Rw6G018130

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000113
Physical Location & Seq
Reverse (-)
35878022 .. 35879295
1274 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G018130.1

Sequence Viewer

Length: 1203 bp
ATGGAAACAAGCAGCAGCAGCAGCTCATTTCCCATTGCTAGCAAAGATCTTCCTTGCGATATCATAGAGGAAATTCTGCTGCAGCTGCCGGTCAAGTCGCTGCTCCGTTTCAAATGCGTGAGCAAATCATGGCTTAATCTCATCTCCGACCACAAATTCATCAAGTCACACCTTCACCACTCCACCAAACAACACCCTCACCACGATGATGATGACGGTGATCGAATATCAAACGCACATCTCATGCTCTCCTCAACAACCCTCATTCACTCCCTCCATCTACAGCTATCCAATACTCGTACCAAACAAGAAGAAGAAGCGCCAGCTGCCGCTGCTGCAACTGATGCAGATGATGCAGTAGTACTCGAGTCCATGGTGGAGTACCCGGTGGCGTCGACGGTGAGGCGGCCAGCTGTCAAAGACATCAAGATCGTCGGTTCCTGCAACGGCTTGCTATGCTTGGAAACTGTAGTCGGTAGAGACTACTTTTATGGTTTCGGTTATGATTGTCGCAACGACGACTGTAAAATAGTGAGGGCCACTTCTTCAAGTAGGGATGGAAATTTCGTCACCCAACTTGACATCTTTACTTTGAAGACCAACTCTTGGCGAACAAAAACCAAAACCCTACCCTTTTATTTCATGTCCAGCGTGGTGGGTACCCTTCTTAATGGGGCTCTCCACTGGGCAGTCCGTCGAGGAATCAACATCAGTCCTTCTGACGGCGATGACCATGACCCGAGGCCTTTCGGGATCGTCTCCTTTGATCTGACGGAGGAGACTTACAAAGAAGTACCCCTGCCGTGTGACGGTGACAAGCATTTCTCTTTCTATGGATTGGGGGTTTTAGGAGGGTGTCTGAGTATGCTCCACAGCCCCCACGGGTCTGATTATCAAGTGTGGGTTATGAAGGAATATGGAGTCAAGGCGTCTTGGAGTGTATTCACAACCATCCCACAGAAGATGGAGGATTCTAAGGAGTACATGGGACTGATGTCGCTTTTGTGCGTTTTGAAGAACGGCGAAATTCTAATGATGTTGCACAACCACAAAAAGGTTGTGATATACAATCCCGGACAAAGGAAATTTCGAACCATATTCAATGGGGAAATAGGCTCTTCCCAAGTGGCCTTATACCACGAGACTCTAGTTTCAACAAAAATATATGCACCATCCTCATCACCATGTATCCTAGCTACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

400

Amino Acids

44.6

Weight (kDa)

6.4

Isoelectric Point (pI)

47.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 54 1.1e-09 F-box domain
F-box-like PF12937 16 - 52 1e-05 F-box-like
FBA_1 PF07734 161 - 392 5.8e-21 F-box associated beta propeller domain
FBA_3 PF08268 162 - 375 2e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 659
AccB1I GGYRCC 1 cut(s) 659
AccB7I CCANNNNNTGG 1 cut(s) 606
AccI GTMKAC 1 cut(s) 395
AciI CCGC 2 cut(s) 330, 406
AclWI GGATC 1 cut(s) 761
AcoI YGGCCR 1 cut(s) 407
AcsI RAATTY 5 cut(s) 72, 155, 562, 1026, 1085
AcyI GRCGYC 2 cut(s) 392, 929
AfaI GTAC 6 cut(s) 301, 363, 383, 661, 795, 983
AfiI CCNNNNNNNGG 5 cut(s) 606, 722, 809, 1054, 1080
AgsI TTSAA 6 cut(s) 112, 549, 595, 1015, 1102, 1155
AluBI AGCT 6 cut(s) 24, 85, 286, 326, 413, 1196
AluI AGCT 6 cut(s) 24, 85, 286, 326, 413, 1196
Alw26I GTCTC 4 cut(s) 474, 763, 773, 1136
AlwI GGATC 1 cut(s) 761
Ama87I CYCGRG 2 cut(s) 365, 739
AoxI GGCC 4 cut(s) 407, 537, 743, 1128
ApoI RAATTY 5 cut(s) 72, 155, 562, 1026, 1085
Asp718I GGTACC 1 cut(s) 659
AspLEI GCGC 1 cut(s) 322
AspS9I GGNCC 1 cut(s) 537
AsuC2I CCSGG 2 cut(s) 386, 1074
AsuHPI GGTGA 7 cut(s) 167, 191, 230, 412, 562, 824, 1173
AsuII TTCGAA 1 cut(s) 1090
AsuNHI GCTAGC 1 cut(s) 38
AvaI CYCGRG 2 cut(s) 365, 739
BanI GGYRCC 1 cut(s) 659
BanII GRGCYC 1 cut(s) 679
BauI CACGAG 1 cut(s) 1139
BbsI GAAGAC 1 cut(s) 602
BccI CCATC 5 cut(s) 285, 551, 958, 959, 1180
BceAI ACGGC 4 cut(s) 463, 739, 787, 1036
BciVI GTATCC 1 cut(s) 1199
BcnI CCSGG 2 cut(s) 386, 1074
BcoDI GTCTC 4 cut(s) 474, 763, 773, 1136
BfaI CTAG 4 cut(s) 39, 1148, 1193, 1201
BfmI CTRYAG 3 cut(s) 80, 281, 468
BfoI RGCGCY 1 cut(s) 323
BfuI GTATCC 1 cut(s) 1199
BglII AGATCT 1 cut(s) 46
BmcAI AGTACT 1 cut(s) 363
Bme1390I CCNGG 2 cut(s) 386, 1074
BmeT110I CYCGRG 2 cut(s) 365, 739
BmgT120I GGNCC 1 cut(s) 537
BmiI GGNNCC 2 cut(s) 439, 661
BmrFI CCNGG 2 cut(s) 386, 1074
BmrI ACTGGG 1 cut(s) 694
BmsI GCATC 2 cut(s) 334, 343
BmtI GCTAGC 1 cut(s) 42
BmuI ACTGGG 1 cut(s) 694
BoxI GACNNNNGTC 1 cut(s) 994
BpiI GAAGAC 1 cut(s) 602
Bpu14I TTCGAA 1 cut(s) 1090
BpuMI CCSGG 2 cut(s) 386, 1074
BsaHI GRCGYC 2 cut(s) 392, 929
BsaJI CCNNGG 3 cut(s) 372, 740, 880
Bsc4I CCNNNNNNNGG 5 cut(s) 606, 722, 809, 1054, 1080
Bse118I RCCGGY 1 cut(s) 88
Bse1I ACTGG 1 cut(s) 689
Bse3DI GCAATG 1 cut(s) 33
BseDI CCNNGG 3 cut(s) 372, 740, 880
BseGI GGATG 3 cut(s) 562, 951, 1172
BseLI CCNNNNNNNGG 5 cut(s) 606, 722, 809, 1054, 1080
BseMI GCAATG 1 cut(s) 33
BseMII CTCAG 1 cut(s) 851
BseNI ACTGG 1 cut(s) 689
BseRI GAGGAG 2 cut(s) 241, 791
BshFI GGCC 4 cut(s) 409, 539, 745, 1130
BshNI GGYRCC 1 cut(s) 659
BsiHKCI CYCGRG 2 cut(s) 365, 739
BsiSI CCGG 3 cut(s) 89, 386, 1074
BslFI GGGAC 1 cut(s) 1002
BslI CCNNNNNNNGG 5 cut(s) 606, 722, 809, 1054, 1080
BsmAI GTCTC 4 cut(s) 474, 763, 773, 1136
BsmBI CGTCTC 1 cut(s) 763
BsmFI GGGAC 1 cut(s) 1002
BsnI GGCC 4 cut(s) 409, 539, 745, 1130
BsoBI CYCGRG 2 cut(s) 365, 739
Bsp119I TTCGAA 1 cut(s) 1090
Bsp1286I GDGCHC 1 cut(s) 679
Bsp143I GATC 5 cut(s) 46, 220, 429, 753, 766
Bsp19I CCATGG 1 cut(s) 372
BspACI CCGC 2 cut(s) 330, 406
BspANI GGCC 4 cut(s) 409, 539, 745, 1130
BspCNI CTCAG 1 cut(s) 852
BspLI GGNNCC 2 cut(s) 439, 661
BspMAI CTGCAG 1 cut(s) 84
BspOI GCTAGC 1 cut(s) 42
BspPI GGATC 1 cut(s) 761
BspQI GCTCTTC 1 cut(s) 1123
BspT104I TTCGAA 1 cut(s) 1090
BspT107I GGYRCC 1 cut(s) 659
BsrDI GCAATG 1 cut(s) 33
BsrFI RCCGGY 1 cut(s) 88
BsrI ACTGG 1 cut(s) 689
BssAI RCCGGY 1 cut(s) 88
BssECI CCNNGG 3 cut(s) 372, 740, 880
BssMI GATC 5 cut(s) 46, 220, 429, 753, 766
BssNI GRCGYC 2 cut(s) 392, 929
BssSI CACGAG 1 cut(s) 1139
BssT1I CCWWGG 1 cut(s) 372
Bst2BI CACGAG 1 cut(s) 1139
Bst4CI ACNGT 5 cut(s) 218, 400, 469, 524, 812
Bst6I CTCTTC 1 cut(s) 1123
BstACI GRCGYC 2 cut(s) 392, 929
BstAPI GCANNNNNTGC 2 cut(s) 344, 353
BstBI TTCGAA 1 cut(s) 1090
BstC8I GCNNGC 4 cut(s) 40, 324, 411, 452
BstDEI CTNAG 2 cut(s) 860, 975
BstDSI CCRYGG 2 cut(s) 372, 880
BstF5I GGATG 3 cut(s) 562, 951, 1172
BstH2I RGCGCY 1 cut(s) 323
BstHHI GCGC 1 cut(s) 322
BstKTI GATC 5 cut(s) 49, 223, 432, 756, 769
BstMAI GTCTC 4 cut(s) 474, 763, 773, 1136
BstMBI GATC 5 cut(s) 46, 220, 429, 753, 766
BstMWI GCNNNNNNNGC 9 cut(s) 18, 21, 85, 326, 332, 335, 344, 353, 456
BstPAI GACNNNNGTC 1 cut(s) 994
BstSCI CCNGG 2 cut(s) 384, 1072
BstSFI CTRYAG 3 cut(s) 80, 281, 468
BstV2I GAAGAC 1 cut(s) 602
BstX2I RGATCY 1 cut(s) 46
BstXI CCANNNNNNTGG 1 cut(s) 655
BstYI RGATCY 1 cut(s) 46
BsuI GTATCC 1 cut(s) 1199
BsuRI GGCC 4 cut(s) 409, 539, 745, 1130
BtgI CCRYGG 2 cut(s) 372, 880
BtgZI GCGATG 1 cut(s) 741
BtsCI GGATG 3 cut(s) 562, 951, 1172
BtsIMutI CAGTG 1 cut(s) 682
Cac8I GCNNGC 4 cut(s) 40, 324, 411, 452
CfoI GCGC 1 cut(s) 322
Cfr10I RCCGGY 1 cut(s) 88
Cfr13I GGNCC 1 cut(s) 537
CseI GACGC 2 cut(s) 381, 918
Csp6I GTAC 6 cut(s) 300, 362, 382, 660, 794, 982
CviAII CATG 7 cut(s) 129, 244, 373, 643, 734, 985, 1185
CviQI GTAC 6 cut(s) 300, 362, 382, 660, 794, 982
DdeI CTNAG 2 cut(s) 860, 975
DpnI GATC 5 cut(s) 48, 222, 431, 755, 768
DpnII GATC 5 cut(s) 46, 220, 429, 753, 766
EaeI YGGCCR 1 cut(s) 407
Eam1104I CTCTTC 1 cut(s) 1123
EarI CTCTTC 1 cut(s) 1123
Eco130I CCWWGG 1 cut(s) 372
Eco147I AGGCCT 1 cut(s) 745
Eco24I GRGCYC 1 cut(s) 679
Eco32I GATATC 1 cut(s) 61
Eco88I CYCGRG 2 cut(s) 365, 739
EcoRV GATATC 1 cut(s) 61
EcoT14I CCWWGG 1 cut(s) 372
EcoT38I GRGCYC 1 cut(s) 679
ErhI CCWWGG 1 cut(s) 372
Esp3I CGTCTC 1 cut(s) 763
FaeI CATG 7 cut(s) 132, 247, 376, 646, 737, 988, 1188
FaqI GGGAC 1 cut(s) 1002
FatI CATG 7 cut(s) 128, 243, 372, 642, 733, 984, 1184
FblI GTMKAC 1 cut(s) 395
FokI GGATG 3 cut(s) 569, 938, 1159
FriOI GRGCYC 1 cut(s) 679
FspBI CTAG 4 cut(s) 39, 1148, 1193, 1201
GlaI GCGC 1 cut(s) 321
HaeII RGCGCY 1 cut(s) 323
HaeIII GGCC 4 cut(s) 409, 539, 745, 1130
HapII CCGG 3 cut(s) 89, 386, 1074
HgaI GACGC 2 cut(s) 381, 918
HhaI GCGC 1 cut(s) 322
Hin1I GRCGYC 2 cut(s) 392, 929
Hin1II CATG 7 cut(s) 132, 247, 376, 646, 737, 988, 1188
Hin6I GCGC 1 cut(s) 320
HinP1I GCGC 1 cut(s) 320
HincII GTYRAC 1 cut(s) 396
HindII GTYRAC 1 cut(s) 396
HinfI GANTC 5 cut(s) 368, 702, 921, 971, 1144
HpaII CCGG 3 cut(s) 89, 386, 1074
HphI GGTGA 7 cut(s) 167, 191, 230, 412, 562, 824, 1173
Hpy166II GTNNAC 1 cut(s) 396
Hpy188I TCNGA 5 cut(s) 148, 721, 771, 861, 889
Hpy188III TCNNGA 2 cut(s) 427, 751
Hpy8I GTNNAC 1 cut(s) 396
Hpy99I CGWCG 5 cut(s) 397, 400, 437, 521, 699
HpyAV CCTTC 4 cut(s) 182, 674, 726, 904
HpyCH4III ACNGT 5 cut(s) 218, 400, 469, 524, 812
HpyCH4V TGCA 7 cut(s) 82, 338, 347, 356, 444, 1042, 1169
HpyF10VI GCNNNNNNNGC 9 cut(s) 18, 21, 85, 326, 332, 335, 344, 353, 456
HpyF3I CTNAG 2 cut(s) 860, 975
Hsp92I GRCGYC 2 cut(s) 392, 929
Hsp92II CATG 7 cut(s) 132, 247, 376, 646, 737, 988, 1188
HspAI GCGC 1 cut(s) 320
KpnI GGTACC 1 cut(s) 663
Kzo9I GATC 5 cut(s) 46, 220, 429, 753, 766
LguI GCTCTTC 1 cut(s) 1123
LmnI GCTCC 2 cut(s) 108, 873
LpnPI CCDG 9 cut(s) 102, 336, 399, 423, 454, 661, 670, 812, 1087
LweI GCATC 2 cut(s) 334, 343
MaeI CTAG 4 cut(s) 39, 1148, 1193, 1201
MaeIII GTNAC 4 cut(s) 165, 568, 806, 812
MalI GATC 5 cut(s) 48, 222, 431, 755, 768
MboI GATC 5 cut(s) 46, 220, 429, 753, 766
MboII GAAGA 8 cut(s) 41, 323, 326, 537, 607, 973, 1027, 1110
MflI RGATCY 1 cut(s) 46
MhlI GDGCHC 1 cut(s) 679
MluCI AATT 5 cut(s) 72, 155, 562, 1026, 1085
MlyI GAGTC 3 cut(s) 377, 930, 1138
MmeI TCCRAC 1 cut(s) 171
MseI TTAA 2 cut(s) 135, 669
MslI CAYNNNNRTG 3 cut(s) 204, 207, 1183
MspA1I CMGCKG 4 cut(s) 85, 326, 332, 413
MspI CCGG 3 cut(s) 89, 386, 1074
MspR9I CCNGG 2 cut(s) 386, 1074
MwoI GCNNNNNNNGC 9 cut(s) 18, 21, 85, 326, 332, 335, 344, 353, 456
NciI CCSGG 2 cut(s) 386, 1074
NcoI CCATGG 1 cut(s) 372
NdeII GATC 5 cut(s) 46, 220, 429, 753, 766
NheI GCTAGC 1 cut(s) 38
NlaIII CATG 7 cut(s) 132, 247, 376, 646, 737, 988, 1188
NlaIV GGNNCC 2 cut(s) 439, 661
NmuCI GTSAC 4 cut(s) 165, 568, 806, 812
NspV TTCGAA 1 cut(s) 1090
PaeR7I CTCGAG 1 cut(s) 365
PceI AGGCCT 1 cut(s) 745
PciSI GCTCTTC 1 cut(s) 1123
PfeI GAWTC 2 cut(s) 702, 971
PflMI CCANNNNNTGG 1 cut(s) 606
PfoI TCCNGGA 1 cut(s) 1072
PleI GAGTC 3 cut(s) 376, 929, 1138
PpsI GAGTC 3 cut(s) 376, 929, 1138
PshAI GACNNNNGTC 1 cut(s) 994
PspN4I GGNNCC 2 cut(s) 439, 661
PspPI GGNCC 1 cut(s) 537
PspXI VCTCGAGB 1 cut(s) 365
PstI CTGCAG 1 cut(s) 84
PsuI RGATCY 1 cut(s) 46
PvuII CAGCTG 3 cut(s) 85, 326, 413
RsaI GTAC 6 cut(s) 301, 363, 383, 661, 795, 983
RsaNI GTAC 6 cut(s) 300, 362, 382, 660, 794, 982
RseI CAYNNNNRTG 3 cut(s) 204, 207, 1183
SalI GTCGAC 1 cut(s) 394
SapI GCTCTTC 1 cut(s) 1123
SaqAI TTAA 2 cut(s) 135, 669
Sau3AI GATC 5 cut(s) 46, 220, 429, 753, 766
Sau96I GGNCC 1 cut(s) 537
ScaI AGTACT 1 cut(s) 363
SchI GAGTC 3 cut(s) 377, 930, 1138
ScrFI CCNGG 2 cut(s) 386, 1074
SduI GDGCHC 1 cut(s) 679
SetI ASST 9 cut(s) 26, 87, 174, 288, 328, 415, 1059, 1198, 1202
SfaNI GCATC 2 cut(s) 334, 343
SfcI CTRYAG 3 cut(s) 80, 281, 468
Sfr274I CTCGAG 1 cut(s) 365
SfuI TTCGAA 1 cut(s) 1090
SgrDI CGTCGACG 1 cut(s) 394
SlaI CTCGAG 1 cut(s) 365
SmiMI CAYNNNNRTG 3 cut(s) 204, 207, 1183
SmlI CTYRAG 1 cut(s) 365
SmoI CTYRAG 1 cut(s) 365
Sse9I AATT 5 cut(s) 72, 155, 562, 1026, 1085
SseBI AGGCCT 1 cut(s) 745
SsiI CCGC 2 cut(s) 330, 406
SspMI CTAG 4 cut(s) 39, 1148, 1193, 1201
StuI AGGCCT 1 cut(s) 745
StyD4I CCNGG 2 cut(s) 384, 1072
StyI CCWWGG 1 cut(s) 372
TaaI ACNGT 5 cut(s) 218, 400, 469, 524, 812
TaqI TCGA 5 cut(s) 223, 366, 395, 697, 1090
TasI AATT 5 cut(s) 72, 155, 562, 1026, 1085
TatI WGTACW 2 cut(s) 361, 981
TauI GCSGC 2 cut(s) 332, 409
TfiI GAWTC 2 cut(s) 702, 971
Tru1I TTAA 2 cut(s) 135, 669
Tru9I TTAA 2 cut(s) 135, 669
TscAI CASTG 1 cut(s) 689
TseFI GTSAC 4 cut(s) 165, 568, 806, 812
Tsp45I GTSAC 4 cut(s) 165, 568, 806, 812
TspDTI ATGAA 3 cut(s) 148, 631, 923
TspGWI ACGGA 3 cut(s) 95, 683, 788
TspRI CASTG 1 cut(s) 689
Van91I CCANNNNNTGG 1 cut(s) 606
XapI RAATTY 5 cut(s) 72, 155, 562, 1026, 1085
XhoI CTCGAG 1 cut(s) 365
XmiI GTMKAC 1 cut(s) 395
XspI CTAG 4 cut(s) 39, 1148, 1193, 1201
ZrmI AGTACT 1 cut(s) 363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.