RchiOBHm_Chr1g0347341

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000113
Physical Location & Seq
Reverse (-)
39957470 .. 39961674
4205 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57346

Sequence Viewer

Length: 960 bp
ATGGCCACCAATTCCATGGCGGACGACGGCGGCGTTCACAAGCGAGGTGTCGCCGACCTCGACGGCGTCCTTGATGAGATACTGGCAAGGCTACCGGTCAAATCACTGATGCGATTTCGCTGCGTCTGCACGTCATGGCGTGCTCTCATCTCCCAGTCTCATTTTGTCACCAAGCACTTCAACTACGCAAGCAAAGGCTTCACCGAGAACACCTCCAGGCTCTTGATATCAATGAGTCCTCTCCAATCCCAAGACTGTGAAGCATCCAAGGACTTATCCCTAGACTGTGAGGCATTGAAGGAGTTGAAGGATGACGGAGATGCTCATCTTGCAATTGGAAAGCTCGAGTTTCCGAAAGACATGGTGTTATGGAACCCTTGTACTGGACAATCCAATTTGTTGCCAAAACCTACTGATCATTGCATTCCGCAGTTTCACGGATTTGGTTATGATTCCACTAATGATGATTATAAGGTAGTGAGAGGGTACAATTATATAGTTAGGGGTTCTGAGGAAACCATGGTTCAGGTCTTTCGTTTAAAATCAGAGGAAAAGTTTCGGGAGATGCTTCCATTGCCCTCTCTGGTTGGGCTTAGAATATGGATGATGAAGGAATATGGGGTCAAGGAATCGTGGACTGAAGTTGCTTCTTTTGATTTACCAAAAGATTATAAATTCTCACTCGTGACGCCTCTGTGCATATTAGAGAATGGTGAAGGTTTGATCGCCAGCAGATGTGATTTTCAGTCCTTGGTATTCTATAGCTTCAAGGAACAGACATTTAGGAATGTTTTTAGGACCCACAACGGATGGAAATTTGATGGACTCATTTACAGGGAGACTTTAGTTTCACCAGTCACCAGTGGAATTGCAGACATCTCTAAGGTCAACACTGTGAGTTTTCATTTGCTCTTTCTGTCAAATATGATTGACTATCATTCTATTACTAAATTTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

319

Amino Acids

36.32

Weight (kDa)

6.15

Isoelectric Point (pI)

37.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 23 - 55 1.5e-08 F-box domain
FBA_1 PF07734 119 - 183 1.5e-06 F-box associated beta propeller domain
FBA_3 PF08268 120 - 189 1.4e-08 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 471, 672
AciI CCGC 3 cut(s) 20, 30, 428
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 674, 815, 950
AcuI CTGAAG 1 cut(s) 660
AcyI GRCGYC 2 cut(s) 66, 689
AfaI GTAC 2 cut(s) 382, 488
AfiI CCNNNNNNNGG 1 cut(s) 383
AgeI ACCGGT 1 cut(s) 94
AgsI TTSAA 4 cut(s) 181, 298, 307, 769
AjiI CACGTC 1 cut(s) 132
AjnI CCWGG 1 cut(s) 215
AluBI AGCT 2 cut(s) 343, 765
AluI AGCT 2 cut(s) 343, 765
Alw21I GWGCWC 1 cut(s) 145
Alw26I GTCTC 2 cut(s) 162, 833
Ama87I CYCGRG 1 cut(s) 344
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 120
ApoI RAATTY 3 cut(s) 674, 815, 950
AsiGI ACCGGT 1 cut(s) 94
Asp700I GAANNNNTTC 1 cut(s) 555
AspS9I GGNCC 1 cut(s) 798
AsuHPI GGTGA 5 cut(s) 160, 193, 725, 843, 850
AvaI CYCGRG 1 cut(s) 344
AvaII GGWCC 1 cut(s) 798
BalI TGGCCA 1 cut(s) 5
BauI CACGAG 1 cut(s) 683
Bbv12I GWGCWC 1 cut(s) 145
BbvI GCAGC 1 cut(s) 107
BccI CCATC 2 cut(s) 804, 815
BceAI ACGGC 2 cut(s) 43, 79
BcgI CGANNNNNNTGC 2 cut(s) 102, 136
BciT130I CCWGG 1 cut(s) 217
BclI TGATCA 1 cut(s) 415
BcoDI GTCTC 2 cut(s) 162, 833
BfaI CTAG 1 cut(s) 281
BfmI CTRYAG 1 cut(s) 760
BisI GCNGC 2 cut(s) 31, 121
BlsI GCNGC 2 cut(s) 32, 122
Bme1390I CCNGG 1 cut(s) 217
Bme18I GGWCC 1 cut(s) 798
BmeT110I CYCGRG 1 cut(s) 344
BmgBI CACGTC 1 cut(s) 132
BmgT120I GGNCC 1 cut(s) 798
BmiI GGNNCC 2 cut(s) 374, 800
BmrFI CCNGG 1 cut(s) 217
BmrI ACTGGG 1 cut(s) 148
BmsI GCATC 4 cut(s) 99, 272, 310, 555
BmuI ACTGGG 1 cut(s) 148
BplI GAGNNNNNCTC 2 cut(s) 197, 229
BpmI CTGGAG 1 cut(s) 199
BsaBI GATNNNNATC 1 cut(s) 324
BsaHI GRCGYC 2 cut(s) 66, 689
BsaJI CCNNGG 4 cut(s) 15, 267, 519, 750
BsaWI WCCGGW 1 cut(s) 94
Bsc4I CCNNNNNNNGG 1 cut(s) 383
Bse118I RCCGGY 1 cut(s) 94
Bse1I ACTGG 5 cut(s) 87, 154, 388, 854, 861
Bse3DI GCAATG 2 cut(s) 418, 572
Bse8I GATNNNNATC 1 cut(s) 324
BseBI CCWGG 1 cut(s) 217
BseDI CCNNGG 4 cut(s) 15, 267, 519, 750
BseGI GGATG 4 cut(s) 263, 316, 609, 815
BseJI GATNNNNATC 1 cut(s) 324
BseLI CCNNNNNNNGG 1 cut(s) 383
BseMI GCAATG 2 cut(s) 418, 572
BseMII CTCAG 1 cut(s) 501
BseNI ACTGG 5 cut(s) 87, 154, 388, 854, 861
BseXI GCAGC 1 cut(s) 107
BsgI GTGCAG 1 cut(s) 112
BshFI GGCC 1 cut(s) 5
BshTI ACCGGT 1 cut(s) 94
BsiHKAI GWGCWC 1 cut(s) 145
BsiHKCI CYCGRG 1 cut(s) 344
BsiSI CCGG 1 cut(s) 95
BslI CCNNNNNNNGG 1 cut(s) 383
BsmAI GTCTC 2 cut(s) 162, 833
BsmI GAATGC 1 cut(s) 423
BsnI GGCC 1 cut(s) 5
BsoBI CYCGRG 1 cut(s) 344
Bsp1286I GDGCHC 1 cut(s) 145
Bsp143I GATC 2 cut(s) 415, 723
Bsp19I CCATGG 2 cut(s) 15, 519
BspACI CCGC 3 cut(s) 20, 30, 428
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 502
BspLI GGNNCC 2 cut(s) 374, 800
BsrDI GCAATG 2 cut(s) 418, 572
BsrFI RCCGGY 1 cut(s) 94
BsrI ACTGG 5 cut(s) 87, 154, 388, 854, 861
BssAI RCCGGY 1 cut(s) 94
BssECI CCNNGG 4 cut(s) 15, 267, 519, 750
BssMI GATC 2 cut(s) 415, 723
BssNI GRCGYC 2 cut(s) 66, 689
BssSI CACGAG 1 cut(s) 683
BssT1I CCWWGG 4 cut(s) 15, 267, 519, 750
Bst2BI CACGAG 1 cut(s) 683
Bst2UI CCWGG 1 cut(s) 217
Bst4CI ACNGT 3 cut(s) 257, 287, 895
BstACI GRCGYC 2 cut(s) 66, 689
BstC8I GCNNGC 3 cut(s) 141, 190, 730
BstDEI CTNAG 3 cut(s) 510, 593, 882
BstDSI CCRYGG 2 cut(s) 15, 519
BstF5I GGATG 4 cut(s) 263, 316, 609, 815
BstKTI GATC 2 cut(s) 418, 726
BstMAI GTCTC 2 cut(s) 162, 833
BstMBI GATC 2 cut(s) 415, 723
BstMWI GCNNNNNNNGC 3 cut(s) 126, 329, 574
BstNI CCWGG 1 cut(s) 217
BstSCI CCNGG 1 cut(s) 215
BstSFI CTRYAG 1 cut(s) 760
BstV1I GCAGC 1 cut(s) 107
BstXI CCANNNNNNTGG 1 cut(s) 16
BsuRI GGCC 1 cut(s) 5
BtgI CCRYGG 2 cut(s) 15, 519
BtrI CACGTC 1 cut(s) 132
BtsCI GGATG 4 cut(s) 263, 316, 609, 815
BtsIMutI CAGTG 3 cut(s) 104, 868, 891
Cac8I GCNNGC 3 cut(s) 141, 190, 730
Cfr10I RCCGGY 1 cut(s) 94
Cfr13I GGNCC 1 cut(s) 798
CseI GACGC 3 cut(s) 55, 112, 697
Csp6I GTAC 2 cut(s) 381, 487
CspAI ACCGGT 1 cut(s) 94
CviAII CATG 4 cut(s) 16, 135, 361, 520
CviJI RGCY 7 cut(s) 5, 91, 198, 220, 343, 592, 765
CviKI_1 RGCY 7 cut(s) 5, 91, 198, 220, 343, 592, 765
CviQI GTAC 2 cut(s) 381, 487
DdeI CTNAG 3 cut(s) 510, 593, 882
DpnI GATC 2 cut(s) 417, 725
DpnII GATC 2 cut(s) 415, 723
DraI TTTAAA 1 cut(s) 540
EaeI YGGCCR 1 cut(s) 3
EciI GGCGGA 1 cut(s) 35
Eco130I CCWWGG 4 cut(s) 15, 267, 519, 750
Eco32I GATATC 1 cut(s) 228
Eco47I GGWCC 1 cut(s) 798
Eco57I CTGAAG 1 cut(s) 660
Eco88I CYCGRG 1 cut(s) 344
EcoO109I RGGNCCY 1 cut(s) 798
EcoRII CCWGG 1 cut(s) 215
EcoRV GATATC 1 cut(s) 228
EcoT14I CCWWGG 4 cut(s) 15, 267, 519, 750
ErhI CCWWGG 4 cut(s) 15, 267, 519, 750
FaeI CATG 4 cut(s) 19, 138, 364, 523
FatI CATG 4 cut(s) 15, 134, 360, 519
FbaI TGATCA 1 cut(s) 415
Fnu4HI GCNGC 2 cut(s) 31, 121
FokI GGATG 4 cut(s) 250, 323, 616, 822
Fsp4HI GCNGC 2 cut(s) 31, 121
FspBI CTAG 1 cut(s) 281
GluI GCNGC 2 cut(s) 31, 121
GsuI CTGGAG 1 cut(s) 199
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 95
HgaI GACGC 3 cut(s) 55, 112, 697
Hin1I GRCGYC 2 cut(s) 66, 689
Hin1II CATG 4 cut(s) 19, 138, 364, 523
HincII GTYRAC 1 cut(s) 889
HindII GTYRAC 1 cut(s) 889
HinfI GANTC 4 cut(s) 235, 452, 629, 825
HpaII CCGG 1 cut(s) 95
HphI GGTGA 5 cut(s) 160, 193, 725, 843, 850
Hpy166II GTNNAC 3 cut(s) 37, 636, 889
Hpy188I TCNGA 3 cut(s) 354, 511, 547
Hpy188III TCNNGA 3 cut(s) 223, 560, 685
Hpy8I GTNNAC 3 cut(s) 37, 636, 889
Hpy99I CGWCG 2 cut(s) 29, 65
HpyAV CCTTC 4 cut(s) 292, 301, 604, 710
HpyCH4III ACNGT 3 cut(s) 257, 287, 895
HpyCH4IV ACGT 1 cut(s) 131
HpyCH4V TGCA 5 cut(s) 129, 332, 423, 699, 872
HpyF10VI GCNNNNNNNGC 3 cut(s) 126, 329, 574
HpyF3I CTNAG 3 cut(s) 510, 593, 882
HpySE526I ACGT 1 cut(s) 131
Hsp92I GRCGYC 2 cut(s) 66, 689
Hsp92II CATG 4 cut(s) 19, 138, 364, 523
Ksp22I TGATCA 1 cut(s) 415
Kzo9I GATC 2 cut(s) 415, 723
Lsp1109I GCAGC 1 cut(s) 107
LweI GCATC 4 cut(s) 99, 272, 310, 555
MaeI CTAG 1 cut(s) 281
MaeII ACGT 1 cut(s) 131
MaeIII GTNAC 3 cut(s) 166, 685, 856
MalI GATC 2 cut(s) 417, 725
MboI GATC 2 cut(s) 415, 723
MfeI CAATTG 1 cut(s) 333
MhlI GDGCHC 1 cut(s) 145
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 10, 333, 394, 490, 674, 815, 867, 950
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 244, 819
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 555
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 539
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 1 cut(s) 95
MspR9I CCNGG 1 cut(s) 217
MunI CAATTG 1 cut(s) 333
Mva1269I GAATGC 1 cut(s) 423
MvaI CCWGG 1 cut(s) 217
MwoI GCNNNNNNNGC 3 cut(s) 126, 329, 574
NcoI CCATGG 2 cut(s) 15, 519
NdeII GATC 2 cut(s) 415, 723
NlaIII CATG 4 cut(s) 19, 138, 364, 523
NlaIV GGNNCC 2 cut(s) 374, 800
NmuCI GTSAC 3 cut(s) 166, 685, 856
PaeR7I CTCGAG 1 cut(s) 344
PcsI WCGNNNNNNNCGW 2 cut(s) 30, 57
PctI GAATGC 1 cut(s) 423
PdmI GAANNNNTTC 1 cut(s) 555
PfeI GAWTC 2 cut(s) 452, 629
PflFI GACNNNGTC 1 cut(s) 65
PinAI ACCGGT 1 cut(s) 94
PkrI GCNGC 2 cut(s) 32, 122
PleI GAGTC 2 cut(s) 243, 819
PpsI GAGTC 2 cut(s) 243, 819
PpuMI RGGWCCY 1 cut(s) 798
PsiI TTATAA 2 cut(s) 471, 672
Psp5II RGGWCCY 1 cut(s) 798
Psp6I CCWGG 1 cut(s) 215
PspGI CCWGG 1 cut(s) 215
PspN4I GGNNCC 2 cut(s) 374, 800
PspPI GGNCC 1 cut(s) 798
PspPPI RGGWCCY 1 cut(s) 798
PspXI VCTCGAGB 1 cut(s) 344
PsyI GACNNNGTC 1 cut(s) 65
RsaI GTAC 2 cut(s) 382, 488
RsaNI GTAC 2 cut(s) 381, 487
SaqAI TTAA 1 cut(s) 539
SatI GCNGC 2 cut(s) 31, 121
Sau3AI GATC 2 cut(s) 415, 723
Sau96I GGNCC 1 cut(s) 798
SchI GAGTC 2 cut(s) 244, 819
ScrFI CCNGG 1 cut(s) 217
SduI GDGCHC 1 cut(s) 145
SfaNI GCATC 4 cut(s) 99, 272, 310, 555
SfcI CTRYAG 1 cut(s) 760
Sfr274I CTCGAG 1 cut(s) 344
SinI GGWCC 1 cut(s) 798
SlaI CTCGAG 1 cut(s) 344
SmlI CTYRAG 1 cut(s) 344
SmoI CTYRAG 1 cut(s) 344
Sse9I AATT 8 cut(s) 10, 333, 394, 490, 674, 815, 867, 950
SsiI CCGC 3 cut(s) 20, 30, 428
SspMI CTAG 1 cut(s) 281
StyD4I CCNGG 1 cut(s) 215
StyI CCWWGG 4 cut(s) 15, 267, 519, 750
TaaI ACNGT 3 cut(s) 257, 287, 895
TaiI ACGT 1 cut(s) 134
TaqI TCGA 2 cut(s) 60, 345
TasI AATT 8 cut(s) 10, 333, 394, 490, 674, 815, 867, 950
TatI WGTACW 1 cut(s) 380
TauI GCSGC 1 cut(s) 33
TfiI GAWTC 2 cut(s) 452, 629
Tru1I TTAA 1 cut(s) 539
Tru9I TTAA 1 cut(s) 539
TscAI CASTG 3 cut(s) 111, 868, 898
TseFI GTSAC 3 cut(s) 166, 685, 856
TseI GCWGC 1 cut(s) 120
Tsp45I GTSAC 3 cut(s) 166, 685, 856
TspDTI ATGAA 2 cut(s) 623, 893
TspGWI ACGGA 3 cut(s) 330, 453, 822
TspRI CASTG 3 cut(s) 111, 868, 898
Tth111I GACNNNGTC 1 cut(s) 65
VpaK11BI GGWCC 1 cut(s) 798
XapI RAATTY 3 cut(s) 674, 815, 950
XcmI CCANNNNNNNNNTGG 1 cut(s) 13
XhoI CTCGAG 1 cut(s) 344
XmnI GAANNNNTTC 1 cut(s) 555
XspI CTAG 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.