FvH4_4g09850

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000113
Physical Location & Seq
Forward (+)
12079324 .. 12080881
1558 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g09850.t3

Sequence Viewer

Length: 900 bp
ATGAGGAACAGAGCCAATCTCGGACCAAATTCGAGGCCAGCGCTCAAATTGCTATGGATGATCAGAAAACGCAAACAACCCTCCCTCTCTTTCCTCTGTTCCACAATCCCGGACGGCTGTGCCGCGGTTCTCACCGGCCACGAAGACGTCGTCGTCGAAATCCTCGCAAGACTGCCGGTCAAAACCCTAATGCGATTCCGGTGTGTCTGCACGACATGGCGTTCGCTTATCGGCTACACCCATTTCGTCAAGAAGCACATGAAATACGACGCCGAGAGAGGCGTAAACGACGCCGATATGCGGCTGCTGTTCTCCATGAAGCCGCCCAGCACCATGGGCTTGGTGGATTTGAAGGACGCTGAGCTGGATTCGAAGACATTCAGAGATGACGGCCGTGTTCCGGTCAGAGAGCTTGAGTTTCCGGTATGTCTTGATTTCGTTTCGGATATAGTGAATGTTGGTAGTTGCAATGGGATTATTTGTGTTCATTTTGACAAGGATTATGTGTTGTGGAACCCTTGTACTGGAGAGCACAACGTGTTGCCGAAACCGAGTGGTCTTTCTTGCTATCCAAAGTATTATGGATTCGGTTATGATGAAATTAATGATGATTACAAGGTAGTTTTGGGGTCACATAGTGAATATGATGTGTATGGTCCGATGGAACCAATGATTCAGGTGTTTTCGTTGAGGAGAGGTACATGGAACACTTATCCCGGCCCGAGGAACAGTAACAGGAGATGGACTTGCATGAGAGGGCAGGGGGGTTTTCTGAATGGAGTGCTGCATTGGTTGTGGCTTGAGGAGTCGTCCTGGGATACACCAAGCACGGAGATTATGCCTTTTAGTTTAGCTGAGGAGAAATTTCTGGAGGTGATGCCGATTCCCTGGGATGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

300

Amino Acids

34.32

Weight (kDa)

6.4

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 48 - 81 6.8e-09 F-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 152
AatII GACGTC 1 cut(s) 150
AccII CGCG 1 cut(s) 125
AciI CCGC 4 cut(s) 123, 125, 301, 323
AcoI YGGCCR 2 cut(s) 136, 391
AcsI RAATTY 2 cut(s) 28, 863
AcyI GRCGYC 3 cut(s) 147, 270, 291
AdeI CACNNNGTG 2 cut(s) 538, 638
AfaI GTAC 2 cut(s) 523, 700
AfeI AGCGCT 1 cut(s) 42
AfiI CCNNNNNNNGG 4 cut(s) 300, 400, 524, 723
AflIII ACRYGT 1 cut(s) 537
AgsI TTSAA 1 cut(s) 352
AhdI GACNNNNNGTC 1 cut(s) 176
AjnI CCWGG 2 cut(s) 812, 887
AluBI AGCT 3 cut(s) 364, 412, 854
AluI AGCT 3 cut(s) 364, 412, 854
Alw21I GWGCWC 1 cut(s) 534
Ama87I CYCGRG 1 cut(s) 721
Aor51HI AGCGCT 1 cut(s) 42
AoxI GGCC 4 cut(s) 35, 136, 391, 718
ApeKI GCWGC 2 cut(s) 304, 784
ApoI RAATTY 2 cut(s) 28, 863
ArsI GACNNNNNNTTYG 4 cut(s) 135, 167, 205, 237
AseI ATTAAT 1 cut(s) 603
Asp700I GAANNNNTTC 1 cut(s) 377
AspLEI GCGC 1 cut(s) 43
AspS9I GGNCC 3 cut(s) 23, 656, 719
AsuC2I CCSGG 2 cut(s) 110, 717
AsuHPI GGTGA 2 cut(s) 124, 886
AsuII TTCGAA 1 cut(s) 371
AvaI CYCGRG 1 cut(s) 721
AvaII GGWCC 2 cut(s) 23, 656
BbsI GAAGAC 2 cut(s) 150, 380
Bbv12I GWGCWC 1 cut(s) 534
BbvCI CCTCAGC 1 cut(s) 855
BbvI GCAGC 2 cut(s) 291, 771
BccI CCATC 2 cut(s) 655, 735
BceAI ACGGC 3 cut(s) 130, 378, 406
BciT130I CCWGG 2 cut(s) 814, 889
BciVI GTATCC 1 cut(s) 811
BclI TGATCA 1 cut(s) 60
BcnI CCSGG 2 cut(s) 110, 717
BfoI RGCGCY 1 cut(s) 44
BfuI GTATCC 1 cut(s) 811
BisI GCNGC 5 cut(s) 123, 302, 305, 323, 785
BlpI GCTNAGC 1 cut(s) 360
BlsI GCNGC 5 cut(s) 124, 303, 306, 324, 786
Bme1390I CCNGG 4 cut(s) 110, 717, 814, 889
Bme18I GGWCC 2 cut(s) 23, 656
BmeRI GACNNNNNGTC 1 cut(s) 176
BmeT110I CYCGRG 1 cut(s) 721
BmgT120I GGNCC 3 cut(s) 23, 656, 719
BmiI GGNNCC 2 cut(s) 515, 666
BmrFI CCNGG 4 cut(s) 110, 717, 814, 889
BmsI GCATC 1 cut(s) 867
BpiI GAAGAC 2 cut(s) 150, 380
BplI GAGNNNNNCTC 1 cut(s) 35
BpmI CTGGAG 2 cut(s) 546, 890
Bpu10I CCTNAGC 1 cut(s) 855
Bpu1102I GCTNAGC 1 cut(s) 360
Bpu14I TTCGAA 1 cut(s) 371
BpuEI CTTGAG 2 cut(s) 434, 821
BpuMI CCSGG 2 cut(s) 110, 717
BsaHI GRCGYC 3 cut(s) 147, 270, 291
BsaJI CCNNGG 6 cut(s) 123, 333, 722, 813, 887, 888
BsaWI WCCGGW 3 cut(s) 198, 400, 421
Bsc4I CCNNNNNNNGG 4 cut(s) 300, 400, 524, 723
Bse118I RCCGGY 2 cut(s) 134, 175
Bse1I ACTGG 1 cut(s) 529
Bse3DI GCAATG 1 cut(s) 475
BseBI CCWGG 2 cut(s) 814, 889
BseDI CCNNGG 6 cut(s) 123, 333, 722, 813, 887, 888
BseGI GGATG 2 cut(s) 63, 898
BseLI CCNNNNNNNGG 4 cut(s) 300, 400, 524, 723
BseMI GCAATG 1 cut(s) 475
BseMII CTCAG 2 cut(s) 351, 846
BseNI ACTGG 1 cut(s) 529
BseRI GAGGAG 3 cut(s) 706, 818, 872
BseX3I CGGCCG 1 cut(s) 391
BseXI GCAGC 2 cut(s) 291, 771
BseYI CCCAGC 1 cut(s) 326
BsgI GTGCAG 1 cut(s) 193
Bsh1236I CGCG 1 cut(s) 125
Bsh1285I CGRYCG 1 cut(s) 394
BshFI GGCC 4 cut(s) 37, 138, 393, 720
BsiEI CGRYCG 1 cut(s) 394
BsiHKAI GWGCWC 1 cut(s) 534
BsiHKCI CYCGRG 1 cut(s) 721
BsiSI CCGG 7 cut(s) 110, 135, 176, 199, 401, 422, 717
BslI CCNNNNNNNGG 4 cut(s) 300, 400, 524, 723
BsnI GGCC 4 cut(s) 37, 138, 393, 720
BsoBI CYCGRG 1 cut(s) 721
Bsp119I TTCGAA 1 cut(s) 371
Bsp1286I GDGCHC 1 cut(s) 534
Bsp143I GATC 1 cut(s) 60
Bsp1720I GCTNAGC 1 cut(s) 360
Bsp19I CCATGG 1 cut(s) 333
BspACI CCGC 4 cut(s) 123, 125, 301, 323
BspANI GGCC 4 cut(s) 37, 138, 393, 720
BspCNI CTCAG 2 cut(s) 352, 847
BspFNI CGCG 1 cut(s) 125
BspLI GGNNCC 2 cut(s) 515, 666
BspT104I TTCGAA 1 cut(s) 371
BsrDI GCAATG 1 cut(s) 475
BsrFI RCCGGY 2 cut(s) 134, 175
BsrI ACTGG 1 cut(s) 529
BssAI RCCGGY 2 cut(s) 134, 175
BssECI CCNNGG 6 cut(s) 123, 333, 722, 813, 887, 888
BssMI GATC 1 cut(s) 60
BssNI GRCGYC 3 cut(s) 147, 270, 291
BssT1I CCWWGG 1 cut(s) 333
Bst2UI CCWGG 2 cut(s) 814, 889
Bst4CI ACNGT 1 cut(s) 731
BstACI GRCGYC 3 cut(s) 147, 270, 291
BstBI TTCGAA 1 cut(s) 371
BstC8I GCNNGC 1 cut(s) 39
BstDEI CTNAG 2 cut(s) 360, 855
BstDSI CCRYGG 2 cut(s) 123, 333
BstF5I GGATG 2 cut(s) 63, 898
BstFNI CGCG 1 cut(s) 125
BstH2I RGCGCY 1 cut(s) 44
BstHHI GCGC 1 cut(s) 43
BstKTI GATC 1 cut(s) 63
BstMBI GATC 1 cut(s) 60
BstMCI CGRYCG 1 cut(s) 394
BstMWI GCNNNNNNNGC 2 cut(s) 49, 336
BstNI CCWGG 2 cut(s) 814, 889
BstSCI CCNGG 4 cut(s) 108, 715, 812, 887
BstUI CGCG 1 cut(s) 125
BstV1I GCAGC 2 cut(s) 291, 771
BstV2I GAAGAC 2 cut(s) 150, 380
BstXI CCANNNNNNTGG 2 cut(s) 334, 340
BstZI CGGCCG 1 cut(s) 391
BsuI GTATCC 1 cut(s) 811
BsuRI GGCC 4 cut(s) 37, 138, 393, 720
BtgI CCRYGG 2 cut(s) 123, 333
BtsCI GGATG 2 cut(s) 63, 898
Cac8I GCNNGC 1 cut(s) 39
CfoI GCGC 1 cut(s) 43
Cfr10I RCCGGY 2 cut(s) 134, 175
Cfr13I GGNCC 3 cut(s) 23, 656, 719
Cfr42I CCGCGG 1 cut(s) 126
CseI GACGC 3 cut(s) 278, 299, 365
Csp6I GTAC 2 cut(s) 522, 699
CviAII CATG 6 cut(s) 216, 259, 316, 334, 702, 751
CviQI GTAC 2 cut(s) 522, 699
DdeI CTNAG 2 cut(s) 360, 855
DpnI GATC 1 cut(s) 62
DpnII GATC 1 cut(s) 60
DraIII CACNNNGTG 2 cut(s) 538, 638
DrdI GACNNNNNNGTC 1 cut(s) 152
DriI GACNNNNNGTC 1 cut(s) 176
DseDI GACNNNNNNGTC 1 cut(s) 152
EaeI YGGCCR 2 cut(s) 136, 391
EagI CGGCCG 1 cut(s) 391
Eam1105I GACNNNNNGTC 1 cut(s) 176
EclXI CGGCCG 1 cut(s) 391
Eco130I CCWWGG 1 cut(s) 333
Eco47I GGWCC 2 cut(s) 23, 656
Eco47III AGCGCT 1 cut(s) 42
Eco52I CGGCCG 1 cut(s) 391
Eco88I CYCGRG 1 cut(s) 721
EcoRII CCWGG 2 cut(s) 812, 887
EcoT14I CCWWGG 1 cut(s) 333
ErhI CCWWGG 1 cut(s) 333
FaeI CATG 6 cut(s) 219, 262, 319, 337, 705, 754
FatI CATG 6 cut(s) 215, 258, 315, 333, 701, 750
FbaI TGATCA 1 cut(s) 60
Fnu4HI GCNGC 5 cut(s) 123, 302, 305, 323, 785
FokI GGATG 1 cut(s) 70
Fsp4HI GCNGC 5 cut(s) 123, 302, 305, 323, 785
GlaI GCGC 1 cut(s) 42
GluI GCNGC 5 cut(s) 123, 302, 305, 323, 785
GsaI CCCAGC 1 cut(s) 330
GsuI CTGGAG 2 cut(s) 546, 890
HaeII RGCGCY 1 cut(s) 44
HaeIII GGCC 4 cut(s) 37, 138, 393, 720
HapII CCGG 7 cut(s) 110, 135, 176, 199, 401, 422, 717
HgaI GACGC 3 cut(s) 278, 299, 365
HhaI GCGC 1 cut(s) 43
Hin1I GRCGYC 3 cut(s) 147, 270, 291
Hin1II CATG 6 cut(s) 219, 262, 319, 337, 705, 754
Hin6I GCGC 1 cut(s) 41
HinP1I GCGC 1 cut(s) 41
HinfI GANTC 6 cut(s) 195, 368, 585, 673, 806, 883
HpaII CCGG 7 cut(s) 110, 135, 176, 199, 401, 422, 717
HphI GGTGA 2 cut(s) 124, 886
Hpy166II GTNNAC 1 cut(s) 286
Hpy188I TCNGA 7 cut(s) 23, 65, 383, 407, 445, 660, 774
Hpy188III TCNNGA 3 cut(s) 250, 431, 869
Hpy8I GTNNAC 1 cut(s) 286
Hpy99I CGWCG 5 cut(s) 152, 155, 158, 272, 293
HpyAV CCTTC 1 cut(s) 346
HpyCH4III ACNGT 1 cut(s) 731
HpyCH4IV ACGT 2 cut(s) 147, 537
HpyCH4V TGCA 4 cut(s) 210, 468, 750, 787
HpyF10VI GCNNNNNNNGC 2 cut(s) 49, 336
HpyF3I CTNAG 2 cut(s) 360, 855
HpySE526I ACGT 2 cut(s) 147, 537
Hsp92I GRCGYC 3 cut(s) 147, 270, 291
Hsp92II CATG 6 cut(s) 219, 262, 319, 337, 705, 754
HspAI GCGC 1 cut(s) 41
Ksp22I TGATCA 1 cut(s) 60
KspI CCGCGG 1 cut(s) 126
Kzo9I GATC 1 cut(s) 60
Lsp1109I GCAGC 2 cut(s) 291, 771
LweI GCATC 1 cut(s) 867
MaeII ACGT 2 cut(s) 147, 537
MaeIII GTNAC 2 cut(s) 630, 731
MalI GATC 1 cut(s) 62
MboI GATC 1 cut(s) 60
MboII GAAGA 2 cut(s) 155, 385
MhlI GDGCHC 1 cut(s) 534
MluCI AATT 4 cut(s) 28, 47, 600, 863
MlyI GAGTC 1 cut(s) 815
MroXI GAANNNNTTC 1 cut(s) 377
MseI TTAA 1 cut(s) 603
MspA1I CMGCKG 1 cut(s) 125
MspI CCGG 7 cut(s) 110, 135, 176, 199, 401, 422, 717
MspR9I CCNGG 4 cut(s) 110, 717, 814, 889
MvaI CCWGG 2 cut(s) 814, 889
MvnI CGCG 1 cut(s) 125
MwoI GCNNNNNNNGC 2 cut(s) 49, 336
NciI CCSGG 2 cut(s) 110, 717
NcoI CCATGG 1 cut(s) 333
NdeII GATC 1 cut(s) 60
NlaIII CATG 6 cut(s) 219, 262, 319, 337, 705, 754
NlaIV GGNNCC 2 cut(s) 515, 666
NmeAIII GCCGAG 1 cut(s) 298
NmuCI GTSAC 1 cut(s) 630
NspV TTCGAA 1 cut(s) 371
PasI CCCWGGG 1 cut(s) 888
PcsI WCGNNNNNNNCGW 2 cut(s) 147, 153
PdmI GAANNNNTTC 1 cut(s) 377
PfeI GAWTC 5 cut(s) 195, 368, 585, 673, 883
PflFI GACNNNGTC 1 cut(s) 149
PfoI TCCNGGA 1 cut(s) 108
PkrI GCNGC 5 cut(s) 124, 303, 306, 324, 786
PleI GAGTC 1 cut(s) 814
PpsI GAGTC 1 cut(s) 814
PshBI ATTAAT 1 cut(s) 603
Psp6I CCWGG 2 cut(s) 812, 887
PspFI CCCAGC 1 cut(s) 326
PspGI CCWGG 2 cut(s) 812, 887
PspN4I GGNNCC 2 cut(s) 515, 666
PspPI GGNCC 3 cut(s) 23, 656, 719
PsyI GACNNNGTC 1 cut(s) 149
RsaI GTAC 2 cut(s) 523, 700
RsaNI GTAC 2 cut(s) 522, 699
SacII CCGCGG 1 cut(s) 126
SaqAI TTAA 1 cut(s) 603
SatI GCNGC 5 cut(s) 123, 302, 305, 323, 785
Sau3AI GATC 1 cut(s) 60
Sau96I GGNCC 3 cut(s) 23, 656, 719
SchI GAGTC 1 cut(s) 815
ScrFI CCNGG 4 cut(s) 110, 717, 814, 889
SduI GDGCHC 1 cut(s) 534
SetI ASST 9 cut(s) 150, 366, 414, 540, 621, 681, 700, 856, 876
SfaNI GCATC 1 cut(s) 867
Sfr303I CCGCGG 1 cut(s) 126
SfuI TTCGAA 1 cut(s) 371
SgrBI CCGCGG 1 cut(s) 126
SinI GGWCC 2 cut(s) 23, 656
SmlI CTYRAG 2 cut(s) 413, 800
SmoI CTYRAG 2 cut(s) 413, 800
Sse9I AATT 4 cut(s) 28, 47, 600, 863
SsiI CCGC 4 cut(s) 123, 125, 301, 323
StyD4I CCNGG 4 cut(s) 108, 715, 812, 887
StyI CCWWGG 1 cut(s) 333
TaaI ACNGT 1 cut(s) 731
TaiI ACGT 2 cut(s) 150, 540
TaqI TCGA 3 cut(s) 32, 156, 371
TasI AATT 4 cut(s) 28, 47, 600, 863
TatI WGTACW 1 cut(s) 521
TauI GCSGC 3 cut(s) 125, 304, 325
TfiI GAWTC 5 cut(s) 195, 368, 585, 673, 883
Tru1I TTAA 1 cut(s) 603
Tru9I TTAA 1 cut(s) 603
TseFI GTSAC 1 cut(s) 630
TseI GCWGC 2 cut(s) 304, 784
Tsp45I GTSAC 1 cut(s) 630
TspDTI ATGAA 4 cut(s) 275, 332, 476, 612
TspGWI ACGGA 1 cut(s) 845
Tth111I GACNNNGTC 1 cut(s) 149
VpaK11BI GGWCC 2 cut(s) 23, 656
VspI ATTAAT 1 cut(s) 603
XapI RAATTY 2 cut(s) 28, 863
XcmI CCANNNNNNNNNTGG 1 cut(s) 340
XmnI GAANNNNTTC 1 cut(s) 377
ZraI GACGTC 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.