RchiOBHm_Chr2g0154611

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000113
Physical Location & Seq
Reverse (-)
71716724 .. 71718333
1610 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52359

Sequence Viewer

Length: 1239 bp
ATGTCGGACGCTCTCTGCACTCGGCGGCAGAAACAAGTAGTTCTCTCCGGTACCGCACCTAGCTCCGAGTCTGTTGATTTAGATTGTGTCATTGTCGAAATCCTGTCACGTCTACCGGCCAAATCTTTACTCCGATTCCGGTGTGTGTGCAAAGCTTGGCGGGCCTTGATCTCCGACCCTTATTTCATCAGAAAACACCTCAGCTGCATCAACACCAAAATCAGCACCAGCTACTCTCTCCTTATCAGAGATAAAATTTTCCAATCCACAGAGTACGAAGCAATATTGAAGTTTTTGAGCCATGATGGTCCTCTTCCAAGCAGAAGGCTTGATTTTCCGGTACTGGATCGACTGGTTATTGTCTCTAGGATTTTAATAGTTGGCAGTTGCAATGGCTTGATATGTCTAATACTTGATTTTCATCATTTTCTAATGGAAGAATCCTTTACCTTTATGTTATGGAATCCTTGTACCGGAGAATACCGGGTCCTACCACAGCCTCCTGTTCATTCCTCCCGAGAATGTTTTTTCGGGTTCGGTTATGATTCAACCACTGATGATTACAAAGTAATACTGGGGAATAGCTATAAACCTGGTTATGAATATGTTGTTGTCTTTATGCTCAAAAGGGGTTCATGGAGGAAGATTGAAAGGCTCAACAGGTACTTCGGGGTGAGGAGGGTAGGGTGTTTAGTTAACGAAACTCTGCATTGGGTATTGAAGGAAAAGGAAGACGGTAGGTTAATTACTTCAAGGATAGTGTCATTTGATTTAGCGGAGGAGAAATTTCATGAGATTCCATTTCCCTATCCTCCCGATCCAAATGACAATGGGTTTTTGATTGCCGAAGTTGGAAATCCTTGTAATTGCTTAACTCTAGTCTTTCAAACCGTGTATAGTGATGTTGCTGGCAATTTAAAGTTGTGGGTTATGAAGGAGTATGGAGTCAAGGAATCTTGGACTGAAGTCATGAACATCTCTCCAGAGGTTATGGATGAAGATGAAAACATCCCTTTAGAGTTTTTGTATGACGGTGAACCGTATACATACAAGGCATGCATTTCTGATAATGGCGAGATTTTGATGCAGCTGGAACCTATAGGCACCTTGGCATTATATAACCCAAGGGAAAAGAAATATAGGACTGTCATGGGGTATCCTGATTACATGTATGAAACTGCCCCTTATATAGAAACTTTAGTTTCACCAGTAACCGGCAGTACCGGCGCAAGTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

412

Amino Acids

47.24

Weight (kDa)

5.55

Isoelectric Point (pI)

45.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 30 - 64 3.2e-10 F-box domain
F-box-like PF12937 30 - 65 2.1e-08 F-box-like
FBA_1 PF07734 124 - 330 3.1e-22 F-box associated beta propeller domain
FBA_3 PF08268 126 - 337 1.4e-20 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 50
AccB1I GGYRCC 2 cut(s) 50, 1103
AccI GTMKAC 2 cut(s) 112, 1043
AciI CCGC 4 cut(s) 25, 54, 160, 776
AclWI GGATC 2 cut(s) 354, 812
AcoI YGGCCR 1 cut(s) 117
AcsI RAATTY 2 cut(s) 255, 785
AcuI CTGAAG 1 cut(s) 984
AfaI GTAC 6 cut(s) 52, 275, 342, 472, 665, 1222
AfiI CCNNNNNNNGG 2 cut(s) 473, 1214
AflIII ACRYGT 1 cut(s) 1167
AgsI TTSAA 6 cut(s) 289, 549, 650, 721, 753, 887
AjiI CACGTC 1 cut(s) 110
AjnI CCWGG 1 cut(s) 592
AluBI AGCT 6 cut(s) 63, 155, 204, 231, 585, 1090
AluI AGCT 6 cut(s) 63, 155, 204, 231, 585, 1090
Alw26I GTCTC 1 cut(s) 367
AlwI GGATC 2 cut(s) 354, 812
Ama87I CYCGRG 1 cut(s) 516
AoxI GGCC 2 cut(s) 117, 162
ApeKI GCWGC 2 cut(s) 204, 1087
ApoI RAATTY 2 cut(s) 255, 785
Asp718I GGTACC 1 cut(s) 50
AspLEI GCGC 1 cut(s) 1229
AspS9I GGNCC 3 cut(s) 162, 308, 487
AsuC2I CCSGG 1 cut(s) 485
AsuHPI GGTGA 3 cut(s) 685, 1046, 1197
AvaI CYCGRG 1 cut(s) 516
AvaII GGWCC 2 cut(s) 308, 487
BanI GGYRCC 2 cut(s) 50, 1103
BbsI GAAGAC 1 cut(s) 738
BbvCI CCTCAGC 1 cut(s) 200
BbvI GCAGC 2 cut(s) 191, 1099
BccI CCATC 1 cut(s) 299
BciT130I CCWGG 1 cut(s) 594
BciVI GTATCC 1 cut(s) 1167
BcnI CCSGG 1 cut(s) 485
BcoDI GTCTC 1 cut(s) 367
BfaI CTAG 3 cut(s) 60, 366, 878
BfmI CTRYAG 1 cut(s) 1098
BfuI GTATCC 1 cut(s) 1167
BisI GCNGC 3 cut(s) 26, 205, 1088
BlsI GCNGC 3 cut(s) 27, 206, 1089
Bme1390I CCNGG 2 cut(s) 485, 594
Bme18I GGWCC 2 cut(s) 308, 487
BmeT110I CYCGRG 1 cut(s) 516
BmgBI CACGTC 1 cut(s) 110
BmgT120I GGNCC 3 cut(s) 162, 308, 487
BmiI GGNNCC 4 cut(s) 52, 488, 1095, 1105
BmrFI CCNGG 2 cut(s) 485, 594
BmrI ACTGGG 1 cut(s) 584
BmsI GCATC 2 cut(s) 216, 1074
BmuI ACTGGG 1 cut(s) 584
BoxI GACNNNNGTC 1 cut(s) 965
BpiI GAAGAC 1 cut(s) 738
BpmI CTGGAG 1 cut(s) 966
Bpu10I CCTNAGC 1 cut(s) 200
BpuMI CCSGG 1 cut(s) 485
BsaBI GATNNNNATC 1 cut(s) 420
BsaJI CCNNGG 2 cut(s) 1107, 1124
BsaWI WCCGGW 4 cut(s) 47, 138, 337, 473
Bsc4I CCNNNNNNNGG 2 cut(s) 473, 1214
Bse118I RCCGGY 3 cut(s) 115, 1214, 1223
Bse1I ACTGG 4 cut(s) 348, 357, 579, 1208
Bse3DI GCAATG 1 cut(s) 397
Bse8I GATNNNNATC 1 cut(s) 420
BseBI CCWGG 1 cut(s) 594
BseDI CCNNGG 2 cut(s) 1107, 1124
BseGI GGATG 2 cut(s) 1000, 1008
BseJI GATNNNNATC 1 cut(s) 420
BseLI CCNNNNNNNGG 2 cut(s) 473, 1214
BseMI GCAATG 1 cut(s) 397
BseMII CTCAG 1 cut(s) 214
BseNI ACTGG 4 cut(s) 348, 357, 579, 1208
BseRI GAGGAG 2 cut(s) 691, 794
BseXI GCAGC 2 cut(s) 191, 1099
BshFI GGCC 2 cut(s) 119, 164
BshNI GGYRCC 2 cut(s) 50, 1103
BsiHKCI CYCGRG 1 cut(s) 516
BsiSI CCGG 8 cut(s) 48, 116, 139, 338, 474, 484, 1215, 1224
BslI CCNNNNNNNGG 2 cut(s) 473, 1214
BsmAI GTCTC 1 cut(s) 367
BsnI GGCC 2 cut(s) 119, 164
BsoBI CYCGRG 1 cut(s) 516
Bsp143I GATC 3 cut(s) 168, 346, 817
BspACI CCGC 4 cut(s) 25, 54, 160, 776
BspANI GGCC 2 cut(s) 119, 164
BspCNI CTCAG 1 cut(s) 213
BspHI TCATGA 2 cut(s) 790, 969
BspLI GGNNCC 4 cut(s) 52, 488, 1095, 1105
BspPI GGATC 2 cut(s) 354, 812
BspT107I GGYRCC 2 cut(s) 50, 1103
BsrDI GCAATG 1 cut(s) 397
BsrFI RCCGGY 3 cut(s) 115, 1214, 1223
BsrI ACTGG 4 cut(s) 348, 357, 579, 1208
BssAI RCCGGY 3 cut(s) 115, 1214, 1223
BssECI CCNNGG 2 cut(s) 1107, 1124
BssMI GATC 3 cut(s) 168, 346, 817
BssNAI GTATAC 1 cut(s) 1044
BssT1I CCWWGG 2 cut(s) 1107, 1124
Bst1107I GTATAC 1 cut(s) 1044
Bst2UI CCWGG 1 cut(s) 594
Bst4CI ACNGT 5 cut(s) 737, 892, 1034, 1041, 1147
Bst6I CTCTTC 1 cut(s) 318
BstC8I GCNNGC 3 cut(s) 162, 910, 1057
BstDEI CTNAG 1 cut(s) 200
BstF5I GGATG 2 cut(s) 1000, 1008
BstHHI GCGC 1 cut(s) 1229
BstKTI GATC 3 cut(s) 171, 349, 820
BstMAI GTCTC 1 cut(s) 367
BstMBI GATC 3 cut(s) 168, 346, 817
BstMWI GCNNNNNNNGC 2 cut(s) 161, 1224
BstNI CCWGG 1 cut(s) 594
BstNSI RCATGY 2 cut(s) 1059, 1171
BstPAI GACNNNNGTC 1 cut(s) 965
BstSCI CCNGG 2 cut(s) 483, 592
BstSFI CTRYAG 1 cut(s) 1098
BstV1I GCAGC 2 cut(s) 191, 1099
BstV2I GAAGAC 1 cut(s) 738
BstZ17I GTATAC 1 cut(s) 1044
BsuI GTATCC 1 cut(s) 1167
BsuRI GGCC 2 cut(s) 119, 164
BtrI CACGTC 1 cut(s) 110
BtsCI GGATG 2 cut(s) 1000, 1008
BtsIMutI CAGTG 1 cut(s) 552
Cac8I GCNNGC 3 cut(s) 162, 910, 1057
CciI TCATGA 2 cut(s) 790, 969
CfoI GCGC 1 cut(s) 1229
Cfr10I RCCGGY 3 cut(s) 115, 1214, 1223
Cfr13I GGNCC 3 cut(s) 162, 308, 487
CseI GACGC 1 cut(s) 17
CsiI ACCWGGT 1 cut(s) 592
Csp6I GTAC 6 cut(s) 51, 274, 341, 471, 664, 1221
CviAII CATG 7 cut(s) 302, 636, 791, 970, 1056, 1150, 1168
CviQI GTAC 6 cut(s) 51, 274, 341, 471, 664, 1221
DdeI CTNAG 1 cut(s) 200
DpnI GATC 3 cut(s) 170, 348, 819
DpnII GATC 3 cut(s) 168, 346, 817
DraI TTTAAA 1 cut(s) 918
EaeI YGGCCR 1 cut(s) 117
Eam1104I CTCTTC 1 cut(s) 318
EarI CTCTTC 1 cut(s) 318
Eco130I CCWWGG 2 cut(s) 1107, 1124
Eco47I GGWCC 2 cut(s) 308, 487
Eco57I CTGAAG 1 cut(s) 984
Eco88I CYCGRG 1 cut(s) 516
EcoO109I RGGNCCY 1 cut(s) 487
EcoRII CCWGG 1 cut(s) 592
EcoT14I CCWWGG 2 cut(s) 1107, 1124
EcoT22I ATGCAT 1 cut(s) 1061
ErhI CCWWGG 2 cut(s) 1107, 1124
FaeI CATG 7 cut(s) 305, 639, 794, 973, 1059, 1153, 1171
FatI CATG 7 cut(s) 301, 635, 790, 969, 1055, 1149, 1167
FauI CCCGC 1 cut(s) 153
FblI GTMKAC 2 cut(s) 112, 1043
Fnu4HI GCNGC 3 cut(s) 26, 205, 1088
FokI GGATG 2 cut(s) 995, 1007
Fsp4HI GCNGC 3 cut(s) 26, 205, 1088
FspBI CTAG 3 cut(s) 60, 366, 878
GlaI GCGC 1 cut(s) 1228
GluI GCNGC 3 cut(s) 26, 205, 1088
GsuI CTGGAG 1 cut(s) 966
HaeIII GGCC 2 cut(s) 119, 164
HapII CCGG 8 cut(s) 48, 116, 139, 338, 474, 484, 1215, 1224
HgaI GACGC 1 cut(s) 17
HhaI GCGC 1 cut(s) 1229
Hin1II CATG 7 cut(s) 305, 639, 794, 973, 1059, 1153, 1171
Hin6I GCGC 1 cut(s) 1227
HinP1I GCGC 1 cut(s) 1227
HincII GTYRAC 1 cut(s) 697
HindII GTYRAC 1 cut(s) 697
HindIII AAGCTT 1 cut(s) 153
HinfI GANTC 8 cut(s) 68, 135, 440, 463, 545, 796, 945, 953
HpaI GTTAAC 1 cut(s) 697
HpaII CCGG 8 cut(s) 48, 116, 139, 338, 474, 484, 1215, 1224
HphI GGTGA 3 cut(s) 685, 1046, 1197
Hpy166II GTNNAC 4 cut(s) 113, 697, 1037, 1044
Hpy188I TCNGA 7 cut(s) 7, 67, 134, 175, 191, 248, 1066
Hpy188III TCNNGA 6 cut(s) 516, 791, 815, 970, 983, 1160
Hpy8I GTNNAC 4 cut(s) 113, 697, 1037, 1044
HpyAV CCTTC 3 cut(s) 318, 715, 928
HpyCH4III ACNGT 5 cut(s) 737, 892, 1034, 1041, 1147
HpyCH4IV ACGT 1 cut(s) 109
HpyCH4V TGCA 7 cut(s) 18, 150, 207, 390, 709, 1059, 1087
HpyF10VI GCNNNNNNNGC 2 cut(s) 161, 1224
HpyF3I CTNAG 1 cut(s) 200
HpySE526I ACGT 1 cut(s) 109
Hsp92II CATG 7 cut(s) 305, 639, 794, 973, 1059, 1153, 1171
HspAI GCGC 1 cut(s) 1227
KpnI GGTACC 1 cut(s) 54
KspAI GTTAAC 1 cut(s) 697
Kzo9I GATC 3 cut(s) 168, 346, 817
LmnI GCTCC 1 cut(s) 68
Lsp1109I GCAGC 2 cut(s) 191, 1099
LweI GCATC 2 cut(s) 216, 1074
MabI ACCWGGT 1 cut(s) 592
MaeI CTAG 3 cut(s) 60, 366, 878
MaeII ACGT 1 cut(s) 109
MaeIII GTNAC 2 cut(s) 105, 1210
MalI GATC 3 cut(s) 170, 348, 819
MboI GATC 3 cut(s) 168, 346, 817
MboII GAAGA 5 cut(s) 305, 449, 655, 743, 1010
MluCI AATT 5 cut(s) 255, 744, 785, 865, 913
MlyI GAGTC 2 cut(s) 77, 954
MmeI TCCRAC 2 cut(s) 198, 832
Mph1103I ATGCAT 1 cut(s) 1061
MseI TTAA 5 cut(s) 374, 696, 743, 872, 917
MspA1I CMGCKG 2 cut(s) 204, 1090
MspI CCGG 8 cut(s) 48, 116, 139, 338, 474, 484, 1215, 1224
MspR9I CCNGG 2 cut(s) 485, 594
MvaI CCWGG 1 cut(s) 594
MwoI GCNNNNNNNGC 2 cut(s) 161, 1224
NciI CCSGG 1 cut(s) 485
NdeII GATC 3 cut(s) 168, 346, 817
NlaIII CATG 7 cut(s) 305, 639, 794, 973, 1059, 1153, 1171
NlaIV GGNNCC 4 cut(s) 52, 488, 1095, 1105
NmuCI GTSAC 1 cut(s) 105
NsiI ATGCAT 1 cut(s) 1061
NspI RCATGY 2 cut(s) 1059, 1171
PaeI GCATGC 1 cut(s) 1059
PagI TCATGA 2 cut(s) 790, 969
PciI ACATGT 1 cut(s) 1167
PfeI GAWTC 6 cut(s) 135, 440, 463, 545, 796, 953
PkrI GCNGC 3 cut(s) 27, 206, 1089
PleI GAGTC 2 cut(s) 76, 953
PpsI GAGTC 2 cut(s) 76, 953
PpuMI RGGWCCY 1 cut(s) 487
PscI ACATGT 1 cut(s) 1167
PshAI GACNNNNGTC 1 cut(s) 965
Psp5II RGGWCCY 1 cut(s) 487
Psp6I CCWGG 1 cut(s) 592
PspGI CCWGG 1 cut(s) 592
PspN4I GGNNCC 4 cut(s) 52, 488, 1095, 1105
PspPI GGNCC 3 cut(s) 162, 308, 487
PspPPI RGGWCCY 1 cut(s) 487
PvuII CAGCTG 2 cut(s) 204, 1090
RsaI GTAC 6 cut(s) 52, 275, 342, 472, 665, 1222
RsaNI GTAC 6 cut(s) 51, 274, 341, 471, 664, 1221
SaqAI TTAA 5 cut(s) 374, 696, 743, 872, 917
SatI GCNGC 3 cut(s) 26, 205, 1088
Sau3AI GATC 3 cut(s) 168, 346, 817
Sau96I GGNCC 3 cut(s) 162, 308, 487
SchI GAGTC 2 cut(s) 77, 954
ScrFI CCNGG 2 cut(s) 485, 594
SexAI ACCWGGT 1 cut(s) 592
SfaNI GCATC 2 cut(s) 216, 1074
SfcI CTRYAG 1 cut(s) 1098
SinI GGWCC 2 cut(s) 308, 487
SphI GCATGC 1 cut(s) 1059
Sse9I AATT 5 cut(s) 255, 744, 785, 865, 913
SsiI CCGC 4 cut(s) 25, 54, 160, 776
SspI AATATT 1 cut(s) 285
SspMI CTAG 3 cut(s) 60, 366, 878
StyD4I CCNGG 2 cut(s) 483, 592
StyI CCWWGG 2 cut(s) 1107, 1124
TaaI ACNGT 5 cut(s) 737, 892, 1034, 1041, 1147
TaiI ACGT 1 cut(s) 112
TaqI TCGA 2 cut(s) 96, 349
TasI AATT 5 cut(s) 255, 744, 785, 865, 913
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 6 cut(s) 135, 440, 463, 545, 796, 953
Tru1I TTAA 5 cut(s) 374, 696, 743, 872, 917
Tru9I TTAA 5 cut(s) 374, 696, 743, 872, 917
TscAI CASTG 1 cut(s) 559
TseFI GTSAC 1 cut(s) 105
TseI GCWGC 2 cut(s) 204, 1087
Tsp45I GTSAC 1 cut(s) 105
TspRI CASTG 1 cut(s) 559
VpaK11BI GGWCC 2 cut(s) 308, 487
XapI RAATTY 2 cut(s) 255, 785
XceI RCATGY 2 cut(s) 1059, 1171
XmiI GTMKAC 2 cut(s) 112, 1043
XspI CTAG 3 cut(s) 60, 366, 878
Zsp2I ATGCAT 1 cut(s) 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.