MD02G1002000.v1.1

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000113
Physical Location & Seq
Reverse (-)
165633 .. 166976
1344 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1002000.v1.1.491

Sequence Viewer

Length: 1344 bp
ATGGAAACCTTATTAGACCATTCCAGCATGCATAATAAACAAGATGATCACCGGCAGCTTCCTTATGAGATTGTGGAGGAAATTCTGCTGCAACTGCCGATGAAGTCCCTCCTTCGTTTCAGAAGCGTATGCAAGCCATGGCTTGCTCTCATCTCCGACCCAAAATTTGTCAAGTCACACCTCCTTATCCGCTCTACCAAACCAGATGTCGATGACCATGATTGTGATCATGATCATGATGCTCATGGCAAAACTACATCGTCAAGAGCACGACTCATGCTCTCCACTTTGCCCCTCCTTCAGTCCGTCCACGTACATATTCTCAATACCACTACTATTGATGCACCTGCAACGGCACCCTTGCCATCCCCTGGCGACGGTGAAGCAGAACCTATAGCAGAAGCAAAGGCAGAAACAGAAACAAAAGAAGAAGCAGCTGGCACAACTAGTGCTAATACTACTACTAAGGTTGTGGAGGAGGAGCATGAGTACCCTGTGACAATGAGGCGGCCTGTCGAAGACATGAAGATTGTCGGCTCTTGTAACGGCCTTGTGTGTTTGGTGCTTGCCTCGGAAGATATGATGATTTATAATCCATCCACCAGGCACGTTCATGCAGCCCCAAAGTTGATGACAATCTCCGATAAGGATTACTTCTATGGCTTCGGTTACGATTTGTGCAAGGACGATTATAAAATAGTAAGGGCCACTTCTTCAAGTAAGGCTGGCATTTTCGCCACCCAACTTGACATTTATTCTTTGAAGAACAATACTTGGAAAGCCAGAGCCGAAACCCTACCTTTTTACTTTCTGTTCAACGTGGTCGGAACTTTACTCAACGAGGCTCTCCACTGGGCAGTTCGCCGTGGAAAGACTACCGATCAAGTTGCCGCAGACGGTGATGATGAGAGGCCTTTCTCTATTGTTTCTTTCGATATAACGGAGGAGACGTACCGGCAAGTTCCCCTACCGGGCGACGGGGACAAAAAATTCTCGTTCTATGGTTTGGGGGTTTTAGGAGGGCGGATGAGTATGCTCCACAGCCCTCATGGGTCTGATTATCAGGTGTGGTTAATGAATGAGTATGGGGTCAAGGCATCTTGGTCTATTTTCACTACCATTCCGCAGAAGATGGATTCTGAATACCTAGGGCTGATGTCACTTCTGAGTATTTTGAGCAACGGTGAAATTCTAATCCTCTTGCATCAAAGGAAACTAGTCATTTACAATCCGGCAGACAGAAAGTTTCGAACCGTATTCTCCGGAGATGTACACTCTTCTCAAGTGGCTTTGTACATGGAGAGCCTTGTTTCACCCACCATGAAATACTCCATGATCAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

448

Amino Acids

50.2

Weight (kDa)

5.76

Isoelectric Point (pI)

46.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 57 9e-10 F-box domain
F-box-like PF12937 19 - 56 2.3e-07 F-box-like
FBA_3 PF08268 160 - 427 9.6e-20 F-box associated beta propeller domain
FBA_1 PF07734 172 - 438 2.3e-24 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 591, 693
AarI CACCTGC 1 cut(s) 355
Acc36I ACCTGC 1 cut(s) 355
AccB1I GGYRCC 1 cut(s) 355
AccB7I CCANNNNNTGG 1 cut(s) 371
AccBSI CCGCTC 1 cut(s) 192
AccIII TCCGGA 1 cut(s) 1262
AciI CCGC 5 cut(s) 190, 508, 891, 1024, 1124
AcsI RAATTY 4 cut(s) 81, 164, 989, 1188
AcuI CTGAAG 1 cut(s) 284
AfaI GTAC 5 cut(s) 315, 491, 953, 1272, 1295
AfiI CCNNNNNNNGG 4 cut(s) 371, 377, 971, 977
AgsI TTSAA 3 cut(s) 717, 763, 817
AhlI ACTAGT 2 cut(s) 446, 1216
AjnI CCWGG 2 cut(s) 370, 602
AluBI AGCT 3 cut(s) 58, 437, 1341
AluI AGCT 3 cut(s) 58, 437, 1341
Alw21I GWGCWC 1 cut(s) 271
Alw26I GTCTC 1 cut(s) 941
Aor13HI TCCGGA 1 cut(s) 1262
AoxI GGCC 4 cut(s) 509, 547, 705, 911
ApeKI GCWGC 4 cut(s) 55, 88, 434, 617
ApoI RAATTY 4 cut(s) 81, 164, 989, 1188
ArsI GACNNNNNNTTYG 4 cut(s) 149, 181, 192, 224
AspA2I CCTAGG 1 cut(s) 1147
AspS9I GGNCC 1 cut(s) 705
AsuC2I CCSGG 1 cut(s) 972
AsuHPI GGTGA 5 cut(s) 41, 392, 911, 1196, 1305
AsuII TTCGAA 1 cut(s) 1249
AvrII CCTAGG 1 cut(s) 1147
BanI GGYRCC 1 cut(s) 355
BbsI GAAGAC 1 cut(s) 525
Bbv12I GWGCWC 1 cut(s) 271
BbvI GCAGC 4 cut(s) 67, 75, 446, 629
BccI CCATC 3 cut(s) 373, 604, 1126
BceAI ACGGC 3 cut(s) 369, 562, 849
BcgI CGANNNNNNTGC 2 cut(s) 869, 903
BciT130I CCWGG 2 cut(s) 372, 604
BclI TGATCA 4 cut(s) 46, 226, 232, 1335
BcnI CCSGG 1 cut(s) 972
BcoDI GTCTC 1 cut(s) 941
BcuI ACTAGT 2 cut(s) 446, 1216
BfaI CTAG 4 cut(s) 447, 1148, 1217, 1342
BfmI CTRYAG 1 cut(s) 393
BfuAI ACCTGC 1 cut(s) 355
BisI GCNGC 6 cut(s) 56, 89, 435, 509, 618, 891
BlnI CCTAGG 1 cut(s) 1147
BlsI GCNGC 6 cut(s) 57, 90, 436, 510, 619, 892
Bme1390I CCNGG 3 cut(s) 372, 604, 972
BmgT120I GGNCC 1 cut(s) 705
BmiI GGNNCC 1 cut(s) 357
BmrFI CCNGG 3 cut(s) 372, 604, 972
BmrI ACTGGG 1 cut(s) 862
BmsI GCATC 4 cut(s) 229, 331, 1106, 1213
BmuI ACTGGG 1 cut(s) 862
BpiI GAAGAC 1 cut(s) 525
BplI GAGNNNNNCTC 2 cut(s) 258, 290
Bpu14I TTCGAA 1 cut(s) 1249
BpuEI CTTGAG 1 cut(s) 1266
BpuMI CCSGG 1 cut(s) 972
BsaAI YACGTR 1 cut(s) 313
BsaBI GATNNNNATC 3 cut(s) 225, 231, 635
BsaJI CCNNGG 5 cut(s) 137, 370, 570, 865, 1147
BsaWI WCCGGW 1 cut(s) 1262
BsaXI ACNNNNNCTCC 4 cut(s) 473, 503, 935, 965
Bsc4I CCNNNNNNNGG 4 cut(s) 371, 377, 971, 977
Bse118I RCCGGY 2 cut(s) 51, 954
Bse1I ACTGG 1 cut(s) 857
Bse8I GATNNNNATC 3 cut(s) 225, 231, 635
BseAI TCCGGA 1 cut(s) 1262
BseBI CCWGG 2 cut(s) 372, 604
BseDI CCNNGG 5 cut(s) 137, 370, 570, 865, 1147
BseGI GGATG 3 cut(s) 365, 596, 1032
BseJI GATNNNNATC 3 cut(s) 225, 231, 635
BseLI CCNNNNNNNGG 4 cut(s) 371, 377, 971, 977
BseMII CTCAG 1 cut(s) 1157
BseNI ACTGG 1 cut(s) 857
BseRI GAGGAG 3 cut(s) 491, 494, 959
BseXI GCAGC 4 cut(s) 67, 75, 446, 629
BshFI GGCC 4 cut(s) 511, 549, 707, 913
BshNI GGYRCC 1 cut(s) 355
BsiHKAI GWGCWC 1 cut(s) 271
BsiSI CCGG 5 cut(s) 52, 955, 971, 1232, 1263
BslFI GGGAC 2 cut(s) 91, 995
BslI CCNNNNNNNGG 4 cut(s) 371, 377, 971, 977
BsmAI GTCTC 1 cut(s) 941
BsmBI CGTCTC 1 cut(s) 941
BsmFI GGGAC 2 cut(s) 91, 995
BsnI GGCC 4 cut(s) 511, 549, 707, 913
Bsp119I TTCGAA 1 cut(s) 1249
Bsp1286I GDGCHC 1 cut(s) 271
Bsp13I TCCGGA 1 cut(s) 1262
Bsp1407I TGTACA 2 cut(s) 1270, 1293
Bsp143I GATC 5 cut(s) 46, 226, 232, 880, 1335
Bsp19I CCATGG 1 cut(s) 137
BspACI CCGC 5 cut(s) 190, 508, 891, 1024, 1124
BspANI GGCC 4 cut(s) 511, 549, 707, 913
BspCNI CTCAG 1 cut(s) 1158
BspEI TCCGGA 1 cut(s) 1262
BspHI TCATGA 2 cut(s) 229, 235
BspLI GGNNCC 1 cut(s) 357
BspMI ACCTGC 1 cut(s) 355
BspT104I TTCGAA 1 cut(s) 1249
BspT107I GGYRCC 1 cut(s) 355
BsrBI CCGCTC 1 cut(s) 192
BsrFI RCCGGY 2 cut(s) 51, 954
BsrGI TGTACA 2 cut(s) 1270, 1293
BsrI ACTGG 1 cut(s) 857
BssAI RCCGGY 2 cut(s) 51, 954
BssECI CCNNGG 5 cut(s) 137, 370, 570, 865, 1147
BssMI GATC 5 cut(s) 46, 226, 232, 880, 1335
BssT1I CCWWGG 2 cut(s) 137, 1147
Bst2UI CCWGG 2 cut(s) 372, 604
Bst4CI ACNGT 4 cut(s) 380, 899, 1184, 1255
Bst6I CTCTTC 1 cut(s) 1282
BstAUI TGTACA 2 cut(s) 1270, 1293
BstBAI YACGTR 1 cut(s) 313
BstBI TTCGAA 1 cut(s) 1249
BstC8I GCNNGC 6 cut(s) 29, 134, 144, 439, 567, 727
BstDEI CTNAG 2 cut(s) 465, 1166
BstDSI CCRYGG 2 cut(s) 137, 865
BstF5I GGATG 3 cut(s) 365, 596, 1032
BstKTI GATC 5 cut(s) 49, 229, 235, 883, 1338
BstMAI GTCTC 1 cut(s) 941
BstMBI GATC 5 cut(s) 46, 226, 232, 880, 1335
BstMWI GCNNNNNNNGC 1 cut(s) 94
BstNI CCWGG 2 cut(s) 372, 604
BstNSI RCATGY 1 cut(s) 31
BstSCI CCNGG 3 cut(s) 370, 602, 970
BstSFI CTRYAG 1 cut(s) 393
BstV1I GCAGC 4 cut(s) 67, 75, 446, 629
BstV2I GAAGAC 1 cut(s) 525
BsuRI GGCC 4 cut(s) 511, 549, 707, 913
BtgI CCRYGG 2 cut(s) 137, 865
BtsCI GGATG 3 cut(s) 365, 596, 1032
BtsIMutI CAGTG 1 cut(s) 850
BveI ACCTGC 1 cut(s) 355
Cac8I GCNNGC 6 cut(s) 29, 134, 144, 439, 567, 727
CciI TCATGA 2 cut(s) 229, 235
Cfr10I RCCGGY 2 cut(s) 51, 954
Cfr13I GGNCC 1 cut(s) 705
Csp6I GTAC 5 cut(s) 314, 490, 952, 1271, 1294
CspCI CAANNNNNGTGG 4 cut(s) 319, 354, 727, 762
CviQI GTAC 5 cut(s) 314, 490, 952, 1271, 1294
DdeI CTNAG 2 cut(s) 465, 1166
DpnI GATC 5 cut(s) 48, 228, 234, 882, 1337
DpnII GATC 5 cut(s) 46, 226, 232, 880, 1335
Eam1104I CTCTTC 1 cut(s) 1282
EarI CTCTTC 1 cut(s) 1282
EciI GGCGGA 1 cut(s) 1039
Eco130I CCWWGG 2 cut(s) 137, 1147
Eco147I AGGCCT 1 cut(s) 913
Eco57I CTGAAG 1 cut(s) 284
EcoRII CCWGG 2 cut(s) 370, 602
EcoT14I CCWWGG 2 cut(s) 137, 1147
EcoT22I ATGCAT 1 cut(s) 33
ErhI CCWWGG 2 cut(s) 137, 1147
Esp3I CGTCTC 1 cut(s) 941
FalI AAGNNNNNCTT 4 cut(s) 638, 670, 694, 726
FaqI GGGAC 2 cut(s) 91, 995
FbaI TGATCA 4 cut(s) 46, 226, 232, 1335
Fnu4HI GCNGC 6 cut(s) 56, 89, 435, 509, 618, 891
FokI GGATG 3 cut(s) 352, 583, 1039
Fsp4HI GCNGC 6 cut(s) 56, 89, 435, 509, 618, 891
FspBI CTAG 4 cut(s) 447, 1148, 1217, 1342
GluI GCNGC 6 cut(s) 56, 89, 435, 509, 618, 891
HaeIII GGCC 4 cut(s) 511, 549, 707, 913
HapII CCGG 5 cut(s) 52, 955, 971, 1232, 1263
HinfI GANTC 2 cut(s) 273, 1136
HpaII CCGG 5 cut(s) 52, 955, 971, 1232, 1263
HphI GGTGA 5 cut(s) 41, 392, 911, 1196, 1305
Hpy166II GTNNAC 2 cut(s) 310, 1273
Hpy188I TCNGA 8 cut(s) 122, 157, 574, 643, 827, 1057, 1141, 1167
Hpy188III TCNNGA 4 cut(s) 230, 236, 264, 1263
Hpy8I GTNNAC 2 cut(s) 310, 1273
Hpy99I CGWCG 2 cut(s) 380, 980
HpyAV CCTTC 2 cut(s) 122, 308
HpyCH4III ACNGT 4 cut(s) 380, 899, 1184, 1255
HpyCH4IV ACGT 4 cut(s) 312, 609, 819, 950
HpyCH4V TGCA 8 cut(s) 31, 91, 132, 344, 350, 617, 681, 1204
HpyF10VI GCNNNNNNNGC 1 cut(s) 94
HpyF3I CTNAG 2 cut(s) 465, 1166
HpySE526I ACGT 4 cut(s) 312, 609, 819, 950
Kpn2I TCCGGA 1 cut(s) 1262
Ksp22I TGATCA 4 cut(s) 46, 226, 232, 1335
Kzo9I GATC 5 cut(s) 46, 226, 232, 880, 1335
LmnI GCTCC 2 cut(s) 481, 1041
Lsp1109I GCAGC 4 cut(s) 67, 75, 446, 629
LweI GCATC 4 cut(s) 229, 331, 1106, 1213
MaeI CTAG 4 cut(s) 447, 1148, 1217, 1342
MaeII ACGT 4 cut(s) 312, 609, 819, 950
MaeIII GTNAC 5 cut(s) 174, 496, 542, 668, 1158
MalI GATC 5 cut(s) 48, 228, 234, 882, 1337
MbiI CCGCTC 1 cut(s) 192
MboI GATC 5 cut(s) 46, 226, 232, 880, 1335
MboII GAAGA 8 cut(s) 440, 530, 538, 587, 705, 775, 1141, 1269
MhlI GDGCHC 1 cut(s) 271
MluCI AATT 4 cut(s) 81, 164, 989, 1188
MlyI GAGTC 1 cut(s) 267
MmeI TCCRAC 2 cut(s) 180, 805
Mph1103I ATGCAT 1 cut(s) 33
MroI TCCGGA 1 cut(s) 1262
MseI TTAA 1 cut(s) 1073
MslI CAYNNNNRTG 3 cut(s) 222, 234, 612
MspA1I CMGCKG 1 cut(s) 437
MspI CCGG 5 cut(s) 52, 955, 971, 1232, 1263
MspR9I CCNGG 3 cut(s) 372, 604, 972
MvaI CCWGG 2 cut(s) 372, 604
MwoI GCNNNNNNNGC 1 cut(s) 94
NciI CCSGG 1 cut(s) 972
NcoI CCATGG 1 cut(s) 137
NdeII GATC 5 cut(s) 46, 226, 232, 880, 1335
NlaIV GGNNCC 1 cut(s) 357
NmuCI GTSAC 3 cut(s) 174, 496, 1158
NsiI ATGCAT 1 cut(s) 33
NspI RCATGY 1 cut(s) 31
NspV TTCGAA 1 cut(s) 1249
PaeI GCATGC 1 cut(s) 31
PagI TCATGA 2 cut(s) 229, 235
PaqCI CACCTGC 1 cut(s) 355
PceI AGGCCT 1 cut(s) 913
PcsI WCGNNNNNNNCGW 1 cut(s) 947
PfeI GAWTC 1 cut(s) 1136
PflMI CCANNNNNTGG 1 cut(s) 371
PkrI GCNGC 6 cut(s) 57, 90, 436, 510, 619, 892
PleI GAGTC 1 cut(s) 267
PpsI GAGTC 1 cut(s) 267
Ppu21I YACGTR 1 cut(s) 313
PsiI TTATAA 2 cut(s) 591, 693
Psp6I CCWGG 2 cut(s) 370, 602
PspGI CCWGG 2 cut(s) 370, 602
PspN4I GGNNCC 1 cut(s) 357
PspPI GGNCC 1 cut(s) 705
PvuII CAGCTG 1 cut(s) 437
RsaI GTAC 5 cut(s) 315, 491, 953, 1272, 1295
RsaNI GTAC 5 cut(s) 314, 490, 952, 1271, 1294
RseI CAYNNNNRTG 3 cut(s) 222, 234, 612
SaqAI TTAA 1 cut(s) 1073
SatI GCNGC 6 cut(s) 56, 89, 435, 509, 618, 891
Sau3AI GATC 5 cut(s) 46, 226, 232, 880, 1335
Sau96I GGNCC 1 cut(s) 705
SchI GAGTC 1 cut(s) 267
ScrFI CCNGG 3 cut(s) 372, 604, 972
SduI GDGCHC 1 cut(s) 271
SfaNI GCATC 4 cut(s) 229, 331, 1106, 1213
SfcI CTRYAG 1 cut(s) 393
SfuI TTCGAA 1 cut(s) 1249
SmiMI CAYNNNNRTG 3 cut(s) 222, 234, 612
SmlI CTYRAG 1 cut(s) 1281
SmoI CTYRAG 1 cut(s) 1281
SpeI ACTAGT 2 cut(s) 446, 1216
SphI GCATGC 1 cut(s) 31
Sse9I AATT 4 cut(s) 81, 164, 989, 1188
SseBI AGGCCT 1 cut(s) 913
SsiI CCGC 5 cut(s) 190, 508, 891, 1024, 1124
SspMI CTAG 4 cut(s) 447, 1148, 1217, 1342
StuI AGGCCT 1 cut(s) 913
StyD4I CCNGG 3 cut(s) 370, 602, 970
StyI CCWWGG 2 cut(s) 137, 1147
TaaI ACNGT 4 cut(s) 380, 899, 1184, 1255
TaiI ACGT 4 cut(s) 315, 612, 822, 953
TaqI TCGA 4 cut(s) 210, 516, 933, 1249
TasI AATT 4 cut(s) 81, 164, 989, 1188
TatI WGTACW 2 cut(s) 1270, 1293
TauI GCSGC 2 cut(s) 511, 893
TfiI GAWTC 1 cut(s) 1136
Tru1I TTAA 1 cut(s) 1073
Tru9I TTAA 1 cut(s) 1073
TscAI CASTG 1 cut(s) 857
TseFI GTSAC 3 cut(s) 174, 496, 1158
TseI GCWGC 4 cut(s) 55, 88, 434, 617
Tsp45I GTSAC 3 cut(s) 174, 496, 1158
TspDTI ATGAA 5 cut(s) 116, 539, 602, 1091, 1337
TspGWI ACGGA 2 cut(s) 295, 956
TspRI CASTG 1 cut(s) 857
Van91I CCANNNNNTGG 1 cut(s) 371
XapI RAATTY 4 cut(s) 81, 164, 989, 1188
XceI RCATGY 1 cut(s) 31
XcmI CCANNNNNNNNNTGG 1 cut(s) 1046
XmaJI CCTAGG 1 cut(s) 1147
XspI CTAG 4 cut(s) 447, 1148, 1217, 1342
Zsp2I ATGCAT 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.