Rroxscaffold_2G00094260

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000113
Physical Location & Seq
Forward (+)
15575289 .. 15577491
2203 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094260.1

Sequence Viewer

Length: 1182 bp
ATGGGGGACGGTGATGTCGTGCTTAGGCGAGTTCATACGGACTTCGGCGACTACGAGGAGGATGTGATTGCGGAGATCCTAGCGAGGCTACCGGTCAAATCCTTGATGCGATTCCGGTGCGTCTGCAAGTCATGGCGTGCTTTGATCTCTGATTCGTATTTTGTAAAGAAACACCTCAGCTACGGAGAGAGAGGCATCACCGAGAGCGCTCACAGGCTTATTTTCATGCTGGATCCTCCCTTGGTCTTGGACTATGAAGCCTTGAAAAGTATGAAGGATGATGATTATGGTGATGGTGCTTGTGCTCAGTTTGCTGTCACTCAGCTGGATTTTCCGGTTACCAAATCTATCCCTGATTCTGGTTATAGAGTTGGTGTGGGCTCTTGCAATGGCTTGGTATGTGTACAAGTTGATTTCGAGGCCATTATGTTATGGAACCCTTGTACTAGAGACTCCAAGATTTTACCAGAACCTCCCCGAGTTATAAACTCCGAGTATAGCTACTATTTTTATGGATTCGGGTATGATTCTGCTAGTGACGACTACAAGGTGATACGGGGGTTCGCTGATTATCTTGCTAAGAAAATCATGATTCACATCTTTTCACTGAAAACGGGTTCATGGGGGACTGTCGAAGACATTGATTATGTTACATTAATAACGCAGCAGGGGTTGTTCTTAAATGGAGCTCTGCATTGGTTGTATAATCTACCTGAAGGGGGCTCAAGAATTTTGTCTTTCGATTTAGAGGCGGAGAAATTTCATAAGAAGATTCCATTACCCTATGATGACTGGTTTTATGATCCCTTGATTCATAAAAATTGCCTCTGTGTACTTGCATGCCCAACTGGAACCAGCACTTTCAACATATGGATGATGAAAGAATATGGGGTCAAGGAATCCTGGACTGAAGTCTTACAATTTTCTTTGGAGAAGTATGCAGCCCATTATGATGATTTTAGAAGTTATTTCACGCCTGTGTGCATTTTAGAGAATGGTGTAGTTTTGATTGACGAGATGGGTGAGTGTGATTACCTCATGGTATTATCTAATCTAAAGGAGAAGGAATTCAAGCATGTTGTTGAGGTCGCAAAGAACTTGGAGTTTAGAACAGTCATTTACCGAGAGACATTAGCTTCACCAGAGGTCCACACATACAAAACCAACAATATTTGTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

393

Amino Acids

45.17

Weight (kDa)

5.17

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 56 1.9e-10 F-box domain
F-box-like PF12937 21 - 54 3.7e-07 F-box-like
FBA_3 PF08268 122 - 360 7.3e-24 F-box associated beta propeller domain
FBA_1 PF07734 126 - 372 7.8e-33 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 485
AasI GACNNNNNNGTC 1 cut(s) 14
AciI CCGC 2 cut(s) 71, 752
AclWI GGATC 4 cut(s) 70, 227, 240, 797
AcsI RAATTY 3 cut(s) 729, 758, 1067
AcuI CTGAAG 2 cut(s) 735, 930
AfaI GTAC 3 cut(s) 405, 445, 834
AfeI AGCGCT 1 cut(s) 208
AfiI CCNNNNNNNGG 2 cut(s) 359, 719
AgeI ACCGGT 1 cut(s) 91
AgsI TTSAA 3 cut(s) 265, 865, 1072
AjnI CCWGG 1 cut(s) 902
AleI CACNNNNGTG 1 cut(s) 977
AluBI AGCT 5 cut(s) 180, 325, 501, 689, 1136
AluI AGCT 5 cut(s) 180, 325, 501, 689, 1136
Alw21I GWGCWC 2 cut(s) 307, 691
Alw26I GTCTC 2 cut(s) 444, 1121
AlwI GGATC 4 cut(s) 70, 227, 240, 797
Ama87I CYCGRG 1 cut(s) 477
Aor51HI AGCGCT 1 cut(s) 208
AoxI GGCC 1 cut(s) 420
ApeKI GCWGC 2 cut(s) 664, 941
ApoI RAATTY 3 cut(s) 729, 758, 1067
AseI ATTAAT 1 cut(s) 656
AsiGI ACCGGT 1 cut(s) 91
Asp700I GAANNNNTTC 1 cut(s) 1067
AspLEI GCGC 1 cut(s) 209
AspS9I GGNCC 1 cut(s) 1147
AsuHPI GGTGA 6 cut(s) 23, 190, 302, 562, 1034, 1131
AvaI CYCGRG 1 cut(s) 477
AvaII GGWCC 1 cut(s) 1147
BaeI ACNNNNGTAYC 2 cut(s) 545, 578
BamHI GGATCC 1 cut(s) 232
BanII GRGCYC 3 cut(s) 383, 691, 725
BbsI GAAGAC 1 cut(s) 642
Bbv12I GWGCWC 2 cut(s) 307, 691
BbvCI CCTCAGC 1 cut(s) 176
BbvI GCAGC 2 cut(s) 676, 953
BccI CCATC 2 cut(s) 287, 1012
BcgI CGANNNNNNTGC 2 cut(s) 99, 133
BciT130I CCWGG 1 cut(s) 904
BcoDI GTCTC 2 cut(s) 444, 1121
BfaI CTAG 3 cut(s) 80, 447, 534
BfoI RGCGCY 1 cut(s) 210
BisI GCNGC 2 cut(s) 665, 942
BlsI GCNGC 2 cut(s) 666, 943
Bme1390I CCNGG 1 cut(s) 904
Bme18I GGWCC 1 cut(s) 1147
BmeT110I CYCGRG 1 cut(s) 477
BmgT120I GGNCC 1 cut(s) 1147
BmiI GGNNCC 3 cut(s) 234, 437, 853
BmrFI CCNGG 1 cut(s) 904
BmsI GCATC 2 cut(s) 96, 204
BoxI GACNNNNGTC 1 cut(s) 911
BpiI GAAGAC 1 cut(s) 642
Bpu10I CCTNAGC 2 cut(s) 23, 176
BpuEI CTTGAG 1 cut(s) 709
BsaBI GATNNNNATC 1 cut(s) 596
BsaJI CCNNGG 1 cut(s) 240
BsaWI WCCGGW 3 cut(s) 91, 114, 334
Bsc4I CCNNNNNNNGG 2 cut(s) 359, 719
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 2 cut(s) 797, 853
Bse3DI GCAATG 1 cut(s) 394
Bse8I GATNNNNATC 1 cut(s) 596
BseBI CCWGG 1 cut(s) 904
BseDI CCNNGG 1 cut(s) 240
BseGI GGATG 3 cut(s) 67, 283, 879
BseJI GATNNNNATC 1 cut(s) 596
BseLI CCNNNNNNNGG 2 cut(s) 359, 719
BseMI GCAATG 1 cut(s) 394
BseMII CTCAG 3 cut(s) 190, 320, 335
BseNI ACTGG 2 cut(s) 797, 853
BseRI GAGGAG 1 cut(s) 71
BseXI GCAGC 2 cut(s) 676, 953
BshFI GGCC 1 cut(s) 422
BshTI ACCGGT 1 cut(s) 91
BsiHKAI GWGCWC 2 cut(s) 307, 691
BsiHKCI CYCGRG 1 cut(s) 477
BsiSI CCGG 3 cut(s) 92, 115, 335
BslFI GGGAC 2 cut(s) 20, 640
BslI CCNNNNNNNGG 2 cut(s) 359, 719
BsmAI GTCTC 2 cut(s) 444, 1121
BsmFI GGGAC 2 cut(s) 20, 640
BsnI GGCC 1 cut(s) 422
BsoBI CYCGRG 1 cut(s) 477
Bsp1286I GDGCHC 4 cut(s) 307, 383, 691, 725
Bsp1407I TGTACA 1 cut(s) 403
Bsp143I GATC 4 cut(s) 75, 144, 232, 802
BspACI CCGC 2 cut(s) 71, 752
BspANI GGCC 1 cut(s) 422
BspCNI CTCAG 3 cut(s) 189, 319, 334
BspHI TCATGA 1 cut(s) 588
BspLI GGNNCC 3 cut(s) 234, 437, 853
BspPI GGATC 4 cut(s) 70, 227, 240, 797
BsrDI GCAATG 1 cut(s) 394
BsrFI RCCGGY 1 cut(s) 91
BsrGI TGTACA 1 cut(s) 403
BsrI ACTGG 2 cut(s) 797, 853
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 1 cut(s) 240
BssMI GATC 4 cut(s) 75, 144, 232, 802
BssT1I CCWWGG 1 cut(s) 240
Bst2UI CCWGG 1 cut(s) 904
Bst4CI ACNGT 3 cut(s) 11, 631, 1114
BstAUI TGTACA 1 cut(s) 403
BstC8I GCNNGC 2 cut(s) 138, 841
BstDEI CTNAG 5 cut(s) 23, 176, 306, 321, 579
BstEII GGTNACC 1 cut(s) 337
BstF5I GGATG 3 cut(s) 67, 283, 879
BstH2I RGCGCY 1 cut(s) 210
BstHHI GCGC 1 cut(s) 209
BstKTI GATC 4 cut(s) 78, 147, 235, 805
BstMAI GTCTC 2 cut(s) 444, 1121
BstMBI GATC 4 cut(s) 75, 144, 232, 802
BstMWI GCNNNNNNNGC 1 cut(s) 311
BstNI CCWGG 1 cut(s) 904
BstNSI RCATGY 2 cut(s) 843, 1079
BstPAI GACNNNNGTC 1 cut(s) 911
BstPI GGTNACC 1 cut(s) 337
BstSCI CCNGG 1 cut(s) 902
BstV1I GCAGC 2 cut(s) 676, 953
BstV2I GAAGAC 1 cut(s) 642
BstX2I RGATCY 2 cut(s) 75, 232
BstYI RGATCY 2 cut(s) 75, 232
BsuRI GGCC 1 cut(s) 422
BtsCI GGATG 3 cut(s) 67, 283, 879
BtsIMutI CAGTG 1 cut(s) 605
Cac8I GCNNGC 2 cut(s) 138, 841
CciI TCATGA 1 cut(s) 588
CfoI GCGC 1 cut(s) 209
Cfr10I RCCGGY 1 cut(s) 91
Cfr13I GGNCC 1 cut(s) 1147
CseI GACGC 1 cut(s) 109
Csp6I GTAC 3 cut(s) 404, 444, 833
CspAI ACCGGT 1 cut(s) 91
CviAII CATG 7 cut(s) 132, 226, 589, 621, 840, 1039, 1076
CviQI GTAC 3 cut(s) 404, 444, 833
DdeI CTNAG 5 cut(s) 23, 176, 306, 321, 579
DpnI GATC 4 cut(s) 77, 146, 234, 804
DpnII GATC 4 cut(s) 75, 144, 232, 802
DrdI GACNNNNNNGTC 1 cut(s) 14
DseDI GACNNNNNNGTC 1 cut(s) 14
EciI GGCGGA 1 cut(s) 767
Ecl136II GAGCTC 1 cut(s) 689
Eco130I CCWWGG 1 cut(s) 240
Eco24I GRGCYC 3 cut(s) 383, 691, 725
Eco47I GGWCC 1 cut(s) 1147
Eco47III AGCGCT 1 cut(s) 208
Eco53kI GAGCTC 1 cut(s) 689
Eco57I CTGAAG 2 cut(s) 735, 930
Eco88I CYCGRG 1 cut(s) 477
Eco91I GGTNACC 1 cut(s) 337
EcoICRI GAGCTC 1 cut(s) 689
EcoO65I GGTNACC 1 cut(s) 337
EcoRI GAATTC 1 cut(s) 1067
EcoRII CCWGG 1 cut(s) 902
EcoT14I CCWWGG 1 cut(s) 240
EcoT38I GRGCYC 3 cut(s) 383, 691, 725
ErhI CCWWGG 1 cut(s) 240
FaeI CATG 7 cut(s) 135, 229, 592, 624, 843, 1042, 1079
FaqI GGGAC 2 cut(s) 20, 640
FatI CATG 7 cut(s) 131, 225, 588, 620, 839, 1038, 1075
FauNDI CATATG 1 cut(s) 869
Fnu4HI GCNGC 2 cut(s) 665, 942
FokI GGATG 3 cut(s) 74, 290, 886
FriOI GRGCYC 3 cut(s) 383, 691, 725
Fsp4HI GCNGC 2 cut(s) 665, 942
FspBI CTAG 3 cut(s) 80, 447, 534
GlaI GCGC 1 cut(s) 208
GluI GCNGC 2 cut(s) 665, 942
HaeII RGCGCY 1 cut(s) 210
HaeIII GGCC 1 cut(s) 422
HapII CCGG 3 cut(s) 92, 115, 335
HgaI GACGC 1 cut(s) 109
HhaI GCGC 1 cut(s) 209
Hin1II CATG 7 cut(s) 135, 229, 592, 624, 843, 1042, 1079
Hin6I GCGC 1 cut(s) 207
HinP1I GCGC 1 cut(s) 207
HpaII CCGG 3 cut(s) 92, 115, 335
HphI GGTGA 6 cut(s) 23, 190, 302, 562, 1034, 1131
Hpy166II GTNNAC 3 cut(s) 404, 833, 1150
Hpy188I TCNGA 2 cut(s) 151, 493
Hpy188III TCNNGA 2 cut(s) 589, 726
Hpy8I GTNNAC 3 cut(s) 404, 833, 1150
HpyAV CCTTC 3 cut(s) 268, 710, 1057
HpyCH4III ACNGT 3 cut(s) 11, 631, 1114
HpyCH4V TGCA 6 cut(s) 126, 387, 694, 839, 941, 984
HpyF10VI GCNNNNNNNGC 1 cut(s) 311
HpyF3I CTNAG 5 cut(s) 23, 176, 306, 321, 579
Hsp92II CATG 7 cut(s) 135, 229, 592, 624, 843, 1042, 1079
HspAI GCGC 1 cut(s) 207
Kzo9I GATC 4 cut(s) 75, 144, 232, 802
LmnI GCTCC 1 cut(s) 686
Lsp1109I GCAGC 2 cut(s) 676, 953
LweI GCATC 2 cut(s) 96, 204
MaeI CTAG 3 cut(s) 80, 447, 534
MaeIII GTNAC 4 cut(s) 316, 337, 536, 649
MalI GATC 4 cut(s) 77, 146, 234, 804
MboI GATC 4 cut(s) 75, 144, 232, 802
MboII GAAGA 2 cut(s) 647, 781
MflI RGATCY 2 cut(s) 75, 232
MhlI GDGCHC 4 cut(s) 307, 383, 691, 725
MluCI AATT 5 cut(s) 729, 758, 820, 920, 1067
MlyI GAGTC 1 cut(s) 446
MroXI GAANNNNTTC 1 cut(s) 1067
MseI TTAA 2 cut(s) 656, 680
MslI CAYNNNNRTG 3 cut(s) 872, 951, 977
MspA1I CMGCKG 1 cut(s) 325
MspI CCGG 3 cut(s) 92, 115, 335
MspR9I CCNGG 1 cut(s) 904
MvaI CCWGG 1 cut(s) 904
MwoI GCNNNNNNNGC 1 cut(s) 311
NdeI CATATG 1 cut(s) 869
NdeII GATC 4 cut(s) 75, 144, 232, 802
NlaIII CATG 7 cut(s) 135, 229, 592, 624, 843, 1042, 1079
NlaIV GGNNCC 3 cut(s) 234, 437, 853
NmuCI GTSAC 2 cut(s) 316, 536
NspI RCATGY 2 cut(s) 843, 1079
OliI CACNNNNGTG 1 cut(s) 977
PaeI GCATGC 1 cut(s) 843
PagI TCATGA 1 cut(s) 588
PcsI WCGNNNNNNNCGW 2 cut(s) 15, 51
PdmI GAANNNNTTC 1 cut(s) 1067
PfeI GAWTC 9 cut(s) 111, 152, 356, 516, 527, 592, 772, 811, 899
PfoI TCCNGGA 1 cut(s) 902
PinAI ACCGGT 1 cut(s) 91
PkrI GCNGC 2 cut(s) 666, 943
PleI GAGTC 1 cut(s) 446
PpsI GAGTC 1 cut(s) 446
PshAI GACNNNNGTC 1 cut(s) 911
PshBI ATTAAT 1 cut(s) 656
PsiI TTATAA 1 cut(s) 485
Psp124BI GAGCTC 1 cut(s) 691
Psp6I CCWGG 1 cut(s) 902
PspEI GGTNACC 1 cut(s) 337
PspGI CCWGG 1 cut(s) 902
PspN4I GGNNCC 3 cut(s) 234, 437, 853
PspPI GGNCC 1 cut(s) 1147
PsuI RGATCY 2 cut(s) 75, 232
PvuII CAGCTG 1 cut(s) 325
RsaI GTAC 3 cut(s) 405, 445, 834
RsaNI GTAC 3 cut(s) 404, 444, 833
RseI CAYNNNNRTG 3 cut(s) 872, 951, 977
SacI GAGCTC 1 cut(s) 691
SaqAI TTAA 2 cut(s) 656, 680
SatI GCNGC 2 cut(s) 665, 942
Sau3AI GATC 4 cut(s) 75, 144, 232, 802
Sau96I GGNCC 1 cut(s) 1147
SchI GAGTC 1 cut(s) 446
ScrFI CCNGG 1 cut(s) 904
SduI GDGCHC 4 cut(s) 307, 383, 691, 725
SfaNI GCATC 2 cut(s) 96, 204
SinI GGWCC 1 cut(s) 1147
SmiMI CAYNNNNRTG 3 cut(s) 872, 951, 977
SmlI CTYRAG 1 cut(s) 724
SmoI CTYRAG 1 cut(s) 724
SphI GCATGC 1 cut(s) 843
Sse9I AATT 5 cut(s) 729, 758, 820, 920, 1067
SsiI CCGC 2 cut(s) 71, 752
SspI AATATT 1 cut(s) 1171
SspMI CTAG 3 cut(s) 80, 447, 534
SstI GAGCTC 1 cut(s) 691
StyD4I CCNGG 1 cut(s) 902
StyI CCWWGG 1 cut(s) 240
TaaI ACNGT 3 cut(s) 11, 631, 1114
TaqI TCGA 3 cut(s) 417, 633, 741
TasI AATT 5 cut(s) 729, 758, 820, 920, 1067
TatI WGTACW 3 cut(s) 403, 443, 832
TfiI GAWTC 9 cut(s) 111, 152, 356, 516, 527, 592, 772, 811, 899
Tru1I TTAA 2 cut(s) 656, 680
Tru9I TTAA 2 cut(s) 656, 680
TscAI CASTG 1 cut(s) 612
TseFI GTSAC 2 cut(s) 316, 536
TseI GCWGC 2 cut(s) 664, 941
Tsp45I GTSAC 2 cut(s) 316, 536
TspDTI ATGAA 8 cut(s) 23, 214, 270, 287, 609, 752, 803, 893
TspGWI ACGGA 2 cut(s) 53, 198
TspRI CASTG 1 cut(s) 612
VpaK11BI GGWCC 1 cut(s) 1147
VspI ATTAAT 1 cut(s) 656
XapI RAATTY 3 cut(s) 729, 758, 1067
XceI RCATGY 2 cut(s) 843, 1079
XmnI GAANNNNTTC 1 cut(s) 1067
XspI CTAG 3 cut(s) 80, 447, 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.