Rw5G037340

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000113
Physical Location & Seq
Forward (+)
65735886 .. 65740468
4583 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G037340.1

Sequence Viewer

Length: 1272 bp
ATGGCGGCGGAGGAGGGCGGCGTCTGTAAGCGAGCTCACACCGAGTTCGACGACGGCGAAATCATTTCAGAGATTCTGGCGAGGCTACCGGTCAAATGTGTGATGCGATTCCGGTGCGTATCCAAGTGGTGGAATTCTCTGATCTCCGATCCTTACTTGACTAAGAAGCACTTGAGGTACGCAGAGATGGGCATCACCGAGAACAGCTCCAGGCTCCTTTATTCGATGGACCCTCCGCAATGTCTAGACCACGAGGCATTGAAGGATTTGAAGGATCATAGTGATGTTTATTTTGCCAACAGAGAGCTTGGTCTTCCGGTAATGTTGGCGGGCTACTCCAATTGCTATAAAATTATTGTTGGTAGTTGCAATGGGTTAATATGTATTTTGATTGAAGGAGTCGACTTTATCTTATGGAATCCATGTACTGGATACTCCAAGGTGTTACCAAGGACTCCATTGCCCCTTTTTAATCCACTTGGTTGTTGCAATGGTGGGTTTGGTTATGATTCTGCTACTGATGATTACAAGCTAATAGTGGGGACTAAAGAGATGGGTGAAGAAAATTCCATTCAGGTTTTCACTCTGAAAACGAGTTCATGGAAGGTGCTCCCCATTATCAATGCTCTTAACATCTCAGGTCGGGGGTTGTTTTTGAATGGAGCTTTGCACTGGTTGGCACAGAATCGCCAAACAATTTTGTCTTTTAATTTGGTGGAGGACAAGTTTCATCAGATGATTCCATTACCCTATGATGATGCTTACTTTCGAGGTATGATGATCCATGGAAATTGTCTTTGTGTGTCTAATGTTGGCCACGATGGTCTTAACGCAATATGGTTGATGAAGGAGTATGGGGTCAAGCAATCTTGGACACTTTATATTTCTGCAAGGGCTATTCCTAGAGAGTACGGACACGTCTGCTTGTGGCCTATTTGTATTCTAGAGAGCGGAGAACTTTTGGTTAACAATGGGAGTACAGGTTTCTTGGTGTTATATAATCCAAAGGAAAACACATTCAAGAATGTTACCAAGATTCATGAATTGAATTGTGGAGCTTTAGTTTACAGAGAGACTTTAGTTTCACCAGTAACCGGCACTGTAATTGTCAGCGCTGAACCTGGTCCGGTAGAAGATGCATACTGGAAAAAACGTGAAGCCGATGCTCAGAATGTAGCCCAGCAATCTGTTAATCCACATCCGGAGCAAGTGACCGAGGAATTGAATACTAATGTTGGCCAGCTTGTATCAGAGCAAGATAAGCATCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

423

Amino Acids

47.44

Weight (kDa)

5.73

Isoelectric Point (pI)

30.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 55 3.2e-06 F-box domain
FBA_3 PF08268 115 - 344 1.6e-20 F-box associated beta propeller domain
FBA_1 PF07734 120 - 334 4e-22 F-box associated beta propeller domain
Pec_lyase_N PF04431 379 - 418 2.4e-08 Pectate lyase, N terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 129, 428
AccBSI CCGCTC 1 cut(s) 951
AccI GTMKAC 1 cut(s) 402
AccIII TCCGGA 1 cut(s) 1201
AciI CCGC 6 cut(s) 5, 8, 18, 236, 329, 951
AclWI GGATC 3 cut(s) 143, 282, 775
AcoI YGGCCR 2 cut(s) 814, 1237
AcsI RAATTY 2 cut(s) 133, 565
AcyI GRCGYC 1 cut(s) 21
AfaI GTAC 4 cut(s) 179, 427, 911, 979
AfeI AGCGCT 1 cut(s) 1114
AfiI CCNNNNNNNGG 3 cut(s) 129, 428, 1094
AflIII ACRYGT 1 cut(s) 916
AgeI ACCGGT 1 cut(s) 88
AgsI TTSAA 7 cut(s) 262, 271, 395, 658, 1021, 1048, 1225
AjiI CACGTC 1 cut(s) 919
AjnI CCWGG 2 cut(s) 209, 1120
AluBI AGCT 7 cut(s) 35, 207, 307, 532, 665, 1058, 1243
AluI AGCT 7 cut(s) 35, 207, 307, 532, 665, 1058, 1243
Alw21I GWGCWC 2 cut(s) 37, 612
Alw26I GTCTC 1 cut(s) 1067
AlwI GGATC 3 cut(s) 143, 282, 775
Aor13HI TCCGGA 1 cut(s) 1201
Aor51HI AGCGCT 1 cut(s) 1114
AoxI GGCC 3 cut(s) 814, 929, 1237
ApoI RAATTY 2 cut(s) 133, 565
AsiGI ACCGGT 1 cut(s) 88
AspLEI GCGC 1 cut(s) 1115
AspS9I GGNCC 2 cut(s) 229, 1124
AsuHPI GGTGA 3 cut(s) 187, 569, 1077
AvaII GGWCC 2 cut(s) 229, 1124
BalI TGGCCA 2 cut(s) 816, 1239
BanII GRGCYC 1 cut(s) 37
BauI CACGAG 1 cut(s) 251
BbsI GAAGAC 1 cut(s) 305
Bbv12I GWGCWC 2 cut(s) 37, 612
BccI CCATC 4 cut(s) 181, 220, 547, 815
BceAI ACGGC 1 cut(s) 70
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BciT130I CCWGG 2 cut(s) 211, 1122
BciVI GTATCC 2 cut(s) 130, 425
BcoDI GTCTC 1 cut(s) 1067
BfaI CTAG 3 cut(s) 245, 903, 944
BfoI RGCGCY 1 cut(s) 1116
BfuI GTATCC 2 cut(s) 130, 425
BisI GCNGC 2 cut(s) 6, 19
BlsI GCNGC 2 cut(s) 7, 20
Bme1390I CCNGG 2 cut(s) 211, 1122
Bme18I GGWCC 2 cut(s) 229, 1124
BmgBI CACGTC 1 cut(s) 919
BmgT120I GGNCC 2 cut(s) 229, 1124
BmiI GGNNCC 2 cut(s) 215, 231
BmrFI CCNGG 2 cut(s) 211, 1122
BmsI GCATC 5 cut(s) 93, 201, 748, 1126, 1153
BpiI GAAGAC 1 cut(s) 305
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpmI CTGGAG 1 cut(s) 193
BpuEI CTTGAG 1 cut(s) 193
BsaBI GATNNNNATC 2 cut(s) 191, 1263
BsaHI GRCGYC 1 cut(s) 21
BsaJI CCNNGG 4 cut(s) 438, 449, 784, 1215
BsaWI WCCGGW 5 cut(s) 88, 111, 316, 1126, 1201
BsaXI ACNNNNNCTCC 6 cut(s) 710, 740, 967, 997, 1047, 1077
Bsc4I CCNNNNNNNGG 3 cut(s) 129, 428, 1094
Bse118I RCCGGY 2 cut(s) 88, 1094
Bse1I ACTGG 4 cut(s) 433, 677, 1088, 1148
Bse3DI GCAATG 4 cut(s) 245, 376, 458, 496
Bse8I GATNNNNATC 2 cut(s) 191, 1263
BseAI TCCGGA 1 cut(s) 1201
BseBI CCWGG 2 cut(s) 211, 1122
BseDI CCNNGG 4 cut(s) 438, 449, 784, 1215
BseGI GGATG 1 cut(s) 1198
BseJI GATNNNNATC 2 cut(s) 191, 1263
BseLI CCNNNNNNNGG 3 cut(s) 129, 428, 1094
BseMI GCAATG 4 cut(s) 245, 376, 458, 496
BseMII CTCAG 2 cut(s) 651, 1181
BseNI ACTGG 4 cut(s) 433, 677, 1088, 1148
BseRI GAGGAG 1 cut(s) 26
BseYI CCCAGC 1 cut(s) 1179
BshFI GGCC 3 cut(s) 816, 931, 1239
BshTI ACCGGT 1 cut(s) 88
BsiHKAI GWGCWC 2 cut(s) 37, 612
BsiSI CCGG 6 cut(s) 89, 112, 317, 1095, 1127, 1202
BslFI GGGAC 1 cut(s) 556
BslI CCNNNNNNNGG 3 cut(s) 129, 428, 1094
BsmAI GTCTC 1 cut(s) 1067
BsmFI GGGAC 1 cut(s) 556
BsnI GGCC 3 cut(s) 816, 931, 1239
Bsp1286I GDGCHC 2 cut(s) 37, 612
Bsp13I TCCGGA 1 cut(s) 1201
Bsp143I GATC 4 cut(s) 141, 148, 274, 780
Bsp19I CCATGG 1 cut(s) 784
BspACI CCGC 6 cut(s) 5, 8, 18, 236, 329, 951
BspANI GGCC 3 cut(s) 816, 931, 1239
BspCNI CTCAG 2 cut(s) 650, 1180
BspEI TCCGGA 1 cut(s) 1201
BspHI TCATGA 1 cut(s) 1039
BspLI GGNNCC 2 cut(s) 215, 231
BspPI GGATC 3 cut(s) 143, 282, 775
BsrBI CCGCTC 1 cut(s) 951
BsrDI GCAATG 4 cut(s) 245, 376, 458, 496
BsrFI RCCGGY 2 cut(s) 88, 1094
BsrI ACTGG 4 cut(s) 433, 677, 1088, 1148
BssAI RCCGGY 2 cut(s) 88, 1094
BssECI CCNNGG 4 cut(s) 438, 449, 784, 1215
BssMI GATC 4 cut(s) 141, 148, 274, 780
BssNI GRCGYC 1 cut(s) 21
BssSI CACGAG 1 cut(s) 251
BssT1I CCWWGG 3 cut(s) 438, 449, 784
Bst2BI CACGAG 1 cut(s) 251
Bst2UI CCWGG 2 cut(s) 211, 1122
Bst4CI ACNGT 1 cut(s) 1102
BstACI GRCGYC 1 cut(s) 21
BstC8I GCNNGC 3 cut(s) 33, 331, 1241
BstDEI CTNAG 3 cut(s) 162, 637, 1167
BstDSI CCRYGG 1 cut(s) 784
BstF5I GGATG 1 cut(s) 1198
BstH2I RGCGCY 1 cut(s) 1116
BstHHI GCGC 1 cut(s) 1115
BstKTI GATC 4 cut(s) 144, 151, 277, 783
BstMAI GTCTC 1 cut(s) 1067
BstMBI GATC 4 cut(s) 141, 148, 274, 780
BstMWI GCNNNNNNNGC 1 cut(s) 1261
BstNI CCWGG 2 cut(s) 211, 1122
BstSCI CCNGG 2 cut(s) 209, 1120
BstV2I GAAGAC 1 cut(s) 305
BsuI GTATCC 2 cut(s) 130, 425
BsuRI GGCC 3 cut(s) 816, 931, 1239
BtgI CCRYGG 1 cut(s) 784
BtrI CACGTC 1 cut(s) 919
BtsCI GGATG 1 cut(s) 1198
BtsIMutI CAGTG 2 cut(s) 670, 1098
Cac8I GCNNGC 3 cut(s) 33, 331, 1241
CciI TCATGA 1 cut(s) 1039
CfoI GCGC 1 cut(s) 1115
Cfr10I RCCGGY 2 cut(s) 88, 1094
Cfr13I GGNCC 2 cut(s) 229, 1124
CseI GACGC 1 cut(s) 10
CsiI ACCWGGT 1 cut(s) 1120
Csp6I GTAC 4 cut(s) 178, 426, 910, 978
CspAI ACCGGT 1 cut(s) 88
CviAII CATG 4 cut(s) 423, 600, 785, 1040
CviQI GTAC 4 cut(s) 178, 426, 910, 978
DdeI CTNAG 3 cut(s) 162, 637, 1167
DpnI GATC 4 cut(s) 143, 150, 276, 782
DpnII GATC 4 cut(s) 141, 148, 274, 780
EaeI YGGCCR 2 cut(s) 814, 1237
EciI GGCGGA 1 cut(s) 23
Ecl136II GAGCTC 1 cut(s) 35
Eco130I CCWWGG 3 cut(s) 438, 449, 784
Eco24I GRGCYC 1 cut(s) 37
Eco47I GGWCC 2 cut(s) 229, 1124
Eco47III AGCGCT 1 cut(s) 1114
Eco53kI GAGCTC 1 cut(s) 35
EcoICRI GAGCTC 1 cut(s) 35
EcoRI GAATTC 1 cut(s) 133
EcoRII CCWGG 2 cut(s) 209, 1120
EcoT14I CCWWGG 3 cut(s) 438, 449, 784
EcoT22I ATGCAT 1 cut(s) 1141
EcoT38I GRGCYC 1 cut(s) 37
ErhI CCWWGG 3 cut(s) 438, 449, 784
FaeI CATG 4 cut(s) 426, 603, 788, 1043
FalI AAGNNNNNCTT 2 cut(s) 155, 187
FaqI GGGAC 1 cut(s) 556
FatI CATG 4 cut(s) 422, 599, 784, 1039
FauI CCCGC 1 cut(s) 322
FblI GTMKAC 1 cut(s) 402
Fnu4HI GCNGC 2 cut(s) 6, 19
FokI GGATG 1 cut(s) 1185
FriOI GRGCYC 1 cut(s) 37
Fsp4HI GCNGC 2 cut(s) 6, 19
FspBI CTAG 3 cut(s) 245, 903, 944
GlaI GCGC 1 cut(s) 1114
GluI GCNGC 2 cut(s) 6, 19
GsaI CCCAGC 1 cut(s) 1183
GsuI CTGGAG 1 cut(s) 193
HaeII RGCGCY 1 cut(s) 1116
HaeIII GGCC 3 cut(s) 816, 931, 1239
HapII CCGG 6 cut(s) 89, 112, 317, 1095, 1127, 1202
HgaI GACGC 1 cut(s) 10
HhaI GCGC 1 cut(s) 1115
Hin1I GRCGYC 1 cut(s) 21
Hin1II CATG 4 cut(s) 426, 603, 788, 1043
Hin6I GCGC 1 cut(s) 1113
HinP1I GCGC 1 cut(s) 1113
HincII GTYRAC 2 cut(s) 403, 967
HindII GTYRAC 2 cut(s) 403, 967
HinfI GANTC 9 cut(s) 73, 108, 399, 418, 454, 509, 685, 739, 1036
HpaI GTTAAC 1 cut(s) 967
HpaII CCGG 6 cut(s) 89, 112, 317, 1095, 1127, 1202
HphI GGTGA 3 cut(s) 187, 569, 1077
Hpy166II GTNNAC 3 cut(s) 403, 967, 1066
Hpy188I TCNGA 7 cut(s) 70, 141, 148, 588, 735, 1170, 1252
Hpy188III TCNNGA 5 cut(s) 245, 944, 1021, 1040, 1202
Hpy8I GTNNAC 3 cut(s) 403, 967, 1066
Hpy99I CGWCG 2 cut(s) 53, 56
HpyAV CCTTC 5 cut(s) 256, 265, 389, 598, 841
HpyCH4III ACNGT 1 cut(s) 1102
HpyCH4IV ACGT 2 cut(s) 918, 1153
HpyCH4V TGCA 5 cut(s) 369, 489, 670, 890, 1139
HpyF10VI GCNNNNNNNGC 1 cut(s) 1261
HpyF3I CTNAG 3 cut(s) 162, 637, 1167
HpySE526I ACGT 2 cut(s) 918, 1153
Hsp92I GRCGYC 1 cut(s) 21
Hsp92II CATG 4 cut(s) 426, 603, 788, 1043
HspAI GCGC 1 cut(s) 1113
Kpn2I TCCGGA 1 cut(s) 1201
KspAI GTTAAC 1 cut(s) 967
Kzo9I GATC 4 cut(s) 141, 148, 274, 780
LmnI GCTCC 6 cut(s) 212, 219, 615, 662, 1055, 1204
LweI GCATC 5 cut(s) 93, 201, 748, 1126, 1153
MabI ACCWGGT 1 cut(s) 1120
MaeI CTAG 3 cut(s) 245, 903, 944
MaeII ACGT 2 cut(s) 918, 1153
MaeIII GTNAC 4 cut(s) 444, 1027, 1090, 1210
MalI GATC 4 cut(s) 143, 150, 276, 782
MbiI CCGCTC 1 cut(s) 951
MboI GATC 4 cut(s) 141, 148, 274, 780
MboII GAAGA 3 cut(s) 305, 572, 1145
MfeI CAATTG 1 cut(s) 340
MhlI GDGCHC 2 cut(s) 37, 612
MlsI TGGCCA 2 cut(s) 816, 1239
MluNI TGGCCA 2 cut(s) 816, 1239
MlyI GAGTC 2 cut(s) 408, 448
MnlI CCTC 9 cut(s) 4, 7, 75, 168, 243, 247, 712, 764, 1210
Mox20I TGGCCA 2 cut(s) 816, 1239
Mph1103I ATGCAT 1 cut(s) 1141
MroI TCCGGA 1 cut(s) 1201
MscI TGGCCA 2 cut(s) 816, 1239
MseI TTAA 7 cut(s) 377, 471, 630, 708, 828, 966, 1191
MslI CAYNNNNRTG 1 cut(s) 282
Msp20I TGGCCA 2 cut(s) 816, 1239
MspI CCGG 6 cut(s) 89, 112, 317, 1095, 1127, 1202
MspR9I CCNGG 2 cut(s) 211, 1122
MunI CAATTG 1 cut(s) 340
MvaI CCWGG 2 cut(s) 211, 1122
MwoI GCNNNNNNNGC 1 cut(s) 1261
NcoI CCATGG 1 cut(s) 784
NdeII GATC 4 cut(s) 141, 148, 274, 780
NlaIII CATG 4 cut(s) 426, 603, 788, 1043
NlaIV GGNNCC 2 cut(s) 215, 231
NmuCI GTSAC 1 cut(s) 1210
NsiI ATGCAT 1 cut(s) 1141
PagI TCATGA 1 cut(s) 1039
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PfeI GAWTC 7 cut(s) 73, 108, 418, 509, 685, 739, 1036
PflMI CCANNNNNTGG 2 cut(s) 129, 428
PinAI ACCGGT 1 cut(s) 88
PkrI GCNGC 2 cut(s) 7, 20
PleI GAGTC 2 cut(s) 407, 448
PpsI GAGTC 2 cut(s) 407, 448
Psp124BI GAGCTC 1 cut(s) 37
Psp6I CCWGG 2 cut(s) 209, 1120
PspFI CCCAGC 1 cut(s) 1179
PspGI CCWGG 2 cut(s) 209, 1120
PspN4I GGNNCC 2 cut(s) 215, 231
PspPI GGNCC 2 cut(s) 229, 1124
RsaI GTAC 4 cut(s) 179, 427, 911, 979
RsaNI GTAC 4 cut(s) 178, 426, 910, 978
RseI CAYNNNNRTG 1 cut(s) 282
SacI GAGCTC 1 cut(s) 37
SalI GTCGAC 1 cut(s) 401
SaqAI TTAA 7 cut(s) 377, 471, 630, 708, 828, 966, 1191
SatI GCNGC 2 cut(s) 6, 19
Sau3AI GATC 4 cut(s) 141, 148, 274, 780
Sau96I GGNCC 2 cut(s) 229, 1124
SchI GAGTC 2 cut(s) 408, 448
ScrFI CCNGG 2 cut(s) 211, 1122
SduI GDGCHC 2 cut(s) 37, 612
SexAI ACCWGGT 1 cut(s) 1120
SfaNI GCATC 5 cut(s) 93, 201, 748, 1126, 1153
SinI GGWCC 2 cut(s) 229, 1124
SmiMI CAYNNNNRTG 1 cut(s) 282
SmlI CTYRAG 1 cut(s) 172
SmoI CTYRAG 1 cut(s) 172
SsiI CCGC 6 cut(s) 5, 8, 18, 236, 329, 951
SspMI CTAG 3 cut(s) 245, 903, 944
SstI GAGCTC 1 cut(s) 37
StyD4I CCNGG 2 cut(s) 209, 1120
StyI CCWWGG 3 cut(s) 438, 449, 784
TaaI ACNGT 1 cut(s) 1102
TaiI ACGT 2 cut(s) 921, 1156
TaqI TCGA 4 cut(s) 48, 224, 402, 769
TaqII GACCGA 1 cut(s) 1229
TatI WGTACW 2 cut(s) 425, 977
TauI GCSGC 2 cut(s) 8, 21
TfiI GAWTC 7 cut(s) 73, 108, 418, 509, 685, 739, 1036
Tru1I TTAA 7 cut(s) 377, 471, 630, 708, 828, 966, 1191
Tru9I TTAA 7 cut(s) 377, 471, 630, 708, 828, 966, 1191
TscAI CASTG 2 cut(s) 677, 1105
TseFI GTSAC 1 cut(s) 1210
Tsp45I GTSAC 1 cut(s) 1210
TspDTI ATGAA 5 cut(s) 588, 719, 860, 1028, 1056
TspGWI ACGGA 1 cut(s) 927
TspRI CASTG 2 cut(s) 677, 1105
Van91I CCANNNNNTGG 2 cut(s) 129, 428
VpaK11BI GGWCC 2 cut(s) 229, 1124
XapI RAATTY 2 cut(s) 133, 565
XbaI TCTAGA 2 cut(s) 244, 943
XmiI GTMKAC 1 cut(s) 402
XspI CTAG 3 cut(s) 245, 903, 944
Zsp2I ATGCAT 1 cut(s) 1141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.