Rroxscaffold_2G00094240

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000113
Physical Location & Seq
Forward (+)
15560867 .. 15563060
2194 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00094240.1

Sequence Viewer

Length: 1179 bp
ATGGGGGACGGCGATGTCGTGCTTAGGCGAGTTCATACCGACTTCGGCGACTACGAGGAAGATGTGATTGCGGAGATCCTGGCAAGGCTGCCGGTCAAATCCTTGATGCGATTCCGGTGCGTCTGCAAGTCATGGCGTGCTTTGATCTCTGATTCGTATTTTGTAAAGAAACACCTCAGCTACGGAGAGAGAGGCATCACCGAGAGCGCTCACAGGCTCATTTTCATGCTGGATCCCCCCTTGGCCTTGGACTATGAAGCCTTGAAAAGTATGAAGGATGATGATTATGGTGATGGTGCTGGTGCTCAGTTTGCAGTCACTCAGCTGGATTTTCCGGTAACGAAATCTATCCCTGATTACGGTTGTAGAGTTGTTGTGGGTTCTTGCAATGGCTTGGTATGTGTAGAAGTTGACGGCGAGGCCATTATGTTATGGAACCCTTGTACTGGAGACTCCAAGGTTTTACCAAAACCTCCTCGAGTTATAAACTCCGAGTTTAGCTACGATTTTAATGGATTCGGGTATGATTCTGCTAGTGACGACTACAAGGTGATACGGGGGTTCGCTGATTATCTTGCTAAGAAAATCATGATTCACATCTTTTCACTGAAAACAGGTTCATGGAGGACTGTCGAAGACATTGATTATGTTGCATTAATAATGCGGCAGGGGTTGTTCTTAAACAGAGCTCTGCATTGGCTATGTACTCTACCCGGGGGCTCAAGAATTTTGTCTTTTGATTTAGAGGCAGAGAAATTTCAGAAGACGATTCCATTACCCTATGATGACTGGTTTTTTGATCTCTTGATTCATAAAAATTGCCTCTGTGTACTTGCTTGTCCAACTGGAACCAACACTTTCAACATATGGATGATGAAAGAATATGGGGTCCAGGAATCCTGGACTGAAGTCTTACAATTTTCTTTGGAGAAGTATGCATCGCATTATGATGATTTTAGATGTTTTTTCACGCCTGTGTGCATTTTAGAGAATGGTGTAGTTTTGATTGACGAGATGGGTGAGCGTCAACAACTCATGGTATTATCTAATCTAATGGAGAAGGAATTCAAGCATGTTGTTGAGGTCGCGAAGAACTTGGAGTTTAGAACAGTCATTTACCGAGAGACATTAGTTTCACCAGACGTCCACACAAACAAAACCAACACTATTTGTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

392

Amino Acids

44.86

Weight (kDa)

5.23

Isoelectric Point (pI)

30.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 56 1.9e-10 F-box domain
F-box-like PF12937 21 - 54 3.7e-07 F-box-like
FBA_3 PF08268 118 - 359 1.8e-22 F-box associated beta propeller domain
FBA_1 PF07734 126 - 362 3.4e-31 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 485
AasI GACNNNNNNGTC 1 cut(s) 14
AatII GACGTC 1 cut(s) 1146
AccII CGCG 1 cut(s) 1088
AciI CCGC 2 cut(s) 71, 664
AclWI GGATC 3 cut(s) 70, 227, 240
AcsI RAATTY 3 cut(s) 726, 755, 1064
AcuI CTGAAG 1 cut(s) 927
AcyI GRCGYC 1 cut(s) 1143
AfaI GTAC 3 cut(s) 445, 706, 831
AfeI AGCGCT 1 cut(s) 208
AfiI CCNNNNNNNGG 2 cut(s) 359, 446
AgsI TTSAA 3 cut(s) 265, 862, 1069
AjnI CCWGG 3 cut(s) 78, 891, 899
AleI CACNNNNGTG 1 cut(s) 974
AluBI AGCT 4 cut(s) 180, 325, 501, 689
AluI AGCT 4 cut(s) 180, 325, 501, 689
Alw21I GWGCWC 2 cut(s) 307, 691
Alw26I GTCTC 2 cut(s) 444, 1118
AlwI GGATC 3 cut(s) 70, 227, 240
Ama87I CYCGRG 2 cut(s) 477, 713
Aor51HI AGCGCT 1 cut(s) 208
AoxI GGCC 2 cut(s) 243, 420
ApeKI GCWGC 1 cut(s) 88
ApoI RAATTY 3 cut(s) 726, 755, 1064
ArsI GACNNNNNNTTYG 2 cut(s) 779, 811
AseI ATTAAT 1 cut(s) 656
Asp700I GAANNNNTTC 1 cut(s) 1064
AspLEI GCGC 1 cut(s) 209
AspS9I GGNCC 1 cut(s) 889
AsuC2I CCSGG 2 cut(s) 714, 715
AsuHPI GGTGA 5 cut(s) 190, 302, 562, 1031, 1128
AvaI CYCGRG 2 cut(s) 477, 713
AvaII GGWCC 1 cut(s) 889
BaeI ACNNNNGTAYC 2 cut(s) 545, 578
BamHI GGATCC 1 cut(s) 232
BanII GRGCYC 2 cut(s) 691, 722
BbsI GAAGAC 2 cut(s) 642, 770
Bbv12I GWGCWC 2 cut(s) 307, 691
BbvCI CCTCAGC 1 cut(s) 176
BbvI GCAGC 1 cut(s) 75
BccI CCATC 2 cut(s) 287, 1009
BceAI ACGGC 2 cut(s) 25, 430
BcgI CGANNNNNNTGC 2 cut(s) 99, 133
BciT130I CCWGG 3 cut(s) 80, 893, 901
BcnI CCSGG 2 cut(s) 714, 715
BcoDI GTCTC 2 cut(s) 444, 1118
BfaI CTAG 1 cut(s) 534
BfoI RGCGCY 1 cut(s) 210
BisI GCNGC 2 cut(s) 89, 665
BlsI GCNGC 2 cut(s) 90, 666
Bme1390I CCNGG 5 cut(s) 80, 714, 715, 893, 901
Bme18I GGWCC 1 cut(s) 889
BmeT110I CYCGRG 2 cut(s) 477, 713
BmgT120I GGNCC 1 cut(s) 889
BmiI GGNNCC 4 cut(s) 234, 437, 850, 890
BmrFI CCNGG 5 cut(s) 80, 714, 715, 893, 901
BmsI GCATC 3 cut(s) 96, 204, 947
BoxI GACNNNNGTC 1 cut(s) 908
BpiI GAAGAC 2 cut(s) 642, 770
BpmI CTGGAG 1 cut(s) 468
Bpu10I CCTNAGC 2 cut(s) 23, 176
BpuEI CTTGAG 1 cut(s) 706
BpuMI CCSGG 2 cut(s) 714, 715
BsaBI GATNNNNATC 1 cut(s) 596
BsaHI GRCGYC 1 cut(s) 1143
BsaJI CCNNGG 5 cut(s) 240, 246, 456, 713, 714
BsaWI WCCGGW 2 cut(s) 114, 334
Bsc4I CCNNNNNNNGG 2 cut(s) 359, 446
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 3 cut(s) 451, 794, 850
Bse3DI GCAATG 1 cut(s) 394
Bse8I GATNNNNATC 1 cut(s) 596
BseBI CCWGG 3 cut(s) 80, 893, 901
BseDI CCNNGG 5 cut(s) 240, 246, 456, 713, 714
BseGI GGATG 2 cut(s) 283, 876
BseJI GATNNNNATC 1 cut(s) 596
BseLI CCNNNNNNNGG 2 cut(s) 359, 446
BseMI GCAATG 1 cut(s) 394
BseMII CTCAG 3 cut(s) 190, 320, 335
BseNI ACTGG 3 cut(s) 451, 794, 850
BseRI GAGGAG 1 cut(s) 465
BseXI GCAGC 1 cut(s) 75
Bsh1236I CGCG 1 cut(s) 1088
BshFI GGCC 2 cut(s) 245, 422
BsiHKAI GWGCWC 2 cut(s) 307, 691
BsiHKCI CYCGRG 2 cut(s) 477, 713
BsiSI CCGG 4 cut(s) 92, 115, 335, 714
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 2 cut(s) 359, 446
BsmAI GTCTC 2 cut(s) 444, 1118
BsmFI GGGAC 1 cut(s) 20
BsnI GGCC 2 cut(s) 245, 422
BsoBI CYCGRG 2 cut(s) 477, 713
Bsp1286I GDGCHC 3 cut(s) 307, 691, 722
Bsp143I GATC 4 cut(s) 75, 144, 232, 799
Bsp68I TCGCGA 1 cut(s) 1088
BspACI CCGC 2 cut(s) 71, 664
BspANI GGCC 2 cut(s) 245, 422
BspCNI CTCAG 3 cut(s) 189, 319, 334
BspFNI CGCG 1 cut(s) 1088
BspHI TCATGA 1 cut(s) 588
BspLI GGNNCC 4 cut(s) 234, 437, 850, 890
BspPI GGATC 3 cut(s) 70, 227, 240
BsrDI GCAATG 1 cut(s) 394
BsrFI RCCGGY 1 cut(s) 91
BsrI ACTGG 3 cut(s) 451, 794, 850
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 5 cut(s) 240, 246, 456, 713, 714
BssMI GATC 4 cut(s) 75, 144, 232, 799
BssNI GRCGYC 1 cut(s) 1143
BssT1I CCWWGG 3 cut(s) 240, 246, 456
Bst2UI CCWGG 3 cut(s) 80, 893, 901
Bst4CI ACNGT 3 cut(s) 362, 631, 1111
BstACI GRCGYC 1 cut(s) 1143
BstC8I GCNNGC 1 cut(s) 138
BstDEI CTNAG 5 cut(s) 23, 176, 306, 321, 579
BstF5I GGATG 2 cut(s) 283, 876
BstFNI CGCG 1 cut(s) 1088
BstH2I RGCGCY 1 cut(s) 210
BstHHI GCGC 1 cut(s) 209
BstKTI GATC 4 cut(s) 78, 147, 235, 802
BstMAI GTCTC 2 cut(s) 444, 1118
BstMBI GATC 4 cut(s) 75, 144, 232, 799
BstMWI GCNNNNNNNGC 1 cut(s) 311
BstNI CCWGG 3 cut(s) 80, 893, 901
BstNSI RCATGY 1 cut(s) 1076
BstPAI GACNNNNGTC 1 cut(s) 908
BstSCI CCNGG 5 cut(s) 78, 712, 713, 891, 899
BstUI CGCG 1 cut(s) 1088
BstV1I GCAGC 1 cut(s) 75
BstV2I GAAGAC 2 cut(s) 642, 770
BstX2I RGATCY 2 cut(s) 75, 232
BstYI RGATCY 2 cut(s) 75, 232
BsuRI GGCC 2 cut(s) 245, 422
BtgZI GCGATG 2 cut(s) 27, 924
BtsCI GGATG 2 cut(s) 283, 876
BtsIMutI CAGTG 1 cut(s) 605
BtuMI TCGCGA 1 cut(s) 1088
Cac8I GCNNGC 1 cut(s) 138
CciI TCATGA 1 cut(s) 588
CfoI GCGC 1 cut(s) 209
Cfr10I RCCGGY 1 cut(s) 91
Cfr13I GGNCC 1 cut(s) 889
Cfr9I CCCGGG 1 cut(s) 713
CseI GACGC 2 cut(s) 109, 1013
Csp6I GTAC 3 cut(s) 444, 705, 830
CviAII CATG 6 cut(s) 132, 226, 589, 621, 1036, 1073
CviQI GTAC 3 cut(s) 444, 705, 830
DdeI CTNAG 5 cut(s) 23, 176, 306, 321, 579
DpnI GATC 4 cut(s) 77, 146, 234, 801
DpnII GATC 4 cut(s) 75, 144, 232, 799
DrdI GACNNNNNNGTC 1 cut(s) 14
DseDI GACNNNNNNGTC 1 cut(s) 14
Ecl136II GAGCTC 1 cut(s) 689
Eco130I CCWWGG 3 cut(s) 240, 246, 456
Eco24I GRGCYC 2 cut(s) 691, 722
Eco47I GGWCC 1 cut(s) 889
Eco47III AGCGCT 1 cut(s) 208
Eco53kI GAGCTC 1 cut(s) 689
Eco57I CTGAAG 1 cut(s) 927
Eco88I CYCGRG 2 cut(s) 477, 713
EcoICRI GAGCTC 1 cut(s) 689
EcoRI GAATTC 1 cut(s) 1064
EcoRII CCWGG 3 cut(s) 78, 891, 899
EcoT14I CCWWGG 3 cut(s) 240, 246, 456
EcoT22I ATGCAT 1 cut(s) 940
EcoT38I GRGCYC 2 cut(s) 691, 722
ErhI CCWWGG 3 cut(s) 240, 246, 456
FaeI CATG 6 cut(s) 135, 229, 592, 624, 1039, 1076
FaqI GGGAC 1 cut(s) 20
FatI CATG 6 cut(s) 131, 225, 588, 620, 1035, 1072
FauNDI CATATG 1 cut(s) 866
Fnu4HI GCNGC 2 cut(s) 89, 665
FokI GGATG 2 cut(s) 290, 883
FriOI GRGCYC 2 cut(s) 691, 722
Fsp4HI GCNGC 2 cut(s) 89, 665
FspBI CTAG 1 cut(s) 534
GlaI GCGC 1 cut(s) 208
GluI GCNGC 2 cut(s) 89, 665
GsuI CTGGAG 1 cut(s) 468
HaeII RGCGCY 1 cut(s) 210
HaeIII GGCC 2 cut(s) 245, 422
HapII CCGG 4 cut(s) 92, 115, 335, 714
HgaI GACGC 2 cut(s) 109, 1013
HhaI GCGC 1 cut(s) 209
Hin1I GRCGYC 1 cut(s) 1143
Hin1II CATG 6 cut(s) 135, 229, 592, 624, 1039, 1076
Hin6I GCGC 1 cut(s) 207
HinP1I GCGC 1 cut(s) 207
HincII GTYRAC 2 cut(s) 412, 1028
HindII GTYRAC 2 cut(s) 412, 1028
HinfI GANTC 9 cut(s) 111, 152, 452, 516, 527, 592, 769, 808, 896
HpaII CCGG 4 cut(s) 92, 115, 335, 714
HphI GGTGA 5 cut(s) 190, 302, 562, 1031, 1128
Hpy166II GTNNAC 4 cut(s) 412, 830, 1028, 1147
Hpy188I TCNGA 3 cut(s) 151, 493, 762
Hpy188III TCNNGA 4 cut(s) 589, 723, 805, 1087
Hpy8I GTNNAC 4 cut(s) 412, 830, 1028, 1147
HpyAV CCTTC 2 cut(s) 268, 1054
HpyCH4III ACNGT 3 cut(s) 362, 631, 1111
HpyCH4IV ACGT 1 cut(s) 1143
HpyCH4V TGCA 7 cut(s) 126, 314, 387, 653, 694, 938, 981
HpyF10VI GCNNNNNNNGC 1 cut(s) 311
HpyF3I CTNAG 5 cut(s) 23, 176, 306, 321, 579
HpySE526I ACGT 1 cut(s) 1143
Hsp92I GRCGYC 1 cut(s) 1143
Hsp92II CATG 6 cut(s) 135, 229, 592, 624, 1039, 1076
HspAI GCGC 1 cut(s) 207
Kzo9I GATC 4 cut(s) 75, 144, 232, 799
Lsp1109I GCAGC 1 cut(s) 75
LweI GCATC 3 cut(s) 96, 204, 947
MaeI CTAG 1 cut(s) 534
MaeII ACGT 1 cut(s) 1143
MaeIII GTNAC 3 cut(s) 316, 337, 536
MalI GATC 4 cut(s) 77, 146, 234, 801
MboI GATC 4 cut(s) 75, 144, 232, 799
MboII GAAGA 4 cut(s) 71, 647, 775, 1102
MflI RGATCY 2 cut(s) 75, 232
MhlI GDGCHC 3 cut(s) 307, 691, 722
MluCI AATT 5 cut(s) 726, 755, 817, 917, 1064
MlyI GAGTC 1 cut(s) 446
MmeI TCCRAC 1 cut(s) 866
Mph1103I ATGCAT 1 cut(s) 940
MroXI GAANNNNTTC 1 cut(s) 1064
MseI TTAA 3 cut(s) 510, 656, 680
MslI CAYNNNNRTG 4 cut(s) 224, 869, 948, 974
MspA1I CMGCKG 1 cut(s) 325
MspI CCGG 4 cut(s) 92, 115, 335, 714
MspR9I CCNGG 5 cut(s) 80, 714, 715, 893, 901
MvaI CCWGG 3 cut(s) 80, 893, 901
MvnI CGCG 1 cut(s) 1088
MwoI GCNNNNNNNGC 1 cut(s) 311
NciI CCSGG 2 cut(s) 714, 715
NdeI CATATG 1 cut(s) 866
NdeII GATC 4 cut(s) 75, 144, 232, 799
NlaIII CATG 6 cut(s) 135, 229, 592, 624, 1039, 1076
NlaIV GGNNCC 4 cut(s) 234, 437, 850, 890
NmuCI GTSAC 2 cut(s) 316, 536
NruI TCGCGA 1 cut(s) 1088
NsiI ATGCAT 1 cut(s) 940
NspI RCATGY 1 cut(s) 1076
OliI CACNNNNGTG 1 cut(s) 974
PaeR7I CTCGAG 1 cut(s) 477
PagI TCATGA 1 cut(s) 588
PcsI WCGNNNNNNNCGW 2 cut(s) 15, 51
PdmI GAANNNNTTC 1 cut(s) 1064
PfeI GAWTC 8 cut(s) 111, 152, 516, 527, 592, 769, 808, 896
PfoI TCCNGGA 2 cut(s) 891, 899
PkrI GCNGC 2 cut(s) 90, 666
PleI GAGTC 1 cut(s) 446
PpsI GAGTC 1 cut(s) 446
PshAI GACNNNNGTC 1 cut(s) 908
PshBI ATTAAT 1 cut(s) 656
PsiI TTATAA 1 cut(s) 485
Psp124BI GAGCTC 1 cut(s) 691
Psp6I CCWGG 3 cut(s) 78, 891, 899
PspGI CCWGG 3 cut(s) 78, 891, 899
PspN4I GGNNCC 4 cut(s) 234, 437, 850, 890
PspPI GGNCC 1 cut(s) 889
PspXI VCTCGAGB 1 cut(s) 477
PsuI RGATCY 2 cut(s) 75, 232
PvuII CAGCTG 1 cut(s) 325
RruI TCGCGA 1 cut(s) 1088
RsaI GTAC 3 cut(s) 445, 706, 831
RsaNI GTAC 3 cut(s) 444, 705, 830
RseI CAYNNNNRTG 4 cut(s) 224, 869, 948, 974
SacI GAGCTC 1 cut(s) 691
SaqAI TTAA 3 cut(s) 510, 656, 680
SatI GCNGC 2 cut(s) 89, 665
Sau3AI GATC 4 cut(s) 75, 144, 232, 799
Sau96I GGNCC 1 cut(s) 889
SchI GAGTC 1 cut(s) 446
ScrFI CCNGG 5 cut(s) 80, 714, 715, 893, 901
SduI GDGCHC 3 cut(s) 307, 691, 722
SfaNI GCATC 3 cut(s) 96, 204, 947
Sfr274I CTCGAG 1 cut(s) 477
SinI GGWCC 1 cut(s) 889
SlaI CTCGAG 1 cut(s) 477
SmaI CCCGGG 1 cut(s) 715
SmiMI CAYNNNNRTG 4 cut(s) 224, 869, 948, 974
SmlI CTYRAG 2 cut(s) 477, 721
SmoI CTYRAG 2 cut(s) 477, 721
Sse9I AATT 5 cut(s) 726, 755, 817, 917, 1064
SsiI CCGC 2 cut(s) 71, 664
SspMI CTAG 1 cut(s) 534
SstI GAGCTC 1 cut(s) 691
StyD4I CCNGG 5 cut(s) 78, 712, 713, 891, 899
StyI CCWWGG 3 cut(s) 240, 246, 456
TaaI ACNGT 3 cut(s) 362, 631, 1111
TaiI ACGT 1 cut(s) 1146
TaqI TCGA 2 cut(s) 478, 633
TasI AATT 5 cut(s) 726, 755, 817, 917, 1064
TatI WGTACW 3 cut(s) 443, 704, 829
TauI GCSGC 1 cut(s) 667
TfiI GAWTC 8 cut(s) 111, 152, 516, 527, 592, 769, 808, 896
Tru1I TTAA 3 cut(s) 510, 656, 680
Tru9I TTAA 3 cut(s) 510, 656, 680
TscAI CASTG 1 cut(s) 612
TseFI GTSAC 2 cut(s) 316, 536
TseI GCWGC 1 cut(s) 88
Tsp45I GTSAC 2 cut(s) 316, 536
TspDTI ATGAA 7 cut(s) 23, 214, 270, 287, 609, 800, 890
TspGWI ACGGA 1 cut(s) 198
TspMI CCCGGG 1 cut(s) 713
TspRI CASTG 1 cut(s) 612
VpaK11BI GGWCC 1 cut(s) 889
VspI ATTAAT 1 cut(s) 656
XapI RAATTY 3 cut(s) 726, 755, 1064
XceI RCATGY 1 cut(s) 1076
XhoI CTCGAG 1 cut(s) 477
XmaI CCCGGG 1 cut(s) 713
XmnI GAANNNNTTC 1 cut(s) 1064
XspI CTAG 1 cut(s) 534
ZraI GACGTC 1 cut(s) 1144
Zsp2I ATGCAT 1 cut(s) 940
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.