FvH4_2g08290

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000113
Physical Location & Seq
Reverse (-)
7206839 .. 7209305
2467 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g08290.t1

Sequence Viewer

Length: 1164 bp
ATGGGGGACGGCGATGTGGTGCTTAAGCGAGCTCATACGGACTTTAACGACTACGAGGAAGATGTGATTGCGGAGATCCTAGCAAGGCTACCGGTCAAATCCTTGAAGCGATTCCAGTGCGTGTGCAAGTCATGGCGTGCTTTGATCTCCGATTCCTATTTTGTAAAGAAACACCTCAGCTACGTAGAGAGAGGCATCACCGAGAGCGCGCACAATCTCATTTTCATGGTGGATCCTCCCTTGGCCTTGGACTGTGAAGCCTCGAAAAGTATGGAGGAGGACTCTGTATCCTTGGACTGTGAGGCCTTGAGAAGTATGGAGTACTATGAAGTCTTGAAAAGTACTGAGCACTTGATGTGTATGGAGGACTATGAAGCCATGGAAAGAATTAAGAAATATGTTGATGGTAGCAGTCAGTTTGCAGTCACCCGGTTGGATTTTCCGGTACGGAAAACTATCAATGATTTCGGTTGTAGAGAACTAGTTGGTGCTTGCAATGGCTTGGTATGTGTTAAATACCCTTGTAACGACGGAGACTCCAAGGCCATCATGTTGTGGAACCCTTGTACTAGAGACTACAAGGTTTTACCAAAACCTCCTCTAGTTATACACTCCACGTTTAGCAACTATGTTTATGGATTTGGGTATGATCCTGCTAATGACGACTACAAGGTCATATGGGGGCTCACTTGTGACTCAAATGATGCTAAGGAAATCATGATTCACATCTTTTCACTGAAAACAGGATCATGGAGGACTATCAAGGACACTGATTATGTTAGAGTAATCACATGCGAGGGGTTGTTCTTAAACGGAGCTCTGCATTGGTTATATTGTCCACCCAACGGGGGCTCAGGAATTTTGTCTTTTGATTTAGGGGTAGAAAAGTTTCAGAAGACGATTCCATTGCCCTATGATGACTGGTTTTCCGATCCATTGATTCATAGACATTGTCTCTGTGTATGCACTCGCCCAGCTGGAGCCAATAGTATCAACATATGGATGATGAAAGAATATGGGGTCAAGGAGTCCTGGACTGAAGTAGTACAATTTTCTTTGGAGAGTTATCAAATGCCTGCTGATGACAGAAAATATTTCAGGCCTTTGCACATTTTAGAGGATGGTGTAGTCGTGATTGACAAGATGCCTCATTCTGTTATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

388

Amino Acids

44.28

Weight (kDa)

5.28

Isoelectric Point (pI)

38.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 56 7.8e-09 F-box domain
F-box-like PF12937 21 - 54 2.4e-06 F-box-like
FBA_3 PF08268 157 - 358 1.1e-23 F-box associated beta propeller domain
FBA_1 PF07734 162 - 366 1.1e-28 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 671
AccII CGCG 1 cut(s) 209
AciI CCGC 1 cut(s) 71
AclWI GGATC 6 cut(s) 70, 227, 240, 644, 754, 926
AcsI RAATTY 1 cut(s) 858
AcuI CTGAAG 1 cut(s) 1059
AfaI GTAC 5 cut(s) 323, 343, 447, 568, 1047
AfiI CCNNNNNNNGG 2 cut(s) 845, 848
AflII CTTAAG 1 cut(s) 23
AgeI ACCGGT 1 cut(s) 91
AgsI TTSAA 2 cut(s) 106, 337
AhlI ACTAGT 1 cut(s) 481
AjnI CCWGG 1 cut(s) 1031
AluBI AGCT 4 cut(s) 32, 180, 818, 977
AluI AGCT 4 cut(s) 32, 180, 818, 977
Alw21I GWGCWC 3 cut(s) 34, 351, 820
Alw26I GTCTC 3 cut(s) 528, 567, 959
AlwI GGATC 6 cut(s) 70, 227, 240, 644, 754, 926
AoxI GGCC 4 cut(s) 243, 303, 543, 1100
ApoI RAATTY 1 cut(s) 858
AsiGI ACCGGT 1 cut(s) 91
Asp700I GAANNNNTTC 2 cut(s) 110, 888
AspLEI GCGC 2 cut(s) 209, 211
AsuC2I CCSGG 1 cut(s) 430
AsuHPI GGTGA 2 cut(s) 190, 418
BamHI GGATCC 1 cut(s) 232
BanII GRGCYC 4 cut(s) 34, 687, 820, 854
BbsI GAAGAC 1 cut(s) 902
Bbv12I GWGCWC 3 cut(s) 34, 351, 820
BbvCI CCTCAGC 1 cut(s) 176
BccI CCATC 3 cut(s) 398, 554, 1115
BceAI ACGGC 1 cut(s) 25
BcgI CGANNNNNNTGC 4 cut(s) 99, 133, 889, 923
BciT130I CCWGG 1 cut(s) 1033
BciVI GTATCC 1 cut(s) 298
BcnI CCSGG 1 cut(s) 430
BcoDI GTCTC 3 cut(s) 528, 567, 959
BcuI ACTAGT 1 cut(s) 481
BfaI CTAG 4 cut(s) 80, 482, 570, 602
BfrI CTTAAG 1 cut(s) 23
BfuI GTATCC 1 cut(s) 298
BmcAI AGTACT 2 cut(s) 323, 343
Bme1390I CCNGG 2 cut(s) 430, 1033
BmiI GGNNCC 3 cut(s) 234, 560, 982
BmrFI CCNGG 2 cut(s) 430, 1033
BmsI GCATC 3 cut(s) 204, 694, 1134
BpiI GAAGAC 1 cut(s) 902
BplI GAGNNNNNCTC 2 cut(s) 266, 298
BpmI CTGGAG 1 cut(s) 999
Bpu10I CCTNAGC 3 cut(s) 176, 708, 853
BpuEI CTTGAG 1 cut(s) 328
BpuMI CCSGG 1 cut(s) 430
BsaAI YACGTR 1 cut(s) 184
BsaBI GATNNNNATC 1 cut(s) 725
BsaJI CCNNGG 5 cut(s) 240, 246, 291, 378, 540
BsaWI WCCGGW 2 cut(s) 91, 442
BsaXI ACNNNNNCTCC 2 cut(s) 521, 551
Bsc4I CCNNNNNNNGG 2 cut(s) 845, 848
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 2 cut(s) 115, 926
Bse3DI GCAATG 2 cut(s) 502, 905
Bse8I GATNNNNATC 1 cut(s) 725
BseBI CCWGG 1 cut(s) 1033
BseDI CCNNGG 5 cut(s) 240, 246, 291, 378, 540
BseGI GGATG 2 cut(s) 1008, 1126
BseJI GATNNNNATC 1 cut(s) 725
BseLI CCNNNNNNNGG 2 cut(s) 845, 848
BseMI GCAATG 2 cut(s) 502, 905
BseMII CTCAG 3 cut(s) 190, 336, 867
BseNI ACTGG 2 cut(s) 115, 926
BsePI GCGCGC 1 cut(s) 207
BseRI GAGGAG 2 cut(s) 290, 588
BseYI CCCAGC 1 cut(s) 973
Bsh1236I CGCG 1 cut(s) 209
BshFI GGCC 4 cut(s) 245, 305, 545, 1102
BshTI ACCGGT 1 cut(s) 91
BsiHKAI GWGCWC 3 cut(s) 34, 351, 820
BsiSI CCGG 3 cut(s) 92, 430, 443
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 2 cut(s) 845, 848
BsmAI GTCTC 3 cut(s) 528, 567, 959
BsmFI GGGAC 1 cut(s) 20
BsnI GGCC 4 cut(s) 245, 305, 545, 1102
Bsp1286I GDGCHC 5 cut(s) 34, 351, 687, 820, 854
Bsp143I GATC 6 cut(s) 75, 144, 232, 649, 746, 931
Bsp19I CCATGG 1 cut(s) 378
BspACI CCGC 1 cut(s) 71
BspANI GGCC 4 cut(s) 245, 305, 545, 1102
BspCNI CTCAG 3 cut(s) 189, 337, 866
BspFNI CGCG 1 cut(s) 209
BspHI TCATGA 1 cut(s) 717
BspLI GGNNCC 3 cut(s) 234, 560, 982
BspPI GGATC 6 cut(s) 70, 227, 240, 644, 754, 926
BspTI CTTAAG 1 cut(s) 23
BsrDI GCAATG 2 cut(s) 502, 905
BsrFI RCCGGY 1 cut(s) 91
BsrI ACTGG 2 cut(s) 115, 926
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 5 cut(s) 240, 246, 291, 378, 540
BssHII GCGCGC 1 cut(s) 207
BssMI GATC 6 cut(s) 75, 144, 232, 649, 746, 931
BssT1I CCWWGG 5 cut(s) 240, 246, 291, 378, 540
Bst2UI CCWGG 1 cut(s) 1033
Bst4CI ACNGT 2 cut(s) 254, 299
BstAFI CTTAAG 1 cut(s) 23
BstBAI YACGTR 1 cut(s) 184
BstC8I GCNNGC 5 cut(s) 30, 138, 209, 493, 1077
BstDEI CTNAG 4 cut(s) 176, 345, 708, 853
BstDSI CCRYGG 1 cut(s) 378
BstF5I GGATG 2 cut(s) 1008, 1126
BstFNI CGCG 1 cut(s) 209
BstHHI GCGC 2 cut(s) 209, 211
BstKTI GATC 6 cut(s) 78, 147, 235, 652, 749, 934
BstMAI GTCTC 3 cut(s) 528, 567, 959
BstMBI GATC 6 cut(s) 75, 144, 232, 649, 746, 931
BstNI CCWGG 1 cut(s) 1033
BstNSI RCATGY 1 cut(s) 795
BstSCI CCNGG 2 cut(s) 428, 1031
BstSNI TACGTA 1 cut(s) 184
BstUI CGCG 1 cut(s) 209
BstV2I GAAGAC 1 cut(s) 902
BstX2I RGATCY 2 cut(s) 75, 232
BstYI RGATCY 2 cut(s) 75, 232
BsuI GTATCC 1 cut(s) 298
BsuRI GGCC 4 cut(s) 245, 305, 545, 1102
BtgI CCRYGG 1 cut(s) 378
BtgZI GCGATG 1 cut(s) 27
BtsCI GGATG 2 cut(s) 1008, 1126
BtsIMutI CAGTG 3 cut(s) 122, 734, 768
Cac8I GCNNGC 5 cut(s) 30, 138, 209, 493, 1077
CciI TCATGA 1 cut(s) 717
CfoI GCGC 2 cut(s) 209, 211
Cfr10I RCCGGY 1 cut(s) 91
Csp6I GTAC 5 cut(s) 322, 342, 446, 567, 1046
CspAI ACCGGT 1 cut(s) 91
CviAII CATG 7 cut(s) 132, 226, 379, 550, 718, 750, 792
CviQI GTAC 5 cut(s) 322, 342, 446, 567, 1046
DdeI CTNAG 4 cut(s) 176, 345, 708, 853
DpnI GATC 6 cut(s) 77, 146, 234, 651, 748, 933
DpnII GATC 6 cut(s) 75, 144, 232, 649, 746, 931
DrdI GACNNNNNNGTC 1 cut(s) 671
DseDI GACNNNNNNGTC 1 cut(s) 671
Ecl136II GAGCTC 2 cut(s) 32, 818
Eco105I TACGTA 1 cut(s) 184
Eco130I CCWWGG 5 cut(s) 240, 246, 291, 378, 540
Eco147I AGGCCT 2 cut(s) 305, 1102
Eco24I GRGCYC 4 cut(s) 34, 687, 820, 854
Eco53kI GAGCTC 2 cut(s) 32, 818
Eco57I CTGAAG 1 cut(s) 1059
EcoICRI GAGCTC 2 cut(s) 32, 818
EcoRII CCWGG 1 cut(s) 1031
EcoT14I CCWWGG 5 cut(s) 240, 246, 291, 378, 540
EcoT38I GRGCYC 4 cut(s) 34, 687, 820, 854
ErhI CCWWGG 5 cut(s) 240, 246, 291, 378, 540
FaeI CATG 7 cut(s) 135, 229, 382, 553, 721, 753, 795
FaqI GGGAC 1 cut(s) 20
FatI CATG 7 cut(s) 131, 225, 378, 549, 717, 749, 791
FauNDI CATATG 2 cut(s) 677, 998
FokI GGATG 2 cut(s) 1015, 1133
FriOI GRGCYC 4 cut(s) 34, 687, 820, 854
FspBI CTAG 4 cut(s) 80, 482, 570, 602
GlaI GCGC 2 cut(s) 208, 210
GsaI CCCAGC 1 cut(s) 977
GsuI CTGGAG 1 cut(s) 999
HaeIII GGCC 4 cut(s) 245, 305, 545, 1102
HapII CCGG 3 cut(s) 92, 430, 443
HhaI GCGC 2 cut(s) 209, 211
Hin1II CATG 7 cut(s) 135, 229, 382, 553, 721, 753, 795
Hin6I GCGC 2 cut(s) 207, 209
HinP1I GCGC 2 cut(s) 207, 209
HinfI GANTC 9 cut(s) 111, 152, 281, 536, 695, 721, 901, 940, 1028
HpaII CCGG 3 cut(s) 92, 430, 443
HphI GGTGA 2 cut(s) 190, 418
Hpy166II GTNNAC 1 cut(s) 839
Hpy188I TCNGA 3 cut(s) 151, 894, 931
Hpy188III TCNNGA 4 cut(s) 334, 718, 855, 1132
Hpy8I GTNNAC 1 cut(s) 839
Hpy99I CGWCG 1 cut(s) 533
HpyCH4III ACNGT 2 cut(s) 254, 299
HpyCH4IV ACGT 2 cut(s) 183, 617
HpyCH4V TGCA 6 cut(s) 126, 422, 495, 823, 966, 1108
HpyF3I CTNAG 4 cut(s) 176, 345, 708, 853
HpySE526I ACGT 2 cut(s) 183, 617
Hsp92II CATG 7 cut(s) 135, 229, 382, 553, 721, 753, 795
HspAI GCGC 2 cut(s) 207, 209
Kzo9I GATC 6 cut(s) 75, 144, 232, 649, 746, 931
LmnI GCTCC 2 cut(s) 815, 980
LweI GCATC 3 cut(s) 204, 694, 1134
MaeI CTAG 4 cut(s) 80, 482, 570, 602
MaeII ACGT 2 cut(s) 183, 617
MaeIII GTNAC 3 cut(s) 424, 524, 692
MalI GATC 6 cut(s) 77, 146, 234, 651, 748, 933
MboI GATC 6 cut(s) 75, 144, 232, 649, 746, 931
MboII GAAGA 2 cut(s) 71, 907
MflI RGATCY 2 cut(s) 75, 232
MhlI GDGCHC 5 cut(s) 34, 351, 687, 820, 854
MluCI AATT 3 cut(s) 387, 858, 1049
MlyI GAGTC 4 cut(s) 275, 530, 689, 1037
MmeI TCCRAC 1 cut(s) 414
MroXI GAANNNNTTC 2 cut(s) 110, 888
MseI TTAA 5 cut(s) 24, 45, 390, 513, 809
MslI CAYNNNNRTG 2 cut(s) 224, 1001
MspA1I CMGCKG 1 cut(s) 977
MspCI CTTAAG 1 cut(s) 23
MspI CCGG 3 cut(s) 92, 430, 443
MspR9I CCNGG 2 cut(s) 430, 1033
MvaI CCWGG 1 cut(s) 1033
MvnI CGCG 1 cut(s) 209
NciI CCSGG 1 cut(s) 430
NcoI CCATGG 1 cut(s) 378
NdeI CATATG 2 cut(s) 677, 998
NdeII GATC 6 cut(s) 75, 144, 232, 649, 746, 931
NlaIII CATG 7 cut(s) 135, 229, 382, 553, 721, 753, 795
NlaIV GGNNCC 3 cut(s) 234, 560, 982
NmuCI GTSAC 2 cut(s) 424, 692
NspI RCATGY 1 cut(s) 795
PagI TCATGA 1 cut(s) 717
PauI GCGCGC 1 cut(s) 207
PceI AGGCCT 2 cut(s) 305, 1102
PdmI GAANNNNTTC 2 cut(s) 110, 888
PfeI GAWTC 5 cut(s) 111, 152, 721, 901, 940
PflFI GACNNNGTC 1 cut(s) 951
PfoI TCCNGGA 1 cut(s) 1031
PinAI ACCGGT 1 cut(s) 91
PleI GAGTC 4 cut(s) 275, 530, 689, 1036
PpsI GAGTC 4 cut(s) 275, 530, 689, 1036
Ppu21I YACGTR 1 cut(s) 184
Psp124BI GAGCTC 2 cut(s) 34, 820
Psp6I CCWGG 1 cut(s) 1031
PspFI CCCAGC 1 cut(s) 973
PspGI CCWGG 1 cut(s) 1031
PspN4I GGNNCC 3 cut(s) 234, 560, 982
PsuI RGATCY 2 cut(s) 75, 232
PsyI GACNNNGTC 1 cut(s) 951
PteI GCGCGC 1 cut(s) 207
PvuII CAGCTG 1 cut(s) 977
RsaI GTAC 5 cut(s) 323, 343, 447, 568, 1047
RsaNI GTAC 5 cut(s) 322, 342, 446, 567, 1046
RseI CAYNNNNRTG 2 cut(s) 224, 1001
SacI GAGCTC 2 cut(s) 34, 820
SaqAI TTAA 5 cut(s) 24, 45, 390, 513, 809
Sau3AI GATC 6 cut(s) 75, 144, 232, 649, 746, 931
ScaI AGTACT 2 cut(s) 323, 343
SchI GAGTC 4 cut(s) 275, 530, 689, 1037
ScrFI CCNGG 2 cut(s) 430, 1033
SduI GDGCHC 5 cut(s) 34, 351, 687, 820, 854
SfaNI GCATC 3 cut(s) 204, 694, 1134
SmiMI CAYNNNNRTG 2 cut(s) 224, 1001
SmlI CTYRAG 2 cut(s) 23, 307
SmoI CTYRAG 2 cut(s) 23, 307
SnaBI TACGTA 1 cut(s) 184
SpeI ACTAGT 1 cut(s) 481
Sse9I AATT 3 cut(s) 387, 858, 1049
SseBI AGGCCT 2 cut(s) 305, 1102
SsiI CCGC 1 cut(s) 71
SspI AATATT 1 cut(s) 1094
SspMI CTAG 4 cut(s) 80, 482, 570, 602
SstI GAGCTC 2 cut(s) 34, 820
StuI AGGCCT 2 cut(s) 305, 1102
StyD4I CCNGG 2 cut(s) 428, 1031
StyI CCWWGG 5 cut(s) 240, 246, 291, 378, 540
TaaI ACNGT 2 cut(s) 254, 299
TaiI ACGT 2 cut(s) 186, 620
TaqI TCGA 1 cut(s) 263
TasI AATT 3 cut(s) 387, 858, 1049
TatI WGTACW 4 cut(s) 321, 341, 566, 1045
TfiI GAWTC 5 cut(s) 111, 152, 721, 901, 940
Tru1I TTAA 5 cut(s) 24, 45, 390, 513, 809
Tru9I TTAA 5 cut(s) 24, 45, 390, 513, 809
TscAI CASTG 3 cut(s) 122, 741, 775
TseFI GTSAC 2 cut(s) 424, 692
Tsp45I GTSAC 2 cut(s) 424, 692
TspDTI ATGAA 5 cut(s) 214, 342, 387, 932, 1022
TspGWI ACGGA 4 cut(s) 53, 463, 546, 828
TspRI CASTG 3 cut(s) 122, 741, 775
Tth111I GACNNNGTC 1 cut(s) 951
Vha464I CTTAAG 1 cut(s) 23
XapI RAATTY 1 cut(s) 858
XceI RCATGY 1 cut(s) 795
XmnI GAANNNNTTC 2 cut(s) 110, 888
XspI CTAG 4 cut(s) 80, 482, 570, 602
ZrmI AGTACT 2 cut(s) 323, 343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.