RchiOBHm_Chr1g0328801

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000113
Physical Location & Seq
Forward (+)
18237679 .. 18240909
3231 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55816

Sequence Viewer

Length: 1233 bp
ATGGCGGACGACGGCGGCGTTCACAAGCGAGCTCTTACCAGTGTCGCCGACCTCGACGGCGTCCTTGATGAGATACTGGCAAGGCTACGGGTCAAATCACTGATGCGATTTCGCTGCGTCTGCAAGTCATGGCGTGCTCTCATCTCCCAGTCTCGTTTTGTCACCAAGCACTTCAACTACGCAAGCAAAGGCTTCACCGAGAACACCTCCAGGCTCTTGATATCAATGAGTCATCTCCAATCCCGAGACTGTGAAGCATCCAAGGACTTATCCCTAGACTGTGAGGCATTGAAGGATGATGGAGATGCTCATCTTGCAATTGGAAAGCTCGAGTTTCCGGTAATGTTCCCTAATTCCAGTCGTAGAAATATTGTGGGTTCTTGCAATGGCCTGATTTGTGTAGAAATTGACCAGAAAGACATGGTGGTATGGAACCCTTGTACTGGACAATCCAATTTGTTGCCAAAACCTACTGATCATTGCATTCCGCAGTTTTCTGGATTTGGTTATGATTCCACTAATGATGATTATAAGGTAGTGAGAGGGTACAATCATAGAGTTAGGGGTTCTGAGGAAACCATGGTTCAGGTCTTTAGTTTAAAATCAGGTTCATGGAGGACCCATGAGGGTCTCGGTTACTTTTTCTTGGCAGGGCCGGCGTGCTTGTTAAATGGTGCTCTGCATTGGCAAGGGACCATAGTTGATGATTTTCATCCAAGAGATTCAAGGATTATCTCGTTTGATTTAGCAGAGGAAAAGTTTCGGGAGATGCTTCCATTGCCCTCTCTGGTTGGGTTTAGATGCGACTTTCTTCCTGGAGATTGTCTTGGTGTATATGAATATAGCATTCTACACGATGAGATCTCCAGGTTTAGAATATGGATGATGAAGGAATATGGGGTCAAGGAATCGTGGACTGAAGTTGCTTCTTTTGATTTACCAAAAGATCATAAATTCTCACTCGTGACGCCTCTGTGCATATTAGAGAATGGTGAAGGTTTGATCGCCAGCAGATATGATTTTCAGTCCTTGGTATTCTATAGCTTCAAGGAACAGACATTTAGGAATGTTTTTAGGACCCACAACAGATGGAAATTTGATGGACTCATTTACAGGGAGACTTTAGTTTCACCAGTCACCAGTGGTATTGCAGACATCTCTAAGATCAACACTATTTGTGGGGAGCTAATTTGTGAGCACCATGATGCTCAAGGAAATCAACAAAATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

410

Amino Acids

46.59

Weight (kDa)

6.07

Isoelectric Point (pI)

38.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 21 - 53 6.2e-08 F-box domain
FBA_3 PF08268 111 - 357 1.8e-24 F-box associated beta propeller domain
FBA_1 PF07734 123 - 356 3.5e-29 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 531
AciI CCGC 3 cut(s) 5, 15, 488
AcsI RAATTY 2 cut(s) 953, 1094
AcuI CTGAAG 1 cut(s) 939
AcyI GRCGYC 2 cut(s) 60, 968
AfaI GTAC 2 cut(s) 442, 548
AfiI CCNNNNNNNGG 1 cut(s) 443
AgsI TTSAA 4 cut(s) 175, 292, 726, 1048
AjnI CCWGG 3 cut(s) 209, 814, 866
AluBI AGCT 4 cut(s) 32, 328, 1044, 1186
AluI AGCT 4 cut(s) 32, 328, 1044, 1186
Alw21I GWGCWC 4 cut(s) 34, 139, 679, 1200
Alw26I GTCTC 4 cut(s) 156, 240, 635, 1112
Ama87I CYCGRG 2 cut(s) 243, 329
AoxI GGCC 2 cut(s) 388, 653
ApeKI GCWGC 1 cut(s) 114
ApoI RAATTY 2 cut(s) 953, 1094
Asp700I GAANNNNTTC 1 cut(s) 759
AspS9I GGNCC 4 cut(s) 618, 653, 693, 1077
AsuHPI GGTGA 5 cut(s) 154, 187, 1004, 1122, 1129
AvaI CYCGRG 2 cut(s) 243, 329
AvaII GGWCC 3 cut(s) 618, 693, 1077
BanII GRGCYC 1 cut(s) 34
BauI CACGAG 1 cut(s) 962
Bbv12I GWGCWC 4 cut(s) 34, 139, 679, 1200
BbvI GCAGC 1 cut(s) 101
BccI CCATC 3 cut(s) 293, 1083, 1094
BceAI ACGGC 2 cut(s) 28, 73
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BciT130I CCWGG 3 cut(s) 211, 816, 868
BclI TGATCA 1 cut(s) 475
BcoDI GTCTC 4 cut(s) 156, 240, 635, 1112
BfaI CTAG 1 cut(s) 275
BfmI CTRYAG 1 cut(s) 1039
BglII AGATCT 1 cut(s) 861
BisI GCNGC 2 cut(s) 16, 115
BlsI GCNGC 2 cut(s) 17, 116
Bme1390I CCNGG 3 cut(s) 211, 816, 868
Bme18I GGWCC 3 cut(s) 618, 693, 1077
BmeT110I CYCGRG 2 cut(s) 243, 329
BmgT120I GGNCC 4 cut(s) 618, 653, 693, 1077
BmiI GGNNCC 4 cut(s) 434, 620, 694, 1079
BmrFI CCNGG 3 cut(s) 211, 816, 868
BmrI ACTGGG 1 cut(s) 142
BmsI GCATC 6 cut(s) 93, 266, 295, 759, 791, 1195
BmuI ACTGGG 1 cut(s) 142
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpmI CTGGAG 3 cut(s) 193, 837, 850
BpuEI CTTGAG 1 cut(s) 1194
BsaBI GATNNNNATC 2 cut(s) 309, 711
BsaHI GRCGYC 2 cut(s) 60, 968
BsaI GGTCTC 1 cut(s) 635
BsaJI CCNNGG 3 cut(s) 261, 579, 1029
BsaWI WCCGGW 1 cut(s) 337
Bsc4I CCNNNNNNNGG 1 cut(s) 443
Bse118I RCCGGY 1 cut(s) 655
Bse1I ACTGG 7 cut(s) 39, 81, 148, 357, 448, 1133, 1140
Bse3DI GCAATG 3 cut(s) 391, 478, 776
Bse8I GATNNNNATC 2 cut(s) 309, 711
BseBI CCWGG 3 cut(s) 211, 816, 868
BseDI CCNNGG 3 cut(s) 261, 579, 1029
BseGI GGATG 4 cut(s) 257, 301, 712, 888
BseJI GATNNNNATC 2 cut(s) 309, 711
BseLI CCNNNNNNNGG 1 cut(s) 443
BseMI GCAATG 3 cut(s) 391, 478, 776
BseMII CTCAG 1 cut(s) 561
BseNI ACTGG 7 cut(s) 39, 81, 148, 357, 448, 1133, 1140
BseXI GCAGC 1 cut(s) 101
BshFI GGCC 2 cut(s) 390, 655
BsiHKAI GWGCWC 4 cut(s) 34, 139, 679, 1200
BsiHKCI CYCGRG 2 cut(s) 243, 329
BsiSI CCGG 2 cut(s) 338, 656
BslFI GGGAC 1 cut(s) 706
BslI CCNNNNNNNGG 1 cut(s) 443
BsmAI GTCTC 4 cut(s) 156, 240, 635, 1112
BsmFI GGGAC 1 cut(s) 706
BsmI GAATGC 2 cut(s) 483, 846
BsnI GGCC 2 cut(s) 390, 655
Bso31I GGTCTC 1 cut(s) 635
BsoBI CYCGRG 2 cut(s) 243, 329
Bsp1286I GDGCHC 4 cut(s) 34, 139, 679, 1200
Bsp143I GATC 5 cut(s) 475, 861, 946, 1002, 1164
Bsp19I CCATGG 1 cut(s) 579
BspACI CCGC 3 cut(s) 5, 15, 488
BspANI GGCC 2 cut(s) 390, 655
BspCNI CTCAG 1 cut(s) 562
BspLI GGNNCC 4 cut(s) 434, 620, 694, 1079
BspTNI GGTCTC 1 cut(s) 635
BsrDI GCAATG 3 cut(s) 391, 478, 776
BsrFI RCCGGY 1 cut(s) 655
BsrI ACTGG 7 cut(s) 39, 81, 148, 357, 448, 1133, 1140
BssAI RCCGGY 1 cut(s) 655
BssECI CCNNGG 3 cut(s) 261, 579, 1029
BssMI GATC 5 cut(s) 475, 861, 946, 1002, 1164
BssNI GRCGYC 2 cut(s) 60, 968
BssSI CACGAG 1 cut(s) 962
BssT1I CCWWGG 3 cut(s) 261, 579, 1029
Bst2BI CACGAG 1 cut(s) 962
Bst2UI CCWGG 3 cut(s) 211, 816, 868
Bst4CI ACNGT 2 cut(s) 251, 281
BstACI GRCGYC 2 cut(s) 60, 968
BstC8I GCNNGC 6 cut(s) 30, 135, 184, 657, 661, 1009
BstDEI CTNAG 2 cut(s) 570, 1161
BstDSI CCRYGG 1 cut(s) 579
BstF5I GGATG 4 cut(s) 257, 301, 712, 888
BstKTI GATC 5 cut(s) 478, 864, 949, 1005, 1167
BstMAI GTCTC 4 cut(s) 156, 240, 635, 1112
BstMBI GATC 5 cut(s) 475, 861, 946, 1002, 1164
BstMWI GCNNNNNNNGC 4 cut(s) 120, 314, 656, 778
BstNI CCWGG 3 cut(s) 211, 816, 868
BstSCI CCNGG 3 cut(s) 209, 814, 866
BstSFI CTRYAG 1 cut(s) 1039
BstV1I GCAGC 1 cut(s) 101
BstX2I RGATCY 1 cut(s) 861
BstYI RGATCY 1 cut(s) 861
BsuRI GGCC 2 cut(s) 390, 655
BtgI CCRYGG 1 cut(s) 579
BtsCI GGATG 4 cut(s) 257, 301, 712, 888
BtsIMutI CAGTG 3 cut(s) 46, 98, 1147
Cac8I GCNNGC 6 cut(s) 30, 135, 184, 657, 661, 1009
Cfr10I RCCGGY 1 cut(s) 655
Cfr13I GGNCC 4 cut(s) 618, 653, 693, 1077
CseI GACGC 3 cut(s) 49, 106, 976
Csp6I GTAC 2 cut(s) 441, 547
CviAII CATG 6 cut(s) 129, 421, 580, 612, 623, 1202
CviJI RGCY 9 cut(s) 32, 85, 192, 214, 328, 390, 655, 1044, 1186
CviKI_1 RGCY 9 cut(s) 32, 85, 192, 214, 328, 390, 655, 1044, 1186
CviQI GTAC 2 cut(s) 441, 547
DdeI CTNAG 2 cut(s) 570, 1161
DpnI GATC 5 cut(s) 477, 863, 948, 1004, 1166
DpnII GATC 5 cut(s) 475, 861, 946, 1002, 1164
DraI TTTAAA 1 cut(s) 600
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 32
Eco130I CCWWGG 3 cut(s) 261, 579, 1029
Eco24I GRGCYC 1 cut(s) 34
Eco31I GGTCTC 1 cut(s) 635
Eco32I GATATC 1 cut(s) 222
Eco47I GGWCC 3 cut(s) 618, 693, 1077
Eco53kI GAGCTC 1 cut(s) 32
Eco57I CTGAAG 1 cut(s) 939
Eco88I CYCGRG 2 cut(s) 243, 329
EcoICRI GAGCTC 1 cut(s) 32
EcoO109I RGGNCCY 2 cut(s) 618, 1077
EcoRII CCWGG 3 cut(s) 209, 814, 866
EcoRV GATATC 1 cut(s) 222
EcoT14I CCWWGG 3 cut(s) 261, 579, 1029
EcoT38I GRGCYC 1 cut(s) 34
ErhI CCWWGG 3 cut(s) 261, 579, 1029
FaeI CATG 6 cut(s) 132, 424, 583, 615, 626, 1205
FaqI GGGAC 1 cut(s) 706
FatI CATG 6 cut(s) 128, 420, 579, 611, 622, 1201
FbaI TGATCA 1 cut(s) 475
Fnu4HI GCNGC 2 cut(s) 16, 115
FokI GGATG 4 cut(s) 244, 308, 699, 895
FriOI GRGCYC 1 cut(s) 34
Fsp4HI GCNGC 2 cut(s) 16, 115
FspBI CTAG 1 cut(s) 275
GluI GCNGC 2 cut(s) 16, 115
GsuI CTGGAG 3 cut(s) 193, 837, 850
HaeIII GGCC 2 cut(s) 390, 655
HapII CCGG 2 cut(s) 338, 656
HgaI GACGC 3 cut(s) 49, 106, 976
Hin1I GRCGYC 2 cut(s) 60, 968
Hin1II CATG 6 cut(s) 132, 424, 583, 615, 626, 1205
HinfI GANTC 5 cut(s) 229, 512, 722, 908, 1104
HpaII CCGG 2 cut(s) 338, 656
HphI GGTGA 5 cut(s) 154, 187, 1004, 1122, 1129
Hpy166II GTNNAC 2 cut(s) 22, 915
Hpy188I TCNGA 1 cut(s) 571
Hpy188III TCNNGA 5 cut(s) 217, 243, 498, 764, 964
Hpy8I GTNNAC 2 cut(s) 22, 915
Hpy99I CGWCG 2 cut(s) 14, 59
HpyAV CCTTC 3 cut(s) 286, 883, 989
HpyCH4III ACNGT 2 cut(s) 251, 281
HpyCH4V TGCA 7 cut(s) 123, 317, 384, 483, 682, 978, 1151
HpyF10VI GCNNNNNNNGC 4 cut(s) 120, 314, 656, 778
HpyF3I CTNAG 2 cut(s) 570, 1161
Hsp92I GRCGYC 2 cut(s) 60, 968
Hsp92II CATG 6 cut(s) 132, 424, 583, 615, 626, 1205
KroI GCCGGC 1 cut(s) 655
KroNI GCCGGC 1 cut(s) 657
Ksp22I TGATCA 1 cut(s) 475
Kzo9I GATC 5 cut(s) 475, 861, 946, 1002, 1164
LmnI GCTCC 1 cut(s) 1183
Lsp1109I GCAGC 1 cut(s) 101
LweI GCATC 6 cut(s) 93, 266, 295, 759, 791, 1195
MaeI CTAG 1 cut(s) 275
MaeIII GTNAC 4 cut(s) 160, 635, 964, 1135
MalI GATC 5 cut(s) 477, 863, 948, 1004, 1166
MboI GATC 5 cut(s) 475, 861, 946, 1002, 1164
MboII GAAGA 1 cut(s) 803
MfeI CAATTG 1 cut(s) 318
MflI RGATCY 1 cut(s) 861
MhlI GDGCHC 4 cut(s) 34, 139, 679, 1200
MluCI AATT 7 cut(s) 318, 352, 405, 454, 953, 1094, 1188
MlyI GAGTC 2 cut(s) 238, 1098
MroNI GCCGGC 1 cut(s) 655
MroXI GAANNNNTTC 1 cut(s) 759
MseI TTAA 2 cut(s) 599, 668
MslI CAYNNNNRTG 1 cut(s) 1203
MspI CCGG 2 cut(s) 338, 656
MspR9I CCNGG 3 cut(s) 211, 816, 868
MunI CAATTG 1 cut(s) 318
Mva1269I GAATGC 2 cut(s) 483, 846
MvaI CCWGG 3 cut(s) 211, 816, 868
MwoI GCNNNNNNNGC 4 cut(s) 120, 314, 656, 778
NaeI GCCGGC 1 cut(s) 657
NcoI CCATGG 1 cut(s) 579
NdeII GATC 5 cut(s) 475, 861, 946, 1002, 1164
NgoMIV GCCGGC 1 cut(s) 655
NlaIII CATG 6 cut(s) 132, 424, 583, 615, 626, 1205
NlaIV GGNNCC 4 cut(s) 434, 620, 694, 1079
NmuCI GTSAC 3 cut(s) 160, 964, 1135
PaeR7I CTCGAG 1 cut(s) 329
PcsI WCGNNNNNNNCGW 2 cut(s) 15, 51
PctI GAATGC 2 cut(s) 483, 846
PdiI GCCGGC 1 cut(s) 657
PdmI GAANNNNTTC 1 cut(s) 759
PfeI GAWTC 3 cut(s) 512, 722, 908
PflFI GACNNNGTC 1 cut(s) 59
PfoI TCCNGGA 1 cut(s) 814
PkrI GCNGC 2 cut(s) 17, 116
PleI GAGTC 2 cut(s) 237, 1098
PpsI GAGTC 2 cut(s) 237, 1098
PpuMI RGGWCCY 2 cut(s) 618, 1077
PsiI TTATAA 1 cut(s) 531
Psp124BI GAGCTC 1 cut(s) 34
Psp5II RGGWCCY 2 cut(s) 618, 1077
Psp6I CCWGG 3 cut(s) 209, 814, 866
PspGI CCWGG 3 cut(s) 209, 814, 866
PspN4I GGNNCC 4 cut(s) 434, 620, 694, 1079
PspPI GGNCC 4 cut(s) 618, 653, 693, 1077
PspPPI RGGWCCY 2 cut(s) 618, 1077
PspXI VCTCGAGB 1 cut(s) 329
PsuI RGATCY 1 cut(s) 861
PsyI GACNNNGTC 1 cut(s) 59
RsaI GTAC 2 cut(s) 442, 548
RsaNI GTAC 2 cut(s) 441, 547
RseI CAYNNNNRTG 1 cut(s) 1203
SacI GAGCTC 1 cut(s) 34
SaqAI TTAA 2 cut(s) 599, 668
SatI GCNGC 2 cut(s) 16, 115
Sau3AI GATC 5 cut(s) 475, 861, 946, 1002, 1164
Sau96I GGNCC 4 cut(s) 618, 653, 693, 1077
SchI GAGTC 2 cut(s) 238, 1098
ScrFI CCNGG 3 cut(s) 211, 816, 868
SduI GDGCHC 4 cut(s) 34, 139, 679, 1200
SfaNI GCATC 6 cut(s) 93, 266, 295, 759, 791, 1195
SfcI CTRYAG 1 cut(s) 1039
Sfr274I CTCGAG 1 cut(s) 329
SinI GGWCC 3 cut(s) 618, 693, 1077
SlaI CTCGAG 1 cut(s) 329
SmiMI CAYNNNNRTG 1 cut(s) 1203
SmlI CTYRAG 2 cut(s) 329, 1209
SmoI CTYRAG 2 cut(s) 329, 1209
Sse9I AATT 7 cut(s) 318, 352, 405, 454, 953, 1094, 1188
SsiI CCGC 3 cut(s) 5, 15, 488
SspI AATATT 1 cut(s) 370
SspMI CTAG 1 cut(s) 275
SstI GAGCTC 1 cut(s) 34
StyD4I CCNGG 3 cut(s) 209, 814, 866
StyI CCWWGG 3 cut(s) 261, 579, 1029
TaaI ACNGT 2 cut(s) 251, 281
TaqI TCGA 2 cut(s) 54, 330
TasI AATT 7 cut(s) 318, 352, 405, 454, 953, 1094, 1188
TatI WGTACW 1 cut(s) 440
TauI GCSGC 1 cut(s) 18
TfiI GAWTC 3 cut(s) 512, 722, 908
Tru1I TTAA 2 cut(s) 599, 668
Tru9I TTAA 2 cut(s) 599, 668
TscAI CASTG 3 cut(s) 46, 105, 1147
TseFI GTSAC 3 cut(s) 160, 964, 1135
TseI GCWGC 1 cut(s) 114
Tsp45I GTSAC 3 cut(s) 160, 964, 1135
TspDTI ATGAA 4 cut(s) 600, 701, 852, 902
TspRI CASTG 3 cut(s) 46, 105, 1147
Tth111I GACNNNGTC 1 cut(s) 59
VpaK11BI GGWCC 3 cut(s) 618, 693, 1077
XapI RAATTY 2 cut(s) 953, 1094
XhoI CTCGAG 1 cut(s) 329
XmnI GAANNNNTTC 1 cut(s) 759
XspI CTAG 1 cut(s) 275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.