pycom09g06390

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0000113
Physical Location & Seq
Forward (+)
4698474 .. 4699631
1158 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g06390.1

Sequence Viewer

Length: 1158 bp
ATGGCGGACGGCGTCCTCCTGGAACGAGAGACGCAACTGGTGCCCTCTGATGATGGCGCCTGTATTTTCAACAATGACATCATCCTTGAGATACTGTCATGGGTTCCAGGGAAATCCTTACTACGATGTCGGCGTGTATGCAAGTCATGGTGTACCTTAATCGCCGACCCTAATTTTGTTAGAAAACAGCGCAGCCAAGCAGTTAGACACAGCACCAACTTGAGGCTGCTAATGTTTACAAACAGGCGGCATATTCTGATAAAGTCGATAGACTACGAATCATTACTGTCATTTTTAACGAAGAACAAGCACGAAAATATTAGTCGTGTAGTTGTTCCACGCTGCAGAAGGCACAAATTACCATTAACGCAGCCTGACAACAGAAATGCGCGGATCATGGGTTCTAGCAATGGCCTGGTTTGTCTTTTTATAAATTGCCATTACACTTTGTTGTGGAATCCTTGTACTGGCAATTCCAAGGAGATACCAAAACCCAGTCCAGAACCTTTCCTTCCAGCATTTTATGGATTTGGTTACGATTCTGCGACTGATGATTACAAAGTCATTTGCAACTGTCCAAGTGCAGATCGAACCTATGAAGTTTTTGTCTTCACACTGAAAACGGGTTCATGGAGGATTGTTGAAGGTCTCGATCATATTGAGGACGAGCGGGGTTTGTTGTTGAACGGCGCCCTACATTGGCTAAACGTTAAACGTCGTGCAGATGGATCAATAGATCCGAAATCAATAACAATAACCTCTTTCGATTTAGCAAAGGAAAATTTTCAGGAGCTAGTGTCGTTACCCAATGTTCTCGGAGATATATTTCTGGGGGCAGATCTTGGGGTTTACAAAAGTTCTCACCTTTTGTGTTCATTTGACAATTTCAGATTTGGGAATACAGAAATATGGGTGATGATGGAATATGGAGTTGAACAATCTTGGACCAAACTGATTGTGCTGAAAGATCAAGACCTTTCACATCCCGTGTACGTTTCAGAGGATGATAAAGTTTTCATAGCCTTAAGAGAGGGTGACTTAAAATTATATGATTTAAAGGAAAACAGATACAGAAGTGTTCTTAAACCTAAAAAGCAGCTCAGGCTTGCATTTGCTCTATATGTAGAGACTTTAGTTTCACCAGCAACTGGGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

386

Amino Acids

44.04

Weight (kDa)

8.4

Isoelectric Point (pI)

46.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 25 - 61 1.5e-09 F-box domain
F-box-like PF12937 25 - 59 8.5e-09 F-box-like
FBA_3 PF08268 96 - 330 2.7e-22 F-box associated beta propeller domain
FBA_1 PF07734 121 - 354 2.4e-28 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 431
AccB1I GGYRCC 3 cut(s) 40, 56, 689
AccB7I CCANNNNNTGG 1 cut(s) 1148
AccBSI CCGCTC 1 cut(s) 670
AccII CGCG 1 cut(s) 391
AciI CCGC 4 cut(s) 5, 247, 391, 670
AclI AACGTT 1 cut(s) 708
AclWI GGATC 3 cut(s) 401, 731, 736
AcsI RAATTY 1 cut(s) 781
AcyI GRCGYC 3 cut(s) 12, 57, 690
AfaI GTAC 3 cut(s) 154, 466, 992
AfiI CCNNNNNNNGG 4 cut(s) 222, 467, 699, 1148
AflII CTTAAG 1 cut(s) 1024
AgsI TTSAA 4 cut(s) 70, 644, 685, 935
AjnI CCWGG 3 cut(s) 18, 106, 414
AloI GAACNNNNNNTCC 2 cut(s) 385, 417
AluBI AGCT 2 cut(s) 793, 1099
AluI AGCT 2 cut(s) 793, 1099
Alw26I GTCTC 3 cut(s) 23, 653, 1121
AlwI GGATC 3 cut(s) 401, 731, 736
AlwNI CAGNNNCTG 1 cut(s) 1148
AoxI GGCC 1 cut(s) 412
ApeKI GCWGC 5 cut(s) 192, 226, 342, 370, 1096
ApoI RAATTY 1 cut(s) 781
ArsI GACNNNNNNTTYG 2 cut(s) 158, 190
Asp700I GAANNNNTTC 1 cut(s) 783
AspLEI GCGC 4 cut(s) 59, 192, 391, 692
AspS9I GGNCC 1 cut(s) 945
AsuHPI GGTGA 4 cut(s) 854, 925, 1046, 1131
AvaII GGWCC 1 cut(s) 945
BaeGI GKGCMC 1 cut(s) 45
BaeI ACNNNNGTAYC 2 cut(s) 1060, 1093
BanI GGYRCC 3 cut(s) 40, 56, 689
BbsI GAAGAC 1 cut(s) 601
BbvI GCAGC 5 cut(s) 204, 213, 329, 382, 1108
BccI CCATC 3 cut(s) 47, 719, 913
BceAI ACGGC 2 cut(s) 25, 703
BciT130I CCWGG 3 cut(s) 20, 108, 416
BcoDI GTCTC 3 cut(s) 23, 653, 1121
BfaI CTAG 3 cut(s) 405, 794, 1156
BfmI CTRYAG 1 cut(s) 343
BfoI RGCGCY 2 cut(s) 60, 693
BfrI CTTAAG 1 cut(s) 1024
BglII AGATCT 1 cut(s) 838
BisI GCNGC 6 cut(s) 193, 227, 248, 343, 371, 1097
BlsI GCNGC 6 cut(s) 194, 228, 249, 344, 372, 1098
Bme1390I CCNGG 3 cut(s) 20, 108, 416
Bme18I GGWCC 1 cut(s) 945
BmgT120I GGNCC 1 cut(s) 945
BmiI GGNNCC 4 cut(s) 42, 58, 105, 691
BmrFI CCNGG 3 cut(s) 20, 108, 416
BmrI ACTGGG 2 cut(s) 489, 1158
BmuI ACTGGG 2 cut(s) 489, 1158
BpiI GAAGAC 1 cut(s) 601
Bpu10I CCTNAGC 1 cut(s) 1100
BpuEI CTTGAG 2 cut(s) 107, 241
BsaHI GRCGYC 3 cut(s) 12, 57, 690
BsaI GGTCTC 1 cut(s) 653
BsaJI CCNNGG 2 cut(s) 107, 477
BsaXI ACNNNNNCTCC 2 cut(s) 782, 812
Bsc4I CCNNNNNNNGG 4 cut(s) 222, 467, 699, 1148
Bse1I ACTGG 4 cut(s) 42, 472, 495, 1153
Bse3DI GCAATG 1 cut(s) 415
BseBI CCWGG 3 cut(s) 20, 108, 416
BseDI CCNNGG 2 cut(s) 107, 477
BseGI GGATG 3 cut(s) 81, 982, 1009
BseLI CCNNNNNNNGG 4 cut(s) 222, 467, 699, 1148
BseMI GCAATG 1 cut(s) 415
BseMII CTCAG 1 cut(s) 1114
BseNI ACTGG 4 cut(s) 42, 472, 495, 1153
BseSI GKGCMC 1 cut(s) 45
BseXI GCAGC 5 cut(s) 204, 213, 329, 382, 1108
BsgI GTGCAG 2 cut(s) 603, 741
Bsh1236I CGCG 1 cut(s) 391
BshFI GGCC 1 cut(s) 414
BshNI GGYRCC 3 cut(s) 40, 56, 689
BslI CCNNNNNNNGG 4 cut(s) 222, 467, 699, 1148
BsmAI GTCTC 3 cut(s) 23, 653, 1121
BsmBI CGTCTC 1 cut(s) 23
BsnI GGCC 1 cut(s) 414
Bso31I GGTCTC 1 cut(s) 653
Bsp1286I GDGCHC 1 cut(s) 45
Bsp143I GATC 7 cut(s) 393, 586, 652, 728, 736, 838, 967
BspACI CCGC 4 cut(s) 5, 247, 391, 670
BspANI GGCC 1 cut(s) 414
BspCNI CTCAG 1 cut(s) 1113
BspFNI CGCG 1 cut(s) 391
BspLI GGNNCC 4 cut(s) 42, 58, 105, 691
BspMAI CTGCAG 1 cut(s) 347
BspPI GGATC 3 cut(s) 401, 731, 736
BspT107I GGYRCC 3 cut(s) 40, 56, 689
BspTI CTTAAG 1 cut(s) 1024
BspTNI GGTCTC 1 cut(s) 653
BsrBI CCGCTC 1 cut(s) 670
BsrDI GCAATG 1 cut(s) 415
BsrI ACTGG 4 cut(s) 42, 472, 495, 1153
BssECI CCNNGG 2 cut(s) 107, 477
BssMI GATC 7 cut(s) 393, 586, 652, 728, 736, 838, 967
BssNI GRCGYC 3 cut(s) 12, 57, 690
BssT1I CCWWGG 1 cut(s) 477
Bst2UI CCWGG 3 cut(s) 20, 108, 416
Bst4CI ACNGT 3 cut(s) 96, 288, 575
BstACI GRCGYC 3 cut(s) 12, 57, 690
BstAFI CTTAAG 1 cut(s) 1024
BstAPI GCANNNNNTGC 1 cut(s) 40
BstC8I GCNNGC 1 cut(s) 1107
BstDEI CTNAG 1 cut(s) 1100
BstF5I GGATG 3 cut(s) 81, 982, 1009
BstFNI CGCG 1 cut(s) 391
BstH2I RGCGCY 2 cut(s) 60, 693
BstHHI GCGC 4 cut(s) 59, 192, 391, 692
BstKTI GATC 7 cut(s) 396, 589, 655, 731, 739, 841, 970
BstMAI GTCTC 3 cut(s) 23, 653, 1121
BstMBI GATC 7 cut(s) 393, 586, 652, 728, 736, 838, 967
BstMWI GCNNNNNNNGC 2 cut(s) 40, 1102
BstNI CCWGG 3 cut(s) 20, 108, 416
BstSCI CCNGG 3 cut(s) 18, 106, 414
BstSFI CTRYAG 1 cut(s) 343
BstSLI GKGCMC 1 cut(s) 45
BstUI CGCG 1 cut(s) 391
BstV1I GCAGC 5 cut(s) 204, 213, 329, 382, 1108
BstV2I GAAGAC 1 cut(s) 601
BstX2I RGATCY 2 cut(s) 736, 838
BstYI RGATCY 2 cut(s) 736, 838
BsuRI GGCC 1 cut(s) 414
BtsCI GGATG 3 cut(s) 81, 982, 1009
BtsIMutI CAGTG 1 cut(s) 614
Cac8I GCNNGC 1 cut(s) 1107
CaiI CAGNNNCTG 1 cut(s) 1148
CfoI GCGC 4 cut(s) 59, 192, 391, 692
Cfr13I GGNCC 1 cut(s) 945
CseI GACGC 1 cut(s) 40
Csp6I GTAC 3 cut(s) 153, 465, 991
CviAII CATG 4 cut(s) 99, 147, 397, 630
CviJI RGCY 9 cut(s) 195, 226, 373, 414, 703, 793, 1022, 1099, 1105
CviKI_1 RGCY 9 cut(s) 195, 226, 373, 414, 703, 793, 1022, 1099, 1105
CviQI GTAC 3 cut(s) 153, 465, 991
DdeI CTNAG 1 cut(s) 1100
DinI GGCGCC 2 cut(s) 58, 691
DpnI GATC 7 cut(s) 395, 588, 654, 730, 738, 840, 969
DpnII GATC 7 cut(s) 393, 586, 652, 728, 736, 838, 967
DraI TTTAAA 1 cut(s) 1056
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 477
Eco31I GGTCTC 1 cut(s) 653
Eco47I GGWCC 1 cut(s) 945
EcoRII CCWGG 3 cut(s) 18, 106, 414
EcoT14I CCWWGG 1 cut(s) 477
EgeI GGCGCC 2 cut(s) 58, 691
EheI GGCGCC 2 cut(s) 58, 691
ErhI CCWWGG 1 cut(s) 477
Esp3I CGTCTC 1 cut(s) 23
FaeI CATG 4 cut(s) 102, 150, 400, 633
FatI CATG 4 cut(s) 98, 146, 396, 629
FauI CCCGC 1 cut(s) 663
Fnu4HI GCNGC 6 cut(s) 193, 227, 248, 343, 371, 1097
FokI GGATG 3 cut(s) 68, 969, 1016
Fsp4HI GCNGC 6 cut(s) 193, 227, 248, 343, 371, 1097
FspBI CTAG 3 cut(s) 405, 794, 1156
GlaI GCGC 4 cut(s) 58, 191, 390, 691
GluI GCNGC 6 cut(s) 193, 227, 248, 343, 371, 1097
HaeII RGCGCY 2 cut(s) 60, 693
HaeIII GGCC 1 cut(s) 414
HgaI GACGC 1 cut(s) 40
HhaI GCGC 4 cut(s) 59, 192, 391, 692
Hin1I GRCGYC 3 cut(s) 12, 57, 690
Hin1II CATG 4 cut(s) 102, 150, 400, 633
Hin6I GCGC 4 cut(s) 57, 190, 389, 690
HinP1I GCGC 4 cut(s) 57, 190, 389, 690
HinfI GANTC 3 cut(s) 278, 457, 539
HphI GGTGA 4 cut(s) 854, 925, 1046, 1131
Hpy166II GTNNAC 4 cut(s) 153, 237, 850, 991
Hpy188I TCNGA 6 cut(s) 49, 258, 741, 818, 890, 1000
Hpy188III TCNNGA 4 cut(s) 500, 650, 788, 971
Hpy8I GTNNAC 4 cut(s) 153, 237, 850, 991
Hpy99I CGWCG 1 cut(s) 720
HpyAV CCTTC 3 cut(s) 342, 521, 638
HpyCH4III ACNGT 3 cut(s) 96, 288, 575
HpyCH4IV ACGT 3 cut(s) 708, 715, 993
HpyCH4V TGCA 6 cut(s) 141, 345, 570, 584, 722, 1109
HpyF10VI GCNNNNNNNGC 2 cut(s) 40, 1102
HpyF3I CTNAG 1 cut(s) 1100
HpySE526I ACGT 3 cut(s) 708, 715, 993
Hsp92I GRCGYC 3 cut(s) 12, 57, 690
Hsp92II CATG 4 cut(s) 102, 150, 400, 633
HspAI GCGC 4 cut(s) 57, 190, 389, 690
KasI GGCGCC 2 cut(s) 56, 689
Kzo9I GATC 7 cut(s) 393, 586, 652, 728, 736, 838, 967
LmnI GCTCC 1 cut(s) 790
Lsp1109I GCAGC 5 cut(s) 204, 213, 329, 382, 1108
MaeI CTAG 3 cut(s) 405, 794, 1156
MaeII ACGT 3 cut(s) 708, 715, 993
MaeIII GTNAC 3 cut(s) 533, 801, 1034
MalI GATC 7 cut(s) 395, 588, 654, 730, 738, 840, 969
MbiI CCGCTC 1 cut(s) 670
MboI GATC 7 cut(s) 393, 586, 652, 728, 736, 838, 967
MboII GAAGA 2 cut(s) 313, 601
MflI RGATCY 2 cut(s) 736, 838
MhlI GDGCHC 1 cut(s) 45
MluCI AATT 7 cut(s) 172, 356, 433, 472, 781, 883, 1043
Mly113I GGCGCC 2 cut(s) 57, 690
MnlI CCTC 8 cut(s) 26, 55, 216, 627, 655, 769, 994, 1024
MroXI GAANNNNTTC 1 cut(s) 783
MseI TTAA 8 cut(s) 158, 296, 365, 711, 1025, 1040, 1055, 1083
MspCI CTTAAG 1 cut(s) 1024
MspR9I CCNGG 3 cut(s) 20, 108, 416
MvaI CCWGG 3 cut(s) 20, 108, 416
MvnI CGCG 1 cut(s) 391
MwoI GCNNNNNNNGC 2 cut(s) 40, 1102
NarI GGCGCC 2 cut(s) 57, 690
NdeII GATC 7 cut(s) 393, 586, 652, 728, 736, 838, 967
NlaIII CATG 4 cut(s) 102, 150, 400, 633
NlaIV GGNNCC 4 cut(s) 42, 58, 105, 691
NmuCI GTSAC 1 cut(s) 1034
PcsI WCGNNNNNNNCGW 1 cut(s) 130
PdmI GAANNNNTTC 1 cut(s) 783
PfeI GAWTC 3 cut(s) 278, 457, 539
PflFI GACNNNGTC 1 cut(s) 11
PflMI CCANNNNNTGG 1 cut(s) 1148
PfoI TCCNGGA 1 cut(s) 18
PkrI GCNGC 6 cut(s) 194, 228, 249, 344, 372, 1098
PluTI GGCGCC 2 cut(s) 60, 693
PsiI TTATAA 1 cut(s) 431
Psp1406I AACGTT 1 cut(s) 708
Psp6I CCWGG 3 cut(s) 18, 106, 414
PspGI CCWGG 3 cut(s) 18, 106, 414
PspN4I GGNNCC 4 cut(s) 42, 58, 105, 691
PspPI GGNCC 1 cut(s) 945
PstI CTGCAG 1 cut(s) 347
PstNI CAGNNNCTG 1 cut(s) 1148
PsuI RGATCY 2 cut(s) 736, 838
PsyI GACNNNGTC 1 cut(s) 11
RsaI GTAC 3 cut(s) 154, 466, 992
RsaNI GTAC 3 cut(s) 153, 465, 991
SaqAI TTAA 8 cut(s) 158, 296, 365, 711, 1025, 1040, 1055, 1083
SatI GCNGC 6 cut(s) 193, 227, 248, 343, 371, 1097
Sau3AI GATC 7 cut(s) 393, 586, 652, 728, 736, 838, 967
Sau96I GGNCC 1 cut(s) 945
ScrFI CCNGG 3 cut(s) 20, 108, 416
SduI GDGCHC 1 cut(s) 45
SfcI CTRYAG 1 cut(s) 343
SfoI GGCGCC 2 cut(s) 58, 691
SinI GGWCC 1 cut(s) 945
SmlI CTYRAG 3 cut(s) 86, 220, 1024
SmoI CTYRAG 3 cut(s) 86, 220, 1024
Sse9I AATT 7 cut(s) 172, 356, 433, 472, 781, 883, 1043
SsiI CCGC 4 cut(s) 5, 247, 391, 670
SspDI GGCGCC 2 cut(s) 56, 689
SspI AATATT 1 cut(s) 319
SspMI CTAG 3 cut(s) 405, 794, 1156
StyD4I CCNGG 3 cut(s) 18, 106, 414
StyI CCWWGG 1 cut(s) 477
TaaI ACNGT 3 cut(s) 96, 288, 575
TaiI ACGT 3 cut(s) 711, 718, 996
TaqI TCGA 4 cut(s) 266, 589, 651, 765
TasI AATT 7 cut(s) 172, 356, 433, 472, 781, 883, 1043
TatI WGTACW 1 cut(s) 464
TauI GCSGC 1 cut(s) 250
TfiI GAWTC 3 cut(s) 278, 457, 539
Tru1I TTAA 8 cut(s) 158, 296, 365, 711, 1025, 1040, 1055, 1083
Tru9I TTAA 8 cut(s) 158, 296, 365, 711, 1025, 1040, 1055, 1083
TscAI CASTG 1 cut(s) 621
TseFI GTSAC 1 cut(s) 1034
TseI GCWGC 5 cut(s) 192, 226, 342, 370, 1096
Tsp45I GTSAC 1 cut(s) 1034
TspDTI ATGAA 4 cut(s) 612, 618, 864, 1006
TspRI CASTG 1 cut(s) 621
Tth111I GACNNNGTC 1 cut(s) 11
Van91I CCANNNNNTGG 1 cut(s) 1148
Vha464I CTTAAG 1 cut(s) 1024
VpaK11BI GGWCC 1 cut(s) 945
XapI RAATTY 1 cut(s) 781
XmnI GAANNNNTTC 1 cut(s) 783
XspI CTAG 3 cut(s) 405, 794, 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.