Rw2G041940

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000113
Physical Location & Seq
Reverse (-)
68188125 .. 68189297
1173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G041940.1

Sequence Viewer

Length: 1173 bp
ATGTCCGATGCTCTCTCCAGTCACTGGCAACACGAACTGGTTCCCTCCGGCCCCGAGTCTCTCGATGATTTCGATGCTATCATCGTCGAGATCCTCTCATGGCTACCTGTCAAATCTTTACTCCGTTTCCGGTGTGTATGCAAGTCATGGCGCGCATTGATCTCCGAGTCTTATTTCATCAAGAAGCACCTCACCCGCACCAAAATGAACACCAGCTTCAAGCTAATCGTGACGAGGGAAGATTTAATTTTCCGATCCATAGAGTACCAAGCATTATTGAACTGTTTAAGTGATGATGGTACTGTTCCGAGCAGAGAGATTGATTTTCCGGAAACGATCTTACCACCGTTTGAAATTGATTATATAGAGACCGTTGGTACTTGCAATGGCCTGATATGTCTACTACTTGACCTGGAACCTTCAACTATTCTGTTATGGAACCCTTGTACTGGAGACTCCCGGGTATTACCACAACCTCCTATTATTCATACACACCCACAGTTTTCCGGATTTGGTTATGATTCCACTACTGATGATTACAAGTTAATACTGGGTGATTGGGATTCTAGTTATGAATCTGTTGTTGTGTTTTCACTGAAAACGGGTTCGTGGAAGAAGCTTCAAAGCCTGAACAAGTATTTTAGGGTGTCTTCTGTTGGGTATTTAGTTAACGAAGCTCTACATTGGGTACTAGATGAACCGTATGAGCAACACATGTTGTGTCCTTCAAGAATAGTGTCATTTGATTTAGCGGAGGACAAATTTCATGAGATTGCATTTCCCTATCCTCCCAATCCTGTAGACAGGCCTGAATTGATTGCCGGAGTTGGAATTCTTAATAATTGCCTAACCCTATACTTCCAAACCATGTATCGCCAAGCTGGGTGCGAGTTTAAGATGTGGGTGATGAAGGAATATGGAGTCAAGGAATCGTGGACTCAAGTCATAAACATCCCTTCAGGGATTCTAGGTGAAGAGTATATATGCATGACATGCATTTCTGAGAATGGTGAAGTTGTGATGCGTTTGAATGGTGTTGGTCCCTTGGCAATGTATAATCCCAAGGAAAAGACATTTAGGATCTTTTCGGACGAATCCCTATTTGATACAACCACTTATGTAGAGAGCTTAGTTTCACCATTAATCGGCAGTACTAATGGGCTAAGCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

390

Amino Acids

44.39

Weight (kDa)

4.82

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 27 - 61 2e-09 F-box domain
F-box-like PF12937 27 - 59 9.6e-08 F-box-like
FBA_1 PF07734 117 - 344 2.2e-21 F-box associated beta propeller domain
FBA_3 PF08268 121 - 363 3.2e-20 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 24
AccI GTMKAC 2 cut(s) 400, 801
AccII CGCG 1 cut(s) 153
AccIII TCCGGA 2 cut(s) 328, 506
AciI CCGC 2 cut(s) 196, 752
AclWI GGATC 3 cut(s) 85, 249, 1088
AcsI RAATTY 2 cut(s) 761, 831
AcuI CTGAAG 1 cut(s) 942
AfaI GTAC 6 cut(s) 266, 301, 379, 448, 690, 1153
AfiI CCNNNNNNNGG 3 cut(s) 24, 449, 1145
AflIII ACRYGT 1 cut(s) 714
AgsI TTSAA 7 cut(s) 220, 280, 353, 423, 623, 729, 1030
AjnI CCWGG 1 cut(s) 411
AluBI AGCT 6 cut(s) 216, 223, 619, 677, 881, 1128
AluI AGCT 6 cut(s) 216, 223, 619, 677, 881, 1128
Alw26I GTCTC 3 cut(s) 63, 362, 447
AlwI GGATC 3 cut(s) 85, 249, 1088
AlwNI CAGNNNCTG 1 cut(s) 24
Ama87I CYCGRG 2 cut(s) 53, 459
Aor13HI TCCGGA 2 cut(s) 328, 506
AoxI GGCC 3 cut(s) 49, 388, 806
ApoI RAATTY 2 cut(s) 761, 831
AseI ATTAAT 1 cut(s) 1142
Asp700I GAANNNNTTC 1 cut(s) 39
AspLEI GCGC 2 cut(s) 153, 155
AspS9I GGNCC 2 cut(s) 50, 1040
AsuC2I CCSGG 2 cut(s) 460, 461
AsuHPI GGTGA 6 cut(s) 184, 566, 916, 983, 1022, 1128
AvaI CYCGRG 2 cut(s) 53, 459
AvaII GGWCC 1 cut(s) 1040
BbsI GAAGAC 1 cut(s) 642
BccI CCATC 1 cut(s) 290
BciT130I CCWGG 1 cut(s) 413
BcnI CCSGG 2 cut(s) 460, 461
BcoDI GTCTC 3 cut(s) 63, 362, 447
BfaI CTAG 3 cut(s) 567, 692, 968
BfmI CTRYAG 1 cut(s) 798
BlpI GCTNAGC 1 cut(s) 1163
BmcAI AGTACT 1 cut(s) 1153
Bme1390I CCNGG 3 cut(s) 413, 460, 461
Bme18I GGWCC 1 cut(s) 1040
BmeT110I CYCGRG 2 cut(s) 53, 459
BmgT120I GGNCC 2 cut(s) 50, 1040
BmiI GGNNCC 5 cut(s) 42, 52, 417, 440, 1042
BmrFI CCNGG 3 cut(s) 413, 460, 461
BmrI ACTGGG 1 cut(s) 560
BmsI GCATC 2 cut(s) 64, 1011
BmuI ACTGGG 1 cut(s) 560
BoxI GACNNNNGTC 1 cut(s) 941
BpiI GAAGAC 1 cut(s) 642
BplI GAGNNNNNCTC 2 cut(s) 80, 112
BpmI CTGGAG 1 cut(s) 471
Bpu1102I GCTNAGC 1 cut(s) 1163
BpuEI CTTGAG 1 cut(s) 924
BpuMI CCSGG 2 cut(s) 460, 461
BsaI GGTCTC 1 cut(s) 362
BsaJI CCNNGG 3 cut(s) 459, 1044, 1062
BsaWI WCCGGW 3 cut(s) 129, 328, 506
Bsc4I CCNNNNNNNGG 3 cut(s) 24, 449, 1145
Bse1I ACTGG 5 cut(s) 18, 29, 42, 454, 555
Bse3DI GCAATG 2 cut(s) 391, 1056
BseAI TCCGGA 2 cut(s) 328, 506
BseBI CCWGG 1 cut(s) 413
BseDI CCNNGG 3 cut(s) 459, 1044, 1062
BseGI GGATG 1 cut(s) 951
BseLI CCNNNNNNNGG 3 cut(s) 24, 449, 1145
BseMI GCAATG 2 cut(s) 391, 1056
BseMII CTCAG 1 cut(s) 993
BseNI ACTGG 5 cut(s) 18, 29, 42, 454, 555
BsePI GCGCGC 1 cut(s) 151
BseYI CCCAGC 1 cut(s) 881
Bsh1236I CGCG 1 cut(s) 153
BshFI GGCC 3 cut(s) 51, 390, 808
BsiHKCI CYCGRG 2 cut(s) 53, 459
BsiSI CCGG 6 cut(s) 48, 130, 329, 460, 507, 822
BslFI GGGAC 1 cut(s) 1026
BslI CCNNNNNNNGG 3 cut(s) 24, 449, 1145
BsmAI GTCTC 3 cut(s) 63, 362, 447
BsmFI GGGAC 1 cut(s) 1026
BsnI GGCC 3 cut(s) 51, 390, 808
Bso31I GGTCTC 1 cut(s) 362
BsoBI CYCGRG 2 cut(s) 53, 459
Bsp13I TCCGGA 2 cut(s) 328, 506
Bsp143I GATC 5 cut(s) 90, 159, 254, 336, 1080
Bsp1720I GCTNAGC 1 cut(s) 1163
BspACI CCGC 2 cut(s) 196, 752
BspANI GGCC 3 cut(s) 51, 390, 808
BspCNI CTCAG 1 cut(s) 994
BspEI TCCGGA 2 cut(s) 328, 506
BspFNI CGCG 1 cut(s) 153
BspHI TCATGA 1 cut(s) 766
BspLI GGNNCC 5 cut(s) 42, 52, 417, 440, 1042
BspPI GGATC 3 cut(s) 85, 249, 1088
BspTNI GGTCTC 1 cut(s) 362
BsrDI GCAATG 2 cut(s) 391, 1056
BsrI ACTGG 5 cut(s) 18, 29, 42, 454, 555
BssECI CCNNGG 3 cut(s) 459, 1044, 1062
BssHII GCGCGC 1 cut(s) 151
BssMI GATC 5 cut(s) 90, 159, 254, 336, 1080
BssT1I CCWWGG 2 cut(s) 1044, 1062
Bst2UI CCWGG 1 cut(s) 413
Bst4CI ACNGT 6 cut(s) 284, 304, 348, 373, 501, 702
Bst6I CTCTTC 1 cut(s) 969
BstAPI GCANNNNNTGC 1 cut(s) 993
BstC8I GCNNGC 1 cut(s) 153
BstDEI CTNAG 3 cut(s) 1002, 1129, 1163
BstF5I GGATG 1 cut(s) 951
BstFNI CGCG 1 cut(s) 153
BstHHI GCGC 2 cut(s) 153, 155
BstKTI GATC 5 cut(s) 93, 162, 257, 339, 1083
BstMAI GTCTC 3 cut(s) 63, 362, 447
BstMBI GATC 5 cut(s) 90, 159, 254, 336, 1080
BstMWI GCNNNNNNNGC 1 cut(s) 993
BstNI CCWGG 1 cut(s) 413
BstNSI RCATGY 2 cut(s) 718, 996
BstPAI GACNNNNGTC 1 cut(s) 941
BstSCI CCNGG 3 cut(s) 411, 458, 459
BstSFI CTRYAG 1 cut(s) 798
BstUI CGCG 1 cut(s) 153
BstV2I GAAGAC 1 cut(s) 642
BstX2I RGATCY 2 cut(s) 90, 1080
BstYI RGATCY 2 cut(s) 90, 1080
BsuRI GGCC 3 cut(s) 51, 390, 808
BtsCI GGATG 1 cut(s) 951
BtsIMutI CAGTG 2 cut(s) 22, 593
Cac8I GCNNGC 1 cut(s) 153
CaiI CAGNNNCTG 1 cut(s) 24
CciI TCATGA 1 cut(s) 766
CfoI GCGC 2 cut(s) 153, 155
Cfr13I GGNCC 2 cut(s) 50, 1040
Cfr9I CCCGGG 1 cut(s) 459
Csp6I GTAC 6 cut(s) 265, 300, 378, 447, 689, 1152
CviAII CATG 7 cut(s) 99, 147, 715, 767, 868, 988, 993
CviQI GTAC 6 cut(s) 265, 300, 378, 447, 689, 1152
DdeI CTNAG 3 cut(s) 1002, 1129, 1163
DpnI GATC 5 cut(s) 92, 161, 256, 338, 1082
DpnII GATC 5 cut(s) 90, 159, 254, 336, 1080
Eam1104I CTCTTC 1 cut(s) 969
EarI CTCTTC 1 cut(s) 969
Eco130I CCWWGG 2 cut(s) 1044, 1062
Eco147I AGGCCT 1 cut(s) 808
Eco31I GGTCTC 1 cut(s) 362
Eco47I GGWCC 1 cut(s) 1040
Eco57I CTGAAG 1 cut(s) 942
Eco88I CYCGRG 2 cut(s) 53, 459
EcoRI GAATTC 1 cut(s) 831
EcoRII CCWGG 1 cut(s) 411
EcoT14I CCWWGG 2 cut(s) 1044, 1062
EcoT22I ATGCAT 2 cut(s) 989, 998
ErhI CCWWGG 2 cut(s) 1044, 1062
FaeI CATG 7 cut(s) 102, 150, 718, 770, 871, 991, 996
FaqI GGGAC 1 cut(s) 1026
FatI CATG 7 cut(s) 98, 146, 714, 766, 867, 987, 992
FauI CCCGC 1 cut(s) 203
FblI GTMKAC 2 cut(s) 400, 801
FokI GGATG 1 cut(s) 938
FspBI CTAG 3 cut(s) 567, 692, 968
GlaI GCGC 2 cut(s) 152, 154
GsaI CCCAGC 1 cut(s) 885
GsuI CTGGAG 1 cut(s) 471
HaeIII GGCC 3 cut(s) 51, 390, 808
HapII CCGG 6 cut(s) 48, 130, 329, 460, 507, 822
HhaI GCGC 2 cut(s) 153, 155
Hin1II CATG 7 cut(s) 102, 150, 718, 770, 871, 991, 996
Hin6I GCGC 2 cut(s) 151, 153
HinP1I GCGC 2 cut(s) 151, 153
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HindIII AAGCTT 1 cut(s) 617
HpaI GTTAAC 1 cut(s) 670
HpaII CCGG 6 cut(s) 48, 130, 329, 460, 507, 822
HphI GGTGA 6 cut(s) 184, 566, 916, 983, 1022, 1128
Hpy166II GTNNAC 4 cut(s) 401, 670, 802, 936
Hpy188I TCNGA 6 cut(s) 7, 166, 254, 309, 1003, 1090
Hpy188III TCNNGA 8 cut(s) 62, 88, 181, 229, 329, 507, 729, 767
Hpy8I GTNNAC 4 cut(s) 401, 670, 802, 936
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 4 cut(s) 429, 735, 904, 966
HpyCH4III ACNGT 6 cut(s) 284, 304, 348, 373, 501, 702
HpyCH4V TGCA 5 cut(s) 141, 384, 776, 987, 996
HpyF10VI GCNNNNNNNGC 1 cut(s) 993
HpyF3I CTNAG 3 cut(s) 1002, 1129, 1163
Hsp92II CATG 7 cut(s) 102, 150, 718, 770, 871, 991, 996
HspAI GCGC 2 cut(s) 151, 153
Kpn2I TCCGGA 2 cut(s) 328, 506
KspAI GTTAAC 1 cut(s) 670
Kzo9I GATC 5 cut(s) 90, 159, 254, 336, 1080
LweI GCATC 2 cut(s) 64, 1011
MaeI CTAG 3 cut(s) 567, 692, 968
MaeIII GTNAC 2 cut(s) 20, 229
MalI GATC 5 cut(s) 92, 161, 256, 338, 1082
MboI GATC 5 cut(s) 90, 159, 254, 336, 1080
MboII GAAGA 4 cut(s) 251, 625, 642, 986
MflI RGATCY 2 cut(s) 90, 1080
MluCI AATT 6 cut(s) 246, 354, 761, 812, 831, 841
MlyI GAGTC 5 cut(s) 65, 176, 449, 930, 931
MmeI TCCRAC 1 cut(s) 808
MnlI CCTC 7 cut(s) 55, 104, 200, 228, 486, 748, 798
Mph1103I ATGCAT 2 cut(s) 989, 998
MroI TCCGGA 2 cut(s) 328, 506
MroXI GAANNNNTTC 1 cut(s) 39
MseI TTAA 7 cut(s) 245, 287, 545, 669, 837, 894, 1142
MslI CAYNNNNRTG 1 cut(s) 203
MspI CCGG 6 cut(s) 48, 130, 329, 460, 507, 822
MspR9I CCNGG 3 cut(s) 413, 460, 461
MvaI CCWGG 1 cut(s) 413
MvnI CGCG 1 cut(s) 153
MwoI GCNNNNNNNGC 1 cut(s) 993
NciI CCSGG 2 cut(s) 460, 461
NdeII GATC 5 cut(s) 90, 159, 254, 336, 1080
NlaIII CATG 7 cut(s) 102, 150, 718, 770, 871, 991, 996
NlaIV GGNNCC 5 cut(s) 42, 52, 417, 440, 1042
NmuCI GTSAC 2 cut(s) 20, 229
NsiI ATGCAT 2 cut(s) 989, 998
NspI RCATGY 2 cut(s) 718, 996
PagI TCATGA 1 cut(s) 766
PauI GCGCGC 1 cut(s) 151
PceI AGGCCT 1 cut(s) 808
PciI ACATGT 1 cut(s) 714
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PdmI GAANNNNTTC 1 cut(s) 39
PfeI GAWTC 6 cut(s) 521, 563, 575, 929, 964, 1094
PflMI CCANNNNNTGG 1 cut(s) 24
PleI GAGTC 5 cut(s) 64, 175, 449, 929, 931
PpsI GAGTC 5 cut(s) 64, 175, 449, 929, 931
PscI ACATGT 1 cut(s) 714
PshAI GACNNNNGTC 1 cut(s) 941
PshBI ATTAAT 1 cut(s) 1142
Psp6I CCWGG 1 cut(s) 411
PspFI CCCAGC 1 cut(s) 881
PspGI CCWGG 1 cut(s) 411
PspN4I GGNNCC 5 cut(s) 42, 52, 417, 440, 1042
PspPI GGNCC 2 cut(s) 50, 1040
PstNI CAGNNNCTG 1 cut(s) 24
PsuI RGATCY 2 cut(s) 90, 1080
PteI GCGCGC 1 cut(s) 151
RsaI GTAC 6 cut(s) 266, 301, 379, 448, 690, 1153
RsaNI GTAC 6 cut(s) 265, 300, 378, 447, 689, 1152
RseI CAYNNNNRTG 1 cut(s) 203
SaqAI TTAA 7 cut(s) 245, 287, 545, 669, 837, 894, 1142
Sau3AI GATC 5 cut(s) 90, 159, 254, 336, 1080
Sau96I GGNCC 2 cut(s) 50, 1040
ScaI AGTACT 1 cut(s) 1153
SchI GAGTC 5 cut(s) 65, 176, 449, 930, 931
ScrFI CCNGG 3 cut(s) 413, 460, 461
SfaNI GCATC 2 cut(s) 64, 1011
SfcI CTRYAG 1 cut(s) 798
SinI GGWCC 1 cut(s) 1040
SmaI CCCGGG 1 cut(s) 461
SmiMI CAYNNNNRTG 1 cut(s) 203
SmlI CTYRAG 1 cut(s) 939
SmoI CTYRAG 1 cut(s) 939
Sse9I AATT 6 cut(s) 246, 354, 761, 812, 831, 841
SseBI AGGCCT 1 cut(s) 808
SsiI CCGC 2 cut(s) 196, 752
SspMI CTAG 3 cut(s) 567, 692, 968
StuI AGGCCT 1 cut(s) 808
StyD4I CCNGG 3 cut(s) 411, 458, 459
StyI CCWWGG 2 cut(s) 1044, 1062
TaaI ACNGT 6 cut(s) 284, 304, 348, 373, 501, 702
TaqI TCGA 3 cut(s) 63, 72, 87
TasI AATT 6 cut(s) 246, 354, 761, 812, 831, 841
TatI WGTACW 2 cut(s) 446, 1151
TfiI GAWTC 6 cut(s) 521, 563, 575, 929, 964, 1094
Tru1I TTAA 7 cut(s) 245, 287, 545, 669, 837, 894, 1142
Tru9I TTAA 7 cut(s) 245, 287, 545, 669, 837, 894, 1142
TscAI CASTG 2 cut(s) 29, 600
TseFI GTSAC 2 cut(s) 20, 229
Tsp45I GTSAC 2 cut(s) 20, 229
TspDTI ATGAA 7 cut(s) 166, 221, 476, 588, 711, 755, 923
TspGWI ACGGA 1 cut(s) 113
TspMI CCCGGG 1 cut(s) 459
TspRI CASTG 2 cut(s) 29, 600
Van91I CCANNNNNTGG 1 cut(s) 24
VpaK11BI GGWCC 1 cut(s) 1040
VspI ATTAAT 1 cut(s) 1142
XapI RAATTY 2 cut(s) 761, 831
XceI RCATGY 2 cut(s) 718, 996
XmaI CCCGGG 1 cut(s) 459
XmiI GTMKAC 2 cut(s) 400, 801
XmnI GAANNNNTTC 1 cut(s) 39
XspI CTAG 3 cut(s) 567, 692, 968
ZrmI AGTACT 1 cut(s) 1153
Zsp2I ATGCAT 2 cut(s) 989, 998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.