Rroxscaffold_2G00094180

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000113
Physical Location & Seq
Forward (+)
15483147 .. 15486351
3205 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094180.1

Sequence Viewer

Length: 1752 bp
ATGCCTTCTCAGCCAGTTTATGTTGGGCTCAATTTTCATGCTTTTAACCACCCAGGTAATGCTGCTGCAAACTTGAATGTTCCATCTCATCCCCATTATGCTGCTCAACTGCATAATTTTTTCGAATGCAGCATGATGATGTGCTTATCCTTCTTGCAAGATAAAGCTATCGCGTCTCCTATACCTATGTCAATTCATTTTTTCCCACTTTGTACCCTGGTGTTTGTGAAGCTACACTGGCTACACAGTGAGTTAAGCCATAAAGTTTTAGAACTGGGGGATCAAACATTACCTAATAATAAACGCCCTGCTGATTCTGCCTTCTTGATCAATGATCTGCAGGGTCTGAAAAACAATATCCAACATCCGTTCCTTTGTAAGACCAACAAAAAACATCCTTCCTTTTTCATATCCATAAAAGGTAAGAACAGTGAAACCGAACTCAGGTTCTTACTGTATTCCGATTTTCAATTGAGAAATGCTTTAGCCTTCTCTGCAGTGGGCACAAACTTAGCATGTCGGACGCTCTCTTCAGTCGGCAGCAGCAACAACTGGTTCTCTACGGTACAGGACCTAGCTCCGAGTCTCTTGATTTTGATTCTGTCATCGTCGAAATCCTCTCATGGCTACCCGCCAAATTATTACTCCGATTCCGGTGCGTATGCAAACGATGGCGAGCCTTGTTCTCCGATCCTTATTTCATCAGTAGACACCTCAGCCGCATCAACACCAAAACCAACAACAGCTACTCTCTTTGTTAAGGAGATCTCCACTTTCCGATCGATGGACTGTGAAGCATTATTCAAGTGTTCAAGCCATGATGATGGTCCTGTTCTGAGCAGAGAGCTTGATTTTCCGATACTTGATGTGCCTTTTGAATTTTACTATATAGATATCATTGGTTCATGCAATGGCTTGATATGTCTACTACTTGATTGGAATACTTCAGTTATTATGTTATGGAATCCTTGCACTAGAGAATCCAAGGTGTTACCGCAACCTTCTATTAAGAACCTCCCAAAGTTTTATGGATTCGGTTATGATTCCACAACCGATGATTACAAGGTAATAGTGGGTAGTTTTCCTTCCACTTCCGGTTATGAATATGTTGTTGTTGCTTACTCACTAAAAGCGGGTTCATGGAGGAAGCTTCAGAGCCTGAACCCGAATTTTAGGGTGCTTTGGCATGGCTGTTTAGTAAACGAAGCTCTACATTGGATACTAGATGAACGGGATGAGGATCATAGGGTGATTGCTTCCAAGTTAGTGTCATTTGACTTAGCCGAGGAGAAATTTCATGAGATTGCATCCCCATATTGTCCTAATCCTATTTCCAGAAGTAATTTGGTTGCAAGAGTAGGAAATATTAGAAATTCTTTAACCTTATACAGTCGACCCATCTCAACCAGAGCTGGGTTAGATTTTCGAATGTGGGTGATGATGGAATATGGAGTCCAGAAATCCTGGAATGAAGTCATGAAAATCCCTCCGGACGTTCTGCCTGGAGATTATTGTAAGTGCTTGAAGCCTTTATGCATTTCTGGTGATGGTGTAACTTTGATCGAAGTGTTTATTGATTTAGAAGATAGAGGCTTCTTGATATTGCACAATCCGAAGGAAAAGACAGTTAGGAACGTTACTAAAACTTGTGTGTCTAAAACAGCTACTTACGTAGAAACTTTAGTTTCCCCATTAACAAGCAGTGGTGTGCGAAACAAACATTGTAAGATGCTGAAGAGGTTTTTGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

583

Amino Acids

65.4

Weight (kDa)

7.24

Isoelectric Point (pI)

46.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 290 - 549 3.1e-21 F-box associated beta propeller domain
FBA_1 PF07734 295 - 542 7.1e-24 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 708, 925, 1393
AccII CGCG 1 cut(s) 173
AccIII TCCGGA 1 cut(s) 1489
AciI CCGC 4 cut(s) 632, 720, 995, 1133
AclI AACGTT 1 cut(s) 1635
AclWI GGATC 3 cut(s) 288, 685, 1248
AcsI RAATTY 4 cut(s) 878, 1168, 1292, 1372
AcuI CTGAAG 3 cut(s) 516, 930, 1136
AfaI GTAC 2 cut(s) 214, 567
AfiI CCNNNNNNNGG 3 cut(s) 444, 784, 1413
AgsI TTSAA 6 cut(s) 76, 470, 805, 813, 878, 1525
AjnI CCWGG 4 cut(s) 52, 216, 1463, 1501
AjuI GAANNNNNNNTTGG 1 cut(s) 1727
AluBI AGCT 9 cut(s) 167, 232, 578, 746, 847, 1150, 1208, 1412, 1664
AluI AGCT 9 cut(s) 167, 232, 578, 746, 847, 1150, 1208, 1412, 1664
Alw26I GTCTC 2 cut(s) 180, 590
AlwI GGATC 3 cut(s) 288, 685, 1248
AlwNI CAGNNNCTG 2 cut(s) 346, 1159
Aor13HI TCCGGA 1 cut(s) 1489
ApeKI GCWGC 6 cut(s) 62, 65, 101, 129, 540, 543
ApoI RAATTY 4 cut(s) 878, 1168, 1292, 1372
AspS9I GGNCC 2 cut(s) 571, 827
AsuHPI GGTGA 3 cut(s) 1261, 1447, 1556
AsuII TTCGAA 2 cut(s) 123, 1426
AvaII GGWCC 2 cut(s) 571, 827
BaeGI GKGCMC 1 cut(s) 506
BanII GRGCYC 1 cut(s) 30
BarI GAAGNNNNNNTAC 2 cut(s) 1069, 1101
BbvCI CCTCAGC 1 cut(s) 715
BbvI GCAGC 6 cut(s) 49, 52, 88, 141, 552, 555
BccI CCATC 7 cut(s) 91, 665, 778, 818, 1406, 1435, 1541
BcgI CGANNNNNNTGC 2 cut(s) 638, 672
BciT130I CCWGG 4 cut(s) 54, 218, 1465, 1503
BciVI GTATCC 1 cut(s) 1212
BclI TGATCA 1 cut(s) 327
BcoDI GTCTC 2 cut(s) 180, 590
BfaI CTAG 3 cut(s) 575, 975, 1223
BfmI CTRYAG 2 cut(s) 338, 495
BfuI GTATCC 1 cut(s) 1212
BglII AGATCT 1 cut(s) 765
BisI GCNGC 7 cut(s) 63, 66, 102, 130, 541, 544, 720
BlsI GCNGC 7 cut(s) 64, 67, 103, 131, 542, 545, 721
Bme1390I CCNGG 4 cut(s) 54, 218, 1465, 1503
Bme18I GGWCC 2 cut(s) 571, 827
BmgT120I GGNCC 2 cut(s) 571, 827
BmrFI CCNGG 4 cut(s) 54, 218, 1465, 1503
BmrI ACTGGG 1 cut(s) 284
BmsI GCATC 3 cut(s) 731, 1316, 1719
BmuI ACTGGG 1 cut(s) 284
BpmI CTGGAG 1 cut(s) 1524
Bpu10I CCTNAGC 1 cut(s) 715
Bpu14I TTCGAA 2 cut(s) 123, 1426
Bsa29I ATCGAT 1 cut(s) 782
BsaAI YACGTR 1 cut(s) 1672
BsaBI GATNNNNATC 1 cut(s) 1239
BsaJI CCNNGG 4 cut(s) 52, 216, 984, 1284
BsaWI WCCGGW 3 cut(s) 653, 1094, 1489
Bsc4I CCNNNNNNNGG 3 cut(s) 444, 784, 1413
Bse1I ACTGG 4 cut(s) 14, 242, 279, 557
Bse3DI GCAATG 1 cut(s) 916
Bse8I GATNNNNATC 1 cut(s) 1239
BseAI TCCGGA 1 cut(s) 1489
BseBI CCWGG 4 cut(s) 54, 218, 1465, 1503
BseCI ATCGAT 1 cut(s) 782
BseDI CCNNGG 4 cut(s) 52, 216, 984, 1284
BseGI GGATG 5 cut(s) 88, 364, 394, 1240, 1307
BseJI GATNNNNATC 1 cut(s) 1239
BseLI CCNNNNNNNGG 3 cut(s) 444, 784, 1413
BseMI GCAATG 1 cut(s) 916
BseMII CTCAG 4 cut(s) 23, 457, 729, 827
BseNI ACTGG 4 cut(s) 14, 242, 279, 557
BseRI GAGGAG 1 cut(s) 1301
BseSI GKGCMC 1 cut(s) 506
BseXI GCAGC 6 cut(s) 49, 52, 88, 141, 552, 555
BseYI CCCAGC 1 cut(s) 1412
Bsh1236I CGCG 1 cut(s) 173
Bsh1285I CGRYCG 1 cut(s) 782
BshVI ATCGAT 1 cut(s) 782
BsiEI CGRYCG 1 cut(s) 782
BsiSI CCGG 3 cut(s) 654, 1095, 1490
BslI CCNNNNNNNGG 3 cut(s) 444, 784, 1413
BsmAI GTCTC 2 cut(s) 180, 590
BsmBI CGTCTC 1 cut(s) 180
BsmI GAATGC 1 cut(s) 131
Bsp119I TTCGAA 2 cut(s) 123, 1426
Bsp1286I GDGCHC 2 cut(s) 30, 506
Bsp13I TCCGGA 1 cut(s) 1489
Bsp143I GATC 8 cut(s) 280, 327, 334, 690, 765, 779, 1240, 1560
BspACI CCGC 4 cut(s) 632, 720, 995, 1133
BspCNI CTCAG 4 cut(s) 22, 456, 728, 828
BspDI ATCGAT 1 cut(s) 782
BspEI TCCGGA 1 cut(s) 1489
BspFNI CGCG 1 cut(s) 173
BspHI TCATGA 2 cut(s) 1297, 1476
BspMAI CTGCAG 2 cut(s) 342, 499
BspPI GGATC 3 cut(s) 288, 685, 1248
BspT104I TTCGAA 2 cut(s) 123, 1426
BsrDI GCAATG 1 cut(s) 916
BsrI ACTGG 4 cut(s) 14, 242, 279, 557
BssECI CCNNGG 4 cut(s) 52, 216, 984, 1284
BssMI GATC 8 cut(s) 280, 327, 334, 690, 765, 779, 1240, 1560
BssT1I CCWWGG 1 cut(s) 984
Bst2UI CCWGG 4 cut(s) 54, 218, 1465, 1503
Bst4CI ACNGT 7 cut(s) 248, 431, 456, 565, 791, 1391, 1627
Bst6I CTCTTC 2 cut(s) 535, 1730
BstBAI YACGTR 1 cut(s) 1672
BstBI TTCGAA 2 cut(s) 123, 1426
BstC8I GCNNGC 1 cut(s) 677
BstDEI CTNAG 6 cut(s) 9, 443, 511, 715, 836, 1279
BstF5I GGATG 5 cut(s) 88, 364, 394, 1240, 1307
BstFNI CGCG 1 cut(s) 173
BstKTI GATC 8 cut(s) 283, 330, 337, 693, 768, 782, 1243, 1563
BstMAI GTCTC 2 cut(s) 180, 590
BstMBI GATC 8 cut(s) 280, 327, 334, 690, 765, 779, 1240, 1560
BstMCI CGRYCG 1 cut(s) 782
BstMWI GCNNNNNNNGC 4 cut(s) 10, 238, 317, 494
BstNI CCWGG 4 cut(s) 54, 218, 1465, 1503
BstNSI RCATGY 1 cut(s) 519
BstSCI CCNGG 4 cut(s) 52, 216, 1463, 1501
BstSFI CTRYAG 2 cut(s) 338, 495
BstSLI GKGCMC 1 cut(s) 506
BstSNI TACGTA 1 cut(s) 1672
BstUI CGCG 1 cut(s) 173
BstV1I GCAGC 6 cut(s) 49, 52, 88, 141, 552, 555
BstX2I RGATCY 1 cut(s) 765
BstXI CCANNNNNNTGG 1 cut(s) 824
BstYI RGATCY 1 cut(s) 765
Bsu15I ATCGAT 1 cut(s) 782
BsuI GTATCC 1 cut(s) 1212
BsuTUI ATCGAT 1 cut(s) 782
BtsCI GGATG 5 cut(s) 88, 364, 394, 1240, 1307
BtsI GCAGTG 2 cut(s) 504, 1708
BtsIMutI CAGTG 5 cut(s) 235, 253, 436, 504, 1708
Cac8I GCNNGC 1 cut(s) 677
CaiI CAGNNNCTG 2 cut(s) 346, 1159
CciI TCATGA 2 cut(s) 1297, 1476
Cfr13I GGNCC 2 cut(s) 571, 827
ClaI ATCGAT 1 cut(s) 782
CseI GACGC 2 cut(s) 162, 532
Csp6I GTAC 2 cut(s) 213, 566
CviQI GTAC 2 cut(s) 213, 566
DdeI CTNAG 6 cut(s) 9, 443, 511, 715, 836, 1279
DpnI GATC 8 cut(s) 282, 329, 336, 692, 767, 781, 1242, 1562
DpnII GATC 8 cut(s) 280, 327, 334, 690, 765, 779, 1240, 1560
Eam1104I CTCTTC 2 cut(s) 535, 1730
EarI CTCTTC 2 cut(s) 535, 1730
Eco105I TACGTA 1 cut(s) 1672
Eco130I CCWWGG 1 cut(s) 984
Eco24I GRGCYC 1 cut(s) 30
Eco32I GATATC 1 cut(s) 895
Eco47I GGWCC 2 cut(s) 571, 827
Eco57I CTGAAG 3 cut(s) 516, 930, 1136
EcoO109I RGGNCCY 1 cut(s) 571
EcoRII CCWGG 4 cut(s) 52, 216, 1463, 1501
EcoRV GATATC 1 cut(s) 895
EcoT14I CCWWGG 1 cut(s) 984
EcoT22I ATGCAT 1 cut(s) 1538
EcoT38I GRGCYC 1 cut(s) 30
ErhI CCWWGG 1 cut(s) 984
Esp3I CGTCTC 1 cut(s) 180
FauI CCCGC 2 cut(s) 639, 1126
FbaI TGATCA 1 cut(s) 327
FblI GTMKAC 3 cut(s) 708, 925, 1393
Fnu4HI GCNGC 7 cut(s) 63, 66, 102, 130, 541, 544, 720
FokI GGATG 5 cut(s) 75, 351, 381, 1247, 1294
FriOI GRGCYC 1 cut(s) 30
Fsp4HI GCNGC 7 cut(s) 63, 66, 102, 130, 541, 544, 720
FspBI CTAG 3 cut(s) 575, 975, 1223
GluI GCNGC 7 cut(s) 63, 66, 102, 130, 541, 544, 720
GsaI CCCAGC 1 cut(s) 1416
GsuI CTGGAG 1 cut(s) 1524
HapII CCGG 3 cut(s) 654, 1095, 1490
HgaI GACGC 2 cut(s) 162, 532
HincII GTYRAC 1 cut(s) 1394
HindII GTYRAC 1 cut(s) 1394
HindIII AAGCTT 1 cut(s) 1148
HinfI GANTC 9 cut(s) 314, 583, 598, 650, 964, 980, 1032, 1043, 1452
HpaII CCGG 3 cut(s) 654, 1095, 1490
HphI GGTGA 3 cut(s) 1261, 1447, 1556
Hpy166II GTNNAC 4 cut(s) 709, 926, 1201, 1394
Hpy188III TCNNGA 8 cut(s) 325, 589, 1298, 1335, 1456, 1477, 1490, 1597
Hpy8I GTNNAC 4 cut(s) 709, 926, 1201, 1394
Hpy99I CGWCG 1 cut(s) 613
HpyAV CCTTC 8 cut(s) 15, 160, 331, 408, 499, 1011, 1095, 1609
HpyCH4III ACNGT 7 cut(s) 248, 431, 456, 565, 791, 1391, 1627
HpyCH4IV ACGT 3 cut(s) 1494, 1635, 1671
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 238, 317, 494
HpyF3I CTNAG 6 cut(s) 9, 443, 511, 715, 836, 1279
HpySE526I ACGT 3 cut(s) 1494, 1635, 1671
Kpn2I TCCGGA 1 cut(s) 1489
Ksp22I TGATCA 1 cut(s) 327
Kzo9I GATC 8 cut(s) 280, 327, 334, 690, 765, 779, 1240, 1560
LmnI GCTCC 1 cut(s) 583
Lsp1109I GCAGC 6 cut(s) 49, 52, 88, 141, 552, 555
LweI GCATC 3 cut(s) 731, 1316, 1719
MaeI CTAG 3 cut(s) 575, 975, 1223
MaeII ACGT 3 cut(s) 1494, 1635, 1671
MaeIII GTNAC 3 cut(s) 990, 1552, 1636
MalI GATC 8 cut(s) 282, 329, 336, 692, 767, 781, 1242, 1562
MboI GATC 8 cut(s) 280, 327, 334, 690, 765, 779, 1240, 1560
MboII GAAGA 3 cut(s) 522, 1595, 1747
MfeI CAATTG 1 cut(s) 470
MflI RGATCY 1 cut(s) 765
MhlI GDGCHC 2 cut(s) 30, 506
MlyI GAGTC 2 cut(s) 592, 1461
MmeI TCCRAC 2 cut(s) 385, 500
MnlI CCTC 9 cut(s) 628, 724, 1025, 1137, 1231, 1279, 1497, 1583, 1731
Mph1103I ATGCAT 1 cut(s) 1538
MroI TCCGGA 1 cut(s) 1489
MseI TTAA 6 cut(s) 45, 254, 759, 1008, 1379, 1694
MslI CAYNNNNRTG 2 cut(s) 137, 822
MspI CCGG 3 cut(s) 654, 1095, 1490
MspR9I CCNGG 4 cut(s) 54, 218, 1465, 1503
MunI CAATTG 1 cut(s) 470
Mva1269I GAATGC 1 cut(s) 131
MvaI CCWGG 4 cut(s) 54, 218, 1465, 1503
MvnI CGCG 1 cut(s) 173
MwoI GCNNNNNNNGC 4 cut(s) 10, 238, 317, 494
NdeII GATC 8 cut(s) 280, 327, 334, 690, 765, 779, 1240, 1560
NmeAIII GCCGAG 1 cut(s) 1309
NsiI ATGCAT 1 cut(s) 1538
NspI RCATGY 1 cut(s) 519
NspV TTCGAA 2 cut(s) 123, 1426
PagI TCATGA 2 cut(s) 1297, 1476
PctI GAATGC 1 cut(s) 131
PfeI GAWTC 7 cut(s) 314, 598, 650, 964, 980, 1032, 1043
PfoI TCCNGGA 1 cut(s) 1463
PkrI GCNGC 7 cut(s) 64, 67, 103, 131, 542, 545, 721
Ple19I CGATCG 1 cut(s) 782
PleI GAGTC 2 cut(s) 591, 1460
PpsI GAGTC 2 cut(s) 591, 1460
Ppu21I YACGTR 1 cut(s) 1672
PpuMI RGGWCCY 1 cut(s) 571
Psp1406I AACGTT 1 cut(s) 1635
Psp5II RGGWCCY 1 cut(s) 571
Psp6I CCWGG 4 cut(s) 52, 216, 1463, 1501
PspFI CCCAGC 1 cut(s) 1412
PspGI CCWGG 4 cut(s) 52, 216, 1463, 1501
PspPI GGNCC 2 cut(s) 571, 827
PspPPI RGGWCCY 1 cut(s) 571
PstI CTGCAG 2 cut(s) 342, 499
PstNI CAGNNNCTG 2 cut(s) 346, 1159
PsuI RGATCY 1 cut(s) 765
PvuI CGATCG 1 cut(s) 782
RsaI GTAC 2 cut(s) 214, 567
RsaNI GTAC 2 cut(s) 213, 566
RseI CAYNNNNRTG 2 cut(s) 137, 822
SalI GTCGAC 1 cut(s) 1392
SaqAI TTAA 6 cut(s) 45, 254, 759, 1008, 1379, 1694
SatI GCNGC 7 cut(s) 63, 66, 102, 130, 541, 544, 720
Sau3AI GATC 8 cut(s) 280, 327, 334, 690, 765, 779, 1240, 1560
Sau96I GGNCC 2 cut(s) 571, 827
SchI GAGTC 2 cut(s) 592, 1461
ScrFI CCNGG 4 cut(s) 54, 218, 1465, 1503
SduI GDGCHC 2 cut(s) 30, 506
SfaNI GCATC 3 cut(s) 731, 1316, 1719
SfcI CTRYAG 2 cut(s) 338, 495
SfuI TTCGAA 2 cut(s) 123, 1426
SinI GGWCC 2 cut(s) 571, 827
SmiMI CAYNNNNRTG 2 cut(s) 137, 822
SnaBI TACGTA 1 cut(s) 1672
SsiI CCGC 4 cut(s) 632, 720, 995, 1133
SspI AATATT 1 cut(s) 1366
SspMI CTAG 3 cut(s) 575, 975, 1223
StyD4I CCNGG 4 cut(s) 52, 216, 1463, 1501
StyI CCWWGG 1 cut(s) 984
TaaI ACNGT 7 cut(s) 248, 431, 456, 565, 791, 1391, 1627
TaiI ACGT 3 cut(s) 1497, 1638, 1674
TaqI TCGA 6 cut(s) 123, 611, 782, 1393, 1426, 1563
TauI GCSGC 1 cut(s) 722
TfiI GAWTC 7 cut(s) 314, 598, 650, 964, 980, 1032, 1043
Tru1I TTAA 6 cut(s) 45, 254, 759, 1008, 1379, 1694
Tru9I TTAA 6 cut(s) 45, 254, 759, 1008, 1379, 1694
TscAI CASTG 5 cut(s) 242, 253, 436, 504, 1708
TseI GCWGC 6 cut(s) 62, 65, 101, 129, 540, 543
TspGWI ACGGA 1 cut(s) 357
TspRI CASTG 5 cut(s) 242, 253, 436, 504, 1708
VpaK11BI GGWCC 2 cut(s) 571, 827
XapI RAATTY 4 cut(s) 878, 1168, 1292, 1372
XceI RCATGY 1 cut(s) 519
XcmI CCANNNNNNNNNTGG 1 cut(s) 1342
XmiI GTMKAC 3 cut(s) 708, 925, 1393
XspI CTAG 3 cut(s) 575, 975, 1223
Zsp2I ATGCAT 1 cut(s) 1538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.