Rmu_sc0001027.1_g000023

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001027.1
OG0000113
Physical Location & Seq
Forward (+)
109764 .. 110951
1188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001027.1_g000023.1.cds

Sequence Viewer

Length: 1188 bp
atggcggacggtcagcagcaactcgttctctccgagttgaatgctatcatcgttgagatcctcttgaggctgccggctaaatctttagtccgattccggtgcgtatccaaggcctggcgggacttgatctcggaatcttatttcatcaaaaatcacctcaactcgaagctccttctctcaaccagtcctccccaagccatagactacgcagcactatccaacatcgctagttccaatgaggaagatgatgtcccagttgcaagcagaggggttgactatccggtagataccagacttgtttgtttgaaaattttcgttggttcctgcaatggcctggtatgtttgttattggatttcaattttgtgttatggaacccttgcactagagtgatccagtcattaccaagtcctactcttttcagtaggtataggactgcaatgttttatgggttcggttatgattccgccaccgatgattgcaagatagtagtgggaagttataggtctcttgctagaagtggtcaccgctaccacttcccgaacggggaaggatttaaggaaaccatgattgaggtctttgcactgaaacctggttcttggaggacccttgagagacttgattttgttatgttgattggccagggctgcgttgtaaatggagctctgcattggttaaagcatcagccgtcagaacatggcttaattgtttctaatataatgtgttttgatttagcggaggagaaatttcgggagattgcattcccctgtcctctgaattatgcagagagggattatttctctgtgggaattggagctattagggactgcctgactgtgtacttcgaaccagatgggcttgattatagaatgtgggtgatgaaggagtatggggtcaaagaatcttgggctgaaatcataagaattccttttgaggttttgcctcaagatttaggaatgttgcagcctttgttcatgtttgagaacgatgaagttttgatgactatcaattgggaagtcttggcattgtataatccgaaggaaaatacatttaggaatgtcttcaagactcatgtgatgaatggttggcgacaaataactacttatatagaaactttagtttcaccattgatcggcgctgccccaaacttgtcaaaccaacactgtgagtctttcactacatttgtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

395

Amino Acids

45.03

Weight (kDa)

5.47

Isoelectric Point (pI)

38.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 114
AciI CCGC 5 cut(s) 5, 118, 465, 526, 734
AclWI GGATC 2 cut(s) 52, 385
AcoI YGGCCR 1 cut(s) 637
AcsI RAATTY 3 cut(s) 309, 743, 921
AfaI GTAC 1 cut(s) 839
AfiI CCNNNNNNNGG 3 cut(s) 114, 544, 1130
AgsI TTSAA 4 cut(s) 40, 307, 358, 1063
AjnI CCWGG 4 cut(s) 113, 333, 589, 639
AleI CACNNNNGTG 1 cut(s) 386
AluBI AGCT 3 cut(s) 169, 662, 815
AluI AGCT 3 cut(s) 169, 662, 815
Alw21I GWGCWC 1 cut(s) 664
Alw26I GTCTC 2 cut(s) 510, 607
AlwI GGATC 2 cut(s) 52, 385
AoxI GGCC 3 cut(s) 111, 331, 637
ApeKI GCWGC 6 cut(s) 16, 70, 209, 645, 961, 1136
ApoI RAATTY 3 cut(s) 309, 743, 921
Asp700I GAANNNNTTC 2 cut(s) 311, 1058
AspLEI GCGC 1 cut(s) 1136
AspS9I GGNCC 1 cut(s) 603
AsuHPI GGTGA 4 cut(s) 146, 515, 886, 1113
AsuII TTCGAA 1 cut(s) 843
AvaII GGWCC 1 cut(s) 603
BalI TGGCCA 1 cut(s) 639
BanII GRGCYC 1 cut(s) 664
BbsI GAAGAC 1 cut(s) 1051
Bbv12I GWGCWC 1 cut(s) 664
BbvI GCAGC 6 cut(s) 28, 57, 221, 632, 973, 1123
BccI CCATC 1 cut(s) 845
BceAI ACGGC 1 cut(s) 670
BcgI CGANNNNNNTGC 4 cut(s) 23, 57, 81, 115
BciT130I CCWGG 4 cut(s) 115, 335, 591, 641
BciVI GTATCC 1 cut(s) 115
BcoDI GTCTC 2 cut(s) 510, 607
BfaI CTAG 3 cut(s) 228, 384, 513
BfoI RGCGCY 1 cut(s) 1137
BfuI GTATCC 1 cut(s) 115
BisI GCNGC 6 cut(s) 17, 71, 210, 646, 962, 1137
BlsI GCNGC 6 cut(s) 18, 72, 211, 647, 963, 1138
Bme1390I CCNGG 4 cut(s) 115, 335, 591, 641
Bme18I GGWCC 1 cut(s) 603
BmgT120I GGNCC 1 cut(s) 603
BmiI GGNNCC 3 cut(s) 322, 374, 605
BmrFI CCNGG 4 cut(s) 115, 335, 591, 641
BmrI ACTGGG 1 cut(s) 248
BmsI GCATC 1 cut(s) 688
BmuI ACTGGG 1 cut(s) 248
BpiI GAAGAC 1 cut(s) 1051
Bpu14I TTCGAA 1 cut(s) 843
BpuEI CTTGAG 3 cut(s) 85, 629, 927
BsaBI GATNNNNATC 1 cut(s) 1001
BsaI GGTCTC 1 cut(s) 510
BsaJI CCNNGG 2 cut(s) 108, 640
BsaWI WCCGGW 2 cut(s) 96, 280
BsaXI ACNNNNNCTCC 2 cut(s) 172, 202
Bsc4I CCNNNNNNNGG 3 cut(s) 114, 544, 1130
Bse118I RCCGGY 1 cut(s) 73
Bse1I ACTGG 3 cut(s) 183, 254, 394
Bse3DI GCAATG 2 cut(s) 334, 444
Bse8I GATNNNNATC 1 cut(s) 1001
BseBI CCWGG 4 cut(s) 115, 335, 591, 641
BseDI CCNNGG 2 cut(s) 108, 640
BseJI GATNNNNATC 1 cut(s) 1001
BseLI CCNNNNNNNGG 3 cut(s) 114, 544, 1130
BseMI GCAATG 2 cut(s) 334, 444
BseNI ACTGG 3 cut(s) 183, 254, 394
BseRI GAGGAG 1 cut(s) 752
BseXI GCAGC 6 cut(s) 28, 57, 221, 632, 973, 1123
BshFI GGCC 3 cut(s) 113, 333, 639
BsiHKAI GWGCWC 1 cut(s) 664
BsiSI CCGG 3 cut(s) 74, 97, 281
BslFI GGGAC 3 cut(s) 134, 236, 836
BslI CCNNNNNNNGG 3 cut(s) 114, 544, 1130
BsmAI GTCTC 2 cut(s) 510, 607
BsmFI GGGAC 3 cut(s) 134, 236, 836
BsmI GAATGC 2 cut(s) 46, 758
BsnI GGCC 3 cut(s) 113, 333, 639
Bso31I GGTCTC 1 cut(s) 510
Bsp119I TTCGAA 1 cut(s) 843
Bsp1286I GDGCHC 1 cut(s) 664
Bsp143I GATC 4 cut(s) 57, 126, 390, 1128
BspACI CCGC 5 cut(s) 5, 118, 465, 526, 734
BspANI GGCC 3 cut(s) 113, 333, 639
BspLI GGNNCC 3 cut(s) 322, 374, 605
BspPI GGATC 2 cut(s) 52, 385
BspT104I TTCGAA 1 cut(s) 843
BspTNI GGTCTC 1 cut(s) 510
BsrDI GCAATG 2 cut(s) 334, 444
BsrFI RCCGGY 1 cut(s) 73
BsrI ACTGG 3 cut(s) 183, 254, 394
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 2 cut(s) 108, 640
BssMI GATC 4 cut(s) 57, 126, 390, 1128
BssT1I CCWWGG 1 cut(s) 108
Bst2UI CCWGG 4 cut(s) 115, 335, 591, 641
Bst4CI ACNGT 3 cut(s) 11, 835, 1163
BstBI TTCGAA 1 cut(s) 843
BstC8I GCNNGC 2 cut(s) 75, 262
BstEII GGTNACC 1 cut(s) 521
BstH2I RGCGCY 1 cut(s) 1137
BstHHI GCGC 1 cut(s) 1136
BstKTI GATC 4 cut(s) 60, 129, 393, 1131
BstMAI GTCTC 2 cut(s) 510, 607
BstMBI GATC 4 cut(s) 57, 126, 390, 1128
BstMWI GCNNNNNNNGC 1 cut(s) 645
BstNI CCWGG 4 cut(s) 115, 335, 591, 641
BstPI GGTNACC 1 cut(s) 521
BstSCI CCNGG 4 cut(s) 113, 333, 589, 639
BstV1I GCAGC 6 cut(s) 28, 57, 221, 632, 973, 1123
BstV2I GAAGAC 1 cut(s) 1051
BstX2I RGATCY 1 cut(s) 57
BstYI RGATCY 1 cut(s) 57
BsuI GTATCC 1 cut(s) 115
BsuRI GGCC 3 cut(s) 113, 333, 639
BtgZI GCGATG 1 cut(s) 208
BtsIMutI CAGTG 2 cut(s) 581, 1159
Cac8I GCNNGC 2 cut(s) 75, 262
CfoI GCGC 1 cut(s) 1136
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 1 cut(s) 603
CsiI ACCWGGT 1 cut(s) 589
Csp6I GTAC 1 cut(s) 838
CviAII CATG 4 cut(s) 565, 695, 973, 1070
CviQI GTAC 1 cut(s) 838
DpnI GATC 4 cut(s) 59, 128, 392, 1130
DpnII GATC 4 cut(s) 57, 126, 390, 1128
EaeI YGGCCR 1 cut(s) 637
EciI GGCGGA 2 cut(s) 20, 454
Ecl136II GAGCTC 1 cut(s) 662
Eco130I CCWWGG 1 cut(s) 108
Eco147I AGGCCT 1 cut(s) 113
Eco24I GRGCYC 1 cut(s) 664
Eco31I GGTCTC 1 cut(s) 510
Eco47I GGWCC 1 cut(s) 603
Eco53kI GAGCTC 1 cut(s) 662
Eco91I GGTNACC 1 cut(s) 521
EcoICRI GAGCTC 1 cut(s) 662
EcoO109I RGGNCCY 1 cut(s) 603
EcoO65I GGTNACC 1 cut(s) 521
EcoRI GAATTC 1 cut(s) 921
EcoRII CCWGG 4 cut(s) 113, 333, 589, 639
EcoT14I CCWWGG 1 cut(s) 108
EcoT38I GRGCYC 1 cut(s) 664
ErhI CCWWGG 1 cut(s) 108
FaeI CATG 4 cut(s) 568, 698, 976, 1073
FalI AAGNNNNNCTT 2 cut(s) 910, 942
FaqI GGGAC 3 cut(s) 134, 236, 836
FatI CATG 4 cut(s) 564, 694, 972, 1069
FauI CCCGC 1 cut(s) 111
Fnu4HI GCNGC 6 cut(s) 17, 71, 210, 646, 962, 1137
FriOI GRGCYC 1 cut(s) 664
Fsp4HI GCNGC 6 cut(s) 17, 71, 210, 646, 962, 1137
FspBI CTAG 3 cut(s) 228, 384, 513
GlaI GCGC 1 cut(s) 1135
GluI GCNGC 6 cut(s) 17, 71, 210, 646, 962, 1137
HaeII RGCGCY 1 cut(s) 1137
HaeIII GGCC 3 cut(s) 113, 333, 639
HapII CCGG 3 cut(s) 74, 97, 281
HhaI GCGC 1 cut(s) 1136
Hin1II CATG 4 cut(s) 568, 698, 976, 1073
Hin6I GCGC 1 cut(s) 1134
HinP1I GCGC 1 cut(s) 1134
HincII GTYRAC 1 cut(s) 274
HindII GTYRAC 1 cut(s) 274
HinfI GANTC 6 cut(s) 93, 134, 461, 899, 1066, 1166
HpaII CCGG 3 cut(s) 74, 97, 281
HphI GGTGA 4 cut(s) 146, 515, 886, 1113
Hpy166II GTNNAC 2 cut(s) 274, 838
Hpy188I TCNGA 6 cut(s) 34, 92, 133, 691, 774, 1035
Hpy188III TCNNGA 5 cut(s) 64, 538, 749, 944, 1063
Hpy8I GTNNAC 2 cut(s) 274, 838
HpyAV CCTTC 4 cut(s) 182, 542, 874, 1030
HpyCH4III ACNGT 3 cut(s) 11, 835, 1163
HpyF10VI GCNNNNNNNGC 1 cut(s) 645
Hsp92II CATG 4 cut(s) 568, 698, 976, 1073
HspAI GCGC 1 cut(s) 1134
KroI GCCGGC 1 cut(s) 73
KroNI GCCGGC 1 cut(s) 75
Kzo9I GATC 4 cut(s) 57, 126, 390, 1128
LmnI GCTCC 3 cut(s) 174, 659, 812
Lsp1109I GCAGC 6 cut(s) 28, 57, 221, 632, 973, 1123
LweI GCATC 1 cut(s) 688
MabI ACCWGGT 1 cut(s) 589
MaeI CTAG 3 cut(s) 228, 384, 513
MaeIII GTNAC 1 cut(s) 521
MalI GATC 4 cut(s) 59, 128, 392, 1130
MboI GATC 4 cut(s) 57, 126, 390, 1128
MboII GAAGA 2 cut(s) 254, 1051
MfeI CAATTG 1 cut(s) 1006
MflI RGATCY 1 cut(s) 57
MhlI GDGCHC 1 cut(s) 664
MlsI TGGCCA 1 cut(s) 639
MluCI AATT 8 cut(s) 309, 358, 702, 743, 775, 807, 921, 1006
MluNI TGGCCA 1 cut(s) 639
MlyI GAGTC 2 cut(s) 1060, 1175
MmeI TCCRAC 1 cut(s) 243
Mox20I TGGCCA 1 cut(s) 639
MroNI GCCGGC 1 cut(s) 73
MroXI GAANNNNTTC 2 cut(s) 311, 1058
MscI TGGCCA 1 cut(s) 639
MseI TTAA 3 cut(s) 555, 674, 701
MslI CAYNNNNRTG 1 cut(s) 386
Msp20I TGGCCA 1 cut(s) 639
MspI CCGG 3 cut(s) 74, 97, 281
MspR9I CCNGG 4 cut(s) 115, 335, 591, 641
MunI CAATTG 1 cut(s) 1006
Mva1269I GAATGC 2 cut(s) 46, 758
MvaI CCWGG 4 cut(s) 115, 335, 591, 641
MwoI GCNNNNNNNGC 1 cut(s) 645
NaeI GCCGGC 1 cut(s) 75
NdeII GATC 4 cut(s) 57, 126, 390, 1128
NgoMIV GCCGGC 1 cut(s) 73
NlaIII CATG 4 cut(s) 568, 698, 976, 1073
NlaIV GGNNCC 3 cut(s) 322, 374, 605
NmuCI GTSAC 1 cut(s) 521
NspV TTCGAA 1 cut(s) 843
OliI CACNNNNGTG 1 cut(s) 386
PceI AGGCCT 1 cut(s) 113
PcsI WCGNNNNNNNCGW 1 cut(s) 30
PctI GAATGC 2 cut(s) 46, 758
PdiI GCCGGC 1 cut(s) 75
PdmI GAANNNNTTC 2 cut(s) 311, 1058
PfeI GAWTC 4 cut(s) 93, 134, 461, 899
PflMI CCANNNNNTGG 1 cut(s) 114
PkrI GCNGC 6 cut(s) 18, 72, 211, 647, 963, 1138
PleI GAGTC 2 cut(s) 1060, 1174
PpsI GAGTC 2 cut(s) 1060, 1174
PpuMI RGGWCCY 1 cut(s) 603
Psp124BI GAGCTC 1 cut(s) 664
Psp5II RGGWCCY 1 cut(s) 603
Psp6I CCWGG 4 cut(s) 113, 333, 589, 639
PspEI GGTNACC 1 cut(s) 521
PspGI CCWGG 4 cut(s) 113, 333, 589, 639
PspN4I GGNNCC 3 cut(s) 322, 374, 605
PspPI GGNCC 1 cut(s) 603
PspPPI RGGWCCY 1 cut(s) 603
PsuI RGATCY 1 cut(s) 57
RsaI GTAC 1 cut(s) 839
RsaNI GTAC 1 cut(s) 838
RseI CAYNNNNRTG 1 cut(s) 386
SacI GAGCTC 1 cut(s) 664
SaqAI TTAA 3 cut(s) 555, 674, 701
SatI GCNGC 6 cut(s) 17, 71, 210, 646, 962, 1137
Sau3AI GATC 4 cut(s) 57, 126, 390, 1128
Sau96I GGNCC 1 cut(s) 603
SchI GAGTC 2 cut(s) 1060, 1175
ScrFI CCNGG 4 cut(s) 115, 335, 591, 641
SduI GDGCHC 1 cut(s) 664
SetI ASST 9 cut(s) 159, 171, 428, 506, 576, 592, 664, 817, 936
SexAI ACCWGGT 1 cut(s) 589
SfaNI GCATC 1 cut(s) 688
SfuI TTCGAA 1 cut(s) 843
SinI GGWCC 1 cut(s) 603
SmiMI CAYNNNNRTG 1 cut(s) 386
SmlI CTYRAG 3 cut(s) 64, 608, 942
SmoI CTYRAG 3 cut(s) 64, 608, 942
Sse9I AATT 8 cut(s) 309, 358, 702, 743, 775, 807, 921, 1006
SseBI AGGCCT 1 cut(s) 113
SsiI CCGC 5 cut(s) 5, 118, 465, 526, 734
SspMI CTAG 3 cut(s) 228, 384, 513
SstI GAGCTC 1 cut(s) 664
StuI AGGCCT 1 cut(s) 113
StyD4I CCNGG 4 cut(s) 113, 333, 589, 639
StyI CCWWGG 1 cut(s) 108
TaaI ACNGT 3 cut(s) 11, 835, 1163
TaqI TCGA 2 cut(s) 164, 843
TasI AATT 8 cut(s) 309, 358, 702, 743, 775, 807, 921, 1006
TatI WGTACW 1 cut(s) 837
TfiI GAWTC 4 cut(s) 93, 134, 461, 899
Tru1I TTAA 3 cut(s) 555, 674, 701
Tru9I TTAA 3 cut(s) 555, 674, 701
TscAI CASTG 2 cut(s) 588, 1166
TseFI GTSAC 1 cut(s) 521
TseI GCWGC 6 cut(s) 16, 70, 209, 645, 961, 1136
Tsp45I GTSAC 1 cut(s) 521
TspDTI ATGAA 5 cut(s) 133, 893, 961, 1002, 1091
TspRI CASTG 2 cut(s) 588, 1166
Van91I CCANNNNNTGG 1 cut(s) 114
VpaK11BI GGWCC 1 cut(s) 603
XapI RAATTY 3 cut(s) 309, 743, 921
XmnI GAANNNNTTC 2 cut(s) 311, 1058
XspI CTAG 3 cut(s) 228, 384, 513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.