 34
Eco47I GGWCC 1 cut(s) 226
Eco52I CGGCCG 1 cut(s) 19
Eco53kI GAGCTC 1 cut(s) 32
Eco57I CTGAAG 1 cut(s) 954
Eco88I CYCGRG 2 cut(s) 325, 686
EcoICRI GAGCTC 1 cut(s) 32
EcoRII CCWGG 1 cut(s) 206
EcoT38I GRGCYC 1 cut(s) 34
FaeI CATG 6 cut(s) 423, 600, 776, 950, 958, 1073
FalI AAGNNNNNCTT 2 cut(s) 152, 184
FaqI GGGAC 1 cut(s) 562
FatI CATG 6 cut(s) 419, 596, 772, 946, 954, 1069
FbaI TGATCA 1 cut(s) 1072
FblI GTMKAC 2 cut(s) 399, 1140
Fnu4HI GCNGC 3 cut(s) 16, 19, 959
FokI GGATG 2 cut(s) 293, 857
FriOI GRGCYC 1 cut(s) 34
Fsp4HI GCNGC 3 cut(s) 16, 19, 959
FspBI CTAG 4 cut(s) 242, 426, 552, 974
GluI GCNGC 3 cut(s) 16, 19, 959
GsuI CTGGAG 1 cut(s) 190
HaeIII GGCC 2 cut(s) 21, 840
HapII CCGG 6 cut(s) 86, 109, 314, 326, 841, 1128
Hin1II CATG 6 cut(s) 423, 600, 776, 950, 958, 1073
HincII GTYRAC 3 cut(s) 400, 853, 1060
HindII GTYRAC 3 cut(s) 400, 853, 1060
HinfI GANTC 8 cut(s) 70, 105, 415, 515, 757, 799, 898, 1066
HpaI GTTAAC 2 cut(s) 853, 1060
HpaII CCGG 6 cut(s) 86, 109, 314, 326, 841, 1128
HphI GGTGA 2 cut(s) 895, 1110
Hpy166II GTNNAC 5 cut(s) 400, 853, 1060, 1099, 1141
Hpy188I TCNGA 7 cut(s) 67, 99, 138, 145, 489, 573, 1148
Hpy188III TCNNGA 5 cut(s) 749, 773, 974, 1051, 1070
Hpy8I GTNNAC 5 cut(s) 400, 853, 1060, 1099, 1141
Hpy99I CGWCG 1 cut(s) 53
HpyAV CCTTC 4 cut(s) 253, 262, 595, 865
HpyCH4IV ACGT 2 cut(s) 438, 924
HpyCH4V TGCA 5 cut(s) 366, 561, 670, 698, 958
HpyF10VI GCNNNNNNNGC 1 cut(s) 310
HpyF3I CTNAG 3 cut(s) 195, 803, 832
HpySE526I ACGT 2 cut(s) 438, 924
Hsp92II CATG 6 cut(s) 423, 600, 776, 950, 958, 1073
Ksp22I TGATCA 1 cut(s) 1072
KspAI GTTAAC 2 cut(s) 853, 1060
Kzo9I GATC 9 cut(s) 138, 145, 271, 307, 321, 351, 662, 1030, 1072
LmnI GCTCC 5 cut(s) 37, 209, 216, 612, 1088
Lsp1109I GCAGC 1 cut(s) 970
LweI GCATC 3 cut(s) 90, 198, 766
MaeI CTAG 4 cut(s) 242, 426, 552, 974
MaeII ACGT 2 cut(s) 438, 924
MaeIII GTNAC 2 cut(s) 441, 1123
MalI GATC 9 cut(s) 140, 147, 273, 309, 323, 353, 664, 1032, 1074
MboI GATC 9 cut(s) 138, 145, 271, 307, 321, 351, 662, 1030, 1072
MboII GAAGA 1 cut(s) 947
MfeI CAATTG 1 cut(s) 1076
MflI RGATCY 1 cut(s) 662
MhlI GDGCHC 3 cut(s) 34, 136, 609
MluCI AATT 6 cut(s) 455, 476, 567, 703, 808, 1076
MlyI GAGTC 2 cut(s) 892, 1060
MmeI TCCRAC 1 cut(s) 459
MnlI CCTC 3 cut(s) 72, 240, 730
MseI TTAA 8 cut(s) 170, 374, 480, 614, 627, 852, 996, 1059
MslI CAYNNNNRTG 3 cut(s) 182, 279, 774
MspCI CTTAAG 1 cut(s) 169
MspI CCGG 6 cut(s) 86, 109, 314, 326, 841, 1128
MspR9I CCNGG 4 cut(s) 208, 326, 327, 842
MunI CAATTG 1 cut(s) 1076
MvaI CCWGG 1 cut(s) 208
MwoI GCNNNNNNNGC 1 cut(s) 310
NciI CCSGG 3 cut(s) 326, 327, 842
NdeII GATC 9 cut(s) 138, 145, 271, 307, 321, 351, 662, 1030, 1072
NlaIII CATG 6 cut(s) 423, 600, 776, 950, 958, 1073
NlaIV GGNNCC 2 cut(s) 212, 228
NspI RCATGY 1 cut(s) 950
PagI TCATGA 2 cut(s) 772, 1069
PciI ACATGT 1 cut(s) 946
PfeI GAWTC 6 cut(s) 70, 105, 415, 515, 757, 799
PflMI CCANNNNNTGG 1 cut(s) 126
PinAI ACCGGT 1 cut(s) 85
PkrI GCNGC 3 cut(s) 17, 20, 960
PleI GAGTC 2 cut(s) 892, 1060
PpsI GAGTC 2 cut(s) 892, 1060
PscI ACATGT 1 cut(s) 946
PsiI TTATAA 2 cut(s) 345, 908
Psp124BI GAGCTC 1 cut(s) 34
Psp1406I AACGTT 1 cut(s) 924
Psp6I CCWGG 1 cut(s) 206
PspGI CCWGG 1 cut(s) 206
PspN4I GGNNCC 2 cut(s) 212, 228
PspPI GGNCC 1 cut(s) 226
PsuI RGATCY 1 cut(s) 662
RsaI GTAC 3 cut(s) 424, 941, 1009
RsaNI GTAC 3 cut(s) 423, 940, 1008
RseI CAYNNNNRTG 3 cut(s) 182, 279, 774
SacI GAGCTC 1 cut(s) 34
SalI GTCGAC 1 cut(s) 398
SaqAI TTAA 8 cut(s) 170, 374, 480, 614, 627, 852, 996, 1059
SatI GCNGC 3 cut(s) 16, 19, 959
Sau3AI GATC 9 cut(s) 138, 145, 271, 307, 321, 351, 662, 1030, 1072
Sau96I GGNCC 1 cut(s) 226
SchI GAGTC 2 cut(s) 892, 1060
ScrFI CCNGG 4 cut(s) 208, 326, 327, 842
SduI GDGCHC 3 cut(s) 34, 136, 609
SfaNI GCATC 3 cut(s) 90, 198, 766
SinI GGWCC 1 cut(s) 226
SmaI CCCGGG 1 cut(s) 327
SmiMI CAYNNNNRTG 3 cut(s) 182, 279, 774
SmlI CTYRAG 2 cut(s) 169, 900
SmoI CTYRAG 2 cut(s) 169, 900
Sse9I AATT 6 cut(s) 455, 476, 567, 703, 808, 1076
SsiI CCGC 2 cut(s) 15, 18
SspI AATATT 1 cut(s) 717
SspMI CTAG 4 cut(s) 242, 426, 552, 974
SstI GAGCTC 1 cut(s) 34
StyD4I CCNGG 4 cut(s) 206, 324, 325, 840
TaiI ACGT 2 cut(s) 441, 927
TaqI TCGA 1 cut(s) 399
TasI AATT 6 cut(s) 455, 476, 567, 703, 808, 1076
TatI WGTACW 2 cut(s) 422, 939
TauI GCSGC 2 cut(s) 18, 21
TfiI GAWTC 6 cut(s) 70, 105, 415, 515, 757, 799
Tru1I TTAA 8 cut(s) 170, 374, 480, 614, 627, 852, 996, 1059
Tru9I TTAA 8 cut(s) 170, 374, 480, 614, 627, 852, 996, 1059
TscAI CASTG 4 cut(s) 199, 228, 677, 1138
TseI GCWGC 1 cut(s) 958
TspDTI ATGAA 3 cut(s) 585, 884, 943
TspMI CCCGGG 1 cut(s) 325
TspRI CASTG 4 cut(s) 199, 228, 677, 1138
Van91I CCANNNNNTGG 1 cut(s) 126
Vha464I CTTAAG 1 cut(s) 169
VpaK11BI GGWCC 1 cut(s) 226
XapI RAATTY 3 cut(s) 455, 476, 567
XbaI TCTAGA 1 cut(s) 973
XceI RCATGY 1 cut(s) 950
XmaI CCCGGG 1 cut(s) 325
XmiI GTMKAC 2 cut(s) 399, 1140
XspI CTAG 4 cut(s) 242, 426, 552, 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.