FvH4_6g40030

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000113
Physical Location & Seq
Reverse (-)
31611523 .. 31612704
1182 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40030.t1

Sequence Viewer

Length: 1182 bp
ATGTCGGACGGTCTCTGCAGTCGGCCAAAGCAACAACTAGTTGTTTCCGAGTCTCTTGATTTAGAAGGTGTCATTGACGAGATCCTCTCACTGCTGCCGGCCAAATCTCTGCTCCGATTCCGGTGTGTATGCAAAGCATGGCAGGCCCTGATCTCCGATCCTTATTTCATCAGAGAACACCTCAGCTGCATCAACACCAACATCAGCACCAGCTACTCTCTCCTTATCAATGACGAAGAATGTTTCCGATCCGCAGAATGTGAAGCAATATTGGAGCCTGATAATCCTCTTTCGACCAGAAGGCTTGATTTTCCGGTACTTGATCCACCTATCGATGTTTCTGAAATAGATATCATTGGTAGTTGCAATGGCTTGATATGTCTGTTACTTGATTTTGATTGTAAAGGCTGCTTTATGTTATGGAACCCTTGTACTGGAGAATATCATGTGCTACCAAAACCTCCCTTTTATCCTTCCTATCCACGTTTTTGCGGGTTCGGCTATGATTCAACCACTGATGATTACAAACTTTTACTGGGTAGCTATTACTCTGCTAATGAGTTTGTTCTTGTCTTTACTCTCAAAACGGGTTCATGGAGGAAGCTTGAAGGGGTCAATAGCTATTTCGGGGTGGATACGATGGGGTATTGTAAAAAAGGGTGTTTAGTTAACGAAGCCCTCCATTGGGTACTGGCTGAACTGGATAAGTCGGATGACGACGTTGGTTATTTTGCTTCAAAAATAGTGTCGTTTGATTTAGCTGAGGAGACATTTCATGAGATTCCATTCCCGTACCCTCCCAATCCAGTAAACAGGCGCGAATGGAGTGAATTGATTGCTGCAGTTGGAATTCTCGATAATTGCCTAACCCTGGGCTTTCAATCCATCGATGCCTTAGCTGGCCGCAGTCTAAATATGTGGGTGATGAAGGACTATGGAGTTAAGGAATCTTGGACCGAAGTCGTAAACATCCCATCCGGGGTTATAGAAGGAGGGTATAAGTGCATTTCTCAGAATGGTGAAGCTTTGTTCCGTTTGAAAAATAGACACCCCTGGGGCCTGGTAATGTGTAATCCCATGGAGAAGACGTTTAAGATTTTGTTTGGACTTGATGATACAGCTACTTATGTAGAGAGTTTAGTTTCACCATTAATGGGCAGTACTAATGGTGCAAGCTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

394

Amino Acids

44.05

Weight (kDa)

4.66

Isoelectric Point (pI)

40.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 57 1.2e-08 F-box domain
F-box-like PF12937 27 - 57 2.5e-07 F-box-like
FBA_1 PF07734 113 - 326 3.8e-21 F-box associated beta propeller domain
FBA_3 PF08268 116 - 364 2.9e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 819
AciI CCGC 3 cut(s) 252, 492, 904
AclWI GGATC 4 cut(s) 76, 152, 243, 317
AcoI YGGCCR 3 cut(s) 23, 99, 901
AcsI RAATTY 1 cut(s) 849
AfaI GTAC 5 cut(s) 318, 433, 690, 794, 1162
AfiI CCNNNNNNNGG 6 cut(s) 434, 684, 685, 871, 979, 1154
AgsI TTSAA 5 cut(s) 510, 608, 738, 881, 1039
AhlI ACTAGT 1 cut(s) 37
AjnI CCWGG 3 cut(s) 870, 1052, 1059
Alw26I GTCTC 3 cut(s) 17, 57, 761
AlwI GGATC 4 cut(s) 76, 152, 243, 317
AlwNI CAGNNNCTG 1 cut(s) 148
AoxI GGCC 5 cut(s) 23, 99, 144, 901, 1057
ApeKI GCWGC 4 cut(s) 94, 186, 408, 839
ApoI RAATTY 1 cut(s) 849
ArsI GACNNNNNNTTYG 2 cut(s) 731, 763
AseI ATTAAT 1 cut(s) 1151
AspLEI GCGC 1 cut(s) 819
AspS9I GGNCC 3 cut(s) 145, 954, 1057
AsuC2I CCSGG 1 cut(s) 979
AsuHPI GGTGA 3 cut(s) 934, 1031, 1137
AvaII GGWCC 1 cut(s) 954
BbsI GAAGAC 1 cut(s) 1091
BbvCI CCTCAGC 2 cut(s) 182, 762
BbvI GCAGC 4 cut(s) 81, 173, 395, 826
BccI CCATC 3 cut(s) 634, 893, 982
BciT130I CCWGG 3 cut(s) 872, 1054, 1061
BciVI GTATCC 1 cut(s) 628
BcnI CCSGG 1 cut(s) 979
BcoDI GTCTC 3 cut(s) 17, 57, 761
BcuI ACTAGT 1 cut(s) 37
BfaI CTAG 1 cut(s) 38
BfmI CTRYAG 2 cut(s) 16, 840
BfuI GTATCC 1 cut(s) 628
BisI GCNGC 5 cut(s) 95, 187, 409, 840, 904
BlsI GCNGC 5 cut(s) 96, 188, 410, 841, 905
BmcAI AGTACT 1 cut(s) 1162
Bme1390I CCNGG 4 cut(s) 872, 979, 1054, 1061
Bme18I GGWCC 1 cut(s) 954
BmgT120I GGNCC 3 cut(s) 145, 954, 1057
BmiI GGNNCC 3 cut(s) 276, 425, 1058
BmrFI CCNGG 4 cut(s) 872, 979, 1054, 1061
BmrI ACTGGG 1 cut(s) 545
BmsI GCATC 2 cut(s) 198, 880
BmuI ACTGGG 1 cut(s) 545
BoxI GACNNNNGTC 1 cut(s) 959
BpiI GAAGAC 1 cut(s) 1091
BplI GAGNNNNNCTC 4 cut(s) 71, 103, 165, 197
BpmI CTGGAG 1 cut(s) 456
Bpu10I CCTNAGC 3 cut(s) 182, 762, 895
BpuMI CCSGG 1 cut(s) 979
Bsa29I ATCGAT 2 cut(s) 333, 888
BsaI GGTCTC 1 cut(s) 17
BsaJI CCNNGG 6 cut(s) 870, 871, 978, 1052, 1053, 1077
BsaWI WCCGGW 2 cut(s) 120, 313
BsaXI ACNNNNNCTCC 2 cut(s) 1073, 1103
Bsc4I CCNNNNNNNGG 6 cut(s) 434, 684, 685, 871, 979, 1154
Bse118I RCCGGY 1 cut(s) 97
Bse1I ACTGG 5 cut(s) 439, 540, 696, 705, 806
Bse3DI GCAATG 1 cut(s) 373
BseBI CCWGG 3 cut(s) 872, 1054, 1061
BseCI ATCGAT 2 cut(s) 333, 888
BseDI CCNNGG 6 cut(s) 870, 871, 978, 1052, 1053, 1077
BseGI GGATG 3 cut(s) 718, 969, 974
BseLI CCNNNNNNNGG 6 cut(s) 434, 684, 685, 871, 979, 1154
BseMI GCAATG 1 cut(s) 373
BseMII CTCAG 3 cut(s) 196, 753, 1025
BseNI ACTGG 5 cut(s) 439, 540, 696, 705, 806
BseRI GAGGAG 1 cut(s) 779
BseXI GCAGC 4 cut(s) 81, 173, 395, 826
Bsh1236I CGCG 1 cut(s) 819
BshFI GGCC 5 cut(s) 25, 101, 146, 903, 1059
BshVI ATCGAT 2 cut(s) 333, 888
BsiSI CCGG 4 cut(s) 98, 121, 314, 978
BslI CCNNNNNNNGG 6 cut(s) 434, 684, 685, 871, 979, 1154
BsmAI GTCTC 3 cut(s) 17, 57, 761
BsnI GGCC 5 cut(s) 25, 101, 146, 903, 1059
Bso31I GGTCTC 1 cut(s) 17
Bsp143I GATC 5 cut(s) 81, 150, 157, 248, 322
Bsp19I CCATGG 1 cut(s) 1077
BspACI CCGC 3 cut(s) 252, 492, 904
BspANI GGCC 5 cut(s) 25, 101, 146, 903, 1059
BspCNI CTCAG 3 cut(s) 195, 754, 1024
BspDI ATCGAT 2 cut(s) 333, 888
BspFNI CGCG 1 cut(s) 819
BspHI TCATGA 1 cut(s) 775
BspLI GGNNCC 3 cut(s) 276, 425, 1058
BspMAI CTGCAG 2 cut(s) 20, 844
BspPI GGATC 4 cut(s) 76, 152, 243, 317
BspTNI GGTCTC 1 cut(s) 17
BsrDI GCAATG 1 cut(s) 373
BsrFI RCCGGY 1 cut(s) 97
BsrI ACTGG 5 cut(s) 439, 540, 696, 705, 806
BssAI RCCGGY 1 cut(s) 97
BssECI CCNNGG 6 cut(s) 870, 871, 978, 1052, 1053, 1077
BssMI GATC 5 cut(s) 81, 150, 157, 248, 322
BssT1I CCWWGG 1 cut(s) 1077
Bst2UI CCWGG 3 cut(s) 872, 1054, 1061
Bst4CI ACNGT 1 cut(s) 11
BstC8I GCNNGC 4 cut(s) 99, 144, 901, 1174
BstDEI CTNAG 4 cut(s) 182, 762, 895, 1011
BstDSI CCRYGG 1 cut(s) 1077
BstF5I GGATG 3 cut(s) 718, 969, 974
BstFNI CGCG 1 cut(s) 819
BstHHI GCGC 1 cut(s) 819
BstKTI GATC 5 cut(s) 84, 153, 160, 251, 325
BstMAI GTCTC 3 cut(s) 17, 57, 761
BstMBI GATC 5 cut(s) 81, 150, 157, 248, 322
BstMWI GCNNNNNNNGC 2 cut(s) 143, 498
BstNI CCWGG 3 cut(s) 872, 1054, 1061
BstPAI GACNNNNGTC 1 cut(s) 959
BstSCI CCNGG 4 cut(s) 870, 977, 1052, 1059
BstSFI CTRYAG 2 cut(s) 16, 840
BstUI CGCG 1 cut(s) 819
BstV1I GCAGC 4 cut(s) 81, 173, 395, 826
BstV2I GAAGAC 1 cut(s) 1091
BstX2I RGATCY 1 cut(s) 81
BstYI RGATCY 1 cut(s) 81
Bsu15I ATCGAT 2 cut(s) 333, 888
BsuI GTATCC 1 cut(s) 628
BsuRI GGCC 5 cut(s) 25, 101, 146, 903, 1059
BsuTUI ATCGAT 2 cut(s) 333, 888
BtgI CCRYGG 1 cut(s) 1077
BtsCI GGATG 3 cut(s) 718, 969, 974
BtsI GCAGTG 1 cut(s) 89
BtsIMutI CAGTG 2 cut(s) 89, 513
Cac8I GCNNGC 4 cut(s) 99, 144, 901, 1174
CaiI CAGNNNCTG 1 cut(s) 148
CciI TCATGA 1 cut(s) 775
CfoI GCGC 1 cut(s) 819
Cfr10I RCCGGY 1 cut(s) 97
Cfr13I GGNCC 3 cut(s) 145, 954, 1057
ClaI ATCGAT 2 cut(s) 333, 888
Csp6I GTAC 5 cut(s) 317, 432, 689, 793, 1161
CviAII CATG 5 cut(s) 138, 446, 594, 776, 1078
CviQI GTAC 5 cut(s) 317, 432, 689, 793, 1161
DdeI CTNAG 4 cut(s) 182, 762, 895, 1011
DpnI GATC 5 cut(s) 83, 152, 159, 250, 324
DpnII GATC 5 cut(s) 81, 150, 157, 248, 322
EaeI YGGCCR 3 cut(s) 23, 99, 901
Eco130I CCWWGG 1 cut(s) 1077
Eco31I GGTCTC 1 cut(s) 17
Eco32I GATATC 1 cut(s) 352
Eco47I GGWCC 1 cut(s) 954
EcoO109I RGGNCCY 2 cut(s) 145, 1057
EcoRI GAATTC 1 cut(s) 849
EcoRII CCWGG 3 cut(s) 870, 1052, 1059
EcoRV GATATC 1 cut(s) 352
EcoT14I CCWWGG 1 cut(s) 1077
ErhI CCWWGG 1 cut(s) 1077
FaeI CATG 5 cut(s) 141, 449, 597, 779, 1081
FatI CATG 5 cut(s) 137, 445, 593, 775, 1077
FauI CCCGC 1 cut(s) 485
Fnu4HI GCNGC 5 cut(s) 95, 187, 409, 840, 904
FokI GGATG 3 cut(s) 725, 956, 961
Fsp4HI GCNGC 5 cut(s) 95, 187, 409, 840, 904
FspBI CTAG 1 cut(s) 38
GlaI GCGC 1 cut(s) 818
GluI GCNGC 5 cut(s) 95, 187, 409, 840, 904
GsuI CTGGAG 1 cut(s) 456
HaeIII GGCC 5 cut(s) 25, 101, 146, 903, 1059
HapII CCGG 4 cut(s) 98, 121, 314, 978
HhaI GCGC 1 cut(s) 819
Hin1II CATG 5 cut(s) 141, 449, 597, 779, 1081
Hin6I GCGC 1 cut(s) 817
HinP1I GCGC 1 cut(s) 817
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HindIII AAGCTT 3 cut(s) 602, 1023, 1174
HinfI GANTC 5 cut(s) 50, 117, 506, 781, 947
HpaI GTTAAC 1 cut(s) 670
HpaII CCGG 4 cut(s) 98, 121, 314, 978
HphI GGTGA 3 cut(s) 934, 1031, 1137
Hpy166II GTNNAC 3 cut(s) 670, 811, 967
Hpy188I TCNGA 9 cut(s) 7, 49, 116, 157, 173, 248, 343, 712, 1014
Hpy188III TCNNGA 3 cut(s) 56, 776, 854
Hpy8I GTNNAC 3 cut(s) 670, 811, 967
Hpy99I CGWCG 1 cut(s) 722
HpyAV CCTTC 6 cut(s) 59, 294, 483, 602, 922, 983
HpyCH4III ACNGT 1 cut(s) 11
HpyCH4IV ACGT 3 cut(s) 484, 720, 1088
HpyCH4V TGCA 7 cut(s) 18, 132, 189, 366, 842, 1005, 1172
HpyF10VI GCNNNNNNNGC 2 cut(s) 143, 498
HpyF3I CTNAG 4 cut(s) 182, 762, 895, 1011
HpySE526I ACGT 3 cut(s) 484, 720, 1088
Hsp92II CATG 5 cut(s) 141, 449, 597, 779, 1081
HspAI GCGC 1 cut(s) 817
KroI GCCGGC 1 cut(s) 97
KroNI GCCGGC 1 cut(s) 99
KspAI GTTAAC 1 cut(s) 670
Kzo9I GATC 5 cut(s) 81, 150, 157, 248, 322
LmnI GCTCC 2 cut(s) 117, 274
Lsp1109I GCAGC 4 cut(s) 81, 173, 395, 826
LweI GCATC 2 cut(s) 198, 880
MaeI CTAG 1 cut(s) 38
MaeII ACGT 3 cut(s) 484, 720, 1088
MaeIII GTNAC 1 cut(s) 384
MalI GATC 5 cut(s) 83, 152, 159, 250, 324
MboI GATC 5 cut(s) 81, 150, 157, 248, 322
MboII GAAGA 2 cut(s) 248, 1096
MflI RGATCY 1 cut(s) 81
MluCI AATT 3 cut(s) 830, 849, 859
MlyI GAGTC 1 cut(s) 59
MmeI TCCRAC 2 cut(s) 690, 826
MnlI CCTC 9 cut(s) 95, 191, 297, 471, 591, 689, 757, 807, 986
MroNI GCCGGC 1 cut(s) 97
MseI TTAA 4 cut(s) 669, 942, 1092, 1151
MspA1I CMGCKG 1 cut(s) 186
MspI CCGG 4 cut(s) 98, 121, 314, 978
MspR9I CCNGG 4 cut(s) 872, 979, 1054, 1061
MvaI CCWGG 3 cut(s) 872, 1054, 1061
MvnI CGCG 1 cut(s) 819
MwoI GCNNNNNNNGC 2 cut(s) 143, 498
NaeI GCCGGC 1 cut(s) 99
NciI CCSGG 1 cut(s) 979
NcoI CCATGG 1 cut(s) 1077
NdeII GATC 5 cut(s) 81, 150, 157, 248, 322
NgoMIV GCCGGC 1 cut(s) 97
NlaIII CATG 5 cut(s) 141, 449, 597, 779, 1081
NlaIV GGNNCC 3 cut(s) 276, 425, 1058
PagI TCATGA 1 cut(s) 775
PasI CCCWGGG 2 cut(s) 871, 1053
PdiI GCCGGC 1 cut(s) 99
PfeI GAWTC 4 cut(s) 117, 506, 781, 947
PkrI GCNGC 5 cut(s) 96, 188, 410, 841, 905
PleI GAGTC 1 cut(s) 58
PpsI GAGTC 1 cut(s) 58
PshAI GACNNNNGTC 1 cut(s) 959
PshBI ATTAAT 1 cut(s) 1151
Psp6I CCWGG 3 cut(s) 870, 1052, 1059
PspGI CCWGG 3 cut(s) 870, 1052, 1059
PspN4I GGNNCC 3 cut(s) 276, 425, 1058
PspPI GGNCC 3 cut(s) 145, 954, 1057
PstI CTGCAG 2 cut(s) 20, 844
PstNI CAGNNNCTG 1 cut(s) 148
PsuI RGATCY 1 cut(s) 81
PvuII CAGCTG 1 cut(s) 186
RsaI GTAC 5 cut(s) 318, 433, 690, 794, 1162
RsaNI GTAC 5 cut(s) 317, 432, 689, 793, 1161
SaqAI TTAA 4 cut(s) 669, 942, 1092, 1151
SatI GCNGC 5 cut(s) 95, 187, 409, 840, 904
Sau3AI GATC 5 cut(s) 81, 150, 157, 248, 322
Sau96I GGNCC 3 cut(s) 145, 954, 1057
ScaI AGTACT 1 cut(s) 1162
SchI GAGTC 1 cut(s) 59
ScrFI CCNGG 4 cut(s) 872, 979, 1054, 1061
SfaNI GCATC 2 cut(s) 198, 880
SfcI CTRYAG 2 cut(s) 16, 840
SinI GGWCC 1 cut(s) 954
SpeI ACTAGT 1 cut(s) 37
Sse9I AATT 3 cut(s) 830, 849, 859
SsiI CCGC 3 cut(s) 252, 492, 904
SspI AATATT 1 cut(s) 270
SspMI CTAG 1 cut(s) 38
StyD4I CCNGG 4 cut(s) 870, 977, 1052, 1059
StyI CCWWGG 1 cut(s) 1077
TaaI ACNGT 1 cut(s) 11
TaiI ACGT 3 cut(s) 487, 723, 1091
TaqI TCGA 4 cut(s) 293, 333, 855, 888
TaqII GACCGA 1 cut(s) 971
TasI AATT 3 cut(s) 830, 849, 859
TatI WGTACW 2 cut(s) 431, 1160
TauI GCSGC 1 cut(s) 906
TfiI GAWTC 4 cut(s) 117, 506, 781, 947
Tru1I TTAA 4 cut(s) 669, 942, 1092, 1151
Tru9I TTAA 4 cut(s) 669, 942, 1092, 1151
TscAI CASTG 2 cut(s) 96, 520
TseI GCWGC 4 cut(s) 94, 186, 408, 839
TspDTI ATGAA 4 cut(s) 157, 582, 764, 941
TspGWI ACGGA 1 cut(s) 1022
TspRI CASTG 2 cut(s) 96, 520
VpaK11BI GGWCC 1 cut(s) 954
VspI ATTAAT 1 cut(s) 1151
XapI RAATTY 1 cut(s) 849
XspI CTAG 1 cut(s) 38
ZrmI AGTACT 1 cut(s) 1162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.