RchiOBHm_Chr2g0154521

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000113
Physical Location & Seq
Reverse (-)
71678161 .. 71680480
2320 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52350

Sequence Viewer

Length: 1212 bp
ATGGGGGACGGCGCTATGGTGCTTAAGCGAGCTCATACCGACTTTGGCGACTACGAGGAAGATGTGATTGCGGAGATCCTAGCAAGGCTTCCGGCCAAATCCCTGATGCGATTCCGGTGCGTCTGCAAGTCATGGCGTGCTTTGATCTCTGATTCCTATTTTGTAAAGAAACACCTCAGCTATGGAGAGAGAGGCATCACCGAGAGCGCTCAGAGGCTCATTTTCATGCTGGATCCTCCCTTGGCCTTGGACTGTGAAGCCTTGAAAAGCATGGAGGACTATGAAGCCTTGGAAAGTATTAAGGATGATATTCATGGTCCTGGTCCTGGTGCTGGTGGTCACTTTGCAGTCTCCCAGCTGGATTTTCCGGTAACGAAAACTATCTCTGATTTCAGTTATAGAGTTCTTGTTGGTGCTTGCAATGGCTTGGTATGTGTAGAAGTAGGCTACGAGGCCATTCTGTTATGGAACCCTTGTACTAGAGACTCCAAGGTTTTACCAAAACCTCCTCGAGTTGTAGACTCCAAGTTTAGCAACTATCTTTATGGATTCGGGTATGATTCTGCTAGTGACGACTACAAGGTGATATGGGGGTTCGCTTGTTATTCAAATGGTGCTACCGTGATTGACATCTTTTCACTGAAAACAGGTTCATGGAGGACCGTCAAAGACATTGGTTATGTTTCATTAATAACACAGCAGGGGTTGTTCTTAAACGGAGCTCTGCATTGGTTATATAATCTACCTGAAGGGGTCACACAAATTTTGTCTTTTGATTTAGGGGAGGAGAAATTTCAGAAGACGATTCCATTACCCTATGATGACTGGTTTGATGATCCCATGATTCATAAAAATTGCCTCTGTGTACTTAATTGCCCAACTGGAACCAACAGTTTCAACATATGGATGATGAAAGAATATGGGGTCAAGGAATCCTGGACTGAAGTCTTACAATTTTCTCTGGAGAATTATGTAGAGTCTTATGATGATTTAAGAGGATATTTCAGGCCTGTGTGCATTTTAGAGAACGGTTTAGTTTTGATTGATCAGATAGGTGTGTGTGAAGACCTCATGGTATTATCTGATCTAAAGGAGAAGAAATTCAAGCATTTTGTTGAGGTCGCAAATGACTTGGAGTTTAGAACAGTCATTTACCGAGAGACATTAGTTTCACCAGACGCCCACACATACAAAACCAACAATGTGAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

403

Amino Acids

45.67

Weight (kDa)

4.94

Isoelectric Point (pI)

24.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 56 1.5e-10 F-box domain
F-box-like PF12937 21 - 54 2.3e-07 F-box-like
FBA_3 PF08268 132 - 369 4.1e-24 F-box associated beta propeller domain
FBA_1 PF07734 137 - 367 8.7e-32 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 519
AciI CCGC 1 cut(s) 71
AclWI GGATC 4 cut(s) 70, 227, 240, 830
AcoI YGGCCR 1 cut(s) 93
AcsI RAATTY 3 cut(s) 762, 791, 1100
AcuI CTGAAG 2 cut(s) 768, 963
AcyI GRCGYC 1 cut(s) 1179
AfaI GTAC 2 cut(s) 478, 867
AfeI AGCGCT 1 cut(s) 208
AfiI CCNNNNNNNGG 2 cut(s) 326, 332
AflII CTTAAG 1 cut(s) 23
AgsI TTSAA 4 cut(s) 265, 609, 898, 1105
AjnI CCWGG 3 cut(s) 319, 325, 935
AluBI AGCT 5 cut(s) 32, 180, 358, 722, 1209
AluI AGCT 5 cut(s) 32, 180, 358, 722, 1209
Alw21I GWGCWC 2 cut(s) 34, 724
Alw26I GTCTC 3 cut(s) 355, 477, 1154
AlwI GGATC 4 cut(s) 70, 227, 240, 830
Ama87I CYCGRG 1 cut(s) 510
Aor51HI AGCGCT 1 cut(s) 208
AoxI GGCC 4 cut(s) 93, 243, 453, 1007
ApoI RAATTY 3 cut(s) 762, 791, 1100
AseI ATTAAT 1 cut(s) 689
Asp700I GAANNNNTTC 1 cut(s) 1100
AspLEI GCGC 2 cut(s) 14, 209
AspS9I GGNCC 3 cut(s) 317, 323, 660
AsuHPI GGTGA 3 cut(s) 190, 595, 1164
AvaI CYCGRG 1 cut(s) 510
AvaII GGWCC 3 cut(s) 317, 323, 660
BamHI GGATCC 1 cut(s) 232
BanII GRGCYC 2 cut(s) 34, 724
BbsI GAAGAC 2 cut(s) 806, 1071
Bbv12I GWGCWC 2 cut(s) 34, 724
BbvCI CCTCAGC 1 cut(s) 176
BceAI ACGGC 1 cut(s) 25
BcgI CGANNNNNNTGC 2 cut(s) 99, 133
BciT130I CCWGG 3 cut(s) 321, 327, 937
BclI TGATCA 1 cut(s) 1045
BcoDI GTCTC 3 cut(s) 355, 477, 1154
BfaI CTAG 4 cut(s) 80, 480, 567, 1210
BfoI RGCGCY 2 cut(s) 15, 210
BfrI CTTAAG 1 cut(s) 23
Bme1390I CCNGG 3 cut(s) 321, 327, 937
Bme18I GGWCC 3 cut(s) 317, 323, 660
BmeT110I CYCGRG 1 cut(s) 510
BmgT120I GGNCC 3 cut(s) 317, 323, 660
BmiI GGNNCC 3 cut(s) 234, 470, 886
BmrFI CCNGG 3 cut(s) 321, 327, 937
BmsI GCATC 2 cut(s) 96, 204
BoxI GACNNNNGTC 1 cut(s) 944
BpiI GAAGAC 2 cut(s) 806, 1071
BpmI CTGGAG 1 cut(s) 983
Bpu10I CCTNAGC 1 cut(s) 176
BsaBI GATNNNNATC 1 cut(s) 629
BsaHI GRCGYC 1 cut(s) 1179
BsaJI CCNNGG 4 cut(s) 240, 246, 288, 489
BsaWI WCCGGW 2 cut(s) 114, 367
Bsc4I CCNNNNNNNGG 2 cut(s) 326, 332
Bse1I ACTGG 2 cut(s) 830, 886
Bse3DI GCAATG 1 cut(s) 427
Bse8I GATNNNNATC 1 cut(s) 629
BseBI CCWGG 3 cut(s) 321, 327, 937
BseDI CCNNGG 4 cut(s) 240, 246, 288, 489
BseGI GGATG 2 cut(s) 310, 912
BseJI GATNNNNATC 1 cut(s) 629
BseLI CCNNNNNNNGG 2 cut(s) 326, 332
BseMI GCAATG 1 cut(s) 427
BseMII CTCAG 2 cut(s) 190, 224
BseNI ACTGG 2 cut(s) 830, 886
BseRI GAGGAG 2 cut(s) 498, 800
BseYI CCCAGC 1 cut(s) 354
BshFI GGCC 4 cut(s) 95, 245, 455, 1009
BsiHKAI GWGCWC 2 cut(s) 34, 724
BsiHKCI CYCGRG 1 cut(s) 510
BsiSI CCGG 3 cut(s) 92, 115, 368
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 2 cut(s) 326, 332
BsmAI GTCTC 3 cut(s) 355, 477, 1154
BsmFI GGGAC 1 cut(s) 20
BsnI GGCC 4 cut(s) 95, 245, 455, 1009
BsoBI CYCGRG 1 cut(s) 510
Bsp1286I GDGCHC 2 cut(s) 34, 724
Bsp143I GATC 6 cut(s) 75, 144, 232, 835, 1045, 1084
BspACI CCGC 1 cut(s) 71
BspANI GGCC 4 cut(s) 95, 245, 455, 1009
BspCNI CTCAG 2 cut(s) 189, 223
BspLI GGNNCC 3 cut(s) 234, 470, 886
BspPI GGATC 4 cut(s) 70, 227, 240, 830
BspTI CTTAAG 1 cut(s) 23
BsrDI GCAATG 1 cut(s) 427
BsrI ACTGG 2 cut(s) 830, 886
BssECI CCNNGG 4 cut(s) 240, 246, 288, 489
BssMI GATC 6 cut(s) 75, 144, 232, 835, 1045, 1084
BssNI GRCGYC 1 cut(s) 1179
BssT1I CCWWGG 4 cut(s) 240, 246, 288, 489
Bst2UI CCWGG 3 cut(s) 321, 327, 937
Bst4CI ACNGT 6 cut(s) 254, 622, 664, 893, 1031, 1147
BstACI GRCGYC 1 cut(s) 1179
BstAFI CTTAAG 1 cut(s) 23
BstC8I GCNNGC 3 cut(s) 30, 138, 418
BstDEI CTNAG 2 cut(s) 176, 210
BstF5I GGATG 2 cut(s) 310, 912
BstH2I RGCGCY 2 cut(s) 15, 210
BstHHI GCGC 2 cut(s) 14, 209
BstKTI GATC 6 cut(s) 78, 147, 235, 838, 1048, 1087
BstMAI GTCTC 3 cut(s) 355, 477, 1154
BstMBI GATC 6 cut(s) 75, 144, 232, 835, 1045, 1084
BstNI CCWGG 3 cut(s) 321, 327, 937
BstPAI GACNNNNGTC 1 cut(s) 944
BstSCI CCNGG 3 cut(s) 319, 325, 935
BstV2I GAAGAC 2 cut(s) 806, 1071
BstX2I RGATCY 2 cut(s) 75, 232
BstYI RGATCY 2 cut(s) 75, 232
BsuRI GGCC 4 cut(s) 95, 245, 455, 1009
BtsCI GGATG 2 cut(s) 310, 912
BtsIMutI CAGTG 1 cut(s) 638
Cac8I GCNNGC 3 cut(s) 30, 138, 418
CfoI GCGC 2 cut(s) 14, 209
Cfr13I GGNCC 3 cut(s) 317, 323, 660
CseI GACGC 2 cut(s) 109, 1187
Csp6I GTAC 2 cut(s) 477, 866
CviAII CATG 7 cut(s) 132, 226, 271, 314, 654, 841, 1072
CviQI GTAC 2 cut(s) 477, 866
DdeI CTNAG 2 cut(s) 176, 210
DpnI GATC 6 cut(s) 77, 146, 234, 837, 1047, 1086
DpnII GATC 6 cut(s) 75, 144, 232, 835, 1045, 1084
EaeI YGGCCR 1 cut(s) 93
Ecl136II GAGCTC 2 cut(s) 32, 722
Eco130I CCWWGG 4 cut(s) 240, 246, 288, 489
Eco147I AGGCCT 1 cut(s) 1009
Eco24I GRGCYC 2 cut(s) 34, 724
Eco47I GGWCC 3 cut(s) 317, 323, 660
Eco47III AGCGCT 1 cut(s) 208
Eco53kI GAGCTC 2 cut(s) 32, 722
Eco57I CTGAAG 2 cut(s) 768, 963
Eco88I CYCGRG 1 cut(s) 510
EcoICRI GAGCTC 2 cut(s) 32, 722
EcoRII CCWGG 3 cut(s) 319, 325, 935
EcoT14I CCWWGG 4 cut(s) 240, 246, 288, 489
EcoT38I GRGCYC 2 cut(s) 34, 724
ErhI CCWWGG 4 cut(s) 240, 246, 288, 489
FaeI CATG 7 cut(s) 135, 229, 274, 317, 657, 844, 1075
FaqI GGGAC 1 cut(s) 20
FatI CATG 7 cut(s) 131, 225, 270, 313, 653, 840, 1071
FauNDI CATATG 1 cut(s) 902
FbaI TGATCA 1 cut(s) 1045
FblI GTMKAC 1 cut(s) 519
FokI GGATG 2 cut(s) 317, 919
FriOI GRGCYC 2 cut(s) 34, 724
FspBI CTAG 4 cut(s) 80, 480, 567, 1210
GlaI GCGC 2 cut(s) 13, 208
GsaI CCCAGC 1 cut(s) 358
GsuI CTGGAG 1 cut(s) 983
HaeII RGCGCY 2 cut(s) 15, 210
HaeIII GGCC 4 cut(s) 95, 245, 455, 1009
HapII CCGG 3 cut(s) 92, 115, 368
HgaI GACGC 2 cut(s) 109, 1187
HhaI GCGC 2 cut(s) 14, 209
Hin1I GRCGYC 1 cut(s) 1179
Hin1II CATG 7 cut(s) 135, 229, 274, 317, 657, 844, 1075
Hin6I GCGC 2 cut(s) 12, 207
HinP1I GCGC 2 cut(s) 12, 207
HpaII CCGG 3 cut(s) 92, 115, 368
HphI GGTGA 3 cut(s) 190, 595, 1164
Hpy166II GTNNAC 2 cut(s) 520, 866
Hpy188I TCNGA 6 cut(s) 151, 213, 388, 798, 1050, 1084
Hpy188III TCNNGA 1 cut(s) 962
Hpy8I GTNNAC 2 cut(s) 520, 866
HpyAV CCTTC 1 cut(s) 743
HpyCH4III ACNGT 6 cut(s) 254, 622, 664, 893, 1031, 1147
HpyCH4V TGCA 5 cut(s) 126, 347, 420, 727, 1017
HpyF3I CTNAG 2 cut(s) 176, 210
Hsp92I GRCGYC 1 cut(s) 1179
Hsp92II CATG 7 cut(s) 135, 229, 274, 317, 657, 844, 1075
HspAI GCGC 2 cut(s) 12, 207
Ksp22I TGATCA 1 cut(s) 1045
Kzo9I GATC 6 cut(s) 75, 144, 232, 835, 1045, 1084
LmnI GCTCC 1 cut(s) 719
LweI GCATC 2 cut(s) 96, 204
MaeI CTAG 4 cut(s) 80, 480, 567, 1210
MaeIII GTNAC 4 cut(s) 338, 370, 569, 754
MalI GATC 6 cut(s) 77, 146, 234, 837, 1047, 1086
MboI GATC 6 cut(s) 75, 144, 232, 835, 1045, 1084
MboII GAAGA 4 cut(s) 71, 811, 1076, 1108
MflI RGATCY 2 cut(s) 75, 232
MhlI GDGCHC 2 cut(s) 34, 724
MluCI AATT 7 cut(s) 762, 791, 853, 871, 953, 967, 1100
MlyI GAGTC 3 cut(s) 479, 515, 986
MroXI GAANNNNTTC 1 cut(s) 1100
MseI TTAA 6 cut(s) 24, 300, 689, 713, 870, 992
MslI CAYNNNNRTG 2 cut(s) 224, 905
MspA1I CMGCKG 1 cut(s) 358
MspCI CTTAAG 1 cut(s) 23
MspI CCGG 3 cut(s) 92, 115, 368
MspR9I CCNGG 3 cut(s) 321, 327, 937
MvaI CCWGG 3 cut(s) 321, 327, 937
NdeI CATATG 1 cut(s) 902
NdeII GATC 6 cut(s) 75, 144, 232, 835, 1045, 1084
NlaIII CATG 7 cut(s) 135, 229, 274, 317, 657, 844, 1075
NlaIV GGNNCC 3 cut(s) 234, 470, 886
NmuCI GTSAC 3 cut(s) 338, 569, 754
PaeR7I CTCGAG 1 cut(s) 510
PceI AGGCCT 1 cut(s) 1009
PdmI GAANNNNTTC 1 cut(s) 1100
PfeI GAWTC 7 cut(s) 111, 152, 549, 560, 805, 844, 932
PfoI TCCNGGA 1 cut(s) 935
PleI GAGTC 3 cut(s) 479, 515, 985
PpsI GAGTC 3 cut(s) 479, 515, 985
PshAI GACNNNNGTC 1 cut(s) 944
PshBI ATTAAT 1 cut(s) 689
Psp124BI GAGCTC 2 cut(s) 34, 724
Psp6I CCWGG 3 cut(s) 319, 325, 935
PspFI CCCAGC 1 cut(s) 354
PspGI CCWGG 3 cut(s) 319, 325, 935
PspN4I GGNNCC 3 cut(s) 234, 470, 886
PspPI GGNCC 3 cut(s) 317, 323, 660
PspXI VCTCGAGB 1 cut(s) 510
PsuI RGATCY 2 cut(s) 75, 232
PvuII CAGCTG 1 cut(s) 358
RsaI GTAC 2 cut(s) 478, 867
RsaNI GTAC 2 cut(s) 477, 866
RseI CAYNNNNRTG 2 cut(s) 224, 905
SacI GAGCTC 2 cut(s) 34, 724
SaqAI TTAA 6 cut(s) 24, 300, 689, 713, 870, 992
Sau3AI GATC 6 cut(s) 75, 144, 232, 835, 1045, 1084
Sau96I GGNCC 3 cut(s) 317, 323, 660
SchI GAGTC 3 cut(s) 479, 515, 986
ScrFI CCNGG 3 cut(s) 321, 327, 937
SduI GDGCHC 2 cut(s) 34, 724
SfaNI GCATC 2 cut(s) 96, 204
Sfr274I CTCGAG 1 cut(s) 510
SinI GGWCC 3 cut(s) 317, 323, 660
SlaI CTCGAG 1 cut(s) 510
SmiMI CAYNNNNRTG 2 cut(s) 224, 905
SmlI CTYRAG 2 cut(s) 23, 510
SmoI CTYRAG 2 cut(s) 23, 510
Sse9I AATT 7 cut(s) 762, 791, 853, 871, 953, 967, 1100
SseBI AGGCCT 1 cut(s) 1009
SsiI CCGC 1 cut(s) 71
SspMI CTAG 4 cut(s) 80, 480, 567, 1210
SstI GAGCTC 2 cut(s) 34, 724
StuI AGGCCT 1 cut(s) 1009
StyD4I CCNGG 3 cut(s) 319, 325, 935
StyI CCWWGG 4 cut(s) 240, 246, 288, 489
TaaI ACNGT 6 cut(s) 254, 622, 664, 893, 1031, 1147
TaqI TCGA 1 cut(s) 511
TasI AATT 7 cut(s) 762, 791, 853, 871, 953, 967, 1100
TatI WGTACW 2 cut(s) 476, 865
TfiI GAWTC 7 cut(s) 111, 152, 549, 560, 805, 844, 932
Tru1I TTAA 6 cut(s) 24, 300, 689, 713, 870, 992
Tru9I TTAA 6 cut(s) 24, 300, 689, 713, 870, 992
TscAI CASTG 1 cut(s) 645
TseFI GTSAC 3 cut(s) 338, 569, 754
Tsp45I GTSAC 3 cut(s) 338, 569, 754
TspDTI ATGAA 7 cut(s) 214, 297, 302, 642, 675, 836, 926
TspGWI ACGGA 1 cut(s) 732
TspRI CASTG 1 cut(s) 645
Vha464I CTTAAG 1 cut(s) 23
VpaK11BI GGWCC 3 cut(s) 317, 323, 660
VspI ATTAAT 1 cut(s) 689
XapI RAATTY 3 cut(s) 762, 791, 1100
XhoI CTCGAG 1 cut(s) 510
XmiI GTMKAC 1 cut(s) 519
XmnI GAANNNNTTC 1 cut(s) 1100
XspI CTAG 4 cut(s) 80, 480, 567, 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.