Rorug01G0185900

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000113
Physical Location & Seq
Forward (+)
25757437 .. 25764223
6787 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0185900.1

Sequence Viewer

Length: 1845 bp
ATGCAAGCCAGCCCCTTTCAAGTCATTCCCAAACCAATATTTCCCTCACCGATAAACATACCTCCTGTGCACCGACGTCCTCCCTCGCAACGAGTTCGTGCCATCACTACTTCCACAGCCAATGAAACCCATACTCCAATTACCATGTCAACTCTAGAAGTGGTCGATGCCTCCGTGGGCGACTTCTGGGACTACCAGTTCCTCTTCGTCTCACAACGCTTGGAAACAAACGAGCCCGTGACTCTACAAGTCGTCGAAGGTGCGGTCCCGATGGAGTTTCCTTCCGGAACATACTACTTGGCGGGACCGGGGATCTTCAGGGATGACCACGGTTCGACAATGCACCCTTTAGACGGTCACGGCTACCTCAGGGCTTTTACTTTCGATGGGGTTAATGGGGATAAGTTCAGTGTCAAGTTCATGGCGAGGTACGTGAATACTGAGGCAAAGGTGGAAGAGCACGACCCGGTGACCAACACGTGGCGGTTCCGACATAGGGGGTTGTTCTCGATGCTGAAGAGAGGAGAGAAAGTTTGGAACACCAAGGTGATGAAAAATGTGGCGAATACTAGTGTGGTGAGCTGGGGTGGGAGACTGTTGTGCTTGTGGGATGGCGGGGAACCATACGAAATTGAACCGGAGAGGTTGGATACGATCGGGAAGGTCAAGCTGATGGATGGTTGGGATTCAGTGGTGGAGAGGAGAAGCGATGGTGGTGATGTATGGGATGTTGCAGCAAGGTTGCTGAAGCCGATTTTGTACGGAGTGTTTAAGATGCCAGTGAAGCGATTATTAGCTCATTATAAGTTCGATGCTCGCAGAAATAGACTTCTTTTAATGTCTTGTAATGCAGAAGATATTTTTTTACCGCGCAACAATTTTACATTTTATGAATTTGATTCAAATTTTAAGGTGGTTGGAAAGAAAGAATTCATCATCCCTGATCACTTGATGATTCATGATTGGGCTTTCACAGCCACTAGTTATATACTATTTGCTAATCGTGTCAAGCTTGAATTCACCGGTGCAATGACTTCATTTTGTGGAATTACTCCAACAATTGCAGCATTATCAGTGAACCCTAGCAAGGAAACTTCTCCCATATATGTGCTTCCTCGGTTTCCTAATGAAGTGAATTATAATCGAGATTGGAGAGTGCCTGTTGAAGCTCCTTCACAATTTTGGCTGCTACATGTAGGCAATGCCTATGAGAGTTTGGATGAAAATGGGAATTCGGAGATCCAAATACAAGCTTCTGTTTGCTCTTACGAGTGGTTCACATTACATAAATTACTTGGATATGATTGGCAAAGTGGTAAACTGGACCCTTCGATTATGTACTTAAATGGAAACAAAAGCAAGAAAATGCCTCACCTTGTCCAGGTTTCCATCAACTTGGATACCGATGGGATCTGTCAAAGATGTGATATTGAGCCATTAAACCAATGGATCAAGTCATCAGATTTTCCCGTCATAAATCCAGCATTTTCAGGCAGCAAGAATAAATACATATATGCAGCAGCTTTTTCAGGTTCTCGCAGGGCATTGCCAAACTTTCCATATGACATGGTGGTGAAGCTCAATCTTTCAACTAAATCTGTGCGCACATGGTCTGCTGATAGTCGAAGATTTATCGGCGAACCCACTTTCATAGCCAAAGGTTCCGAAGAAGATGAGGGTTACATTCTTGTGGTTGAGTATGCAGTTGCAGTTCAAAGGTGCTATCTGGTTATCTTGGATTCAAAGAGGATTGGAGCGGCTGATGCACTTGTGGCAAGACTTGAAGTCCCCAAACACCTAAATTTTCCTCTTGGTTTTCATGGTTTCTGGGCCAGTAACGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

614

Amino Acids

69.75

Weight (kDa)

6.96

Isoelectric Point (pI)

40.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPE65 PF03055 70 - 611 7.9e-88 Retinal pigment epithelial membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 804, 1140
AatII GACGTC 1 cut(s) 79
Acc16I TGCGCA 1 cut(s) 1604
AccB7I CCANNNNNTGG 1 cut(s) 480
AccBSI CCGCTC 1 cut(s) 1757
AccII CGCG 1 cut(s) 871
AccIII TCCGGA 1 cut(s) 284
AciI CCGC 6 cut(s) 263, 302, 484, 615, 869, 1757
AclWI GGATC 4 cut(s) 320, 1234, 1418, 1457
AcsI RAATTY 6 cut(s) 893, 904, 929, 1016, 1231, 1801
AcuI CTGAAG 3 cut(s) 301, 536, 767
AcvI CACGTG 1 cut(s) 480
AcyI GRCGYC 1 cut(s) 76
AfaI GTAC 3 cut(s) 431, 761, 1340
AfiI CCNNNNNNNGG 5 cut(s) 353, 480, 496, 1087, 1381
AflIII ACRYGT 2 cut(s) 477, 1192
AgeI ACCGGT 1 cut(s) 1022
AgsI TTSAA 9 cut(s) 20, 635, 903, 1016, 1166, 1590, 1715, 1743, 1784
AhdI GACNNNNNGTC 1 cut(s) 1784
AhlI ACTAGT 2 cut(s) 569, 980
AjnI CCWGG 1 cut(s) 1380
AleI CACNNNNGTG 1 cut(s) 545
AloI GAACNNNNNNTCC 2 cut(s) 182, 214
AluBI AGCT 8 cut(s) 582, 670, 797, 1012, 1169, 1253, 1523, 1579
AluI AGCT 8 cut(s) 582, 670, 797, 1012, 1169, 1253, 1523, 1579
Alw21I GWGCWC 2 cut(s) 72, 462
Alw26I GTCTC 2 cut(s) 214, 586
Alw44I GTGCAC 1 cut(s) 68
AlwI GGATC 4 cut(s) 320, 1234, 1418, 1457
Aor13HI TCCGGA 1 cut(s) 284
AoxI GGCC 1 cut(s) 1830
ApaLI GTGCAC 1 cut(s) 68
ApeKI GCWGC 6 cut(s) 734, 1064, 1186, 1494, 1517, 1520
ApoI RAATTY 6 cut(s) 893, 904, 929, 1016, 1231, 1801
ArsI GACNNNNNNTTYG 2 cut(s) 249, 281
AsiGI ACCGGT 1 cut(s) 1022
Asp700I GAANNNNTTC 1 cut(s) 929
AspLEI GCGC 2 cut(s) 873, 1605
AspS9I GGNCC 4 cut(s) 265, 305, 1324, 1830
AsuC2I CCSGG 2 cut(s) 309, 467
AsuHPI GGTGA 8 cut(s) 39, 481, 559, 589, 728, 1012, 1364, 1585
AvaII GGWCC 3 cut(s) 265, 305, 1324
AxyI CCTNAGG 1 cut(s) 368
BaeGI GKGCMC 1 cut(s) 72
BanII GRGCYC 1 cut(s) 237
BbrPI CACGTG 1 cut(s) 480
Bbv12I GWGCWC 2 cut(s) 72, 462
BbvI GCAGC 6 cut(s) 746, 1076, 1173, 1506, 1529, 1532
BccI CCATC 9 cut(s) 110, 265, 380, 605, 667, 671, 704, 1397, 1400
BceAI ACGGC 1 cut(s) 376
BcgI CGANNNNNNTGC 2 cut(s) 77, 111
BciT130I CCWGG 1 cut(s) 1382
BciVI GTATCC 2 cut(s) 643, 1393
BclI TGATCA 1 cut(s) 943
BcnI CCSGG 2 cut(s) 309, 467
BcoDI GTCTC 2 cut(s) 214, 586
BcuI ACTAGT 2 cut(s) 569, 980
BfaI CTAG 4 cut(s) 155, 570, 981, 1083
BfuI GTATCC 2 cut(s) 643, 1393
BisI GCNGC 7 cut(s) 735, 1065, 1187, 1495, 1518, 1521, 1758
BlsI GCNGC 7 cut(s) 736, 1066, 1188, 1496, 1519, 1522, 1759
Bme1390I CCNGG 3 cut(s) 309, 467, 1382
Bme18I GGWCC 3 cut(s) 265, 305, 1324
BmeRI GACNNNNNGTC 1 cut(s) 1784
BmgT120I GGNCC 4 cut(s) 265, 305, 1324, 1830
BmiI GGNNCC 6 cut(s) 267, 306, 488, 621, 1326, 1663
BmrFI CCNGG 3 cut(s) 309, 467, 1382
BmsI GCATC 5 cut(s) 157, 501, 765, 802, 1753
BpuMI CCSGG 2 cut(s) 309, 467
BsaAI YACGTR 2 cut(s) 433, 480
BsaHI GRCGYC 1 cut(s) 76
BsaJI CCNNGG 5 cut(s) 174, 308, 328, 543, 1115
BsaWI WCCGGW 3 cut(s) 284, 637, 1022
BsaXI ACNNNNNCTCC 4 cut(s) 118, 148, 516, 546
Bsc4I CCNNNNNNNGG 5 cut(s) 353, 480, 496, 1087, 1381
Bse118I RCCGGY 1 cut(s) 1022
Bse1I ACTGG 4 cut(s) 196, 779, 1326, 1833
Bse21I CCTNAGG 1 cut(s) 368
Bse3DI GCAATG 3 cut(s) 1035, 1207, 1544
BseAI TCCGGA 1 cut(s) 284
BseBI CCWGG 1 cut(s) 1382
BseDI CCNNGG 5 cut(s) 174, 308, 328, 543, 1115
BseGI GGATG 6 cut(s) 328, 616, 682, 733, 936, 1225
BseLI CCNNNNNNNGG 5 cut(s) 353, 480, 496, 1087, 1381
BseMI GCAATG 3 cut(s) 1035, 1207, 1544
BseMII CTCAG 2 cut(s) 382, 432
BseNI ACTGG 4 cut(s) 196, 779, 1326, 1833
BseRI GAGGAG 2 cut(s) 537, 715
BseSI GKGCMC 1 cut(s) 72
BseXI GCAGC 6 cut(s) 746, 1076, 1173, 1506, 1529, 1532
BseYI CCCAGC 1 cut(s) 582
Bsh1236I CGCG 1 cut(s) 871
Bsh1285I CGRYCG 1 cut(s) 657
BshFI GGCC 1 cut(s) 1832
BshTI ACCGGT 1 cut(s) 1022
BsiEI CGRYCG 1 cut(s) 657
BsiHKAI GWGCWC 2 cut(s) 72, 462
BsiSI CCGG 5 cut(s) 285, 308, 467, 638, 1023
BslFI GGGAC 4 cut(s) 203, 251, 318, 1772
BslI CCNNNNNNNGG 5 cut(s) 353, 480, 496, 1087, 1381
BsmAI GTCTC 2 cut(s) 214, 586
BsmBI CGTCTC 1 cut(s) 214
BsmFI GGGAC 4 cut(s) 203, 251, 318, 1772
BsnI GGCC 1 cut(s) 1832
Bsp1286I GDGCHC 3 cut(s) 72, 237, 462
Bsp13I TCCGGA 1 cut(s) 284
Bsp143I GATC 6 cut(s) 312, 654, 943, 1239, 1410, 1449
BspACI CCGC 6 cut(s) 263, 302, 484, 615, 869, 1757
BspANI GGCC 1 cut(s) 1832
BspCNI CTCAG 2 cut(s) 381, 433
BspEI TCCGGA 1 cut(s) 284
BspFNI CGCG 1 cut(s) 871
BspHI TCATGA 1 cut(s) 958
BspLI GGNNCC 6 cut(s) 267, 306, 488, 621, 1326, 1663
BspPI GGATC 4 cut(s) 320, 1234, 1418, 1457
BspQI GCTCTTC 1 cut(s) 450
BsrBI CCGCTC 1 cut(s) 1757
BsrDI GCAATG 3 cut(s) 1035, 1207, 1544
BsrFI RCCGGY 1 cut(s) 1022
BsrI ACTGG 4 cut(s) 196, 779, 1326, 1833
BssAI RCCGGY 1 cut(s) 1022
BssECI CCNNGG 5 cut(s) 174, 308, 328, 543, 1115
BssMI GATC 6 cut(s) 312, 654, 943, 1239, 1410, 1449
BssNI GRCGYC 1 cut(s) 76
BssT1I CCWWGG 1 cut(s) 543
Bst2UI CCWGG 1 cut(s) 1382
Bst4CI ACNGT 3 cut(s) 332, 356, 597
Bst6I CTCTTC 3 cut(s) 209, 450, 512
BstACI GRCGYC 1 cut(s) 76
BstBAI YACGTR 2 cut(s) 433, 480
BstC8I GCNNGC 3 cut(s) 6, 10, 817
BstDEI CTNAG 2 cut(s) 368, 441
BstDSI CCRYGG 2 cut(s) 174, 328
BstEII GGTNACC 1 cut(s) 469
BstENI CCTNNNNNAGG 1 cut(s) 1379
BstF5I GGATG 6 cut(s) 328, 616, 682, 733, 936, 1225
BstFNI CGCG 1 cut(s) 871
BstHHI GCGC 2 cut(s) 873, 1605
BstKTI GATC 6 cut(s) 315, 657, 946, 1242, 1413, 1452
BstMAI GTCTC 2 cut(s) 214, 586
BstMBI GATC 6 cut(s) 312, 654, 943, 1239, 1410, 1449
BstMCI CGRYCG 1 cut(s) 657
BstMWI GCNNNNNNNGC 4 cut(s) 784, 974, 1763, 1772
BstNI CCWGG 1 cut(s) 1382
BstNSI RCATGY 1 cut(s) 1196
BstPI GGTNACC 1 cut(s) 469
BstSCI CCNGG 3 cut(s) 307, 465, 1380
BstSLI GKGCMC 1 cut(s) 72
BstUI CGCG 1 cut(s) 871
BstV1I GCAGC 6 cut(s) 746, 1076, 1173, 1506, 1529, 1532
BstX2I RGATCY 3 cut(s) 312, 1239, 1410
BstXI CCANNNNNNTGG 1 cut(s) 1396
BstYI RGATCY 3 cut(s) 312, 1239, 1410
Bsu36I CCTNAGG 1 cut(s) 368
BsuI GTATCC 2 cut(s) 643, 1393
BsuRI GGCC 1 cut(s) 1832
BtgI CCRYGG 2 cut(s) 174, 328
BtgZI GCGATG 1 cut(s) 723
BtsCI GGATG 6 cut(s) 328, 616, 682, 733, 936, 1225
BtsIMutI CAGTG 4 cut(s) 415, 696, 786, 1080
Cac8I GCNNGC 3 cut(s) 6, 10, 817
CciI TCATGA 1 cut(s) 958
CfoI GCGC 2 cut(s) 873, 1605
Cfr10I RCCGGY 1 cut(s) 1022
Cfr13I GGNCC 4 cut(s) 265, 305, 1324, 1830
Csp6I GTAC 3 cut(s) 430, 760, 1339
CspAI ACCGGT 1 cut(s) 1022
CviAII CATG 7 cut(s) 145, 421, 959, 1193, 1567, 1608, 1820
CviQI GTAC 3 cut(s) 430, 760, 1339
DdeI CTNAG 2 cut(s) 368, 441
DpnI GATC 6 cut(s) 314, 656, 945, 1241, 1412, 1451
DpnII GATC 6 cut(s) 312, 654, 943, 1239, 1410, 1449
DriI GACNNNNNGTC 1 cut(s) 1784
Eam1104I CTCTTC 3 cut(s) 209, 450, 512
Eam1105I GACNNNNNGTC 1 cut(s) 1784
EarI CTCTTC 3 cut(s) 209, 450, 512
Eco130I CCWWGG 1 cut(s) 543
Eco24I GRGCYC 1 cut(s) 237
Eco47I GGWCC 3 cut(s) 265, 305, 1324
Eco57I CTGAAG 3 cut(s) 301, 536, 767
Eco72I CACGTG 1 cut(s) 480
Eco81I CCTNAGG 1 cut(s) 368
Eco91I GGTNACC 1 cut(s) 469
EcoNI CCTNNNNNAGG 1 cut(s) 1379
EcoO65I GGTNACC 1 cut(s) 469
EcoRI GAATTC 3 cut(s) 929, 1016, 1231
EcoRII CCWGG 1 cut(s) 1380
EcoT14I CCWWGG 1 cut(s) 543
EcoT38I GRGCYC 1 cut(s) 237
ErhI CCWWGG 1 cut(s) 543
Esp3I CGTCTC 1 cut(s) 214
FaeI CATG 7 cut(s) 148, 424, 962, 1196, 1570, 1611, 1823
FaqI GGGAC 4 cut(s) 203, 251, 318, 1772
FatI CATG 7 cut(s) 144, 420, 958, 1192, 1566, 1607, 1819
FauI CCCGC 2 cut(s) 295, 608
FauNDI CATATG 1 cut(s) 1561
FbaI TGATCA 1 cut(s) 943
Fnu4HI GCNGC 7 cut(s) 735, 1065, 1187, 1495, 1518, 1521, 1758
FokI GGATG 6 cut(s) 335, 623, 689, 740, 923, 1232
FriOI GRGCYC 1 cut(s) 237
Fsp4HI GCNGC 7 cut(s) 735, 1065, 1187, 1495, 1518, 1521, 1758
FspAI RTGCGCAY 1 cut(s) 1604
FspBI CTAG 4 cut(s) 155, 570, 981, 1083
FspI TGCGCA 1 cut(s) 1604
GlaI GCGC 2 cut(s) 872, 1604
GluI GCNGC 7 cut(s) 735, 1065, 1187, 1495, 1518, 1521, 1758
GsaI CCCAGC 1 cut(s) 586
HaeIII GGCC 1 cut(s) 1832
HapII CCGG 5 cut(s) 285, 308, 467, 638, 1023
HhaI GCGC 2 cut(s) 873, 1605
Hin1I GRCGYC 1 cut(s) 76
Hin1II CATG 7 cut(s) 148, 424, 962, 1196, 1570, 1611, 1823
Hin6I GCGC 2 cut(s) 871, 1603
HinP1I GCGC 2 cut(s) 871, 1603
HincII GTYRAC 1 cut(s) 150
HindII GTYRAC 1 cut(s) 150
HindIII AAGCTT 2 cut(s) 1010, 1251
HinfI GANTC 5 cut(s) 241, 686, 899, 955, 1739
HpaII CCGG 5 cut(s) 285, 308, 467, 638, 1023
HphI GGTGA 8 cut(s) 39, 481, 559, 589, 728, 1012, 1364, 1585
Hpy166II GTNNAC 5 cut(s) 70, 150, 1078, 1278, 1319
Hpy188I TCNGA 4 cut(s) 491, 1237, 1462, 1666
Hpy188III TCNNGA 7 cut(s) 155, 268, 285, 508, 658, 959, 1145
Hpy8I GTNNAC 5 cut(s) 70, 150, 1078, 1278, 1319
Hpy99I CGWCG 2 cut(s) 78, 257
HpyAV CCTTC 5 cut(s) 251, 291, 655, 1182, 1338
HpyCH4III ACNGT 3 cut(s) 332, 356, 597
HpyCH4IV ACGT 3 cut(s) 76, 432, 479
HpyF10VI GCNNNNNNNGC 4 cut(s) 784, 974, 1763, 1772
HpyF3I CTNAG 2 cut(s) 368, 441
HpySE526I ACGT 3 cut(s) 76, 432, 479
Hsp92I GRCGYC 1 cut(s) 76
Hsp92II CATG 7 cut(s) 148, 424, 962, 1196, 1570, 1611, 1823
HspAI GCGC 2 cut(s) 871, 1603
Kpn2I TCCGGA 1 cut(s) 284
Ksp22I TGATCA 1 cut(s) 943
Kzo9I GATC 6 cut(s) 312, 654, 943, 1239, 1410, 1449
LguI GCTCTTC 1 cut(s) 450
LmnI GCTCC 2 cut(s) 1174, 1754
Lsp1109I GCAGC 6 cut(s) 746, 1076, 1173, 1506, 1529, 1532
LweI GCATC 5 cut(s) 157, 501, 765, 802, 1753
MaeI CTAG 4 cut(s) 155, 570, 981, 1083
MaeII ACGT 3 cut(s) 76, 432, 479
MaeIII GTNAC 5 cut(s) 238, 356, 469, 1679, 1835
MalI GATC 6 cut(s) 314, 656, 945, 1241, 1412, 1451
MbiI CCGCTC 1 cut(s) 1757
MboI GATC 6 cut(s) 312, 654, 943, 1239, 1410, 1449
MboII GAAGA 8 cut(s) 196, 307, 467, 529, 866, 1638, 1679, 1682
MfeI CAATTG 1 cut(s) 1059
MflI RGATCY 3 cut(s) 312, 1239, 1410
MhlI GDGCHC 3 cut(s) 72, 237, 462
MlyI GAGTC 1 cut(s) 235
MmeI TCCRAC 4 cut(s) 514, 627, 898, 1079
MroI TCCGGA 1 cut(s) 284
MroXI GAANNNNTTC 1 cut(s) 929
MseI TTAA 6 cut(s) 393, 771, 836, 909, 1343, 1439
MslI CAYNNNNRTG 4 cut(s) 545, 1106, 1571, 1688
MspI CCGG 5 cut(s) 285, 308, 467, 638, 1023
MspR9I CCNGG 3 cut(s) 309, 467, 1382
MunI CAATTG 1 cut(s) 1059
MvaI CCWGG 1 cut(s) 1382
MvnI CGCG 1 cut(s) 871
MwoI GCNNNNNNNGC 4 cut(s) 784, 974, 1763, 1772
NciI CCSGG 2 cut(s) 309, 467
NdeI CATATG 1 cut(s) 1561
NdeII GATC 6 cut(s) 312, 654, 943, 1239, 1410, 1449
NlaIII CATG 7 cut(s) 148, 424, 962, 1196, 1570, 1611, 1823
NlaIV GGNNCC 6 cut(s) 267, 306, 488, 621, 1326, 1663
NmuCI GTSAC 3 cut(s) 238, 356, 469
NsbI TGCGCA 1 cut(s) 1604
NspI RCATGY 1 cut(s) 1196
OliI CACNNNNGTG 1 cut(s) 545
PagI TCATGA 1 cut(s) 958
PciI ACATGT 1 cut(s) 1192
PciSI GCTCTTC 1 cut(s) 450
PcsI WCGNNNNNNNCGW 1 cut(s) 171
PdmI GAANNNNTTC 1 cut(s) 929
PfeI GAWTC 4 cut(s) 686, 899, 955, 1739
PflMI CCANNNNNTGG 1 cut(s) 480
PinAI ACCGGT 1 cut(s) 1022
PkrI GCNGC 7 cut(s) 736, 1066, 1188, 1496, 1519, 1522, 1759
Ple19I CGATCG 1 cut(s) 657
PleI GAGTC 1 cut(s) 235
PmaCI CACGTG 1 cut(s) 480
PmlI CACGTG 1 cut(s) 480
PpsI GAGTC 1 cut(s) 235
Ppu21I YACGTR 2 cut(s) 433, 480
PscI ACATGT 1 cut(s) 1192
PsiI TTATAA 2 cut(s) 804, 1140
Psp6I CCWGG 1 cut(s) 1380
PspCI CACGTG 1 cut(s) 480
PspEI GGTNACC 1 cut(s) 469
PspFI CCCAGC 1 cut(s) 582
PspGI CCWGG 1 cut(s) 1380
PspN4I GGNNCC 6 cut(s) 267, 306, 488, 621, 1326, 1663
PspPI GGNCC 4 cut(s) 265, 305, 1324, 1830
PsuI RGATCY 3 cut(s) 312, 1239, 1410
PvuI CGATCG 1 cut(s) 657
RsaI GTAC 3 cut(s) 431, 761, 1340
RsaNI GTAC 3 cut(s) 430, 760, 1339
RseI CAYNNNNRTG 4 cut(s) 545, 1106, 1571, 1688
SapI GCTCTTC 1 cut(s) 450
SaqAI TTAA 6 cut(s) 393, 771, 836, 909, 1343, 1439
SatI GCNGC 7 cut(s) 735, 1065, 1187, 1495, 1518, 1521, 1758
Sau3AI GATC 6 cut(s) 312, 654, 943, 1239, 1410, 1449
Sau96I GGNCC 4 cut(s) 265, 305, 1324, 1830
SchI GAGTC 1 cut(s) 235
ScrFI CCNGG 3 cut(s) 309, 467, 1382
SduI GDGCHC 3 cut(s) 72, 237, 462
SfaNI GCATC 5 cut(s) 157, 501, 765, 802, 1753
SgrAI CRCCGGYG 1 cut(s) 1022
SinI GGWCC 3 cut(s) 265, 305, 1324
SmiMI CAYNNNNRTG 4 cut(s) 545, 1106, 1571, 1688
SpeI ACTAGT 2 cut(s) 569, 980
SsiI CCGC 6 cut(s) 263, 302, 484, 615, 869, 1757
SspI AATATT 1 cut(s) 39
SspMI CTAG 4 cut(s) 155, 570, 981, 1083
StyD4I CCNGG 3 cut(s) 307, 465, 1380
StyI CCWWGG 1 cut(s) 543
TaaI ACNGT 3 cut(s) 332, 356, 597
TaiI ACGT 3 cut(s) 79, 435, 482
TaqI TCGA 9 cut(s) 165, 255, 335, 384, 509, 810, 1144, 1331, 1624
TatI WGTACW 1 cut(s) 1338
TauI GCSGC 1 cut(s) 1760
TfiI GAWTC 4 cut(s) 686, 899, 955, 1739
Tru1I TTAA 6 cut(s) 393, 771, 836, 909, 1343, 1439
Tru9I TTAA 6 cut(s) 393, 771, 836, 909, 1343, 1439
TscAI CASTG 4 cut(s) 415, 696, 786, 1080
TseFI GTSAC 3 cut(s) 238, 356, 469
TseI GCWGC 6 cut(s) 734, 1064, 1186, 1494, 1517, 1520
Tsp45I GTSAC 3 cut(s) 238, 356, 469
TspGWI ACGGA 2 cut(s) 163, 777
TspRI CASTG 4 cut(s) 415, 696, 786, 1080
Van91I CCANNNNNTGG 1 cut(s) 480
VneI GTGCAC 1 cut(s) 68
VpaK11BI GGWCC 3 cut(s) 265, 305, 1324
XagI CCTNNNNNAGG 1 cut(s) 1379
XapI RAATTY 6 cut(s) 893, 904, 929, 1016, 1231, 1801
XbaI TCTAGA 1 cut(s) 154
XceI RCATGY 1 cut(s) 1196
XcmI CCANNNNNNNNNTGG 1 cut(s) 1443
XmnI GAANNNNTTC 1 cut(s) 929
XspI CTAG 4 cut(s) 155, 570, 981, 1083
ZraI GACGTC 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.