FvH4_6g40002

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000113
Physical Location & Seq
Reverse (-)
31591561 .. 31592757
1197 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40002.t1

Sequence Viewer

Length: 1197 bp
ATGGGGGACGGCGATGTGGTGCTTAAACGAGCTCATACCAACCACGGTGAATACGAGGAAGATGTGATCGCGGAGATCCTAGCGAAGCTACCGGTGAAATCCTTAATTCGATTTCGGTGCGTCTGCAAGTCATGGCGTGCTTTGATCTCCGATCCCTATTTTGTGAAGAAACACTTTTCATGGCGTGCTGAGACCTACAAGGTCAATTTCGACCTGCATCCTCCCTTGTTCGTAGACTTGAAAGCTTTGGAAAATATCAAAAATGGTGATGATGTTCAGTTTGCGGTCACTGAGCTGGATTTCCCGGTATCTGAAAGTATCCCCGATCCCGGTTACAGAAGAGTTGTTGGTTCTTGTAATGGCTTGGTATGTGTAGAAGTTGACTTTAAAGCCATTATGTTATGGAACCCTTATACTAGGGACTCCAAGGTTTTACCAACACCTCCTGGAGTTATAAAGAAGTCTTATGGTGGCTGCTACGATTTTTATGGATTAGGATATGATTCTGCTACCGACGACTACAAGGTCATACTGGGCGTCACTTATTATGATGATGCAAATGGTGCTAACAAAATCATGATTCACATCTTTGCACTGAAAACAGGTTCATGGAGGACTGTCCAAGGCATTGATTATGTTGAGTTAGACACGCGGCTGGGGCTGTTTGTAAACGGAGCTCTGCATTGGTTATATAATCTACCCGGAGTGGGCTCAAGAATTTTGCTCTTTGATTTAGGGGAGGAGAAATTTCAGAAGACGGTTCCATTACCCTATGATGACTGGTTGTATGATCCCTTGATTTATAGAAATTGTCTGTGTGTATGCAGTTGCCCAGCTGAATCCAATAGTATCCACATATGGATGATGAAAGAATATGGGGTCAAGGAATCTTGGACTGAACTAGTCCAATTTTCTTTGGATAATTGTGTGCTGGGTCCTGGTGATTATAGGCAATATTTCAAGCCTGTGTGCATTTTCGAGAATGGTGTAGTTTTAATCAATGAGATGGGTAATTATGAACGCCTCGTGGTATTTTCTGATCTAAAGGAGAAGACATTCGAGCATTTTGTTCAGGTCTCGCAGGACTTGGGTATTAGAACAGTCATTTACCGTGAGACATTAGTTTCACCTGATGTCCACACATACAAAACCAACTATGTGAGACTTCTTTATCCATTAACATTAGAATTTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

399

Amino Acids

45.74

Weight (kDa)

5.37

Isoelectric Point (pI)

26.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 56 8.3e-11 F-box domain
F-box-like PF12937 21 - 57 1.2e-07 F-box-like
FBA_3 PF08268 111 - 356 8.3e-22 F-box associated beta propeller domain
FBA_1 PF07734 116 - 369 1e-29 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 455
AasI GACNNNNNNGTC 1 cut(s) 524
Acc36I ACCTGC 1 cut(s) 222
AccI GTMKAC 1 cut(s) 234
AccII CGCG 2 cut(s) 71, 652
AciI CCGC 3 cut(s) 71, 284, 652
AclWI GGATC 4 cut(s) 70, 146, 320, 785
AcsI RAATTY 3 cut(s) 717, 746, 1187
AcyI GRCGYC 1 cut(s) 537
AfiI CCNNNNNNNGG 2 cut(s) 329, 707
AgeI ACCGGT 1 cut(s) 91
AgsI TTSAA 2 cut(s) 241, 961
AhlI ACTAGT 1 cut(s) 901
AjnI CCWGG 2 cut(s) 445, 937
AluBI AGCT 6 cut(s) 32, 88, 245, 295, 677, 836
AluI AGCT 6 cut(s) 32, 88, 245, 295, 677, 836
Alw21I GWGCWC 2 cut(s) 34, 679
Alw26I GTCTC 4 cut(s) 185, 1081, 1109, 1156
AlwI GGATC 4 cut(s) 70, 146, 320, 785
ApeKI GCWGC 1 cut(s) 474
ApoI RAATTY 3 cut(s) 717, 746, 1187
AsiGI ACCGGT 1 cut(s) 91
Asp700I GAANNNNTTC 1 cut(s) 1055
AspS9I GGNCC 1 cut(s) 935
AsuC2I CCSGG 3 cut(s) 305, 330, 702
AsuHPI GGTGA 5 cut(s) 59, 106, 278, 953, 1119
AvaII GGWCC 1 cut(s) 935
BanII GRGCYC 3 cut(s) 34, 679, 713
BauI CACGAG 1 cut(s) 1025
BbsI GAAGAC 2 cut(s) 761, 1058
Bbv12I GWGCWC 2 cut(s) 34, 679
BbvI GCAGC 1 cut(s) 461
BccI CCATC 1 cut(s) 1000
BceAI ACGGC 1 cut(s) 25
BcgI CGANNNNNNTGC 2 cut(s) 99, 133
BciT130I CCWGG 2 cut(s) 447, 939
BciVI GTATCC 2 cut(s) 329, 860
BcnI CCSGG 3 cut(s) 305, 330, 702
BcoDI GTCTC 4 cut(s) 185, 1081, 1109, 1156
BcuI ACTAGT 1 cut(s) 901
BfaI CTAG 3 cut(s) 80, 417, 902
BfuAI ACCTGC 1 cut(s) 222
BfuI GTATCC 2 cut(s) 329, 860
BisI GCNGC 2 cut(s) 475, 653
BlsI GCNGC 2 cut(s) 476, 654
Bme1390I CCNGG 5 cut(s) 305, 330, 447, 702, 939
Bme18I GGWCC 1 cut(s) 935
BmgT120I GGNCC 1 cut(s) 935
BmiI GGNNCC 3 cut(s) 407, 762, 936
BmrFI CCNGG 5 cut(s) 305, 330, 447, 702, 939
BmrI ACTGGG 1 cut(s) 542
BmsI GCATC 2 cut(s) 226, 544
BmuI ACTGGG 1 cut(s) 542
BpiI GAAGAC 2 cut(s) 761, 1058
BpmI CTGGAG 1 cut(s) 468
BpuEI CTTGAG 1 cut(s) 697
BpuMI CCSGG 3 cut(s) 305, 330, 702
BsaBI GATNNNNATC 1 cut(s) 584
BsaHI GRCGYC 1 cut(s) 537
BsaI GGTCTC 2 cut(s) 185, 1081
BsaJI CCNNGG 3 cut(s) 43, 426, 622
BsaWI WCCGGW 1 cut(s) 91
Bsc4I CCNNNNNNNGG 2 cut(s) 329, 707
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 2 cut(s) 537, 785
Bse8I GATNNNNATC 1 cut(s) 584
BseBI CCWGG 2 cut(s) 447, 939
BseDI CCNNGG 3 cut(s) 43, 426, 622
BseGI GGATG 2 cut(s) 217, 867
BseJI GATNNNNATC 1 cut(s) 584
BseLI CCNNNNNNNGG 2 cut(s) 329, 707
BseMII CTCAG 2 cut(s) 180, 282
BseNI ACTGG 2 cut(s) 537, 785
BseRI GAGGAG 1 cut(s) 755
BseXI GCAGC 1 cut(s) 461
BseYI CCCAGC 3 cut(s) 655, 832, 931
Bsh1236I CGCG 2 cut(s) 71, 652
BshTI ACCGGT 1 cut(s) 91
BsiHKAI GWGCWC 2 cut(s) 34, 679
BsiSI CCGG 4 cut(s) 92, 305, 330, 702
BslFI GGGAC 2 cut(s) 20, 434
BslI CCNNNNNNNGG 2 cut(s) 329, 707
BsmAI GTCTC 4 cut(s) 185, 1081, 1109, 1156
BsmFI GGGAC 2 cut(s) 20, 434
Bso31I GGTCTC 2 cut(s) 185, 1081
Bsp1286I GDGCHC 3 cut(s) 34, 679, 713
Bsp143I GATC 7 cut(s) 66, 75, 144, 151, 325, 790, 1039
BspACI CCGC 3 cut(s) 71, 284, 652
BspCNI CTCAG 2 cut(s) 181, 283
BspFNI CGCG 2 cut(s) 71, 652
BspHI TCATGA 1 cut(s) 576
BspLI GGNNCC 3 cut(s) 407, 762, 936
BspMI ACCTGC 1 cut(s) 222
BspPI GGATC 4 cut(s) 70, 146, 320, 785
BspTNI GGTCTC 2 cut(s) 185, 1081
BsrFI RCCGGY 1 cut(s) 91
BsrI ACTGG 2 cut(s) 537, 785
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 3 cut(s) 43, 426, 622
BssMI GATC 7 cut(s) 66, 75, 144, 151, 325, 790, 1039
BssNI GRCGYC 1 cut(s) 537
BssSI CACGAG 1 cut(s) 1025
BssT1I CCWWGG 2 cut(s) 426, 622
Bst2BI CACGAG 1 cut(s) 1025
Bst2UI CCWGG 2 cut(s) 447, 939
Bst4CI ACNGT 5 cut(s) 47, 619, 760, 1102, 1112
Bst6I CTCTTC 1 cut(s) 334
BstACI GRCGYC 1 cut(s) 537
BstAPI GCANNNNNTGC 1 cut(s) 563
BstC8I GCNNGC 2 cut(s) 138, 186
BstDEI CTNAG 2 cut(s) 189, 291
BstDSI CCRYGG 1 cut(s) 43
BstF5I GGATG 2 cut(s) 217, 867
BstFNI CGCG 2 cut(s) 71, 652
BstKTI GATC 7 cut(s) 69, 78, 147, 154, 328, 793, 1042
BstMAI GTCTC 4 cut(s) 185, 1081, 1109, 1156
BstMBI GATC 7 cut(s) 66, 75, 144, 151, 325, 790, 1039
BstMWI GCNNNNNNNGC 2 cut(s) 563, 658
BstNI CCWGG 2 cut(s) 447, 939
BstSCI CCNGG 5 cut(s) 303, 328, 445, 700, 937
BstUI CGCG 2 cut(s) 71, 652
BstV1I GCAGC 1 cut(s) 461
BstV2I GAAGAC 2 cut(s) 761, 1058
BstX2I RGATCY 1 cut(s) 75
BstYI RGATCY 1 cut(s) 75
BsuI GTATCC 2 cut(s) 329, 860
BtgI CCRYGG 1 cut(s) 43
BtgZI GCGATG 1 cut(s) 27
BtsCI GGATG 2 cut(s) 217, 867
BtsIMutI CAGTG 2 cut(s) 288, 593
BveI ACCTGC 1 cut(s) 222
Cac8I GCNNGC 2 cut(s) 138, 186
CciI TCATGA 1 cut(s) 576
Cfr10I RCCGGY 1 cut(s) 91
Cfr13I GGNCC 1 cut(s) 935
CseI GACGC 2 cut(s) 109, 526
CspAI ACCGGT 1 cut(s) 91
CviAII CATG 4 cut(s) 132, 180, 577, 609
DdeI CTNAG 2 cut(s) 189, 291
DpnI GATC 7 cut(s) 68, 77, 146, 153, 327, 792, 1041
DpnII GATC 7 cut(s) 66, 75, 144, 151, 325, 790, 1039
DraI TTTAAA 1 cut(s) 388
DrdI GACNNNNNNGTC 1 cut(s) 524
DseDI GACNNNNNNGTC 1 cut(s) 524
Eam1104I CTCTTC 1 cut(s) 334
EarI CTCTTC 1 cut(s) 334
Ecl136II GAGCTC 2 cut(s) 32, 677
Eco130I CCWWGG 2 cut(s) 426, 622
Eco24I GRGCYC 3 cut(s) 34, 679, 713
Eco31I GGTCTC 2 cut(s) 185, 1081
Eco47I GGWCC 1 cut(s) 935
Eco53kI GAGCTC 2 cut(s) 32, 677
EcoICRI GAGCTC 2 cut(s) 32, 677
EcoO109I RGGNCCY 1 cut(s) 935
EcoRII CCWGG 2 cut(s) 445, 937
EcoT14I CCWWGG 2 cut(s) 426, 622
EcoT38I GRGCYC 3 cut(s) 34, 679, 713
ErhI CCWWGG 2 cut(s) 426, 622
FaeI CATG 4 cut(s) 135, 183, 580, 612
FalI AAGNNNNNCTT 2 cut(s) 158, 190
FaqI GGGAC 2 cut(s) 20, 434
FatI CATG 4 cut(s) 131, 179, 576, 608
FauNDI CATATG 1 cut(s) 857
FblI GTMKAC 1 cut(s) 234
Fnu4HI GCNGC 2 cut(s) 475, 653
FokI GGATG 2 cut(s) 204, 874
FriOI GRGCYC 3 cut(s) 34, 679, 713
Fsp4HI GCNGC 2 cut(s) 475, 653
FspBI CTAG 3 cut(s) 80, 417, 902
GluI GCNGC 2 cut(s) 475, 653
GsaI CCCAGC 3 cut(s) 659, 836, 935
GsuI CTGGAG 1 cut(s) 468
HapII CCGG 4 cut(s) 92, 305, 330, 702
HgaI GACGC 2 cut(s) 109, 526
Hin1I GRCGYC 1 cut(s) 537
Hin1II CATG 4 cut(s) 135, 183, 580, 612
HincII GTYRAC 1 cut(s) 382
HindII GTYRAC 1 cut(s) 382
HindIII AAGCTT 1 cut(s) 243
HinfI GANTC 5 cut(s) 422, 503, 580, 839, 887
HpaII CCGG 4 cut(s) 92, 305, 330, 702
HphI GGTGA 5 cut(s) 59, 106, 278, 953, 1119
Hpy166II GTNNAC 4 cut(s) 235, 382, 670, 1138
Hpy188I TCNGA 4 cut(s) 151, 313, 753, 1039
Hpy188III TCNNGA 3 cut(s) 577, 714, 979
Hpy8I GTNNAC 4 cut(s) 235, 382, 670, 1138
Hpy99I CGWCG 1 cut(s) 518
HpyCH4III ACNGT 5 cut(s) 47, 619, 760, 1102, 1112
HpyCH4V TGCA 7 cut(s) 126, 217, 557, 593, 682, 825, 972
HpyF10VI GCNNNNNNNGC 2 cut(s) 563, 658
HpyF3I CTNAG 2 cut(s) 189, 291
Hsp92I GRCGYC 1 cut(s) 537
Hsp92II CATG 4 cut(s) 135, 183, 580, 612
Kzo9I GATC 7 cut(s) 66, 75, 144, 151, 325, 790, 1039
LmnI GCTCC 1 cut(s) 674
Lsp1109I GCAGC 1 cut(s) 461
LweI GCATC 2 cut(s) 226, 544
MaeI CTAG 3 cut(s) 80, 417, 902
MaeIII GTNAC 3 cut(s) 286, 332, 538
MalI GATC 7 cut(s) 68, 77, 146, 153, 327, 792, 1041
MboI GATC 7 cut(s) 66, 75, 144, 151, 325, 790, 1039
MboII GAAGA 5 cut(s) 71, 178, 351, 766, 1063
MflI RGATCY 1 cut(s) 75
MhlI GDGCHC 3 cut(s) 34, 679, 713
MluCI AATT 9 cut(s) 105, 205, 717, 746, 808, 908, 922, 1012, 1187
MlyI GAGTC 1 cut(s) 416
MnlI CCTC 6 cut(s) 49, 231, 453, 606, 733, 1034
MroXI GAANNNNTTC 1 cut(s) 1055
MseI TTAA 5 cut(s) 24, 104, 387, 995, 1178
MslI CAYNNNNRTG 1 cut(s) 860
MspA1I CMGCKG 1 cut(s) 836
MspI CCGG 4 cut(s) 92, 305, 330, 702
MspR9I CCNGG 5 cut(s) 305, 330, 447, 702, 939
MvaI CCWGG 2 cut(s) 447, 939
MvnI CGCG 2 cut(s) 71, 652
MwoI GCNNNNNNNGC 2 cut(s) 563, 658
NciI CCSGG 3 cut(s) 305, 330, 702
NdeI CATATG 1 cut(s) 857
NdeII GATC 7 cut(s) 66, 75, 144, 151, 325, 790, 1039
NlaIII CATG 4 cut(s) 135, 183, 580, 612
NlaIV GGNNCC 3 cut(s) 407, 762, 936
NmuCI GTSAC 2 cut(s) 286, 538
PagI TCATGA 1 cut(s) 576
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PdmI GAANNNNTTC 1 cut(s) 1055
PfeI GAWTC 4 cut(s) 503, 580, 839, 887
PfoI TCCNGGA 1 cut(s) 445
PinAI ACCGGT 1 cut(s) 91
PkrI GCNGC 2 cut(s) 476, 654
PleI GAGTC 1 cut(s) 416
PpsI GAGTC 1 cut(s) 416
PpuMI RGGWCCY 1 cut(s) 935
PsiI TTATAA 1 cut(s) 455
Psp124BI GAGCTC 2 cut(s) 34, 679
Psp5II RGGWCCY 1 cut(s) 935
Psp6I CCWGG 2 cut(s) 445, 937
PspFI CCCAGC 3 cut(s) 655, 832, 931
PspGI CCWGG 2 cut(s) 445, 937
PspN4I GGNNCC 3 cut(s) 407, 762, 936
PspPI GGNCC 1 cut(s) 935
PspPPI RGGWCCY 1 cut(s) 935
PsuI RGATCY 1 cut(s) 75
PvuII CAGCTG 1 cut(s) 836
RseI CAYNNNNRTG 1 cut(s) 860
SacI GAGCTC 2 cut(s) 34, 679
SaqAI TTAA 5 cut(s) 24, 104, 387, 995, 1178
SatI GCNGC 2 cut(s) 475, 653
Sau3AI GATC 7 cut(s) 66, 75, 144, 151, 325, 790, 1039
Sau96I GGNCC 1 cut(s) 935
SchI GAGTC 1 cut(s) 416
ScrFI CCNGG 5 cut(s) 305, 330, 447, 702, 939
SduI GDGCHC 3 cut(s) 34, 679, 713
SfaNI GCATC 2 cut(s) 226, 544
SinI GGWCC 1 cut(s) 935
SmiMI CAYNNNNRTG 1 cut(s) 860
SmlI CTYRAG 1 cut(s) 712
SmoI CTYRAG 1 cut(s) 712
SpeI ACTAGT 1 cut(s) 901
Sse9I AATT 9 cut(s) 105, 205, 717, 746, 808, 908, 922, 1012, 1187
SsiI CCGC 3 cut(s) 71, 284, 652
SspI AATATT 1 cut(s) 956
SspMI CTAG 3 cut(s) 80, 417, 902
SstI GAGCTC 2 cut(s) 34, 679
StyD4I CCNGG 5 cut(s) 303, 328, 445, 700, 937
StyI CCWWGG 2 cut(s) 426, 622
TaaI ACNGT 5 cut(s) 47, 619, 760, 1102, 1112
TaqI TCGA 4 cut(s) 109, 210, 978, 1059
TasI AATT 9 cut(s) 105, 205, 717, 746, 808, 908, 922, 1012, 1187
TauI GCSGC 1 cut(s) 655
TfiI GAWTC 4 cut(s) 503, 580, 839, 887
Tru1I TTAA 5 cut(s) 24, 104, 387, 995, 1178
Tru9I TTAA 5 cut(s) 24, 104, 387, 995, 1178
TscAI CASTG 2 cut(s) 295, 600
TseFI GTSAC 2 cut(s) 286, 538
TseI GCWGC 1 cut(s) 474
Tsp45I GTSAC 2 cut(s) 286, 538
TspDTI ATGAA 4 cut(s) 168, 597, 881, 1032
TspGWI ACGGA 1 cut(s) 687
TspRI CASTG 2 cut(s) 295, 600
VpaK11BI GGWCC 1 cut(s) 935
XapI RAATTY 3 cut(s) 717, 746, 1187
XmiI GTMKAC 1 cut(s) 234
XmnI GAANNNNTTC 1 cut(s) 1055
XspI CTAG 3 cut(s) 80, 417, 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.