Rmu_sc0001027.1_g000028

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001027.1
OG0000113
Physical Location & Seq
Forward (+)
123109 .. 124747
1639 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001027.1_g000028.1.cds

Sequence Viewer

Length: 1230 bp
atgggggacgtcgatgtcgtgcgtaagcgagctcataccaacttcggcgactatgaggaagatgtgattgtggagatcctcgcaaggctaccggtcaaatccttgattcgattccggtgcgtctgcaagtcgtggcgtgctttgatctccgattcctattttgtaaagaaacacctcagctacggagagagaggcattaccgagagcactcacaggctcatcattttcatgttggatgatgtctcgccgttggaaatcctagccttggaaaatacgaaggatgatgatgatggtcagtttacagtcactcagctggattgtccggtaacaaaaactatcacttattcccgtcatagaattcttgttggttcttgcaatggcttggtatgcgtagaacttgacttgggggctattatgttatggaacccttgcactagagactccaaggttctaccaaaacctccgagagttataaactccaagtttagctactgcttttatggactcgggcatgattctgctagtgacgactacaaggtgatacgggggttcactgattttgctaagaaaatcatgattcacatcttttcactgaaaacaggttcatggaggactgtcgaagacattgattatgttggatttataatggggaaggggttgttcttaaatggagctctgcattggttatattgtctacctgaagggggctcaagaattttgtcttttgatttaggggcggagaaatttcagaagacgattccattaccctatgatgactggtttcgtgatcccttgattcataaaaattgtctctgtgtacttacttgcccaactgggaccaacaatttcaacatatggatgatgaaagaatatggggtcaaggaatcatggactgaagtcttacaattttctttgtttgacgagaagatttatgcagggtattttgatgataatacaaaatatttcaggcctgtgtgcatgttagagaatggtgtagttttgattgacgagatgggtatgtgtgaagacctcttggtattatctaatctaaaggagaagacattcaagcatgttgttgaggtcgcgacgagcttggacattagaacggtcatttaccgagagacattagtttcgccagatgtccacacatacaaaaccaacaattttagccatgtacgtggcagactccaggttccagcattatgtccagtgactaacacactagactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

409

Amino Acids

46.84

Weight (kDa)

6.03

Isoelectric Point (pI)

28.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 473, 644
AasI GACNNNNNNGTC 1 cut(s) 14
AatII GACGTC 1 cut(s) 12
AccI GTMKAC 1 cut(s) 694
AccII CGCG 1 cut(s) 1085
AciI CCGC 1 cut(s) 737
AclWI GGATC 2 cut(s) 70, 782
AcsI RAATTY 3 cut(s) 357, 714, 743
AcuI CTGAAG 2 cut(s) 720, 915
AcyI GRCGYC 1 cut(s) 9
AfaI GTAC 2 cut(s) 819, 1176
AfiI CCNNNNNNNGG 2 cut(s) 265, 704
AgeI ACCGGT 1 cut(s) 91
AgsI TTSAA 2 cut(s) 850, 1066
AjnI CCWGG 1 cut(s) 1188
AluBI AGCT 6 cut(s) 32, 180, 313, 489, 674, 1092
AluI AGCT 6 cut(s) 32, 180, 313, 489, 674, 1092
Alw21I GWGCWC 3 cut(s) 34, 209, 676
Alw26I GTCTC 4 cut(s) 247, 432, 815, 1115
AlwI GGATC 2 cut(s) 70, 782
Ama87I CYCGRG 1 cut(s) 506
AoxI GGCC 1 cut(s) 968
ApoI RAATTY 3 cut(s) 357, 714, 743
ArsI GACNNNNNNTTYG 2 cut(s) 1114, 1146
AsiGI ACCGGT 1 cut(s) 91
Asp700I GAANNNNTTC 1 cut(s) 1061
AspS9I GGNCC 1 cut(s) 837
AsuHPI GGTGA 1 cut(s) 550
AvaI CYCGRG 1 cut(s) 506
AvaII GGWCC 1 cut(s) 837
BaeI ACNNNNGTAYC 2 cut(s) 533, 566
BanII GRGCYC 3 cut(s) 34, 676, 710
BbsI GAAGAC 4 cut(s) 627, 758, 1032, 1064
Bbv12I GWGCWC 3 cut(s) 34, 209, 676
BbvCI CCTCAGC 1 cut(s) 176
BccI CCATC 2 cut(s) 284, 1006
BceAI ACGGC 1 cut(s) 232
BcgI CGANNNNNNTGC 2 cut(s) 99, 133
BciT130I CCWGG 1 cut(s) 1190
BcoDI GTCTC 4 cut(s) 247, 432, 815, 1115
BfaI CTAG 4 cut(s) 260, 435, 522, 1223
Bme1390I CCNGG 1 cut(s) 1190
Bme18I GGWCC 1 cut(s) 837
BmeT110I CYCGRG 1 cut(s) 506
BmgT120I GGNCC 1 cut(s) 837
BmiI GGNNCC 3 cut(s) 425, 838, 1194
BmrFI CCNGG 1 cut(s) 1190
BmrI ACTGGG 1 cut(s) 843
BmuI ACTGGG 1 cut(s) 843
BoxI GACNNNNGTC 1 cut(s) 896
BpiI GAAGAC 4 cut(s) 627, 758, 1032, 1064
BpmI CTGGAG 1 cut(s) 1172
Bpu10I CCTNAGC 1 cut(s) 176
BpuEI CTTGAG 1 cut(s) 694
BsaAI YACGTR 1 cut(s) 1178
BsaBI GATNNNNATC 1 cut(s) 581
BsaHI GRCGYC 1 cut(s) 9
BsaJI CCNNGG 2 cut(s) 264, 444
BsaWI WCCGGW 3 cut(s) 91, 114, 322
Bsc4I CCNNNNNNNGG 2 cut(s) 265, 704
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 3 cut(s) 782, 838, 1208
Bse3DI GCAATG 1 cut(s) 382
Bse8I GATNNNNATC 1 cut(s) 581
BseBI CCWGG 1 cut(s) 1190
BseDI CCNNGG 2 cut(s) 264, 444
BseGI GGATG 3 cut(s) 241, 286, 864
BseJI GATNNNNATC 1 cut(s) 581
BseLI CCNNNNNNNGG 2 cut(s) 265, 704
BseMI GCAATG 1 cut(s) 382
BseMII CTCAG 2 cut(s) 190, 323
BseNI ACTGG 3 cut(s) 782, 838, 1208
Bsh1236I CGCG 1 cut(s) 1085
BshFI GGCC 1 cut(s) 970
BshTI ACCGGT 1 cut(s) 91
BsiHKAI GWGCWC 3 cut(s) 34, 209, 676
BsiHKCI CYCGRG 1 cut(s) 506
BsiSI CCGG 3 cut(s) 92, 115, 323
BslFI GGGAC 2 cut(s) 20, 850
BslI CCNNNNNNNGG 2 cut(s) 265, 704
BsmAI GTCTC 4 cut(s) 247, 432, 815, 1115
BsmFI GGGAC 2 cut(s) 20, 850
BsnI GGCC 1 cut(s) 970
BsoBI CYCGRG 1 cut(s) 506
Bsp1286I GDGCHC 4 cut(s) 34, 209, 676, 710
Bsp143I GATC 3 cut(s) 75, 144, 787
Bsp68I TCGCGA 1 cut(s) 1085
BspACI CCGC 1 cut(s) 737
BspANI GGCC 1 cut(s) 970
BspCNI CTCAG 2 cut(s) 189, 322
BspFNI CGCG 1 cut(s) 1085
BspHI TCATGA 1 cut(s) 573
BspLI GGNNCC 3 cut(s) 425, 838, 1194
BspPI GGATC 2 cut(s) 70, 782
BsrDI GCAATG 1 cut(s) 382
BsrFI RCCGGY 1 cut(s) 91
BsrI ACTGG 3 cut(s) 782, 838, 1208
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 2 cut(s) 264, 444
BssMI GATC 3 cut(s) 75, 144, 787
BssNI GRCGYC 1 cut(s) 9
BssT1I CCWWGG 2 cut(s) 264, 444
Bst2UI CCWGG 1 cut(s) 1190
Bst4CI ACNGT 3 cut(s) 304, 616, 1108
BstACI GRCGYC 1 cut(s) 9
BstBAI YACGTR 1 cut(s) 1178
BstC8I GCNNGC 2 cut(s) 30, 138
BstDEI CTNAG 3 cut(s) 176, 309, 564
BstF5I GGATG 3 cut(s) 241, 286, 864
BstFNI CGCG 1 cut(s) 1085
BstKTI GATC 3 cut(s) 78, 147, 790
BstMAI GTCTC 4 cut(s) 247, 432, 815, 1115
BstMBI GATC 3 cut(s) 75, 144, 787
BstMWI GCNNNNNNNGC 1 cut(s) 387
BstNI CCWGG 1 cut(s) 1190
BstNSI RCATGY 2 cut(s) 982, 1073
BstPAI GACNNNNGTC 1 cut(s) 896
BstSCI CCNGG 1 cut(s) 1188
BstUI CGCG 1 cut(s) 1085
BstV2I GAAGAC 4 cut(s) 627, 758, 1032, 1064
BstX2I RGATCY 1 cut(s) 75
BstXI CCANNNNNNTGG 1 cut(s) 1178
BstYI RGATCY 1 cut(s) 75
BsuRI GGCC 1 cut(s) 970
BtsCI GGATG 3 cut(s) 241, 286, 864
BtsIMutI CAGTG 3 cut(s) 552, 590, 1215
BtuMI TCGCGA 1 cut(s) 1085
Cac8I GCNNGC 2 cut(s) 30, 138
CciI TCATGA 1 cut(s) 573
Cfr10I RCCGGY 1 cut(s) 91
Cfr13I GGNCC 1 cut(s) 837
CseI GACGC 1 cut(s) 109
Csp6I GTAC 2 cut(s) 818, 1175
CspAI ACCGGT 1 cut(s) 91
CviAII CATG 8 cut(s) 229, 512, 574, 606, 888, 979, 1070, 1172
CviQI GTAC 2 cut(s) 818, 1175
DdeI CTNAG 3 cut(s) 176, 309, 564
DpnI GATC 3 cut(s) 77, 146, 789
DpnII GATC 3 cut(s) 75, 144, 787
DrdI GACNNNNNNGTC 1 cut(s) 14
DseDI GACNNNNNNGTC 1 cut(s) 14
EciI GGCGGA 1 cut(s) 752
Ecl136II GAGCTC 2 cut(s) 32, 674
Eco130I CCWWGG 2 cut(s) 264, 444
Eco147I AGGCCT 1 cut(s) 970
Eco24I GRGCYC 3 cut(s) 34, 676, 710
Eco47I GGWCC 1 cut(s) 837
Eco53kI GAGCTC 2 cut(s) 32, 674
Eco57I CTGAAG 2 cut(s) 720, 915
Eco88I CYCGRG 1 cut(s) 506
EcoICRI GAGCTC 2 cut(s) 32, 674
EcoRI GAATTC 1 cut(s) 357
EcoRII CCWGG 1 cut(s) 1188
EcoT14I CCWWGG 2 cut(s) 264, 444
EcoT38I GRGCYC 3 cut(s) 34, 676, 710
ErhI CCWWGG 2 cut(s) 264, 444
FaeI CATG 8 cut(s) 232, 515, 577, 609, 891, 982, 1073, 1175
FaqI GGGAC 2 cut(s) 20, 850
FatI CATG 8 cut(s) 228, 511, 573, 605, 887, 978, 1069, 1171
FauNDI CATATG 1 cut(s) 854
FblI GTMKAC 1 cut(s) 694
FokI GGATG 3 cut(s) 248, 293, 871
FriOI GRGCYC 3 cut(s) 34, 676, 710
FspBI CTAG 4 cut(s) 260, 435, 522, 1223
GsuI CTGGAG 1 cut(s) 1172
HaeIII GGCC 1 cut(s) 970
HapII CCGG 3 cut(s) 92, 115, 323
HgaI GACGC 1 cut(s) 109
Hin1I GRCGYC 1 cut(s) 9
Hin1II CATG 8 cut(s) 232, 515, 577, 609, 891, 982, 1073, 1175
HpaII CCGG 3 cut(s) 92, 115, 323
HphI GGTGA 1 cut(s) 550
Hpy166II GTNNAC 5 cut(s) 300, 552, 695, 818, 1144
Hpy188I TCNGA 3 cut(s) 151, 465, 750
Hpy188III TCNNGA 4 cut(s) 574, 711, 785, 1084
Hpy8I GTNNAC 5 cut(s) 300, 552, 695, 818, 1144
Hpy99I CGWCG 2 cut(s) 14, 1090
HpyAV CCTTC 3 cut(s) 271, 646, 695
HpyCH4III ACNGT 3 cut(s) 304, 616, 1108
HpyCH4IV ACGT 2 cut(s) 9, 1177
HpyCH4V TGCA 6 cut(s) 126, 375, 432, 679, 935, 978
HpyF10VI GCNNNNNNNGC 1 cut(s) 387
HpyF3I CTNAG 3 cut(s) 176, 309, 564
HpySE526I ACGT 2 cut(s) 9, 1177
Hsp92I GRCGYC 1 cut(s) 9
Hsp92II CATG 8 cut(s) 232, 515, 577, 609, 891, 982, 1073, 1175
Kzo9I GATC 3 cut(s) 75, 144, 787
LmnI GCTCC 1 cut(s) 671
MaeI CTAG 4 cut(s) 260, 435, 522, 1223
MaeII ACGT 2 cut(s) 9, 1177
MaeIII GTNAC 4 cut(s) 304, 325, 524, 1210
MalI GATC 3 cut(s) 77, 146, 789
MboI GATC 3 cut(s) 75, 144, 787
MboII GAAGA 6 cut(s) 71, 632, 763, 937, 1037, 1069
MflI RGATCY 1 cut(s) 75
MhlI GDGCHC 4 cut(s) 34, 209, 676, 710
MluCI AATT 7 cut(s) 357, 714, 743, 805, 844, 905, 1162
MlyI GAGTC 3 cut(s) 434, 498, 1179
MmeI TCCRAC 3 cut(s) 213, 231, 616
MnlI CCTC 8 cut(s) 49, 89, 185, 185, 471, 603, 1040, 1072
MroXI GAANNNNTTC 1 cut(s) 1061
MseI TTAA 1 cut(s) 665
MslI CAYNNNNRTG 3 cut(s) 227, 857, 1176
MspA1I CMGCKG 1 cut(s) 313
MspI CCGG 3 cut(s) 92, 115, 323
MspR9I CCNGG 1 cut(s) 1190
MvaI CCWGG 1 cut(s) 1190
MvnI CGCG 1 cut(s) 1085
MwoI GCNNNNNNNGC 1 cut(s) 387
NdeI CATATG 1 cut(s) 854
NdeII GATC 3 cut(s) 75, 144, 787
NlaIII CATG 8 cut(s) 232, 515, 577, 609, 891, 982, 1073, 1175
NlaIV GGNNCC 3 cut(s) 425, 838, 1194
NmuCI GTSAC 3 cut(s) 304, 524, 1210
NruI TCGCGA 1 cut(s) 1085
NspI RCATGY 2 cut(s) 982, 1073
PagI TCATGA 1 cut(s) 573
PceI AGGCCT 1 cut(s) 970
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PdmI GAANNNNTTC 1 cut(s) 1061
PfeI GAWTC 8 cut(s) 106, 111, 152, 515, 577, 757, 796, 884
PinAI ACCGGT 1 cut(s) 91
PleI GAGTC 3 cut(s) 434, 498, 1179
PpsI GAGTC 3 cut(s) 434, 498, 1179
Ppu21I YACGTR 1 cut(s) 1178
PshAI GACNNNNGTC 1 cut(s) 896
PsiI TTATAA 2 cut(s) 473, 644
Psp124BI GAGCTC 2 cut(s) 34, 676
Psp6I CCWGG 1 cut(s) 1188
PspGI CCWGG 1 cut(s) 1188
PspN4I GGNNCC 3 cut(s) 425, 838, 1194
PspPI GGNCC 1 cut(s) 837
PsuI RGATCY 1 cut(s) 75
PvuII CAGCTG 1 cut(s) 313
RruI TCGCGA 1 cut(s) 1085
RsaI GTAC 2 cut(s) 819, 1176
RsaNI GTAC 2 cut(s) 818, 1175
RseI CAYNNNNRTG 3 cut(s) 227, 857, 1176
SacI GAGCTC 2 cut(s) 34, 676
SaqAI TTAA 1 cut(s) 665
Sau3AI GATC 3 cut(s) 75, 144, 787
Sau96I GGNCC 1 cut(s) 837
SchI GAGTC 3 cut(s) 434, 498, 1179
ScrFI CCNGG 1 cut(s) 1190
SduI GDGCHC 4 cut(s) 34, 209, 676, 710
SinI GGWCC 1 cut(s) 837
SmiMI CAYNNNNRTG 3 cut(s) 227, 857, 1176
SmlI CTYRAG 1 cut(s) 709
SmoI CTYRAG 1 cut(s) 709
Sse9I AATT 7 cut(s) 357, 714, 743, 805, 844, 905, 1162
SseBI AGGCCT 1 cut(s) 970
SsiI CCGC 1 cut(s) 737
SspI AATATT 1 cut(s) 962
SspMI CTAG 4 cut(s) 260, 435, 522, 1223
SstI GAGCTC 2 cut(s) 34, 676
StuI AGGCCT 1 cut(s) 970
StyD4I CCNGG 1 cut(s) 1188
StyI CCWWGG 2 cut(s) 264, 444
TaaI ACNGT 3 cut(s) 304, 616, 1108
TaiI ACGT 2 cut(s) 12, 1180
TaqI TCGA 3 cut(s) 12, 109, 618
TasI AATT 7 cut(s) 357, 714, 743, 805, 844, 905, 1162
TatI WGTACW 1 cut(s) 817
TfiI GAWTC 8 cut(s) 106, 111, 152, 515, 577, 757, 796, 884
Tru1I TTAA 1 cut(s) 665
Tru9I TTAA 1 cut(s) 665
TscAI CASTG 3 cut(s) 559, 597, 1215
TseFI GTSAC 3 cut(s) 304, 524, 1210
Tsp45I GTSAC 3 cut(s) 304, 524, 1210
TspDTI ATGAA 4 cut(s) 217, 594, 788, 878
TspGWI ACGGA 1 cut(s) 198
TspRI CASTG 3 cut(s) 559, 597, 1215
VpaK11BI GGWCC 1 cut(s) 837
XapI RAATTY 3 cut(s) 357, 714, 743
XceI RCATGY 2 cut(s) 982, 1073
XmiI GTMKAC 1 cut(s) 694
XmnI GAANNNNTTC 1 cut(s) 1061
XspI CTAG 4 cut(s) 260, 435, 522, 1223
ZraI GACGTC 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.