F-box kelch-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_3 | PF13917 | 28 - 64 | 6.5e-23 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 233, 422 |
| AcuI | CTGAAG | 4 cut(s) | 74, 218, 321, 414 |
| AfaI | GTAC | 1 cut(s) | 16 |
| AflIII | ACRYGT | 1 cut(s) | 145 |
| AjnI | CCWGG | 1 cut(s) | 112 |
| AluBI | AGCT | 2 cut(s) | 86, 335 |
| AluI | AGCT | 2 cut(s) | 86, 335 |
| Alw26I | GTCTC | 2 cut(s) | 25, 341 |
| AlwI | GGATC | 2 cut(s) | 233, 422 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 380 |
| AoxI | GGCC | 2 cut(s) | 161, 446 |
| ApeKI | GCWGC | 1 cut(s) | 83 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 104 |
| AspS9I | GGNCC | 2 cut(s) | 162, 447 |
| AsuC2I | CCSGG | 1 cut(s) | 451 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 70, 102 |
| BbvI | GCAGC | 1 cut(s) | 95 |
| BciT130I | CCWGG | 1 cut(s) | 114 |
| BciVI | GTATCC | 1 cut(s) | 223 |
| BcnI | CCSGG | 1 cut(s) | 451 |
| BcoDI | GTCTC | 2 cut(s) | 25, 341 |
| BfaI | CTAG | 1 cut(s) | 168 |
| BfuI | GTATCC | 1 cut(s) | 223 |
| BglII | AGATCT | 1 cut(s) | 49 |
| BisI | GCNGC | 1 cut(s) | 84 |
| BlsI | GCNGC | 1 cut(s) | 85 |
| BmcAI | AGTACT | 1 cut(s) | 16 |
| Bme1390I | CCNGG | 2 cut(s) | 114, 451 |
| BmgT120I | GGNCC | 2 cut(s) | 162, 447 |
| BmiI | GGNNCC | 1 cut(s) | 449 |
| BmrFI | CCNGG | 2 cut(s) | 114, 451 |
| BmrI | ACTGGG | 1 cut(s) | 44 |
| BmuI | ACTGGG | 1 cut(s) | 44 |
| BpmI | CTGGAG | 1 cut(s) | 219 |
| BpuEI | CTTGAG | 1 cut(s) | 142 |
| BpuMI | CCSGG | 1 cut(s) | 451 |
| BsaJI | CCNNGG | 2 cut(s) | 113, 449 |
| Bse1I | ACTGG | 1 cut(s) | 39 |
| BseBI | CCWGG | 1 cut(s) | 114 |
| BseDI | CCNNGG | 2 cut(s) | 113, 449 |
| BseMII | CTCAG | 1 cut(s) | 188 |
| BseNI | ACTGG | 1 cut(s) | 39 |
| BseRI | GAGGAG | 1 cut(s) | 452 |
| BseXI | GCAGC | 1 cut(s) | 95 |
| BsgI | GTGCAG | 1 cut(s) | 102 |
| BshFI | GGCC | 2 cut(s) | 163, 448 |
| BsiSI | CCGG | 1 cut(s) | 451 |
| BsmAI | GTCTC | 2 cut(s) | 25, 341 |
| BsnI | GGCC | 2 cut(s) | 163, 448 |
| Bsp143I | GATC | 3 cut(s) | 49, 238, 427 |
| BspANI | GGCC | 2 cut(s) | 163, 448 |
| BspCNI | CTCAG | 1 cut(s) | 187 |
| BspLI | GGNNCC | 1 cut(s) | 449 |
| BspPI | GGATC | 2 cut(s) | 233, 422 |
| BsrI | ACTGG | 1 cut(s) | 39 |
| BssECI | CCNNGG | 2 cut(s) | 113, 449 |
| BssMI | GATC | 3 cut(s) | 49, 238, 427 |
| Bst2UI | CCWGG | 1 cut(s) | 114 |
| Bst4CI | ACNGT | 1 cut(s) | 416 |
| Bst6I | CTCTTC | 1 cut(s) | 252 |
| BstDEI | CTNAG | 1 cut(s) | 174 |
| BstKTI | GATC | 3 cut(s) | 52, 241, 430 |
| BstMAI | GTCTC | 2 cut(s) | 25, 341 |
| BstMBI | GATC | 3 cut(s) | 49, 238, 427 |
| BstNI | CCWGG | 1 cut(s) | 114 |
| BstSCI | CCNGG | 2 cut(s) | 112, 449 |
| BstV1I | GCAGC | 1 cut(s) | 95 |
| BstX2I | RGATCY | 2 cut(s) | 49, 238 |
| BstYI | RGATCY | 2 cut(s) | 49, 238 |
| BsuI | GTATCC | 1 cut(s) | 223 |
| BsuRI | GGCC | 2 cut(s) | 163, 448 |
| BtsI | GCAGTG | 2 cut(s) | 33, 328 |
| BtsIMutI | CAGTG | 2 cut(s) | 33, 328 |
| CaiI | CAGNNNCTG | 1 cut(s) | 380 |
| Cfr13I | GGNCC | 2 cut(s) | 162, 447 |
| Csp6I | GTAC | 1 cut(s) | 15 |
| CviJI | RGCY | 5 cut(s) | 59, 86, 163, 335, 448 |
| CviKI_1 | RGCY | 5 cut(s) | 59, 86, 163, 335, 448 |
| CviQI | GTAC | 1 cut(s) | 15 |
| DdeI | CTNAG | 1 cut(s) | 174 |
| DpnI | GATC | 3 cut(s) | 51, 240, 429 |
| DpnII | GATC | 3 cut(s) | 49, 238, 427 |
| Eam1104I | CTCTTC | 1 cut(s) | 252 |
| EarI | CTCTTC | 1 cut(s) | 252 |
| Eco57I | CTGAAG | 4 cut(s) | 74, 218, 321, 414 |
| EcoO109I | RGGNCCY | 2 cut(s) | 162, 447 |
| EcoRII | CCWGG | 1 cut(s) | 112 |
| FaiI | YATR | 2 cut(s) | 127, 300 |
| Fnu4HI | GCNGC | 1 cut(s) | 84 |
| Fsp4HI | GCNGC | 1 cut(s) | 84 |
| FspBI | CTAG | 1 cut(s) | 168 |
| GluI | GCNGC | 1 cut(s) | 84 |
| GsuI | CTGGAG | 1 cut(s) | 219 |
| HaeIII | GGCC | 2 cut(s) | 163, 448 |
| HapII | CCGG | 1 cut(s) | 451 |
| HindIII | AAGCTT | 1 cut(s) | 333 |
| HinfI | GANTC | 2 cut(s) | 172, 314 |
| HpaII | CCGG | 1 cut(s) | 451 |
| Hpy166II | GTNNAC | 1 cut(s) | 151 |
| Hpy188I | TCNGA | 5 cut(s) | 54, 313, 382, 394, 427 |
| Hpy188III | TCNNGA | 4 cut(s) | 227, 236, 242, 407 |
| Hpy8I | GTNNAC | 1 cut(s) | 151 |
| HpyAV | CCTTC | 4 cut(s) | 49, 199, 389, 438 |
| HpyCH4III | ACNGT | 1 cut(s) | 416 |
| HpyCH4IV | ACGT | 1 cut(s) | 145 |
| HpyCH4V | TGCA | 1 cut(s) | 83 |
| HpyF3I | CTNAG | 1 cut(s) | 174 |
| HpySE526I | ACGT | 1 cut(s) | 145 |
| Kzo9I | GATC | 3 cut(s) | 49, 238, 427 |
| Lsp1109I | GCAGC | 1 cut(s) | 95 |
| MaeI | CTAG | 1 cut(s) | 168 |
| MaeII | ACGT | 1 cut(s) | 145 |
| MaeIII | GTNAC | 2 cut(s) | 210, 370 |
| MalI | GATC | 3 cut(s) | 51, 240, 429 |
| MboI | GATC | 3 cut(s) | 49, 238, 427 |
| MboII | GAAGA | 4 cut(s) | 211, 269, 292, 381 |
| MflI | RGATCY | 2 cut(s) | 49, 238 |
| MluCI | AATT | 1 cut(s) | 460 |
| MlyI | GAGTC | 1 cut(s) | 166 |
| MmeI | TCCRAC | 1 cut(s) | 133 |
| MnlI | CCTC | 4 cut(s) | 175, 285, 430, 447 |
| MroXI | GAANNNNTTC | 1 cut(s) | 104 |
| MseI | TTAA | 1 cut(s) | 463 |
| MslI | CAYNNNNRTG | 1 cut(s) | 130 |
| MspI | CCGG | 1 cut(s) | 451 |
| MspR9I | CCNGG | 2 cut(s) | 114, 451 |
| MvaI | CCWGG | 1 cut(s) | 114 |
| NciI | CCSGG | 1 cut(s) | 451 |
| NdeII | GATC | 3 cut(s) | 49, 238, 427 |
| NlaIV | GGNNCC | 1 cut(s) | 449 |
| NmuCI | GTSAC | 1 cut(s) | 210 |
| PdmI | GAANNNNTTC | 1 cut(s) | 104 |
| PfeI | GAWTC | 1 cut(s) | 314 |
| PkrI | GCNGC | 1 cut(s) | 85 |
| PleI | GAGTC | 1 cut(s) | 166 |
| PpsI | GAGTC | 1 cut(s) | 166 |
| Psp6I | CCWGG | 1 cut(s) | 112 |
| PspGI | CCWGG | 1 cut(s) | 112 |
| PspN4I | GGNNCC | 1 cut(s) | 449 |
| PspPI | GGNCC | 2 cut(s) | 162, 447 |
| PstNI | CAGNNNCTG | 1 cut(s) | 380 |
| PsuI | RGATCY | 2 cut(s) | 49, 238 |
| RsaI | GTAC | 1 cut(s) | 16 |
| RsaNI | GTAC | 1 cut(s) | 15 |
| RseI | CAYNNNNRTG | 1 cut(s) | 130 |
| SaqAI | TTAA | 1 cut(s) | 463 |
| SatI | GCNGC | 1 cut(s) | 84 |
| Sau3AI | GATC | 3 cut(s) | 49, 238, 427 |
| Sau96I | GGNCC | 2 cut(s) | 162, 447 |
| ScaI | AGTACT | 1 cut(s) | 16 |
| SchI | GAGTC | 1 cut(s) | 166 |
| ScrFI | CCNGG | 2 cut(s) | 114, 451 |
| SetI | ASST | 8 cut(s) | 88, 115, 148, 210, 226, 310, 337, 379 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 130 |
| SmlI | CTYRAG | 1 cut(s) | 157 |
| SmoI | CTYRAG | 1 cut(s) | 157 |
| Sse9I | AATT | 1 cut(s) | 460 |
| SspMI | CTAG | 1 cut(s) | 168 |
| StyD4I | CCNGG | 2 cut(s) | 112, 449 |
| TaaI | ACNGT | 1 cut(s) | 416 |
| TaiI | ACGT | 1 cut(s) | 148 |
| TaqI | TCGA | 1 cut(s) | 278 |
| TasI | AATT | 1 cut(s) | 460 |
| TatI | WGTACW | 1 cut(s) | 14 |
| TfiI | GAWTC | 1 cut(s) | 314 |
| Tru1I | TTAA | 1 cut(s) | 463 |
| Tru9I | TTAA | 1 cut(s) | 463 |
| TscAI | CASTG | 2 cut(s) | 33, 328 |
| TseFI | GTSAC | 1 cut(s) | 210 |
| TseI | GCWGC | 1 cut(s) | 83 |
| Tsp45I | GTSAC | 1 cut(s) | 210 |
| TspDTI | ATGAA | 3 cut(s) | 156, 218, 408 |
| TspRI | CASTG | 2 cut(s) | 33, 328 |
| XmnI | GAANNNNTTC | 1 cut(s) | 104 |
| XspI | CTAG | 1 cut(s) | 168 |
| ZrmI | AGTACT | 1 cut(s) | 16 |