Rh6CG214300

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000113
Physical Location & Seq
Reverse (-)
35611553 .. 35613552
2000 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG214300.1

Sequence Viewer

Length: 1326 bp
ATGCACAACTCTCCCTCTACCACCATCCCAAACTCACAGATCATAATGAAAATGGAAACAAGCAGCAGCAGCAGCTCATTTCCCATTACTAGCAAAGATCTTCCTTGCGATATCATAGAGGAAATTCTGCTGCAGCTGCCGGTCAAGTCGCTGCTCCGTTTCAAATGCGTGAGCAAATCATGGCTTAATCTCATCTCCGACCACAAATTCATCAAGTCACACCTTCACCACTCCACCAAACAACACCCTCACCACGATGATGATGACGGTGATCGAATATCAAACGCACATCTCATGCTCTCCTCAACAACCCTCATTCACTCCCTCCATCTACAGCTACCCAATACTCGTACCAAACAAGAAGAAGAAGCGCCAGCTGCTGCTGCTGCAACTGATGCAGATGATGCAGTAGTACTCGAGTCCATGGTGGAGTACCCGGTGGCGTCGACGGTGAGGCGGCCAGCTGTCAAAGACATCAAGATCGTCGGTTCCTGCAACGGCTTGCTATGCTTGGTGCTCGACTCCCAACACATGATCATATACAACCCCTCCACCAGGCACGTTCAAGAAGTCCCCAGCCCGGAGGAAACTGTAGTCGGTAGAGACTACTTTTACGGTTTCGGTTATGATTGTCGCAACGACGACTGTAAAATAGTGAGGGCCACTTCTTCAAGTAGGGATGGAAATTTCGTCACCCAACTTGACATCTTTACTTTGAAGACCAACTCTTGGCGAACAAAAACCAAAACCCTACCCTTTTATTTCATGTCCAGCGTGGTGGGTACCCTTCTTAATGGGGCTCTCCACTGGGCAGTCCGTCGAGGAATCAACATCAGTCCTTCTGACGGCGATGACCATGACCCGAGGCCTTTCGGGATCGTCTCCTTTGATCTGACGGAGGAGACTTACAAAGAAGTACCCCTGCCGTGTGACGGTGACAAGCATTTCTCTTTCTATGGATTGGGGGTTTTAGGAGGGTGTCTGAGTATGCTCCACAGCCCCCACGGGTCTGATTATCAAGTGTGGGTTATGAAGGAATATGGAGTCAAGGCGTCTTGGAGCGTATTCACAACCATCCCACAGAAGATGGAGGATTCTAAGGAGTACATGGGACTGATGTCGCTTTTGTGCGTTTTGAAGAACGGCGAAATTCTAATGATGTTGCACAACCACAAAAAGGTTGTGATATACAATCCCGGACAAAGGAAATTTCGAACCATATTCAATGGGGAAATAGGCTCTTCCCAAGTGGCCTTATACCTCGAGACTCTAGTTTCAACAAAAATATATGCACCATCCTCATCACCATGCATCCTAGCTACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

441

Amino Acids

49.26

Weight (kDa)

6.36

Isoelectric Point (pI)

53.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 33 - 71 1.3e-09 F-box domain
FBA_1 PF07734 156 - 425 2e-29 F-box associated beta propeller domain
FBA_3 PF08268 158 - 415 2.7e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 782
AccB1I GGYRCC 1 cut(s) 782
AccB7I CCANNNNNTGG 1 cut(s) 729
AccI GTMKAC 1 cut(s) 446
AciI CCGC 1 cut(s) 457
AclWI GGATC 1 cut(s) 884
AcoI YGGCCR 1 cut(s) 458
AcsI RAATTY 5 cut(s) 123, 206, 685, 1149, 1208
AcyI GRCGYC 2 cut(s) 443, 1052
AfaI GTAC 6 cut(s) 352, 414, 434, 784, 918, 1106
AfiI CCNNNNNNNGG 7 cut(s) 555, 580, 729, 845, 932, 1177, 1203
AgsI TTSAA 7 cut(s) 163, 566, 672, 718, 1138, 1225, 1278
AjnI CCWGG 1 cut(s) 554
AluBI AGCT 6 cut(s) 75, 136, 337, 377, 464, 1319
AluI AGCT 6 cut(s) 75, 136, 337, 377, 464, 1319
Alw21I GWGCWC 1 cut(s) 519
Alw26I GTCTC 4 cut(s) 597, 886, 896, 1259
AlwI GGATC 1 cut(s) 884
AlwNI CAGNNNCTG 1 cut(s) 380
Ama87I CYCGRG 3 cut(s) 416, 862, 1262
AoxI GGCC 4 cut(s) 458, 660, 866, 1251
ApoI RAATTY 5 cut(s) 123, 206, 685, 1149, 1208
Asp718I GGTACC 1 cut(s) 782
AspLEI GCGC 1 cut(s) 373
AspS9I GGNCC 1 cut(s) 660
AsuC2I CCSGG 3 cut(s) 437, 581, 1197
AsuHPI GGTGA 7 cut(s) 218, 242, 281, 463, 685, 947, 1296
AsuII TTCGAA 1 cut(s) 1213
AvaI CYCGRG 3 cut(s) 416, 862, 1262
BanI GGYRCC 1 cut(s) 782
BanII GRGCYC 1 cut(s) 802
BbsI GAAGAC 1 cut(s) 725
Bbv12I GWGCWC 1 cut(s) 519
BccI CCATC 6 cut(s) 32, 336, 674, 1081, 1082, 1303
BceAI ACGGC 4 cut(s) 514, 862, 910, 1159
BciT130I CCWGG 1 cut(s) 556
BclI TGATCA 1 cut(s) 534
BcnI CCSGG 3 cut(s) 437, 581, 1197
BcoDI GTCTC 4 cut(s) 597, 886, 896, 1259
BfaI CTAG 4 cut(s) 90, 1271, 1316, 1324
BfmI CTRYAG 3 cut(s) 131, 332, 591
BfoI RGCGCY 1 cut(s) 374
BglII AGATCT 1 cut(s) 97
BmcAI AGTACT 1 cut(s) 414
Bme1390I CCNGG 4 cut(s) 437, 556, 581, 1197
BmeT110I CYCGRG 3 cut(s) 416, 862, 1262
BmgT120I GGNCC 1 cut(s) 660
BmiI GGNNCC 2 cut(s) 490, 784
BmrFI CCNGG 4 cut(s) 437, 556, 581, 1197
BmrI ACTGGG 1 cut(s) 817
BmsI GCATC 3 cut(s) 385, 394, 1320
BmuI ACTGGG 1 cut(s) 817
BoxI GACNNNNGTC 1 cut(s) 1117
BpiI GAAGAC 1 cut(s) 725
Bpu14I TTCGAA 1 cut(s) 1213
BpuMI CCSGG 3 cut(s) 437, 581, 1197
BsaHI GRCGYC 2 cut(s) 443, 1052
BsaJI CCNNGG 3 cut(s) 423, 863, 1003
BsaXI ACNNNNNCTCC 2 cut(s) 533, 563
Bsc4I CCNNNNNNNGG 7 cut(s) 555, 580, 729, 845, 932, 1177, 1203
Bse118I RCCGGY 1 cut(s) 139
Bse1I ACTGG 1 cut(s) 812
BseBI CCWGG 1 cut(s) 556
BseDI CCNNGG 3 cut(s) 423, 863, 1003
BseGI GGATG 5 cut(s) 24, 685, 1074, 1295, 1311
BseLI CCNNNNNNNGG 7 cut(s) 555, 580, 729, 845, 932, 1177, 1203
BseMII CTCAG 1 cut(s) 974
BseNI ACTGG 1 cut(s) 812
BseRI GAGGAG 2 cut(s) 292, 914
BseYI CCCAGC 1 cut(s) 575
BshFI GGCC 4 cut(s) 460, 662, 868, 1253
BshNI GGYRCC 1 cut(s) 782
BsiHKAI GWGCWC 1 cut(s) 519
BsiHKCI CYCGRG 3 cut(s) 416, 862, 1262
BsiSI CCGG 4 cut(s) 140, 437, 581, 1197
BslFI GGGAC 2 cut(s) 557, 1125
BslI CCNNNNNNNGG 7 cut(s) 555, 580, 729, 845, 932, 1177, 1203
BsmAI GTCTC 4 cut(s) 597, 886, 896, 1259
BsmBI CGTCTC 1 cut(s) 886
BsmFI GGGAC 2 cut(s) 557, 1125
BsnI GGCC 4 cut(s) 460, 662, 868, 1253
BsoBI CYCGRG 3 cut(s) 416, 862, 1262
Bsp119I TTCGAA 1 cut(s) 1213
Bsp1286I GDGCHC 2 cut(s) 519, 802
Bsp143I GATC 7 cut(s) 39, 97, 271, 480, 534, 876, 889
Bsp19I CCATGG 1 cut(s) 423
BspACI CCGC 1 cut(s) 457
BspANI GGCC 4 cut(s) 460, 662, 868, 1253
BspCNI CTCAG 1 cut(s) 975
BspLI GGNNCC 2 cut(s) 490, 784
BspMAI CTGCAG 1 cut(s) 135
BspPI GGATC 1 cut(s) 884
BspQI GCTCTTC 1 cut(s) 1246
BspT104I TTCGAA 1 cut(s) 1213
BspT107I GGYRCC 1 cut(s) 782
BsrFI RCCGGY 1 cut(s) 139
BsrI ACTGG 1 cut(s) 812
BssAI RCCGGY 1 cut(s) 139
BssECI CCNNGG 3 cut(s) 423, 863, 1003
BssMI GATC 7 cut(s) 39, 97, 271, 480, 534, 876, 889
BssNI GRCGYC 2 cut(s) 443, 1052
BssT1I CCWWGG 1 cut(s) 423
Bst2UI CCWGG 1 cut(s) 556
Bst4CI ACNGT 6 cut(s) 269, 451, 592, 617, 647, 935
Bst6I CTCTTC 1 cut(s) 1246
BstACI GRCGYC 2 cut(s) 443, 1052
BstAPI GCANNNNNTGC 2 cut(s) 395, 404
BstBI TTCGAA 1 cut(s) 1213
BstC8I GCNNGC 3 cut(s) 375, 462, 503
BstDEI CTNAG 2 cut(s) 983, 1098
BstDSI CCRYGG 2 cut(s) 423, 1003
BstENI CCTNNNNNAGG 1 cut(s) 553
BstF5I GGATG 5 cut(s) 24, 685, 1074, 1295, 1311
BstH2I RGCGCY 1 cut(s) 374
BstHHI GCGC 1 cut(s) 373
BstKTI GATC 7 cut(s) 42, 100, 274, 483, 537, 879, 892
BstMAI GTCTC 4 cut(s) 597, 886, 896, 1259
BstMBI GATC 7 cut(s) 39, 97, 271, 480, 534, 876, 889
BstMWI GCNNNNNNNGC 9 cut(s) 69, 72, 136, 377, 383, 386, 395, 404, 507
BstNI CCWGG 1 cut(s) 556
BstPAI GACNNNNGTC 1 cut(s) 1117
BstSCI CCNGG 4 cut(s) 435, 554, 579, 1195
BstSFI CTRYAG 3 cut(s) 131, 332, 591
BstV2I GAAGAC 1 cut(s) 725
BstX2I RGATCY 1 cut(s) 97
BstXI CCANNNNNNTGG 1 cut(s) 778
BstYI RGATCY 1 cut(s) 97
BsuRI GGCC 4 cut(s) 460, 662, 868, 1253
BtgI CCRYGG 2 cut(s) 423, 1003
BtgZI GCGATG 1 cut(s) 864
BtsCI GGATG 5 cut(s) 24, 685, 1074, 1295, 1311
BtsIMutI CAGTG 1 cut(s) 805
Cac8I GCNNGC 3 cut(s) 375, 462, 503
CaiI CAGNNNCTG 1 cut(s) 380
CfoI GCGC 1 cut(s) 373
Cfr10I RCCGGY 1 cut(s) 139
Cfr13I GGNCC 1 cut(s) 660
CseI GACGC 2 cut(s) 432, 1041
Csp6I GTAC 6 cut(s) 351, 413, 433, 783, 917, 1105
CviAII CATG 8 cut(s) 180, 295, 424, 532, 766, 857, 1108, 1308
CviQI GTAC 6 cut(s) 351, 413, 433, 783, 917, 1105
DdeI CTNAG 2 cut(s) 983, 1098
DpnI GATC 7 cut(s) 41, 99, 273, 482, 536, 878, 891
DpnII GATC 7 cut(s) 39, 97, 271, 480, 534, 876, 889
EaeI YGGCCR 1 cut(s) 458
Eam1104I CTCTTC 1 cut(s) 1246
EarI CTCTTC 1 cut(s) 1246
Eco130I CCWWGG 1 cut(s) 423
Eco147I AGGCCT 1 cut(s) 868
Eco24I GRGCYC 1 cut(s) 802
Eco32I GATATC 1 cut(s) 112
Eco88I CYCGRG 3 cut(s) 416, 862, 1262
EcoNI CCTNNNNNAGG 1 cut(s) 553
EcoRII CCWGG 1 cut(s) 554
EcoRV GATATC 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 423
EcoT22I ATGCAT 1 cut(s) 1313
EcoT38I GRGCYC 1 cut(s) 802
ErhI CCWWGG 1 cut(s) 423
Esp3I CGTCTC 1 cut(s) 886
FaeI CATG 8 cut(s) 183, 298, 427, 535, 769, 860, 1111, 1311
FaqI GGGAC 2 cut(s) 557, 1125
FatI CATG 8 cut(s) 179, 294, 423, 531, 765, 856, 1107, 1307
FbaI TGATCA 1 cut(s) 534
FblI GTMKAC 1 cut(s) 446
FokI GGATG 5 cut(s) 11, 692, 1061, 1282, 1298
FriOI GRGCYC 1 cut(s) 802
FspBI CTAG 4 cut(s) 90, 1271, 1316, 1324
GlaI GCGC 1 cut(s) 372
GsaI CCCAGC 1 cut(s) 579
HaeII RGCGCY 1 cut(s) 374
HaeIII GGCC 4 cut(s) 460, 662, 868, 1253
HapII CCGG 4 cut(s) 140, 437, 581, 1197
HgaI GACGC 2 cut(s) 432, 1041
HhaI GCGC 1 cut(s) 373
Hin1I GRCGYC 2 cut(s) 443, 1052
Hin1II CATG 8 cut(s) 183, 298, 427, 535, 769, 860, 1111, 1311
Hin6I GCGC 1 cut(s) 371
HinP1I GCGC 1 cut(s) 371
HincII GTYRAC 1 cut(s) 447
HindII GTYRAC 1 cut(s) 447
HinfI GANTC 6 cut(s) 419, 521, 825, 1044, 1094, 1267
HpaII CCGG 4 cut(s) 140, 437, 581, 1197
HphI GGTGA 7 cut(s) 218, 242, 281, 463, 685, 947, 1296
Hpy166II GTNNAC 1 cut(s) 447
Hpy188I TCNGA 5 cut(s) 199, 844, 894, 984, 1012
Hpy188III TCNNGA 4 cut(s) 478, 566, 874, 1264
Hpy8I GTNNAC 1 cut(s) 447
Hpy99I CGWCG 5 cut(s) 448, 451, 488, 644, 822
HpyAV CCTTC 4 cut(s) 233, 797, 849, 1027
HpyCH4III ACNGT 6 cut(s) 269, 451, 592, 617, 647, 935
HpyCH4IV ACGT 1 cut(s) 561
HpyCH4V TGCA 9 cut(s) 4, 133, 389, 398, 407, 495, 1165, 1292, 1311
HpyF10VI GCNNNNNNNGC 9 cut(s) 69, 72, 136, 377, 383, 386, 395, 404, 507
HpyF3I CTNAG 2 cut(s) 983, 1098
HpySE526I ACGT 1 cut(s) 561
Hsp92I GRCGYC 2 cut(s) 443, 1052
Hsp92II CATG 8 cut(s) 183, 298, 427, 535, 769, 860, 1111, 1311
HspAI GCGC 1 cut(s) 371
KpnI GGTACC 1 cut(s) 786
Ksp22I TGATCA 1 cut(s) 534
Kzo9I GATC 7 cut(s) 39, 97, 271, 480, 534, 876, 889
LguI GCTCTTC 1 cut(s) 1246
LmnI GCTCC 3 cut(s) 159, 996, 1059
LweI GCATC 3 cut(s) 385, 394, 1320
MaeI CTAG 4 cut(s) 90, 1271, 1316, 1324
MaeII ACGT 1 cut(s) 561
MaeIII GTNAC 4 cut(s) 216, 691, 929, 935
MalI GATC 7 cut(s) 41, 99, 273, 482, 536, 878, 891
MboI GATC 7 cut(s) 39, 97, 271, 480, 534, 876, 889
MboII GAAGA 8 cut(s) 92, 374, 377, 660, 730, 1096, 1150, 1233
MflI RGATCY 1 cut(s) 97
MhlI GDGCHC 2 cut(s) 519, 802
MluCI AATT 5 cut(s) 123, 206, 685, 1149, 1208
MlyI GAGTC 4 cut(s) 428, 515, 1053, 1261
MmeI TCCRAC 1 cut(s) 222
Mph1103I ATGCAT 1 cut(s) 1313
MseI TTAA 2 cut(s) 186, 792
MslI CAYNNNNRTG 3 cut(s) 255, 258, 1306
MspA1I CMGCKG 3 cut(s) 136, 377, 464
MspI CCGG 4 cut(s) 140, 437, 581, 1197
MspR9I CCNGG 4 cut(s) 437, 556, 581, 1197
MvaI CCWGG 1 cut(s) 556
MwoI GCNNNNNNNGC 9 cut(s) 69, 72, 136, 377, 383, 386, 395, 404, 507
NciI CCSGG 3 cut(s) 437, 581, 1197
NcoI CCATGG 1 cut(s) 423
NdeII GATC 7 cut(s) 39, 97, 271, 480, 534, 876, 889
NlaIII CATG 8 cut(s) 183, 298, 427, 535, 769, 860, 1111, 1311
NlaIV GGNNCC 2 cut(s) 490, 784
NmuCI GTSAC 4 cut(s) 216, 691, 929, 935
NsiI ATGCAT 1 cut(s) 1313
NspV TTCGAA 1 cut(s) 1213
PaeR7I CTCGAG 2 cut(s) 416, 1262
PceI AGGCCT 1 cut(s) 868
PciSI GCTCTTC 1 cut(s) 1246
PfeI GAWTC 2 cut(s) 825, 1094
PflMI CCANNNNNTGG 1 cut(s) 729
PfoI TCCNGGA 1 cut(s) 1195
PleI GAGTC 4 cut(s) 427, 515, 1052, 1261
PpsI GAGTC 4 cut(s) 427, 515, 1052, 1261
PshAI GACNNNNGTC 1 cut(s) 1117
Psp6I CCWGG 1 cut(s) 554
PspFI CCCAGC 1 cut(s) 575
PspGI CCWGG 1 cut(s) 554
PspN4I GGNNCC 2 cut(s) 490, 784
PspPI GGNCC 1 cut(s) 660
PspXI VCTCGAGB 1 cut(s) 416
PstI CTGCAG 1 cut(s) 135
PstNI CAGNNNCTG 1 cut(s) 380
PsuI RGATCY 1 cut(s) 97
PvuII CAGCTG 3 cut(s) 136, 377, 464
RsaI GTAC 6 cut(s) 352, 414, 434, 784, 918, 1106
RsaNI GTAC 6 cut(s) 351, 413, 433, 783, 917, 1105
RseI CAYNNNNRTG 3 cut(s) 255, 258, 1306
SalI GTCGAC 1 cut(s) 445
SapI GCTCTTC 1 cut(s) 1246
SaqAI TTAA 2 cut(s) 186, 792
Sau3AI GATC 7 cut(s) 39, 97, 271, 480, 534, 876, 889
Sau96I GGNCC 1 cut(s) 660
ScaI AGTACT 1 cut(s) 414
SchI GAGTC 4 cut(s) 428, 515, 1053, 1261
ScrFI CCNGG 4 cut(s) 437, 556, 581, 1197
SduI GDGCHC 2 cut(s) 519, 802
SfaNI GCATC 3 cut(s) 385, 394, 1320
SfcI CTRYAG 3 cut(s) 131, 332, 591
Sfr274I CTCGAG 2 cut(s) 416, 1262
SfuI TTCGAA 1 cut(s) 1213
SgrDI CGTCGACG 1 cut(s) 445
SlaI CTCGAG 2 cut(s) 416, 1262
SmiMI CAYNNNNRTG 3 cut(s) 255, 258, 1306
SmlI CTYRAG 2 cut(s) 416, 1262
SmoI CTYRAG 2 cut(s) 416, 1262
Sse9I AATT 5 cut(s) 123, 206, 685, 1149, 1208
SseBI AGGCCT 1 cut(s) 868
SsiI CCGC 1 cut(s) 457
SspMI CTAG 4 cut(s) 90, 1271, 1316, 1324
StuI AGGCCT 1 cut(s) 868
StyD4I CCNGG 4 cut(s) 435, 554, 579, 1195
StyI CCWWGG 1 cut(s) 423
TaaI ACNGT 6 cut(s) 269, 451, 592, 617, 647, 935
TaiI ACGT 1 cut(s) 564
TaqI TCGA 7 cut(s) 274, 417, 446, 519, 820, 1213, 1263
TasI AATT 5 cut(s) 123, 206, 685, 1149, 1208
TatI WGTACW 2 cut(s) 412, 1104
TauI GCSGC 1 cut(s) 460
TfiI GAWTC 2 cut(s) 825, 1094
Tru1I TTAA 2 cut(s) 186, 792
Tru9I TTAA 2 cut(s) 186, 792
TscAI CASTG 1 cut(s) 812
TseFI GTSAC 4 cut(s) 216, 691, 929, 935
Tsp45I GTSAC 4 cut(s) 216, 691, 929, 935
TspDTI ATGAA 4 cut(s) 62, 199, 754, 1046
TspGWI ACGGA 3 cut(s) 146, 806, 911
TspRI CASTG 1 cut(s) 812
Van91I CCANNNNNTGG 1 cut(s) 729
XagI CCTNNNNNAGG 1 cut(s) 553
XapI RAATTY 5 cut(s) 123, 206, 685, 1149, 1208
XhoI CTCGAG 2 cut(s) 416, 1262
XmiI GTMKAC 1 cut(s) 446
XspI CTAG 4 cut(s) 90, 1271, 1316, 1324
ZrmI AGTACT 1 cut(s) 414
Zsp2I ATGCAT 1 cut(s) 1313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.