RchiOBHm_Chr1g0347171

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000113
Physical Location & Seq
Reverse (-)
39805632 .. 39808861
3230 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57332

Sequence Viewer

Length: 1203 bp
ATGGCGGAAGACGGCGGCCTTTATAAGCGAGCTCTTACCAGTCTCACTGACCTCGACGACGTCCTTGATGAGATACTGGCATGGCTACCGGTCAAATCTTTGATGCGATTTCGCTGCGTCTGCAAGTCATGGCGTGCTCTCATTTCCCAGTCTTATTTTGTCACCAAGCACTTCAACTACGCAAGCAAACGCTTCACCGAGAACACCTCCAGGCTTTTGATATCAACGAGTCCTCTCAAATCCCTAGACTGTGAAGCATCCATGTTATCCCTAGACTGTGAGGCATTGAAGGACTTGAACGATGATGGAGATGCTCATCTCGCAATTAGAAAGCTCGAGTTTCCGGTAATGTTCCCTAATTCCAGTCGTAGAAATATTGTGGGTTCTTGCAATGGCCTGATTTGTGTAGAAATTGACCTGAAAGACATGGTGTTATGGAACCCTTGTACTGGACAATCCAATTTGCTGCCAAAACGTCCTGGTCAGGTCTCTTCGCAGCTTTGCGGAGTTGGTTATGATCTCACTACGAAGTTTAGCGGATTTGGTTATGATTCCACTAATGATGATTATAAGGTGGTGAGAGGGTACAATTATAGAGTTACGGGTTCTGAGGAAACCGTGGTTCAGGTCTTTAGTTTAAAATCGGGTTCGTGGAGAACCCATGAGGGTCTCAGTTACTTTGGCTTGGTAGGGCCGGGGTGCTTGTTAAATGGTGCTCTGCACTGGCCAGAGACCATATTTGATCATTTTGATCCAACAGATTCGAGGATTATCTCTTTTGATTTAGCACAGGAAAAGTTTCGGGAGATGCTTCCATTGCCCTCTCAGGCTGGTTTTGAATGCTACTTTGTTTGTGGAGATTGTCTTGGTGTATATGAATATAGCGATCCAAACAATGAGTTCGTCAGGTTTAGAATATGGATGATGAAGGAATATGGGGTCAAGGAATCGTGGACTGAAGTTGCTTCTTTAGATATCTTACATAAAGATGCTGAATTCTCACTCTTGATGCCTCTGTGCATATTAGAGAATGGTGAAGGTTTGATCGCCAACAGATATGATTTTCAGTCCTTGGTATTATATAGCTTCAAGGAACAGACATTCAGGAATGTTTTTAAGACCCACAACAAATGGAATTTTGATGCAGTCATTTACAGGGAGACTTTAGTTTCACCAGCCACCAGTGGTATTGCAGACATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

400

Amino Acids

45.43

Weight (kDa)

5.16

Isoelectric Point (pI)

39.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 53 7.4e-10 F-box domain
F-box-like PF12937 19 - 53 2e-06 F-box-like
FBA_3 PF08268 113 - 371 6.8e-21 F-box associated beta propeller domain
Beta-prop_KIB1-4 PF03478 114 - 325 9.3e-07 KIB1-4 beta-propeller
FBA_1 PF07734 124 - 370 1.3e-26 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 24, 570
AatII GACGTC 1 cut(s) 63
AciI CCGC 4 cut(s) 5, 15, 504, 537
AclWI GGATC 2 cut(s) 746, 881
AcoI YGGCCR 1 cut(s) 725
AcsI RAATTY 2 cut(s) 995, 1135
AcuI CTGAAG 1 cut(s) 978
AcyI GRCGYC 1 cut(s) 60
AfaI GTAC 2 cut(s) 448, 587
AfiI CCNNNNNNNGG 1 cut(s) 449
AgeI ACCGGT 1 cut(s) 88
AgsI TTSAA 5 cut(s) 175, 289, 298, 839, 1090
AjnI CCWGG 2 cut(s) 209, 478
AluBI AGCT 4 cut(s) 32, 334, 499, 1086
AluI AGCT 4 cut(s) 32, 334, 499, 1086
Alw21I GWGCWC 3 cut(s) 34, 139, 718
Alw26I GTCTC 5 cut(s) 47, 493, 674, 725, 1154
AlwI GGATC 2 cut(s) 746, 881
Ama87I CYCGRG 1 cut(s) 335
AoxI GGCC 4 cut(s) 16, 394, 692, 725
ApeKI GCWGC 3 cut(s) 114, 466, 496
ApoI RAATTY 2 cut(s) 995, 1135
AsiGI ACCGGT 1 cut(s) 88
Asp700I GAANNNNTTC 1 cut(s) 798
AspS9I GGNCC 1 cut(s) 692
AsuC2I CCSGG 1 cut(s) 696
AsuHPI GGTGA 5 cut(s) 154, 187, 589, 1046, 1164
AvaI CYCGRG 1 cut(s) 335
BalI TGGCCA 1 cut(s) 727
BanII GRGCYC 1 cut(s) 34
BbsI GAAGAC 1 cut(s) 15
Bbv12I GWGCWC 3 cut(s) 34, 139, 718
BbvI GCAGC 3 cut(s) 101, 453, 508
BccI CCATC 1 cut(s) 299
BceAI ACGGC 1 cut(s) 28
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BciT130I CCWGG 2 cut(s) 211, 480
BclI TGATCA 1 cut(s) 742
BcnI CCSGG 1 cut(s) 696
BcoDI GTCTC 5 cut(s) 47, 493, 674, 725, 1154
BfaI CTAG 2 cut(s) 245, 272
BisI GCNGC 4 cut(s) 16, 115, 467, 497
BlsI GCNGC 4 cut(s) 17, 116, 468, 498
Bme1390I CCNGG 3 cut(s) 211, 480, 696
BmeT110I CYCGRG 1 cut(s) 335
BmgT120I GGNCC 1 cut(s) 692
BmiI GGNNCC 1 cut(s) 440
BmrFI CCNGG 3 cut(s) 211, 480, 696
BmrI ACTGGG 1 cut(s) 142
BmsI GCATC 7 cut(s) 93, 266, 301, 798, 979, 999, 1132
BmuI ACTGGG 1 cut(s) 142
BpiI GAAGAC 1 cut(s) 15
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpmI CTGGAG 1 cut(s) 193
BpuMI CCSGG 1 cut(s) 696
BsaBI GATNNNNATC 1 cut(s) 315
BsaHI GRCGYC 1 cut(s) 60
BsaI GGTCTC 3 cut(s) 493, 674, 725
BsaJI CCNNGG 3 cut(s) 618, 695, 1071
BsaWI WCCGGW 2 cut(s) 88, 343
Bsc4I CCNNNNNNNGG 1 cut(s) 449
Bse118I RCCGGY 1 cut(s) 88
Bse1I ACTGG 7 cut(s) 39, 81, 148, 363, 454, 728, 1182
Bse3DI GCAATG 2 cut(s) 397, 815
Bse8I GATNNNNATC 1 cut(s) 315
BseBI CCWGG 2 cut(s) 211, 480
BseDI CCNNGG 3 cut(s) 618, 695, 1071
BseGI GGATG 2 cut(s) 257, 927
BseJI GATNNNNATC 1 cut(s) 315
BseLI CCNNNNNNNGG 1 cut(s) 449
BseMI GCAATG 2 cut(s) 397, 815
BseMII CTCAG 3 cut(s) 600, 685, 839
BseNI ACTGG 7 cut(s) 39, 81, 148, 363, 454, 728, 1182
BseXI GCAGC 3 cut(s) 101, 453, 508
BsgI GTGCAG 1 cut(s) 704
BshFI GGCC 4 cut(s) 18, 396, 694, 727
BshTI ACCGGT 1 cut(s) 88
BsiHKAI GWGCWC 3 cut(s) 34, 139, 718
BsiHKCI CYCGRG 1 cut(s) 335
BsiSI CCGG 3 cut(s) 89, 344, 695
BslI CCNNNNNNNGG 1 cut(s) 449
BsmAI GTCTC 5 cut(s) 47, 493, 674, 725, 1154
BsmI GAATGC 1 cut(s) 845
BsnI GGCC 4 cut(s) 18, 396, 694, 727
Bso31I GGTCTC 3 cut(s) 493, 674, 725
BsoBI CYCGRG 1 cut(s) 335
Bsp1286I GDGCHC 3 cut(s) 34, 139, 718
Bsp143I GATC 5 cut(s) 517, 742, 751, 886, 1044
BspACI CCGC 4 cut(s) 5, 15, 504, 537
BspANI GGCC 4 cut(s) 18, 396, 694, 727
BspCNI CTCAG 3 cut(s) 601, 684, 838
BspLI GGNNCC 1 cut(s) 440
BspPI GGATC 2 cut(s) 746, 881
BspTNI GGTCTC 3 cut(s) 493, 674, 725
BsrDI GCAATG 2 cut(s) 397, 815
BsrFI RCCGGY 1 cut(s) 88
BsrI ACTGG 7 cut(s) 39, 81, 148, 363, 454, 728, 1182
BssAI RCCGGY 1 cut(s) 88
BssECI CCNNGG 3 cut(s) 618, 695, 1071
BssMI GATC 5 cut(s) 517, 742, 751, 886, 1044
BssNI GRCGYC 1 cut(s) 60
BssT1I CCWWGG 1 cut(s) 1071
Bst2UI CCWGG 2 cut(s) 211, 480
Bst4CI ACNGT 3 cut(s) 251, 278, 619
Bst6I CTCTTC 1 cut(s) 496
BstACI GRCGYC 1 cut(s) 60
BstC8I GCNNGC 3 cut(s) 30, 135, 184
BstDEI CTNAG 3 cut(s) 609, 671, 825
BstDSI CCRYGG 1 cut(s) 618
BstF5I GGATG 2 cut(s) 257, 927
BstKTI GATC 5 cut(s) 520, 745, 754, 889, 1047
BstMAI GTCTC 5 cut(s) 47, 493, 674, 725, 1154
BstMBI GATC 5 cut(s) 517, 742, 751, 886, 1044
BstMWI GCNNNNNNNGC 3 cut(s) 120, 320, 817
BstNI CCWGG 2 cut(s) 211, 480
BstSCI CCNGG 3 cut(s) 209, 478, 694
BstV1I GCAGC 3 cut(s) 101, 453, 508
BstV2I GAAGAC 1 cut(s) 15
BsuRI GGCC 4 cut(s) 18, 396, 694, 727
BtgI CCRYGG 1 cut(s) 618
BtsCI GGATG 2 cut(s) 257, 927
BtsIMutI CAGTG 3 cut(s) 45, 721, 1189
Cac8I GCNNGC 3 cut(s) 30, 135, 184
Cfr10I RCCGGY 1 cut(s) 88
Cfr13I GGNCC 1 cut(s) 692
CseI GACGC 1 cut(s) 106
Csp6I GTAC 2 cut(s) 447, 586
CspAI ACCGGT 1 cut(s) 88
CviAII CATG 5 cut(s) 81, 129, 262, 427, 662
CviQI GTAC 2 cut(s) 447, 586
DdeI CTNAG 3 cut(s) 609, 671, 825
DpnI GATC 5 cut(s) 519, 744, 753, 888, 1046
DpnII GATC 5 cut(s) 517, 742, 751, 886, 1044
DraI TTTAAA 1 cut(s) 639
EaeI YGGCCR 1 cut(s) 725
Eam1104I CTCTTC 1 cut(s) 496
EarI CTCTTC 1 cut(s) 496
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 32
Eco130I CCWWGG 1 cut(s) 1071
Eco24I GRGCYC 1 cut(s) 34
Eco31I GGTCTC 3 cut(s) 493, 674, 725
Eco32I GATATC 2 cut(s) 222, 976
Eco53kI GAGCTC 1 cut(s) 32
Eco57I CTGAAG 1 cut(s) 978
Eco88I CYCGRG 1 cut(s) 335
EcoICRI GAGCTC 1 cut(s) 32
EcoRI GAATTC 1 cut(s) 995
EcoRII CCWGG 2 cut(s) 209, 478
EcoRV GATATC 2 cut(s) 222, 976
EcoT14I CCWWGG 1 cut(s) 1071
EcoT38I GRGCYC 1 cut(s) 34
ErhI CCWWGG 1 cut(s) 1071
FaeI CATG 5 cut(s) 84, 132, 265, 430, 665
FatI CATG 5 cut(s) 80, 128, 261, 426, 661
FbaI TGATCA 1 cut(s) 742
Fnu4HI GCNGC 4 cut(s) 16, 115, 467, 497
FokI GGATG 2 cut(s) 244, 934
FriOI GRGCYC 1 cut(s) 34
Fsp4HI GCNGC 4 cut(s) 16, 115, 467, 497
FspBI CTAG 2 cut(s) 245, 272
GluI GCNGC 4 cut(s) 16, 115, 467, 497
GsuI CTGGAG 1 cut(s) 193
HaeIII GGCC 4 cut(s) 18, 396, 694, 727
HapII CCGG 3 cut(s) 89, 344, 695
HgaI GACGC 1 cut(s) 106
Hin1I GRCGYC 1 cut(s) 60
Hin1II CATG 5 cut(s) 84, 132, 265, 430, 665
HinfI GANTC 4 cut(s) 229, 551, 761, 947
HpaII CCGG 3 cut(s) 89, 344, 695
HphI GGTGA 5 cut(s) 154, 187, 589, 1046, 1164
Hpy166II GTNNAC 1 cut(s) 954
Hpy188I TCNGA 1 cut(s) 610
Hpy188III TCNNGA 3 cut(s) 803, 1006, 1105
Hpy8I GTNNAC 1 cut(s) 954
Hpy99I CGWCG 2 cut(s) 59, 62
HpyAV CCTTC 3 cut(s) 283, 922, 1031
HpyCH4III ACNGT 3 cut(s) 251, 278, 619
HpyCH4IV ACGT 2 cut(s) 60, 475
HpyCH4V TGCA 6 cut(s) 123, 390, 721, 1020, 1145, 1193
HpyF10VI GCNNNNNNNGC 3 cut(s) 120, 320, 817
HpyF3I CTNAG 3 cut(s) 609, 671, 825
HpySE526I ACGT 2 cut(s) 60, 475
Hsp92I GRCGYC 1 cut(s) 60
Hsp92II CATG 5 cut(s) 84, 132, 265, 430, 665
Ksp22I TGATCA 1 cut(s) 742
Kzo9I GATC 5 cut(s) 517, 742, 751, 886, 1044
Lsp1109I GCAGC 3 cut(s) 101, 453, 508
LweI GCATC 7 cut(s) 93, 266, 301, 798, 979, 999, 1132
MaeI CTAG 2 cut(s) 245, 272
MaeII ACGT 2 cut(s) 60, 475
MaeIII GTNAC 3 cut(s) 160, 598, 674
MalI GATC 5 cut(s) 519, 744, 753, 888, 1046
MboI GATC 5 cut(s) 517, 742, 751, 886, 1044
MboII GAAGA 2 cut(s) 20, 483
MhlI GDGCHC 3 cut(s) 34, 139, 718
MlsI TGGCCA 1 cut(s) 727
MluCI AATT 7 cut(s) 324, 358, 411, 460, 589, 995, 1135
MluNI TGGCCA 1 cut(s) 727
MlyI GAGTC 1 cut(s) 238
MmeI TCCRAC 1 cut(s) 779
Mox20I TGGCCA 1 cut(s) 727
MroXI GAANNNNTTC 1 cut(s) 798
MscI TGGCCA 1 cut(s) 727
MseI TTAA 3 cut(s) 638, 707, 1116
MslI CAYNNNNRTG 1 cut(s) 987
Msp20I TGGCCA 1 cut(s) 727
MspI CCGG 3 cut(s) 89, 344, 695
MspR9I CCNGG 3 cut(s) 211, 480, 696
Mva1269I GAATGC 1 cut(s) 845
MvaI CCWGG 2 cut(s) 211, 480
MwoI GCNNNNNNNGC 3 cut(s) 120, 320, 817
NciI CCSGG 1 cut(s) 696
NdeII GATC 5 cut(s) 517, 742, 751, 886, 1044
NlaIII CATG 5 cut(s) 84, 132, 265, 430, 665
NlaIV GGNNCC 1 cut(s) 440
NmuCI GTSAC 1 cut(s) 160
PaeR7I CTCGAG 1 cut(s) 335
PctI GAATGC 1 cut(s) 845
PdmI GAANNNNTTC 1 cut(s) 798
PfeI GAWTC 3 cut(s) 551, 761, 947
PflFI GACNNNGTC 1 cut(s) 59
PinAI ACCGGT 1 cut(s) 88
PkrI GCNGC 4 cut(s) 17, 116, 468, 498
PleI GAGTC 1 cut(s) 237
PpsI GAGTC 1 cut(s) 237
PsiI TTATAA 2 cut(s) 24, 570
Psp124BI GAGCTC 1 cut(s) 34
Psp6I CCWGG 2 cut(s) 209, 478
PspGI CCWGG 2 cut(s) 209, 478
PspN4I GGNNCC 1 cut(s) 440
PspPI GGNCC 1 cut(s) 692
PspXI VCTCGAGB 1 cut(s) 335
PsyI GACNNNGTC 1 cut(s) 59
RsaI GTAC 2 cut(s) 448, 587
RsaNI GTAC 2 cut(s) 447, 586
RseI CAYNNNNRTG 1 cut(s) 987
SacI GAGCTC 1 cut(s) 34
SaqAI TTAA 3 cut(s) 638, 707, 1116
SatI GCNGC 4 cut(s) 16, 115, 467, 497
Sau3AI GATC 5 cut(s) 517, 742, 751, 886, 1044
Sau96I GGNCC 1 cut(s) 692
SchI GAGTC 1 cut(s) 238
ScrFI CCNGG 3 cut(s) 211, 480, 696
SduI GDGCHC 3 cut(s) 34, 139, 718
SfaNI GCATC 7 cut(s) 93, 266, 301, 798, 979, 999, 1132
Sfr274I CTCGAG 1 cut(s) 335
SlaI CTCGAG 1 cut(s) 335
SmiMI CAYNNNNRTG 1 cut(s) 987
SmlI CTYRAG 1 cut(s) 335
SmoI CTYRAG 1 cut(s) 335
Sse9I AATT 7 cut(s) 324, 358, 411, 460, 589, 995, 1135
SsiI CCGC 4 cut(s) 5, 15, 504, 537
SspI AATATT 1 cut(s) 376
SspMI CTAG 2 cut(s) 245, 272
SstI GAGCTC 1 cut(s) 34
StyD4I CCNGG 3 cut(s) 209, 478, 694
StyI CCWWGG 1 cut(s) 1071
TaaI ACNGT 3 cut(s) 251, 278, 619
TaiI ACGT 2 cut(s) 63, 478
TaqI TCGA 3 cut(s) 54, 336, 764
TasI AATT 7 cut(s) 324, 358, 411, 460, 589, 995, 1135
TatI WGTACW 1 cut(s) 446
TauI GCSGC 1 cut(s) 18
TfiI GAWTC 3 cut(s) 551, 761, 947
Tru1I TTAA 3 cut(s) 638, 707, 1116
Tru9I TTAA 3 cut(s) 638, 707, 1116
TscAI CASTG 3 cut(s) 52, 728, 1189
TseFI GTSAC 1 cut(s) 160
TseI GCWGC 3 cut(s) 114, 466, 496
Tsp45I GTSAC 1 cut(s) 160
TspDTI ATGAA 2 cut(s) 891, 941
TspRI CASTG 3 cut(s) 52, 728, 1189
Tth111I GACNNNGTC 1 cut(s) 59
XapI RAATTY 2 cut(s) 995, 1135
XhoI CTCGAG 1 cut(s) 335
XmnI GAANNNNTTC 1 cut(s) 798
XspI CTAG 2 cut(s) 245, 272
ZraI GACGTC 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.