Rroxscaffold_4G00307900

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000113
Physical Location & Seq
Forward (+)
29361762 .. 29364875
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00307900.1

Sequence Viewer

Length: 969 bp
ATGTCGTGGTTGGTGATTCGGAAGAAGCCGAAGTTGCGGCACGCTCGGCGACTTGGTCGACGATGGCGAGCTGCGATCGGAGTAGAGGTCGGAGAGGTCGATGGTGGGGATTGGTTGGGCGTCGGGTCGGCATCCAAGGATTTGTCCCTAGACTGTGAAGCATTGAAGGAGTTGAAGGATGATGGAGATGCTCATCTTGCAATTAGAAAGCTAGAGTTTCCGAAAGACATGGTGTTATGGAACCCTTGTACTGGACAATCCAATTTGTTGCCAAAACCTACCGGTCATGTCACTTTGAAGCTTTGCGGAGTTGGTTATGATCTTACTATGAAGTTTTCCAGATTTGGTTATGATTCCACTAATGATGATTATAAGATCATCGGGTTTAGAATATGGATGATGAAGGAATATGGCGTCAAGGAATCGTGGGCTGAAGTTGGTTCTTTAGATATTTTATGTGAAGATTCTCAATTCTCACTTGTGACGCCTCTATGCATATTAGAGAATGGTGAAGATTTGATTAGGGCTGGGCATTTAAGCCCGAAAATCCGCAAACCAGGACCGGCCTGTCAAAGCGGTTTTCTACCCGATCGAAAGTCCGAAAGTCCGAAACTCACAAGAGGTGCCTTTCCTCCTCCAAAGTTGAAACCGAGCTCTCTCCTCCGCCCTAGCCGTGAGGTCAAGTTGCCAAGACACCAAACGGGCTCCGATCGAGACGCCGCCGGGATCGACACCGATCCTTCTCTCTCTTCACCGTACCGCACGACGCGGCCGACGCCTCGATCTTTCTCCTTCATAGATCGACGCACCGAGCCACCGAGTGAGACGGCGCCGGAGACGGCGCCCGGCCCGGCTCATTCACATGATGATGATGATGATGATTCTCAATATTCTGTTGATGTTTGGCTATTCGGGTTAAATTACAAGTTACCTCTATCTATGTTTCATTGGACTTTTCGTATGGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

322

Amino Acids

36.14

Weight (kDa)

8.14

Isoelectric Point (pI)

44.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 372
AasI GACNNNNNNGTC 1 cut(s) 567
AccB1I GGYRCC 3 cut(s) 623, 829, 841
AccI GTMKAC 1 cut(s) 58
AccII CGCG 1 cut(s) 769
AciI CCGC 8 cut(s) 37, 306, 550, 576, 664, 720, 760, 769
AclWI GGATC 2 cut(s) 731, 734
AcoI YGGCCR 1 cut(s) 770
AcuI CTGAAG 1 cut(s) 453
AcyI GRCGYC 7 cut(s) 120, 414, 485, 717, 776, 830, 842
AdeI CACNNNGTG 1 cut(s) 821
AfaI GTAC 2 cut(s) 250, 758
AfiI CCNNNNNNNGG 1 cut(s) 251
AgeI ACCGGT 1 cut(s) 281
AgsI TTSAA 4 cut(s) 166, 175, 298, 646
AjnI CCWGG 1 cut(s) 556
AluBI AGCT 4 cut(s) 71, 211, 301, 654
AluI AGCT 4 cut(s) 71, 211, 301, 654
Alw21I GWGCWC 1 cut(s) 656
Alw26I GTCTC 3 cut(s) 708, 818, 830
AlwI GGATC 2 cut(s) 731, 734
AoxI GGCC 3 cut(s) 564, 770, 847
ApeKI GCWGC 1 cut(s) 71
AsiGI ACCGGT 1 cut(s) 281
AspLEI GCGC 2 cut(s) 832, 844
AspS9I GGNCC 2 cut(s) 560, 848
AsuC2I CCSGG 3 cut(s) 724, 846, 851
AsuHPI GGTGA 3 cut(s) 25, 521, 744
AvaII GGWCC 1 cut(s) 560
BanI GGYRCC 3 cut(s) 623, 829, 841
BanII GRGCYC 2 cut(s) 656, 707
Bbv12I GWGCWC 1 cut(s) 656
BbvI GCAGC 1 cut(s) 58
BccI CCATC 3 cut(s) 57, 95, 176
BceAI ACGGC 3 cut(s) 657, 843, 855
BciT130I CCWGG 1 cut(s) 558
BcnI CCSGG 3 cut(s) 724, 846, 851
BcoDI GTCTC 3 cut(s) 708, 818, 830
BfaI CTAG 3 cut(s) 149, 212, 669
BfoI RGCGCY 2 cut(s) 833, 845
BisI GCNGC 4 cut(s) 38, 72, 720, 770
BlsI GCNGC 4 cut(s) 39, 73, 721, 771
Bme1390I CCNGG 4 cut(s) 558, 724, 846, 851
Bme18I GGWCC 1 cut(s) 560
BmgT120I GGNCC 2 cut(s) 560, 848
BmiI GGNNCC 5 cut(s) 242, 625, 706, 831, 843
BmrFI CCNGG 4 cut(s) 558, 724, 846, 851
BmsI GCATC 2 cut(s) 140, 178
BpuMI CCSGG 3 cut(s) 724, 846, 851
BsaBI GATNNNNATC 1 cut(s) 192
BsaHI GRCGYC 7 cut(s) 120, 414, 485, 717, 776, 830, 842
BsaJI CCNNGG 1 cut(s) 135
BsaWI WCCGGW 1 cut(s) 281
BsaXI ACNNNNNCTCC 2 cut(s) 72, 102
Bsc4I CCNNNNNNNGG 1 cut(s) 251
Bse118I RCCGGY 2 cut(s) 281, 562
Bse1I ACTGG 1 cut(s) 256
Bse8I GATNNNNATC 1 cut(s) 192
BseBI CCWGG 1 cut(s) 558
BseDI CCNNGG 1 cut(s) 135
BseGI GGATG 3 cut(s) 131, 184, 402
BseJI GATNNNNATC 1 cut(s) 192
BseLI CCNNNNNNNGG 1 cut(s) 251
BseNI ACTGG 1 cut(s) 256
BseRI GAGGAG 2 cut(s) 624, 650
BseX3I CGGCCG 1 cut(s) 770
BseXI GCAGC 1 cut(s) 58
BseYI CCCAGC 1 cut(s) 527
Bsh1236I CGCG 1 cut(s) 769
Bsh1285I CGRYCG 4 cut(s) 78, 592, 712, 773
BshFI GGCC 3 cut(s) 566, 772, 849
BshNI GGYRCC 3 cut(s) 623, 829, 841
BshTI ACCGGT 1 cut(s) 281
BsiEI CGRYCG 4 cut(s) 78, 592, 712, 773
BsiHKAI GWGCWC 1 cut(s) 656
BsiSI CCGG 6 cut(s) 282, 563, 723, 833, 846, 851
BslFI GGGAC 1 cut(s) 130
BslI CCNNNNNNNGG 1 cut(s) 251
BsmAI GTCTC 3 cut(s) 708, 818, 830
BsmBI CGTCTC 3 cut(s) 708, 818, 830
BsmFI GGGAC 1 cut(s) 130
BsnI GGCC 3 cut(s) 566, 772, 849
Bsp1286I GDGCHC 2 cut(s) 656, 707
Bsp143I GATC 9 cut(s) 75, 319, 375, 589, 709, 726, 736, 782, 799
BspACI CCGC 8 cut(s) 37, 306, 550, 576, 664, 720, 760, 769
BspANI GGCC 3 cut(s) 566, 772, 849
BspFNI CGCG 1 cut(s) 769
BspLI GGNNCC 5 cut(s) 242, 625, 706, 831, 843
BspPI GGATC 2 cut(s) 731, 734
BspT107I GGYRCC 3 cut(s) 623, 829, 841
BsrFI RCCGGY 2 cut(s) 281, 562
BsrI ACTGG 1 cut(s) 256
BssAI RCCGGY 2 cut(s) 281, 562
BssECI CCNNGG 1 cut(s) 135
BssMI GATC 9 cut(s) 75, 319, 375, 589, 709, 726, 736, 782, 799
BssNI GRCGYC 7 cut(s) 120, 414, 485, 717, 776, 830, 842
BssT1I CCWWGG 1 cut(s) 135
Bst2UI CCWGG 1 cut(s) 558
Bst4CI ACNGT 2 cut(s) 155, 756
Bst6I CTCTTC 1 cut(s) 754
BstACI GRCGYC 7 cut(s) 120, 414, 485, 717, 776, 830, 842
BstC8I GCNNGC 2 cut(s) 42, 69
BstF5I GGATG 3 cut(s) 131, 184, 402
BstFNI CGCG 1 cut(s) 769
BstH2I RGCGCY 2 cut(s) 833, 845
BstHHI GCGC 2 cut(s) 832, 844
BstKTI GATC 9 cut(s) 78, 322, 378, 592, 712, 729, 739, 785, 802
BstMAI GTCTC 3 cut(s) 708, 818, 830
BstMBI GATC 9 cut(s) 75, 319, 375, 589, 709, 726, 736, 782, 799
BstMCI CGRYCG 4 cut(s) 78, 592, 712, 773
BstMWI GCNNNNNNNGC 4 cut(s) 34, 46, 197, 775
BstNI CCWGG 1 cut(s) 558
BstSCI CCNGG 4 cut(s) 556, 722, 844, 849
BstUI CGCG 1 cut(s) 769
BstV1I GCAGC 1 cut(s) 58
BstZI CGGCCG 1 cut(s) 770
BsuRI GGCC 3 cut(s) 566, 772, 849
BtsCI GGATG 3 cut(s) 131, 184, 402
Cac8I GCNNGC 2 cut(s) 42, 69
CfoI GCGC 2 cut(s) 832, 844
Cfr10I RCCGGY 2 cut(s) 281, 562
Cfr13I GGNCC 2 cut(s) 560, 848
CseI GACGC 7 cut(s) 109, 403, 493, 725, 775, 784, 813
Csp6I GTAC 2 cut(s) 249, 757
CspAI ACCGGT 1 cut(s) 281
CviAII CATG 3 cut(s) 229, 287, 863
CviQI GTAC 2 cut(s) 249, 757
DinI GGCGCC 2 cut(s) 831, 843
DpnI GATC 9 cut(s) 77, 321, 377, 591, 711, 728, 738, 784, 801
DpnII GATC 9 cut(s) 75, 319, 375, 589, 709, 726, 736, 782, 799
DraIII CACNNNGTG 1 cut(s) 821
DrdI GACNNNNNNGTC 1 cut(s) 567
DseDI GACNNNNNNGTC 1 cut(s) 567
EaeI YGGCCR 1 cut(s) 770
EagI CGGCCG 1 cut(s) 770
Eam1104I CTCTTC 1 cut(s) 754
EarI CTCTTC 1 cut(s) 754
EciI GGCGGA 1 cut(s) 653
Ecl136II GAGCTC 1 cut(s) 654
EclXI CGGCCG 1 cut(s) 770
Eco130I CCWWGG 1 cut(s) 135
Eco24I GRGCYC 2 cut(s) 656, 707
Eco47I GGWCC 1 cut(s) 560
Eco52I CGGCCG 1 cut(s) 770
Eco53kI GAGCTC 1 cut(s) 654
Eco57I CTGAAG 1 cut(s) 453
EcoICRI GAGCTC 1 cut(s) 654
EcoRII CCWGG 1 cut(s) 556
EcoT14I CCWWGG 1 cut(s) 135
EcoT22I ATGCAT 1 cut(s) 497
EcoT38I GRGCYC 2 cut(s) 656, 707
EgeI GGCGCC 2 cut(s) 831, 843
EheI GGCGCC 2 cut(s) 831, 843
ErhI CCWWGG 1 cut(s) 135
Esp3I CGTCTC 3 cut(s) 708, 818, 830
FaeI CATG 3 cut(s) 232, 290, 866
FaqI GGGAC 1 cut(s) 130
FatI CATG 3 cut(s) 228, 286, 862
FblI GTMKAC 1 cut(s) 58
Fnu4HI GCNGC 4 cut(s) 38, 72, 720, 770
FokI GGATG 3 cut(s) 118, 191, 409
FriOI GRGCYC 2 cut(s) 656, 707
Fsp4HI GCNGC 4 cut(s) 38, 72, 720, 770
FspBI CTAG 3 cut(s) 149, 212, 669
GlaI GCGC 2 cut(s) 831, 843
GluI GCNGC 4 cut(s) 38, 72, 720, 770
GsaI CCCAGC 1 cut(s) 531
HaeII RGCGCY 2 cut(s) 833, 845
HaeIII GGCC 3 cut(s) 566, 772, 849
HapII CCGG 6 cut(s) 282, 563, 723, 833, 846, 851
HgaI GACGC 7 cut(s) 109, 403, 493, 725, 775, 784, 813
HhaI GCGC 2 cut(s) 832, 844
Hin1I GRCGYC 7 cut(s) 120, 414, 485, 717, 776, 830, 842
Hin1II CATG 3 cut(s) 232, 290, 866
Hin6I GCGC 2 cut(s) 830, 842
HinP1I GCGC 2 cut(s) 830, 842
HincII GTYRAC 1 cut(s) 59
HindII GTYRAC 1 cut(s) 59
HindIII AAGCTT 1 cut(s) 299
HinfI GANTC 5 cut(s) 16, 353, 422, 464, 881
HpaII CCGG 6 cut(s) 282, 563, 723, 833, 846, 851
HphI GGTGA 3 cut(s) 25, 521, 744
Hpy166II GTNNAC 1 cut(s) 59
Hpy188I TCNGA 7 cut(s) 21, 80, 92, 222, 601, 609, 709
Hpy188III TCNNGA 2 cut(s) 339, 713
Hpy8I GTNNAC 1 cut(s) 59
Hpy99I CGWCG 5 cut(s) 63, 125, 769, 778, 807
HpyAV CCTTC 5 cut(s) 160, 169, 397, 750, 802
HpyCH4III ACNGT 2 cut(s) 155, 756
HpyCH4V TGCA 2 cut(s) 200, 495
HpyF10VI GCNNNNNNNGC 4 cut(s) 34, 46, 197, 775
Hsp92I GRCGYC 7 cut(s) 120, 414, 485, 717, 776, 830, 842
Hsp92II CATG 3 cut(s) 232, 290, 866
HspAI GCGC 2 cut(s) 830, 842
KasI GGCGCC 2 cut(s) 829, 841
Kzo9I GATC 9 cut(s) 75, 319, 375, 589, 709, 726, 736, 782, 799
LmnI GCTCC 1 cut(s) 710
Lsp1109I GCAGC 1 cut(s) 58
LweI GCATC 2 cut(s) 140, 178
MaeI CTAG 3 cut(s) 149, 212, 669
MaeIII GTNAC 3 cut(s) 289, 481, 927
MalI GATC 9 cut(s) 77, 321, 377, 591, 711, 728, 738, 784, 801
MboI GATC 9 cut(s) 75, 319, 375, 589, 709, 726, 736, 782, 799
MboII GAAGA 4 cut(s) 34, 473, 524, 741
MhlI GDGCHC 2 cut(s) 656, 707
MluCI AATT 4 cut(s) 201, 262, 470, 919
Mly113I GGCGCC 2 cut(s) 830, 842
MmeI TCCRAC 1 cut(s) 70
Mph1103I ATGCAT 1 cut(s) 497
MseI TTAA 2 cut(s) 536, 917
MslI CAYNNNNRTG 2 cut(s) 861, 867
MspI CCGG 6 cut(s) 282, 563, 723, 833, 846, 851
MspR9I CCNGG 4 cut(s) 558, 724, 846, 851
MvaI CCWGG 1 cut(s) 558
MvnI CGCG 1 cut(s) 769
MwoI GCNNNNNNNGC 4 cut(s) 34, 46, 197, 775
NarI GGCGCC 2 cut(s) 830, 842
NciI CCSGG 3 cut(s) 724, 846, 851
NdeII GATC 9 cut(s) 75, 319, 375, 589, 709, 726, 736, 782, 799
NlaIII CATG 3 cut(s) 232, 290, 866
NlaIV GGNNCC 5 cut(s) 242, 625, 706, 831, 843
NmeAIII GCCGAG 1 cut(s) 25
NmuCI GTSAC 2 cut(s) 289, 481
NsiI ATGCAT 1 cut(s) 497
PcsI WCGNNNNNNNCGW 3 cut(s) 64, 96, 770
PfeI GAWTC 5 cut(s) 16, 353, 422, 464, 881
PflFI GACNNNGTC 1 cut(s) 54
PinAI ACCGGT 1 cut(s) 281
PkrI GCNGC 4 cut(s) 39, 73, 721, 771
Ple19I CGATCG 3 cut(s) 78, 592, 712
PluTI GGCGCC 2 cut(s) 833, 845
PsiI TTATAA 1 cut(s) 372
Psp124BI GAGCTC 1 cut(s) 656
Psp6I CCWGG 1 cut(s) 556
PspFI CCCAGC 1 cut(s) 527
PspGI CCWGG 1 cut(s) 556
PspN4I GGNNCC 5 cut(s) 242, 625, 706, 831, 843
PspPI GGNCC 2 cut(s) 560, 848
PsyI GACNNNGTC 1 cut(s) 54
PvuI CGATCG 3 cut(s) 78, 592, 712
RsaI GTAC 2 cut(s) 250, 758
RsaNI GTAC 2 cut(s) 249, 757
RseI CAYNNNNRTG 2 cut(s) 861, 867
SacI GAGCTC 1 cut(s) 656
SalI GTCGAC 1 cut(s) 57
SaqAI TTAA 2 cut(s) 536, 917
SatI GCNGC 4 cut(s) 38, 72, 720, 770
Sau3AI GATC 9 cut(s) 75, 319, 375, 589, 709, 726, 736, 782, 799
Sau96I GGNCC 2 cut(s) 560, 848
ScrFI CCNGG 4 cut(s) 558, 724, 846, 851
SduI GDGCHC 2 cut(s) 656, 707
SfaNI GCATC 2 cut(s) 140, 178
SfoI GGCGCC 2 cut(s) 831, 843
SinI GGWCC 1 cut(s) 560
SmiMI CAYNNNNRTG 2 cut(s) 861, 867
Sse9I AATT 4 cut(s) 201, 262, 470, 919
SsiI CCGC 8 cut(s) 37, 306, 550, 576, 664, 720, 760, 769
SspDI GGCGCC 2 cut(s) 829, 841
SspI AATATT 1 cut(s) 890
SspMI CTAG 3 cut(s) 149, 212, 669
SstI GAGCTC 1 cut(s) 656
StyD4I CCNGG 4 cut(s) 556, 722, 844, 849
StyI CCWWGG 1 cut(s) 135
TaaI ACNGT 2 cut(s) 155, 756
TaqI TCGA 7 cut(s) 58, 99, 592, 712, 729, 781, 802
TasI AATT 4 cut(s) 201, 262, 470, 919
TatI WGTACW 1 cut(s) 248
TauI GCSGC 3 cut(s) 40, 722, 772
TfiI GAWTC 5 cut(s) 16, 353, 422, 464, 881
Tru1I TTAA 2 cut(s) 536, 917
Tru9I TTAA 2 cut(s) 536, 917
TseFI GTSAC 2 cut(s) 289, 481
TseI GCWGC 1 cut(s) 71
Tsp45I GTSAC 2 cut(s) 289, 481
TspDTI ATGAA 4 cut(s) 344, 416, 784, 935
Tth111I GACNNNGTC 1 cut(s) 54
VpaK11BI GGWCC 1 cut(s) 560
XmiI GTMKAC 1 cut(s) 58
XspI CTAG 3 cut(s) 149, 212, 669
Zsp2I ATGCAT 1 cut(s) 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.