Rw2G041890

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000113
Physical Location & Seq
Reverse (-)
68142128 .. 68143333
1206 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G041890.1

Sequence Viewer

Length: 1206 bp
ATGTCGGACGCACTCTGCACTCGGCTGCAGCAACAAGTAGTTCTCTCCGGTACCGCACCTAGCTCCGAGTCTGTTGATTTAGAATGTGTCATTGTCGACATCCTCTCACGGCTACCGGCCAGATCTCTGCTCCGATTCCGCTGTGTGTGCAAAGCATGGCGGGCCTTGATCTCCGATCCTTATTTCATCAGAAAGCACCTCAGCCGCATCAACACCAAGATCAGCACCAGCTACTGTCTCCTACTCAAAGAACAAATTTTCCGGTCCGCAGAGTACGAAGCAATATTGAAGTGTTTGAGCCATGATGGTCCTCTTCCGAGCAGAAGGCTTCATTTTCCAGTACTTGATTTTCCGGTCCTCTTCCGCCGAAGGTTTGATATTCATAGTTTTTTTATCGTTGGCAGTTGCAATGGCTTGATATGTCTAATGGTTGGTATTGATGCTAGAGAAACCTATACCTTTATGTTATGGAATCCTTGTACTGGAGAAACCCAGGTCCTACCACAAACTCCCCTTCATTCCTTCGAACGATGTTTCTGGGGGTTCGGTTATGATTCAACCACTGATGATTACAAAGTAATACTGGGAAGCTATAAATCTGCTTATGAATTTGTTGTTGTCTTTATGCTAAAAAGGGGTTCATGGAGGAAGCTTGAAAGGCTCAACAAGTATTTCGGGGTGAGTGGGGCAGGGTGTTCAGTTAACGAAGCTTTGCATTGGGTATTGAGGGAACAGGAAGATGGTAGGTTTATTGATTCAAGCATAGTGTCATTTGATTTAGCGGAGGAGAAATTTCATGAGATTCCGTTTCCCTATCCTCCCAATCCGGTGGACAGCCATGAATTGTTTGCCGGAGTTGGAATTCTTAATAATTGCCTAACTCTGGCCTTTCAAACCATGTGTGGCCGACTTGGGTGCAACTTTAAGTTGTGGGTGATGAAGGACTATGGAGTCAAGGAATCTTGGAGTGAAGTCATAAACATCCCGTCAGGGATTGCAAAGGATGAGTATGTGTTCTTCACATGCATTTCTGAGAATGGTGAAGTTTTGGTGCAGCTGAATTTGTTAGGCTCTTTGGAATTATATAATCCGAAGGGAAAGACATTTAGGACTCTCCTGGACTATAGTGGTCACTGGTATGGAGCTGCTACATACATAGAAACTTTAGTTTCACCATTAATGGGCAGTACTGGCGCAATAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

401

Amino Acids

45.59

Weight (kDa)

6.51

Isoelectric Point (pI)

41.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 30 - 64 4.6e-09 F-box domain
F-box-like PF12937 30 - 65 1.7e-08 F-box-like
FBA_3 PF08268 128 - 370 3.6e-22 F-box associated beta propeller domain
FBA_1 PF07734 131 - 335 4.2e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 950
Acc65I GGTACC 1 cut(s) 50
AccB1I GGYRCC 1 cut(s) 50
AccI GTMKAC 1 cut(s) 96
AciI CCGC 7 cut(s) 54, 139, 160, 205, 267, 364, 782
AclWI GGATC 1 cut(s) 170
AcoI YGGCCR 2 cut(s) 117, 904
AcsI RAATTY 5 cut(s) 255, 608, 791, 861, 1060
AfaI GTAC 5 cut(s) 52, 275, 342, 481, 1189
AfiI CCNNNNNNNGG 3 cut(s) 482, 883, 1181
AgsI TTSAA 5 cut(s) 289, 558, 656, 759, 893
AjnI CCWGG 2 cut(s) 492, 1116
AloI GAACNNNNNNTCC 2 cut(s) 243, 275
AluBI AGCT 7 cut(s) 63, 231, 591, 652, 710, 1057, 1145
AluI AGCT 7 cut(s) 63, 231, 591, 652, 710, 1057, 1145
Alw26I GTCTC 1 cut(s) 242
AlwI GGATC 1 cut(s) 170
AlwNI CAGNNNCTG 1 cut(s) 234
AoxI GGCC 4 cut(s) 117, 162, 885, 904
ApeKI GCWGC 4 cut(s) 25, 28, 1054, 1145
ApoI RAATTY 5 cut(s) 255, 608, 791, 861, 1060
AseI ATTAAT 1 cut(s) 1178
Asp718I GGTACC 1 cut(s) 50
AspLEI GCGC 1 cut(s) 1196
AspS9I GGNCC 5 cut(s) 162, 264, 308, 355, 496
AsuHPI GGTGA 4 cut(s) 691, 946, 1052, 1164
AsuII TTCGAA 1 cut(s) 525
AvaII GGWCC 4 cut(s) 264, 308, 355, 496
BanI GGYRCC 1 cut(s) 50
BarI GAAGNNNNNNTAC 2 cut(s) 1001, 1033
BbvCI CCTCAGC 1 cut(s) 200
BbvI GCAGC 4 cut(s) 12, 40, 1066, 1132
BccI CCATC 2 cut(s) 299, 734
BceAI ACGGC 1 cut(s) 125
BcgI CGANNNNNNTGC 2 cut(s) 897, 931
BciT130I CCWGG 2 cut(s) 494, 1118
BcoDI GTCTC 1 cut(s) 242
BfaI CTAG 2 cut(s) 60, 444
BfmI CTRYAG 2 cut(s) 26, 1123
BglII AGATCT 1 cut(s) 122
BisI GCNGC 5 cut(s) 26, 29, 205, 1055, 1146
BlsI GCNGC 5 cut(s) 27, 30, 206, 1056, 1147
BmcAI AGTACT 2 cut(s) 342, 1189
Bme1390I CCNGG 2 cut(s) 494, 1118
Bme18I GGWCC 4 cut(s) 264, 308, 355, 496
BmgT120I GGNCC 5 cut(s) 162, 264, 308, 355, 496
BmiI GGNNCC 1 cut(s) 52
BmrFI CCNGG 2 cut(s) 494, 1118
BmrI ACTGGG 1 cut(s) 593
BmsI GCATC 2 cut(s) 216, 430
BmuI ACTGGG 1 cut(s) 593
BpmI CTGGAG 1 cut(s) 504
Bpu10I CCTNAGC 1 cut(s) 200
Bpu14I TTCGAA 1 cut(s) 525
BsaJI CCNNGG 1 cut(s) 492
BsaWI WCCGGW 4 cut(s) 47, 261, 352, 826
Bsc4I CCNNNNNNNGG 3 cut(s) 482, 883, 1181
Bse118I RCCGGY 1 cut(s) 115
Bse1I ACTGG 5 cut(s) 338, 487, 588, 1139, 1195
Bse3DI GCAATG 1 cut(s) 415
BseBI CCWGG 2 cut(s) 494, 1118
BseDI CCNNGG 1 cut(s) 492
BseGI GGATG 3 cut(s) 99, 981, 1009
BseLI CCNNNNNNNGG 3 cut(s) 482, 883, 1181
BseMI GCAATG 1 cut(s) 415
BseMII CTCAG 2 cut(s) 214, 1023
BseNI ACTGG 5 cut(s) 338, 487, 588, 1139, 1195
BseRI GAGGAG 1 cut(s) 800
BseXI GCAGC 4 cut(s) 12, 40, 1066, 1132
BsgI GTGCAG 1 cut(s) 1073
BshFI GGCC 4 cut(s) 119, 164, 887, 906
BshNI GGYRCC 1 cut(s) 50
BsiSI CCGG 6 cut(s) 48, 116, 262, 353, 827, 852
BslI CCNNNNNNNGG 3 cut(s) 482, 883, 1181
BsmAI GTCTC 1 cut(s) 242
BsnI GGCC 4 cut(s) 119, 164, 887, 906
Bsp119I TTCGAA 1 cut(s) 525
Bsp143I GATC 4 cut(s) 122, 168, 175, 219
BspACI CCGC 7 cut(s) 54, 139, 160, 205, 267, 364, 782
BspANI GGCC 4 cut(s) 119, 164, 887, 906
BspCNI CTCAG 2 cut(s) 213, 1024
BspHI TCATGA 1 cut(s) 796
BspLI GGNNCC 1 cut(s) 52
BspMAI CTGCAG 1 cut(s) 30
BspPI GGATC 1 cut(s) 170
BspT104I TTCGAA 1 cut(s) 525
BspT107I GGYRCC 1 cut(s) 50
BsrDI GCAATG 1 cut(s) 415
BsrFI RCCGGY 1 cut(s) 115
BsrI ACTGG 5 cut(s) 338, 487, 588, 1139, 1195
BssAI RCCGGY 1 cut(s) 115
BssECI CCNNGG 1 cut(s) 492
BssMI GATC 4 cut(s) 122, 168, 175, 219
Bst2UI CCWGG 2 cut(s) 494, 1118
Bst4CI ACNGT 1 cut(s) 236
Bst6I CTCTTC 2 cut(s) 318, 365
BstBI TTCGAA 1 cut(s) 525
BstC8I GCNNGC 1 cut(s) 162
BstDEI CTNAG 2 cut(s) 200, 1032
BstF5I GGATG 3 cut(s) 99, 981, 1009
BstHHI GCGC 1 cut(s) 1196
BstKTI GATC 4 cut(s) 125, 171, 178, 222
BstMAI GTCTC 1 cut(s) 242
BstMBI GATC 4 cut(s) 122, 168, 175, 219
BstMWI GCNNNNNNNGC 4 cut(s) 147, 161, 658, 1191
BstNI CCWGG 2 cut(s) 494, 1118
BstNSI RCATGY 1 cut(s) 1026
BstSCI CCNGG 2 cut(s) 492, 1116
BstSFI CTRYAG 2 cut(s) 26, 1123
BstV1I GCAGC 4 cut(s) 12, 40, 1066, 1132
BstX2I RGATCY 1 cut(s) 122
BstXI CCANNNNNNTGG 1 cut(s) 829
BstYI RGATCY 1 cut(s) 122
BsuRI GGCC 4 cut(s) 119, 164, 887, 906
BtsCI GGATG 3 cut(s) 99, 981, 1009
BtsIMutI CAGTG 2 cut(s) 561, 1132
Cac8I GCNNGC 1 cut(s) 162
CaiI CAGNNNCTG 1 cut(s) 234
CciI TCATGA 1 cut(s) 796
CfoI GCGC 1 cut(s) 1196
Cfr10I RCCGGY 1 cut(s) 115
Cfr13I GGNCC 5 cut(s) 162, 264, 308, 355, 496
CpoI CGGWCCG 1 cut(s) 264
CseI GACGC 1 cut(s) 17
Csp6I GTAC 5 cut(s) 51, 274, 341, 480, 1188
CspI CGGWCCG 1 cut(s) 264
CviAII CATG 7 cut(s) 156, 302, 642, 797, 839, 898, 1023
CviQI GTAC 5 cut(s) 51, 274, 341, 480, 1188
DdeI CTNAG 2 cut(s) 200, 1032
DpnI GATC 4 cut(s) 124, 170, 177, 221
DpnII GATC 4 cut(s) 122, 168, 175, 219
DrdI GACNNNNNNGTC 1 cut(s) 950
DseDI GACNNNNNNGTC 1 cut(s) 950
EaeI YGGCCR 2 cut(s) 117, 904
Eam1104I CTCTTC 2 cut(s) 318, 365
EarI CTCTTC 2 cut(s) 318, 365
EciI GGCGGA 1 cut(s) 353
Eco47I GGWCC 4 cut(s) 264, 308, 355, 496
EcoO109I RGGNCCY 1 cut(s) 496
EcoRI GAATTC 1 cut(s) 861
EcoRII CCWGG 2 cut(s) 492, 1116
EcoT22I ATGCAT 1 cut(s) 1028
FaeI CATG 7 cut(s) 159, 305, 645, 800, 842, 901, 1026
FatI CATG 7 cut(s) 155, 301, 641, 796, 838, 897, 1022
FauI CCCGC 1 cut(s) 153
FblI GTMKAC 1 cut(s) 96
Fnu4HI GCNGC 5 cut(s) 26, 29, 205, 1055, 1146
FokI GGATG 3 cut(s) 86, 968, 1016
Fsp4HI GCNGC 5 cut(s) 26, 29, 205, 1055, 1146
FspBI CTAG 2 cut(s) 60, 444
GlaI GCGC 1 cut(s) 1195
GluI GCNGC 5 cut(s) 26, 29, 205, 1055, 1146
GsuI CTGGAG 1 cut(s) 504
HaeIII GGCC 4 cut(s) 119, 164, 887, 906
HapII CCGG 6 cut(s) 48, 116, 262, 353, 827, 852
HgaI GACGC 1 cut(s) 17
HhaI GCGC 1 cut(s) 1196
Hin1II CATG 7 cut(s) 159, 305, 645, 800, 842, 901, 1026
Hin6I GCGC 1 cut(s) 1194
HinP1I GCGC 1 cut(s) 1194
HincII GTYRAC 2 cut(s) 97, 703
HindII GTYRAC 2 cut(s) 97, 703
HindIII AAGCTT 2 cut(s) 650, 708
HinfI GANTC 9 cut(s) 68, 135, 472, 554, 755, 802, 951, 959, 1111
HpaI GTTAAC 1 cut(s) 703
HpaII CCGG 6 cut(s) 48, 116, 262, 353, 827, 852
HphI GGTGA 4 cut(s) 691, 946, 1052, 1164
Hpy166II GTNNAC 3 cut(s) 97, 703, 832
Hpy188I TCNGA 8 cut(s) 7, 67, 134, 175, 191, 318, 1033, 1092
Hpy188III TCNNGA 1 cut(s) 797
Hpy8I GTNNAC 3 cut(s) 97, 703, 832
HpyAV CCTTC 6 cut(s) 318, 363, 524, 532, 934, 1087
HpyCH4III ACNGT 1 cut(s) 236
HpyCH4V TGCA 9 cut(s) 18, 28, 150, 408, 715, 918, 998, 1026, 1054
HpyF10VI GCNNNNNNNGC 4 cut(s) 147, 161, 658, 1191
HpyF3I CTNAG 2 cut(s) 200, 1032
Hsp92II CATG 7 cut(s) 159, 305, 645, 800, 842, 901, 1026
HspAI GCGC 1 cut(s) 1194
KpnI GGTACC 1 cut(s) 54
KspAI GTTAAC 1 cut(s) 703
Kzo9I GATC 4 cut(s) 122, 168, 175, 219
LmnI GCTCC 3 cut(s) 68, 135, 1142
Lsp1109I GCAGC 4 cut(s) 12, 40, 1066, 1132
LweI GCATC 2 cut(s) 216, 430
MaeI CTAG 2 cut(s) 60, 444
MaeIII GTNAC 1 cut(s) 1130
MalI GATC 4 cut(s) 124, 170, 177, 221
MboI GATC 4 cut(s) 122, 168, 175, 219
MboII GAAGA 4 cut(s) 305, 352, 749, 1009
MflI RGATCY 1 cut(s) 122
MluCI AATT 8 cut(s) 255, 608, 791, 842, 861, 871, 1060, 1079
MlyI GAGTC 3 cut(s) 77, 960, 1105
MmeI TCCRAC 1 cut(s) 838
MnlI CCTC 8 cut(s) 113, 209, 321, 368, 639, 720, 778, 828
Mph1103I ATGCAT 1 cut(s) 1028
MseI TTAA 4 cut(s) 702, 867, 924, 1178
MslI CAYNNNNRTG 1 cut(s) 1137
MspA1I CMGCKG 2 cut(s) 141, 1057
MspI CCGG 6 cut(s) 48, 116, 262, 353, 827, 852
MspR9I CCNGG 2 cut(s) 494, 1118
MvaI CCWGG 2 cut(s) 494, 1118
MwoI GCNNNNNNNGC 4 cut(s) 147, 161, 658, 1191
NdeII GATC 4 cut(s) 122, 168, 175, 219
NlaIII CATG 7 cut(s) 159, 305, 645, 800, 842, 901, 1026
NlaIV GGNNCC 1 cut(s) 52
NmuCI GTSAC 1 cut(s) 1130
NsiI ATGCAT 1 cut(s) 1028
NspI RCATGY 1 cut(s) 1026
NspV TTCGAA 1 cut(s) 525
PagI TCATGA 1 cut(s) 796
PfeI GAWTC 6 cut(s) 135, 472, 554, 755, 802, 959
PfoI TCCNGGA 1 cut(s) 1116
PkrI GCNGC 5 cut(s) 27, 30, 206, 1056, 1147
PleI GAGTC 3 cut(s) 76, 959, 1105
PpsI GAGTC 3 cut(s) 76, 959, 1105
PpuMI RGGWCCY 1 cut(s) 496
PshBI ATTAAT 1 cut(s) 1178
Psp5II RGGWCCY 1 cut(s) 496
Psp6I CCWGG 2 cut(s) 492, 1116
PspGI CCWGG 2 cut(s) 492, 1116
PspN4I GGNNCC 1 cut(s) 52
PspPI GGNCC 5 cut(s) 162, 264, 308, 355, 496
PspPPI RGGWCCY 1 cut(s) 496
PstI CTGCAG 1 cut(s) 30
PstNI CAGNNNCTG 1 cut(s) 234
PsuI RGATCY 1 cut(s) 122
PvuII CAGCTG 1 cut(s) 1057
RsaI GTAC 5 cut(s) 52, 275, 342, 481, 1189
RsaNI GTAC 5 cut(s) 51, 274, 341, 480, 1188
RseI CAYNNNNRTG 1 cut(s) 1137
Rsr2I CGGWCCG 1 cut(s) 264
RsrII CGGWCCG 1 cut(s) 264
SalI GTCGAC 1 cut(s) 95
SaqAI TTAA 4 cut(s) 702, 867, 924, 1178
SatI GCNGC 5 cut(s) 26, 29, 205, 1055, 1146
Sau3AI GATC 4 cut(s) 122, 168, 175, 219
Sau96I GGNCC 5 cut(s) 162, 264, 308, 355, 496
ScaI AGTACT 2 cut(s) 342, 1189
SchI GAGTC 3 cut(s) 77, 960, 1105
ScrFI CCNGG 2 cut(s) 494, 1118
SfaNI GCATC 2 cut(s) 216, 430
SfcI CTRYAG 2 cut(s) 26, 1123
SfuI TTCGAA 1 cut(s) 525
SinI GGWCC 4 cut(s) 264, 308, 355, 496
SmiMI CAYNNNNRTG 1 cut(s) 1137
Sse9I AATT 8 cut(s) 255, 608, 791, 842, 861, 871, 1060, 1079
SsiI CCGC 7 cut(s) 54, 139, 160, 205, 267, 364, 782
SspI AATATT 1 cut(s) 285
SspMI CTAG 2 cut(s) 60, 444
StyD4I CCNGG 2 cut(s) 492, 1116
TaaI ACNGT 1 cut(s) 236
TaqI TCGA 2 cut(s) 96, 525
TasI AATT 8 cut(s) 255, 608, 791, 842, 861, 871, 1060, 1079
TatI WGTACW 3 cut(s) 340, 479, 1187
TauI GCSGC 1 cut(s) 207
TfiI GAWTC 6 cut(s) 135, 472, 554, 755, 802, 959
Tru1I TTAA 4 cut(s) 702, 867, 924, 1178
Tru9I TTAA 4 cut(s) 702, 867, 924, 1178
TscAI CASTG 2 cut(s) 568, 1139
TseFI GTSAC 1 cut(s) 1130
TseI GCWGC 4 cut(s) 25, 28, 1054, 1145
Tsp45I GTSAC 1 cut(s) 1130
TspDTI ATGAA 9 cut(s) 175, 320, 371, 506, 621, 630, 785, 855, 953
TspGWI ACGGA 1 cut(s) 795
TspRI CASTG 2 cut(s) 568, 1139
VpaK11BI GGWCC 4 cut(s) 264, 308, 355, 496
VspI ATTAAT 1 cut(s) 1178
XapI RAATTY 5 cut(s) 255, 608, 791, 861, 1060
XceI RCATGY 1 cut(s) 1026
XmiI GTMKAC 1 cut(s) 96
XspI CTAG 2 cut(s) 60, 444
ZrmI AGTACT 2 cut(s) 342, 1189
Zsp2I ATGCAT 1 cut(s) 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.